Pregenerated sensors for DUSP19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027001Ensembl transcript IDs: ENSMUST00000028384.5
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | AGTTTCCTTCCAAAACACAGGCAAGAGGACAGAGTCTaGTGCAGAAGTCGTTTGCCTCTGCTGGAGTACAGA | + |
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Preference number: 3 (lower is better) Translates to: SFLPKHRQEDRV*CRSRLPLLEYR Trigger: TCTGTACTCCAGCAGAGGCAAACGACTTCTGCATCAGACTCTGTCCTCTTGCCTGTGTTTTGGAAGGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR GCA 90 bp | CAGGCAAGAGGACAGAGTCTGATGCAGAAGTCGTTTGCCTCTGCTGGAGTACAGGTCACCCTGGTGCACTaGTTCCTGAGATTATCCCGG | + |
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Preference number: 4 (lower is better) Translates to: QARGQSLMQKSFASAGVQVTLVH*FLRLSR Trigger: CCGGGATAATCTCAGGAAGCAGTGCACCAGGGTGAC...CTGTACTCCAGCAGAGGCAAACGACTTCTGCATCAGACTCTGTCCTCTTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR TCA 90 bp | CAGGCAAGAGGACAGAGTCTGATGCAGAAGTCGTTTGCCTCTGCTGGAGTACAGTCTGTCTCCACAACATaGACTGTGGCATCTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QARGQSLMQKSFASAGVQSVSTT*TVASSQ Trigger: CTGGGAAGATGCCACAGTTCATGTTGTGGAGACAGA...CTGTACTCCAGCAGAGGCAAACGACTTCTGCATCAGACTCTGTCCTCTTGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR GCA 90 bp | CAGGCAAGAGGACAGAGTCTGATGCAGAAGTCGTTTGCCTCTGCTGGAGTACAGCTTTGTCACCTCCATTaGTCTCCTTGCCTACTTGGT | + |
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Preference number: 4 (lower is better) Translates to: QARGQSLMQKSFASAGVQLCHLH*SPCLLG Trigger: ACCAAGTAGGCAAGGAGAGCAATGGAGGTGACAAAG...CTGTACTCCAGCAGAGGCAAACGACTTCTGCATCAGACTCTGTCCTCTTGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR GCA 90 bp | CAGGCAAGAGGACAGAGTCTGATGCAGAAGTCGTTTGCCTCTGCTGGAGTACAGTTAATAACGCCAACTTaGAGGTCCAAGGTAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QARGQSLMQKSFASAGVQLITPT*RSKVRS Trigger: GGACCTTACCTTGGACCTGCAAGTTGGCGTTATTAA...CTGTACTCCAGCAGAGGCAAACGACTTCTGCATCAGACTCTGTCCTCTTGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR CCA 90 bp | CAGGCAAGAGGACAGAGTCTGATGCAGAAGTCGTTTGCCTCTGCTGGAGTACAGATTCGGACATATGGATaGTCTCGCCTCTTTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: QARGQSLMQKSFASAGVQIRTYG*SRLFHQ Trigger: TTGGTGAAAGAGGCGAGACCATCCATATGTCCGAAT...CTGTACTCCAGCAGAGGCAAACGACTTCTGCATCAGACTCTGTCCTCTTGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR TCA 90 bp | AAAGGGAAGTTTTCCAAGTTTCCTTCCAAAACACAGGCAAGAGGACAGAGTCTGTGGTGCACTGCTTCCTaGGATTATCCCGGGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: KGKFSKFPSKTQARGQSLWCTAS*DYPGRM Trigger: CATTCTCCCGGGATAATCTCAGGAAGCAGTGCACCA...CAGACTCTGTCCTCTTGCCTGTGTTTTGGAAGGAAACTTGGAAAACTTCCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR TCA 90 bp | AGTTCATCACTTCAAAGGTTCTCAGGTCAGAAAGCATATGAGAAAAGAAGGGGTAGTAGCTCCAGGTCATaGGCAGCATCCTGTGACCCC | + |
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Preference number: 4 (lower is better) Translates to: SSSLQRFSGQKAYEKRRGSSSRS*AASCDP Trigger: GGGGTCACAGGATGCTGCTCATGACCTGGAGCTACT...ACCCCTTCTTTTCTCATATGCTTTCTGACCTGAGAACCTTTGAAGTGATGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR CCA 90 bp | AAAGGGAAGTTTTCCAAGTTTCCTTCCAAAACACAGGCAAGAGGACAGAGTCTGTCTTTCCAGTTAGCGTaGTCACCCTGGTGCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: KGKFSKFPSKTQARGQSLSFQLA*SPWCTA Trigger: AGCAGTGCACCAGGGTGACCACGCTAACTGGAAAGA...CAGACTCTGTCCTCTTGCCTGTGTTTTGGAAGGAAACTTGGAAAACTTCCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR CCA 90 bp | AGTTCATCACTTCAAAGGTTCTCAGGTCAGAAAGCATATGAGAAAAGAAGGGGTAACCACCCCCACCGCTaGGCTCTGTCTCCACAACAT | + |
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Preference number: 4 (lower is better) Translates to: SSSLQRFSGQKAYEKRRGNHPHR*ALSPQH Trigger: ATGTTGTGGAGACAGAGCCCAGCGGTGGGGGTGGTT...ACCCCTTCTTTTCTCATATGCTTTCTGACCTGAGAACCTTTGAAGTGATGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR TCA 90 bp | CAGGCAAGAGGACAGAGTCTGATGCAGAAGTCGTTTGCCTCTGCTGGAGTACAGCTCCATATGCAACATTaGGAATATGAGTCACCTTAT | + |
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Preference number: 4 (lower is better) Translates to: QARGQSLMQKSFASAGVQLHMQH*EYESPY Trigger: ATAAGGTGACTCATATTCTCAATGTTGCATATGGAG...CTGTACTCCAGCAGAGGCAAACGACTTCTGCATCAGACTCTGTCCTCTTGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR GCA 90 bp | CAGGCAAGAGGACAGAGTCTGATGCAGAAGTCGTTTGCCTCTGCTGGAGTACAGGCCATCCTTCAGTTTTaGTTGCTCAATAAACTCAAA | + |
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Preference number: 4 (lower is better) Translates to: QARGQSLMQKSFASAGVQAILQF*LLNKLK Trigger: TTTGAGTTTATTGAGCAAGCAAAACTGAAGGATGGC...CTGTACTCCAGCAGAGGCAAACGACTTCTGCATCAGACTCTGTCCTCTTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR CCA 90 bp | CAGGCAAGAGGACAGAGTCTGATGCAGAAGTCGTTTGCCTCTGCTGGAGTACAGAATAAGACAGGATATTaGTTTCAGGCACATCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: QARGQSLMQKSFASAGVQNKTGY*FQAHPV Trigger: TACTGGATGTGCCTGAAACCAATATCCTGTCTTATT...CTGTACTCCAGCAGAGGCAAACGACTTCTGCATCAGACTCTGTCCTCTTGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR TCA 90 bp | AGTTCATCACTTCAAAGGTTCTCAGGTCAGAAAGCATATGAGAAAAGAAGGGGTACGACAGGGCAGTGGTaGAAGTGGCTTCTTCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: SSSLQRFSGQKAYEKRRGTTGQW*KWLLQN Trigger: GTTCTGAAGAAGCCACTTTCACCACTGCCCTGTCGT...ACCCCTTCTTTTCTCATATGCTTTCTGACCTGAGAACCTTTGAAGTGATGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR GCA 90 bp | AGTTCATCACTTCAAAGGTTCTCAGGTCAGAAAGCATATGAGAAAAGAAGGGGTACACCTGCATTACAGTaGACGAGAACCACGCCATCC | + |
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Preference number: 4 (lower is better) Translates to: SSSLQRFSGQKAYEKRRGTPALQ*TRTTPS Trigger: GGATGGCGTGGTTCTCGTGCACTGTAATGCAGGTGT...ACCCCTTCTTTTCTCATATGCTTTCTGACCTGAGAACCTTTGAAGTGATGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR TCA 90 bp | AGTTCATCACTTCAAAGGTTCTCAGGTCAGAAAGCATATGAGAAAAGAAGGGGTCCCGGGAGAATGCTTTaGTTTCTTGGTTCAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SSSLQRFSGQKAYEKRRGPGRML*FLGSGS Trigger: ACTCCCTGAACCAAGAAATCAAAGCATTCTCCCGGG...ACCCCTTCTTTTCTCATATGCTTTCTGACCTGAGAACCTTTGAAGTGATGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR GCA 90 bp | AGTTCATCACTTCAAAGGTTCTCAGGTCAGAAAGCATATGAGAAAAGAAGGGGTAGCCCTGGAAACACCTaGATTACAGTGCACGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: SSSLQRFSGQKAYEKRRGSPGNT*ITVHEN Trigger: GTTCTCGTGCACTGTAATGCAGGTGTTTCCAGGGCT...ACCCCTTCTTTTCTCATATGCTTTCTGACCTGAGAACCTTTGAAGTGATGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR CCA 90 bp | AAAGGGAAGTTTTCCAAGTTTCCTTCCAAAACACAGGCAAGAGGACAGAGTCTGCCACAACATGAACTGTaGCATCTTCCCAGGTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: KGKFSKFPSKTQARGQSLPQHEL*HLPRFL Trigger: TAGAAACCTGGGAAGATGCCACAGTTCATGTTGTGG...CAGACTCTGTCCTCTTGCCTGTGTTTTGGAAGGAAACTTGGAAAACTTCCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR TCA 90 bp | AGTTCATCACTTCAAAGGTTCTCAGGTCAGAAAGCATATGAGAAAAGAAGGGGTGCAACATTGAGAATATaGGTCACCTTATGCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SSSLQRFSGQKAYEKRRGATLRI*VTLCFL Trigger: GAGAAAGCATAAGGTGACTCATATTCTCAATGTTGC...ACCCCTTCTTTTCTCATATGCTTTCTGACCTGAGAACCTTTGAAGTGATGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR GCA 90 bp | AGTTCATCACTTCAAAGGTTCTCAGGTCAGAAAGCATATGAGAAAAGAAGGGGTATTATCCCGGGAGAATaGTTTGATTTCTTGGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SSSLQRFSGQKAYEKRRGIIPGE*FDFLVQ Trigger: CTGAACCAAGAAATCAAAGCATTCTCCCGGGATAAT...ACCCCTTCTTTTCTCATATGCTTTCTGACCTGAGAACCTTTGAAGTGATGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS CCA 90 bp | GTAGGTGCGGAGTTGTTCCATGAAGCCAGGATTCGGACATATGGATaGTCTCGCCTCTTTCACCAACGACAGGGCAGTGGTGAAAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: VGAELFHEARIRTYG*SRLFHQRQGSGESG Trigger: GCCACTTTCACCACTGCCCTGTCGTTGGTGAAAGAGGCGAGACCATCCATATGTCCGAATCCTGGCTTCATGGAACAACTCCGCACCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS TCA 90 bp | CTCCATTGCTCTCCTTGCCTACTTGGTAGGTGCGGAGTTGTTCCATaGAGCCAGGATTCGGACATATGGATGGTCTCGCCTCTTTCACCA | + |
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Preference number: 5 (lower is better) Translates to: LHCSPCLLGRCGVVP*SQDSDIWMVSPLSP Trigger: TGGTGAAAGAGGCGAGACCATCCATATGTCCGAATCCTGGCTTCATGGAACAACTCCGCACCTACCAAGTAGGCAAGGAGAGCAATGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS GCA 90 bp | ACTCATGAGGAAGCCAATGACAATTGCAGCAGCCCTGGAAACACCTaGATTACAGTGCACGAGAACCACGCCATCCTTCAGTTTTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: THEEANDNCSSPGNT*ITVHENHAILQFCL Trigger: CAAGCAAAACTGAAGGATGGCGTGGTTCTCGTGCACTGTAATGCAGGTGTTTCCAGGGCTGCTGCAATTGTCATTGGCTTCCTCATGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS GCA 90 bp | GGTGAAAGTGGCTTCTTCAGAACTCATGAGGAAGCCAATGACAATTaGAGCAGCCCTGGAAACACCTGCATTACAGTGCACGAGAACCAC | + |
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Preference number: 5 (lower is better) Translates to: GESGFFRTHEEANDN*SSPGNTCITVHENH Trigger: GTGGTTCTCGTGCACTGTAATGCAGGTGTTTCCAGGGCTGCTGCAATTGTCATTGGCTTCCTCATGAGTTCTGAAGAAGCCACTTTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR CAA 90 bp | AGTTCATCACTTCAAAGGTTCTCAGGTCAGAAAGCATATGAGAAAAGAAGGGGTTCCTCCGCGGGCACTTaGTCACCTCCATTGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SSSLQRFSGQKAYEKRRGSSAGT*SPPLLS Trigger: GGAGAGCAATGGAGGTGACAAAGTGCCCGCGGAGGA...ACCCCTTCTTTTCTCATATGCTTTCTGACCTGAGAACCTTTGAAGTGATGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS GCA 90 bp | AAGCCAATGACAATTGCAGCAGCCCTGGAAACACCTGCATTACAGTaGACGAGAACCACGCCATCCTTCAGTTTTGCTTGCTCAATAAAC | + |
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Preference number: 5 (lower is better) Translates to: KPMTIAAALETPALQ*TRTTPSFSFACSIN Trigger: GTTTATTGAGCAAGCAAAACTGAAGGATGGCGTGGTTCTCGTGCACTGTAATGCAGGTGTTTCCAGGGCTGCTGCAATTGTCATTGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR CAA 90 bp | AGTTCATCACTTCAAAGGTTCTCAGGTCAGAAAGCATATGAGAAAAGAAGGGGTGCTCTCCTTGCCTACTaGGTAGGTGCGGAGTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: SSSLQRFSGQKAYEKRRGALLAY*VGAELF Trigger: GAACAACTCCGCACCTACCAAGTAGGCAAGGAGAGC...ACCCCTTCTTTTCTCATATGCTTTCTGACCTGAGAACCTTTGAAGTGATGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR CAA 90 bp | AAAGGGAAGTTTTCCAAGTTTCCTTCCAAAACACAGGCAAGAGGACAGAGTCTGACTTTGTCACCTCCATaGCTCTCCTTGCCTACTTGG | + |
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Preference number: 5 (lower is better) Translates to: KGKFSKFPSKTQARGQSLTLSPP*LSLPTW Trigger: CCAAGTAGGCAAGGAGAGCAATGGAGGTGACAAAGT...CAGACTCTGTCCTCTTGCCTGTGTTTTGGAAGGAAACTTGGAAAACTTCCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS GCA 90 bp | GTTTCTATAAGTTTCTTTCCAGTTAGCGTGGTCACCCTGGTGCACTaGTTCCTGAGATTATCCCGGGAGAATGCTTTGATTTCTTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: VSISFFPVSVVTLVH*FLRLSRENALISWF Trigger: GAACCAAGAAATCAAAGCATTCTCCCGGGATAATCTCAGGAAGCAGTGCACCAGGGTGACCACGCTAACTGGAAAGAAACTTATAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS-3UTR CAA 90 bp | AGTTCATCACTTCAAAGGTTCTCAGGTCAGAAAGCATATGAGAAAAGAAGGGGTCTTAATAACGCCAACTaGCAGGTCCAAGGTAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: SSSLQRFSGQKAYEKRRGLNNAN*QVQGKV Trigger: GACCTTACCTTGGACCTGCAAGTTGGCGTTATTAAG...ACCCCTTCTTTTCTCATATGCTTTCTGACCTGAGAACCTTTGAAGTGATGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS GCA 72 bp | CGGTCGTGTCCTCCGCGGGCACTTTGTCACCTCCATTaGTCTCCTTGCCTACTTGGTAGGTGCGGAGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: RSCPPRALCHLH*SPCLLGRCGVV Trigger: AACAACTCCGCACCTACCAAGTAGGCAAGGAGAGCAATGGAGGTGACAAAGTGCCCGCGGAGGACACGACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS CAA 90 bp | GTCCTCCGCGGGCACTTTGTCACCTCCATTGCTCTCCTTGCCTACTaGGTAGGTGCGGAGTTGTTCCATGAAGCCAGGATTCGGACATAT | + |
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Preference number: 6 (lower is better) Translates to: VLRGHFVTSIALLAY*VGAELFHEARIRTY Trigger: ATATGTCCGAATCCTGGCTTCATGGAACAACTCCGCACCTACCAAGTAGGCAAGGAGAGCAATGGAGGTGACAAAGTGCCCGCGGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS TCA 72 bp | TCTCCTTGCCTACTTGGTAGGTGCGGAGTTGTTCCATaGAGCCAGGATTCGGACATATGGATGGTCTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: SPCLLGRCGVVP*SQDSDIWMVSP Trigger: AGGCGAGACCATCCATATGTCCGAATCCTGGCTTCATGGAACAACTCCGCACCTACCAAGTAGGCAAGGAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS CCA 72 bp | GAGTTGTTCCATGAAGCCAGGATTCGGACATATGGATaGTCTCGCCTCTTTCACCAACGACAGGGCAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: ELFHEARIRTYG*SRLFHQRQGSG Trigger: ACCACTGCCCTGTCGTTGGTGAAAGAGGCGAGACCATCCATATGTCCGAATCCTGGCTTCATGGAACAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS CAA 72 bp | GGGCACTTTGTCACCTCCATTGCTCTCCTTGCCTACTaGGTAGGTGCGGAGTTGTTCCATGAAGCCAGGATT | + |
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Preference number: 6 (lower is better) Translates to: GHFVTSIALLAY*VGAELFHEARI Trigger: AATCCTGGCTTCATGGAACAACTCCGCACCTACCAAGTAGGCAAGGAGAGCAATGGAGGTGACAAAGTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS CAA 90 bp | TTTGTCACCTCCATTGCTCTCCTTGCCTACTTGGTAGGTGCGGAGTaGTTCCATGAAGCCAGGATTCGGACATATGGATGGTCTCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: FVTSIALLAYLVGAE*FHEARIRTYGWSRL Trigger: GAGGCGAGACCATCCATATGTCCGAATCCTGGCTTCATGGAACAACTCCGCACCTACCAAGTAGGCAAGGAGAGCAATGGAGGTGACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS GCA 72 bp | ACAATTGCAGCAGCCCTGGAAACACCTGCATTACAGTaGACGAGAACCACGCCATCCTTCAGTTTTGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: TIAAALETPALQ*TRTTPSFSFAC Trigger: GCAAGCAAAACTGAAGGATGGCGTGGTTCTCGTGCACTGTAATGCAGGTGTTTCCAGGGCTGCTGCAATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS CAA 72 bp | TCCATTGCTCTCCTTGCCTACTTGGTAGGTGCGGAGTaGTTCCATGAAGCCAGGATTCGGACATATGGATGG | + |
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Preference number: 6 (lower is better) Translates to: SIALLAYLVGAE*FHEARIRTYGW Trigger: CCATCCATATGTCCGAATCCTGGCTTCATGGAACAACTCCGCACCTACCAAGTAGGCAAGGAGAGCAATGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS GCA 72 bp | GGCTTCTTCAGAACTCATGAGGAAGCCAATGACAATTaGAGCAGCCCTGGAAACACCTGCATTACAGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: GFFRTHEEANDN*SSPGNTCITVH Trigger: GTGCACTGTAATGCAGGTGTTTCCAGGGCTGCTGCAATTGTCATTGGCTTCCTCATGAGTTCTGAAGAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS GCA 72 bp | AGTTTCTTTCCAGTTAGCGTGGTCACCCTGGTGCACTaGTTCCTGAGATTATCCCGGGAGAATGCTTTGATT | + |
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Preference number: 6 (lower is better) Translates to: SFFPVSVVTLVH*FLRLSRENALI Trigger: AATCAAAGCATTCTCCCGGGATAATCTCAGGAAGCAGTGCACCAGGGTGACCACGCTAACTGGAAAGAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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| CDS GCA 72 bp | TGTAAACTCACTGAGGAAAGCATTTTCAACTCCATATaGAACATTGAGAATATGAGTCACCTTATGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: CKLTEESIFNSI*NIENMSHLMLS Trigger: AGAAAGCATAAGGTGACTCATATTCTCAATGTTGCATATGGAGTTGAAAATGCTTTCCTCAGTGAGTTTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028384.5 |
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