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Pregenerated sensors for DUSP21 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025043

Ensembl transcript IDs: ENSMUST00000026018.4

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp AAACCAACCATAGGTCCAAGGTCATTGTTTTTATCTTaGTGTAGGACCCAATCAGGGGAGGAGATGGGTGGA +
Preference number: 3 (lower is better)
Translates to: KPTIGPRSLFLS*CRTQSGEEMGG
Trigger: TCCACCCATCTCCTCCCCTGATTGGGTCCTACATCAAGATAAAAACAATGACCTTGGACCTATGGTTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS-3UTR GCA 90 bp GATATGATAATTAAAAGTTCCAATCCCTTCTCTCCCCTATCTTATACCATCCACCACAGTGCAACAGCGTaGGGCCATTTCTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: DMIIKSSNPFSPLSYTIHHSATA*GHFSFP
Trigger: TGGAAATGAGAAATGGCCGCACGCTGTTGCACTGTG...GTGGATGGTATAAGATAGGGGAGAGAAGGGATTGGAACTTTTAATTATCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS-3UTR GCA 90 bp GATATGATAATTAAAAGTTCCAATCCCTTCTCTCCCCTATCTTATACCATCCACCTTGGTCCATGTGTGTaGATCCAGCAGGGTCATATT +
Preference number: 4 (lower is better)
Translates to: DMIIKSSNPFSPLSYTIHLGPCV*IQQGHI
Trigger: AATATGACCCTGCTGGATGCACACACATGGACCAAG...GTGGATGGTATAAGATAGGGGAGAGAAGGGATTGGAACTTTTAATTATCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS-3UTR GCA 90 bp GAAGATATGATAATTAAAAGTTCCAATCCCTTCTCTCCCCTATCTTATACCATCCGTATTCACTACTTCTaGAGAGACATTGATGATCGT +
Preference number: 4 (lower is better)
Translates to: EDMIIKSSNPFSPLSYTIRIHYF*RDIDDR
Trigger: ACGATCATCAATGTCTCTGCAGAAGTAGTGAATACG...GATGGTATAAGATAGGGGAGAGAAGGGATTGGAACTTTTAATTATCATATCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS TCA 90 bp GGTCATATTGTGGTATTTCATGAGATAGGCAAGGCAGAGAGTTGCTaGGCGGCTCACTCCTGCGGCACAGTGCAACAGCGTGCGGCCATT +
Preference number: 5 (lower is better)
Translates to: GHIVVFHEIGKAESC*AAHSCGTVQQRAAI
Trigger: AATGGCCGCACGCTGTTGCACTGTGCCGCAGGAGTGAGCCGCTCAGCAACTCTCTGCCTTGCCTATCTCATGAAATACCACAATATGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS-3UTR CAA 90 bp GATATGATAATTAAAAGTTCCAATCCCTTCTCTCCCCTATCTTATACCATCCACAGGCAAGGCAGAGAGTaGCTGAGCGGCTCACTCCTG +
Preference number: 5 (lower is better)
Translates to: DMIIKSSNPFSPLSYTIHRQGRE*LSGSLL
Trigger: CAGGAGTGAGCCGCTCAGCAACTCTCTGCCTTGCCT...GTGGATGGTATAAGATAGGGGAGAGAAGGGATTGGAACTTTTAATTATCATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS-3UTR CAA 90 bp GATATGATAATTAAAAGTTCCAATCCCTTCTCTCCCCTATCTTATACCATCCACATGGGGCGGCAGGTCTaGGTCCATGTGTGTGCATCC +
Preference number: 5 (lower is better)
Translates to: DMIIKSSNPFSPLSYTIHMGRQV*VHVCAS
Trigger: GGATGCACACACATGGACCAAGACCTGCCGCCCCAT...GTGGATGGTATAAGATAGGGGAGAGAAGGGATTGGAACTTTTAATTATCATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS GCA 90 bp CACTTGCACGTACTGAATGTCTTCAAAGAACGTATTCACTACTTCTaGAGAGACATTGATGATCGTGGTGATATGGTTGTTGGACAAGGT +
Preference number: 5 (lower is better)
Translates to: HLHVLNVFKERIHYF*RDIDDRGDMVVGQG
Trigger: ACCTTGTCCAACAACCATATCACCACGATCATCAATGTCTCTGCAGAAGTAGTGAATACGTTCTTTGAAGACATTCAGTACGTGCAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS-3UTR CAA 90 bp GAAGATATGATAATTAAAAGTTCCAATCCCTTCTCTCCCCTATCTTATACCATCATCGCTCACCGGCACTaGCACGTACTGAATGTCTTC +
Preference number: 5 (lower is better)
Translates to: EDMIIKSSNPFSPLSYTIIAHRH*HVLNVF
Trigger: GAAGACATTCAGTACGTGCAAGTGCCGGTGAGCGAT...GATGGTATAAGATAGGGGAGAGAAGGGATTGGAACTTTTAATTATCATATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS-3UTR CAA 90 bp GATATGATAATTAAAAGTTCCAATCCCTTCTCTCCCCTATCTTATACCATCCACACTTCTGCAGAGACATaGATGATCGTGGTGATATGG +
Preference number: 5 (lower is better)
Translates to: DMIIKSSNPFSPLSYTIHTSAET*MIVVIW
Trigger: CCATATCACCACGATCATCAATGTCTCTGCAGAAGT...GTGGATGGTATAAGATAGGGGAGAGAAGGGATTGGAACTTTTAATTATCATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS-3UTR CAA 90 bp GATATGATAATTAAAAGTTCCAATCCCTTCTCTCCCCTATCTTATACCATCCACATAGATGTTATCCTGTaGGGTAGCTTGAGACGGAAA +
Preference number: 5 (lower is better)
Translates to: DMIIKSSNPFSPLSYTIHIDVIL*GSLRRK
Trigger: TTTCCGTCTCAAGCTACCCAACAGGATAACATCTAT...GTGGATGGTATAAGATAGGGGAGAGAAGGGATTGGAACTTTTAATTATCATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS-3UTR CAA 90 bp GAAGATATGATAATTAAAAGTTCCAATCCCTTCTCTCCCCTATCTTATACCATCATCGTGGTGATATGGTaGTTGGACAAGGTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: EDMIIKSSNPFSPLSYTIIVVIW*LDKVSL
Trigger: CAAACTCACCTTGTCCAACAACCATATCACCACGAT...GATGGTATAAGATAGGGGAGAGAAGGGATTGGAACTTTTAATTATCATATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS-3UTR CAA 90 bp GAAGATATGATAATTAAAAGTTCCAATCCCTTCTCTCCCCTATCTTATACCATCCTCGTAATGAATCAGTaGTTCCCAAAAGCCATTGTT +
Preference number: 5 (lower is better)
Translates to: EDMIIKSSNPFSPLSYTILVMNQ*FPKAIV
Trigger: AACAATGGCTTTTGGGAACAACTGATTCATTACGAG...GATGGTATAAGATAGGGGAGAGAAGGGATTGGAACTTTTAATTATCATATCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS CAA 72 bp TCTGCAGAGACATTGATGATCGTGGTGATATGGTTGTaGGACAAGGTGAGTTTGTCGTTAGCTACCGCAGAG +
Preference number: 6 (lower is better)
Translates to: SAETLMIVVIWL*DKVSLSLATAE
Trigger: CTCTGCGGTAGCTAACGACAAACTCACCTTGTCCAACAACCATATCACCACGATCATCAATGTCTCTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS CAA 72 bp ATAGAGGTAAGAATTAGGAGCATCGCTCACCGGCACTaGCACGTACTGAATGTCTTCAAAGAACGTATTCAC +
Preference number: 6 (lower is better)
Translates to: IEVRIRSIAHRH*HVLNVFKERIH
Trigger: GTGAATACGTTCTTTGAAGACATTCAGTACGTGCAAGTGCCGGTGAGCGATGCTCCTAATTCTTACCTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS CAA 90 bp GAGACATTGATGATCGTGGTGATATGGTTGTTGGACAAGGTGAGTTaGTCGTTAGCTACCGCAGAGTTACTGATAAAAAGACTGGCAGTT +
Preference number: 6 (lower is better)
Translates to: ETLMIVVIWLLDKVS*SLATAELLIKRLAV
Trigger: AACTGCCAGTCTTTTTATCAGTAACTCTGCGGTAGCTAACGACAAACTCACCTTGTCCAACAACCATATCACCACGATCATCAATGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS CAA 72 bp GGCAGTTATTTGAGAGAGACCATAGATGTTATCCTGTaGGGTAGCTTGAGACGGAAAGATACAAGATGCTGT +
Preference number: 6 (lower is better)
Translates to: GSYLRETIDVIL*GSLRRKDTRCC
Trigger: ACAGCATCTTGTATCTTTCCGTCTCAAGCTACCCAACAGGATAACATCTATGGTCTCTCTCAAATAACTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS CAA 72 bp TACCGCAGAGTTACTGATAAAAAGACTGGCAGTTATTaGAGAGAGACCATAGATGTTATCCTGTTGGGTAGC +
Preference number: 6 (lower is better)
Translates to: YRRVTDKKTGSY*RETIDVILLGS
Trigger: GCTACCCAACAGGATAACATCTATGGTCTCTCTCAAATAACTGCCAGTCTTTTTATCAGTAACTCTGCGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS CAA 72 bp TCTTCAAAGAACGTATTCACTACTTCTGCAGAGACATaGATGATCGTGGTGATATGGTTGTTGGACAAGGTG +
Preference number: 6 (lower is better)
Translates to: SSKNVFTTSAET*MIVVIWLLDKV
Trigger: CACCTTGTCCAACAACCATATCACCACGATCATCAATGTCTCTGCAGAAGTAGTGAATACGTTCTTTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4
CDS GCA 72 bp GTACTGAATGTCTTCAAAGAACGTATTCACTACTTCTaGAGAGACATTGATGATCGTGGTGATATGGTTGTT +
Preference number: 6 (lower is better)
Translates to: VLNVFKERIHYF*RDIDDRGDMVV
Trigger: AACAACCATATCACCACGATCATCAATGTCTCTGCAGAAGTAGTGAATACGTTCTTTGAAGACATTCAGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026018.4