Pregenerated sensors for DUSP18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047205Ensembl transcript IDs: ENSMUST00000055931.5, ENSMUST00000109996.8
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCATCTCCGGGAGGGCTGCAGGAACCCCAGCTTGCCATATGCACTaGGCACTGGTTCCTATGACCCAGCACCATCTGCCAGCTCCACCC | + |
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Preference number: 1 (lower is better) Translates to: VISGRAAGTPACHMH*ALVPMTQHHLPAPP Trigger: GGGTGGAGCTGGCAGATGGTGCTGGGTCATAGGAACCAGTGCCCAGTGCATATGGCAAGCTGGGGTTCCTGCAGCCCTCCCGGAGATGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR GCA 90 bp | GTTTCTGGGTTGGTCATCTCCGGGAGGGCTGCAGGAACCCCAGCTTaGCATATGCACTGGGCACTGGTTCCTATGACCCAGCACCATCTG | + |
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Preference number: 1 (lower is better) Translates to: VSGLVISGRAAGTPA*HMHWALVPMTQHHL Trigger: CAGATGGTGCTGGGTCATAGGAACCAGTGCCCAGTGCATATGGCAAGCTGGGGTTCCTGCAGCCCTCCCGGAGATGACCAACCCAGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR GCA 90 bp | GCACACTGCAGGCCGCACATACCGAGCATCAGCAAACCCATAGGATaGACACAGGCAGGCACATGCTCACCAGAGGCTGTGGTAGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: AHCRPHIPSISKPIG*TQAGTCSPEAVVGL Trigger: CAACCCTACCACAGCCTCTGGTGAGCATGTGCCTGCCTGTGTGCATCCTATGGGTTTGCTGATGCTCGGTATGTGCGGCCTGCAGTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR CCA 90 bp | GGAGATGGGCTTCTTGATGTGAGAGGGTCTAGTCCACCATGGTTGTaGCTACCTGGGCAGGTGGCACTGAGCAAGTCACGGGGAGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: GDGLLDVRGSSPPWL*LPGQVALSKSRGAS Trigger: GCTTGCTCCCCGTGACTTGCTCAGTGCCACCTGCCCAGGTAGCCACAACCATGGTGGACTAGACCCTCTCACATCAAGAAGCCCATCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR CCA 90 bp | GGCAGGCACATGCTCACCAGAGGCTGTGGTAGGGTTGGGCTGGGTTaGGGTCTGACCACAAATGGGACCCAAAACAGGATCGTTTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: GRHMLTRGCGRVGLG*GLTTNGTQNRIVWA Trigger: TGCCCAAACGATCCTGTTTTGGGTCCCATTTGTGGTCAGACCCCAACCCAGCCCAACCCTACCACAGCCTCTGGTGAGCATGTGCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR TCA 90 bp | CTCACAGTCCTCACAGCTCCTCAACAGTCAGCCAGCCTGGGACCCTaGGTCTCATGGTCTGCAATTCTGCACGCGGTCTTGTGTCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: LTVLTAPQQSASLGP*VSWSAILHAVLCQD Trigger: GTCCTGACACAAGACCGCGTGCAGAATTGCAGACCATGAGACTCAGGGTCCCAGGCTGGCTGACTGTTGAGGAGCTGTGAGGACTGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR GCA 90 bp | ATGGTCTGCAATTCTGCACGCGGTCTTGTGTCAGGACTCTCAGGTTaGAAAGTGAGAACTCTGGAGGCGGCTTCTCGGATGAGGCCTAGC | + |
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Preference number: 1 (lower is better) Translates to: MVCNSARGLVSGLSG*KVRTLEAASRMRPS Trigger: GCTAGGCCTCATCCGAGAAGCCGCCTCCAGAGTTCTCACTTTGCAACCTGAGAGTCCTGACACAAGACCGCGTGCAGAATTGCAGACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR GCA 90 bp | AGCTCCTCAACAGTCAGCCAGCCTGGGACCCTGAGTCTCATGGTCTaGAATTCTGCACGCGGTCTTGTGTCAGGACTCTCAGGTTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: SSSTVSQPGTLSLMV*NSARGLVSGLSGCK Trigger: TTTGCAACCTGAGAGTCCTGACACAAGACCGCGTGCAGAATTGCAGACCATGAGACTCAGGGTCCCAGGCTGGCTGACTGTTGAGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR CCA 90 bp | ACTTGTTCCTCACAGTCCTCACAGCTCCTCAACAGTCAGCCAGCCTaGGACCCTGAGTCTCATGGTCTGCAATTCTGCACGCGGTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: TCSSQSSQLLNSQPA*DPESHGLQFCTRSC Trigger: ACAAGACCGCGTGCAGAATTGCAGACCATGAGACTCAGGGTCCCAGGCTGGCTGACTGTTGAGGAGCTGTGAGGACTGTGAGGAACAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR CCA 90 bp | GCAAAGAGACAGACCGGTGCTCAAGGCTACACAGCCTGGGCTACCTaGGAGCAGGGCTTAAACCAAACCAACCCAAACCAAGCCTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: AKRQTGAQGYTAWAT*EQGLNQTNPNQAFL Trigger: CAAGAAGGCTTGGTTTGGGTTGGTTTGGTTTAAGCCCTGCTCCCAGGTAGCCCAGGCTGTGTAGCCTTGAGCACCGGTCTGTCTCTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR GCA 90 bp | AACAGTCAGCCAGCCTGGGACCCTGAGTCTCATGGTCTGCAATTCTaGACGCGGTCTTGTGTCAGGACTCTCAGGTTGCAAAGTGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: NSQPAWDPESHGLQF*TRSCVRTLRLQSEN Trigger: GTTCTCACTTTGCAACCTGAGAGTCCTGACACAAGACCGCGTGCAGAATTGCAGACCATGAGACTCAGGGTCCCAGGCTGGCTGACTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR TCA 90 bp | CCCAAACCAAGCCTTCTTGAATCAGACCCTAACACCAAGGGCTTCTaGGCAGCCCTGAATCTCAGGCTTGCTAGAGACAACTCACTTGTT | + |
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Preference number: 1 (lower is better) Translates to: PKPSLLESDPNTKGF*AALNLRLARDNSLV Trigger: AACAAGTGAGTTGTCTCTAGCAAGCCTGAGATTCAGGGCTGCTCAGAAGCCCTTGGTGTTAGGGTCTGATTCAAGAAGGCTTGGTTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR GCA 90 bp | TCTAGCTGGCAATCTTTACGACAAACAGTAATTGTGCTGGAATTCTaGAGGAGGTGTCAACCAGCTTCCTGTTCCTTTTCATGGCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: SSWQSLRQTVIVLEF*RRCQPASCSFSWPQ Trigger: CTGGGGCCATGAAAAGGAACAGGAAGCTGGTTGACACCTCCTGCAGAATTCCAGCACAATTACTGTTTGTCGTAAAGATTGCCAGCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR CCA 90 bp | GTGGACTTGTTGGGAGGGAGGCAGGATGAGGGCGCTAGGAGGAACTaGCACACAGATCCTATAAATGTGTATTTTCCAAAAATACAGTTT | + |
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Preference number: 1 (lower is better) Translates to: VDLLGGRQDEGARRN*HTDPINVYFPKIQF Trigger: AAACTGTATTTTTGGAAAATACACATTTATAGGATCTGTGTGCCAGTTCCTCCTAGCGCCCTCATCCTGCCTCCCTCCCAACAAGTCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR CCA 90 bp | TATCTTAAGGCTGTTGTCACATCAACTCATCAACTCAACTCATACTaGGTAAACATACTTATCCACCTGCTCTTGCGGGAGGAGCTATTG | + |
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Preference number: 1 (lower is better) Translates to: YLKAVVTSTHQLNSY*VNILIHLLLREELL Trigger: CAATAGCTCCTCCCGCAAGAGCAGGTGGATAAGTATGTTTACCCAGTATGAGTTGAGTTGATGAGTTGATGTGACAACAGCCTTAAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR TCA 90 bp | GGAGGAGCTATTGGCGCTGATGGCTACAGAGGGAGGGAGGCCATCCTCCTTTGGCTGGGCAGGTGGCACTaGGCAAGTCACGGGGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: GGAIGADGYRGREAILLWLGRWH*ASHGEQ Trigger: TTGCTCCCCGTGACTTGCTCAGTGCCACCTGCCCAG...CCAAAGGAGGATGGCCTCCCTCCCTCTGTAGCCATCAGCGCCAATAGCTCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCCATCCTCCTTTGGCGACTCGGCCACTGGTAAGGTGCCCACACCCTAGCCTGAGGTTACAGGCATaGACCACCAAACCTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GGHPPLATRPLVRCPHPSLRLQA*TTKPGW Trigger: CCAGCCAGGTTTGGTGGTGCATGCCTGTAACCTCAG...GCTAGGGTGTGGGCACCTTACCAGTGGCCGAGTCGCCAAAGGAGGATGGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAGCTATTGGCGCTGATGGCTACAGAGGGAGGGAGGCCATCCTCCTTTGGGCCACTATGCGGTGCTaGGAATCAAACCCCAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: GGAIGADGYRGREAILLWATMRC*ESNPRS Trigger: GGACCTGGGGTTTGATTCCCAGCACCGCATAGTGGC...CCAAAGGAGGATGGCCTCCCTCCCTCTGTAGCCATCAGCGCCAATAGCTCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR CAA 90 bp | TGTTTCTGGGTTGGTCATCTCCGGGAGGGCTGCAGGAACCCCAGCTaGCCATATGCACTGGGCACTGGTTCCTATGACCCAGCACCATCT | + |
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Preference number: 2 (lower is better) Translates to: CFWVGHLREGCRNPS*PYALGTGSYDPAPS Trigger: AGATGGTGCTGGGTCATAGGAACCAGTGCCCAGTGCATATGGCAAGCTGGGGTTCCTGCAGCCCTCCCGGAGATGACCAACCCAGAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR GCA 90 bp | ATTGGCGCTGATGGCTACAGAGGGAGGGAGGCCATCCTCCTTTGGCGACTCGGCGTGTGCTTCATTGAGTaGAGTGTAGCACAGCCACAC | + |
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Preference number: 2 (lower is better) Translates to: IGADGYRGREAILLWRLGVCFIE*SVAQPH Trigger: GTGTGGCTGTGCTACACTGCACTCAATGAAGCACAC...GCCGAGTCGCCAAAGGAGGATGGCCTCCCTCCCTCTGTAGCCATCAGCGCCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR GCA 90 bp | ATTGGCGCTGATGGCTACAGAGGGAGGGAGGCCATCCTCCTTTGGCGACTCGGCAAGCACCATCTGCTGTaGTCCTGCAGCAACAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: IGADGYRGREAILLWRLGKHHLL*SCSNKS Trigger: ACTTTTGTTGCTGCAGGAGCACAGCAGATGGTGCTT...GCCGAGTCGCCAAAGGAGGATGGCCTCCCTCCCTCTGTAGCCATCAGCGCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR CAA 90 bp | TACTGGGTAAACATACTTATCCACCTGCTCTTGCGGGAGGAGCTATaGGCGCTGATGGCTACAGAGGGAGGGAGGCCATCCTCCTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: YWVNILIHLLLREEL*ALMATEGGRPSSFG Trigger: GCCAAAGGAGGATGGCCTCCCTCCCTCTGTAGCCATCAGCGCCAATAGCTCCTCCCGCAAGAGCAGGTGGATAAGTATGTTTACCCAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR CAA 90 bp | GCCTCTGAAAGAACCAGGTGGGATTTTGGCAGATTTGTTTCTGGGTaGGTCATCTCCGGGAGGGCTGCAGGAACCCCAGCTTGCCATATG | + |
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Preference number: 2 (lower is better) Translates to: ASERTRWDFGRFVSG*VISGRAAGTPACHM Trigger: CATATGGCAAGCTGGGGTTCCTGCAGCCCTCCCGGAGATGACCAACCCAGAAACAAATCTGCCAAAATCCCACCTGGTTCTTTCAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCCTATGACCCAGCACCATCTGCCAGCTCCACCCTACCACTCACAGAAAAGTCTGAGGTTACAGGCATaGACCACCAAACCTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VPMTQHHLPAPPYHSQKSLRLQA*TTKPGW Trigger: CCAGCCAGGTTTGGTGGTGCATGCCTGTAACCTCAG...ACTTTTCTGTGAGTGGTAGGGTGGAGCTGGCAGATGGTGCTGGGTCATAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR GCA 90 bp | GATGTTAAGAACAAAACAAGGTGGACTTGTTGGGAGGGAGGCAGGATGAGGGCGGCAGGAACCCCAGCTTaGCATATGCACTGGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: DVKNKTRWTCWEGGRMRAAGTPA*HMHWAL Trigger: CAGTGCCCAGTGCATATGGCAAGCTGGGGTTCCTGC...CGCCCTCATCCTGCCTCCCTCCCAACAAGTCCACCTTGTTTTGTTCTTAACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR CAA 90 bp | CTTCAGGATTTGCCTCTGAAAGAACCAGGTGGGATTTTGGCAGATTaGTTTCTGGGTTGGTCATCTCCGGGAGGGCTGCAGGAACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LQDLPLKEPGGILAD*FLGWSSPGGLQEPQ Trigger: CTGGGGTTCCTGCAGCCCTCCCGGAGATGACCAACCCAGAAACAAATCTGCCAAAATCCCACCTGGTTCTTTCAGAGGCAAATCCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTGGTAGGGTTGGGCTGGGTTGGGGTCTGACCACAAATGGGACCCAAAACTTCAGGATTTGCCTCTaGAAGAACCAGGTGGGATTT | + |
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Preference number: 2 (lower is better) Translates to: GCGRVGLGWGLTTNGTQNFRICL*KNQVGF Trigger: AAATCCCACCTGGTTCTTTCAGAGGCAAATCCTGAA...GTTTTGGGTCCCATTTGTGGTCAGACCCCAACCCAGCCCAACCCTACCACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTGGGACCCTGAGTCTCATGGTCTGCAATTCTGCACGCGGTCTTGTGTCACATCTGCTGTGCTCCTaGAGCAACAAAAGTCGAAGT | + |
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Preference number: 2 (lower is better) Translates to: QPGTLSLMVCNSARGLVSHLLCS*SNKSRS Trigger: ACTTCGACTTTTGTTGCTGCAGGAGCACAGCAGATG...TGACACAAGACCGCGTGCAGAATTGCAGACCATGAGACTCAGGGTCCCAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTGGTAGGGTTGGGCTGGGTTGGGGTCTGACCACAAATGGGACCCAAAACATATGTAGCCTAGGCTaGCCTCAAACTCACCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: GCGRVGLGWGLTTNGTQNICSLG*PQTHLV Trigger: TACAAGGTGAGTTTGAGGCCAGCCTAGGCTACATAT...GTTTTGGGTCCCATTTGTGGTCAGACCCCAACCCAGCCCAACCCTACCACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAGCTATTGGCGCTGATGGCTACAGAGGGAGGGAGGCCATCCTCCTTTGGTCCCCCAAGATGCTTTaGGTGAGTTTATACCACAAA | + |
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Preference number: 2 (lower is better) Translates to: GGAIGADGYRGREAILLWSPKML*VSLYHK Trigger: TTTGTGGTATAAACTCACCCAAAGCATCTTGGGGGA...CCAAAGGAGGATGGCCTCCCTCCCTCTGTAGCCATCAGCGCCAATAGCTCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR CCA 90 bp | GATGTTAAGAACAAAACAAGGTGGACTTGTTGGGAGGGAGGCAGGATGAGGGCGGCTTGCCATATGCACTaGGCACTGGTTCCTATGACC | + |
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Preference number: 2 (lower is better) Translates to: DVKNKTRWTCWEGGRMRAACHMH*ALVPMT Trigger: GGTCATAGGAACCAGTGCCCAGTGCATATGGCAAGC...CGCCCTCATCCTGCCTCCCTCCCAACAAGTCCACCTTGTTTTGTTCTTAACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGCAATCTTTACGACAAACAGTAATTGTGCTGGAATTCTGCAGGAGGTGTGGGCACTGGTTCCTATaGCCCAGCACCATCTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SWQSLRQTVIVLEFCRRCGHWFL*PSTICQ Trigger: CTGGCAGATGGTGCTGGGTCATAGGAACCAGTGCCC...ACACCTCCTGCAGAATTCCAGCACAATTACTGTTTGTCGTAAAGATTGCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR CCA 90 bp | GATGTTAAGAACAAAACAAGGTGGACTTGTTGGGAGGGAGGCAGGATGAGGGCGGCACTAAGTCTAGGCTaGACAAGGTGGCACATACCT | + |
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Preference number: 2 (lower is better) Translates to: DVKNKTRWTCWEGGRMRAALSLG*TRWHIP Trigger: AGGTATGTGCCACCTTGTCCAGCCTAGACTTAGTGC...CGCCCTCATCCTGCCTCCCTCCCAACAAGTCCACCTTGTTTTGTTCTTAACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTATGACCCAGCACCATCTGCCAGCTCCACCCTACCACTCACAGAAAAGTATATGTAGCCTAGGCTaGCCTCAAACTCACCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: VPMTQHHLPAPPYHSQKSICSLG*PQTHLV Trigger: TACAAGGTGAGTTTGAGGCCAGCCTAGGCTACATAT...ACTTTTCTGTGAGTGGTAGGGTGGAGCTGGCAGATGGTGCTGGGTCATAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGGGCATCTCAGAGTCATGGTTAAGTCTCTCCCCACTCCACCAGTCCTCCAGTGTGACTTCTAGCTaGCAATCTTTACGACAAACA | + |
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Preference number: 2 (lower is better) Translates to: WLGISESWLSLSPLHQSSSVTSS*QSLRQT Trigger: TGTTTGTCGTAAAGATTGCCAGCTAGAAGTCACACT...GGAGGACTGGTGGAGTGGGGAGAGACTTAACCATGACTCTGAGATGCCCAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR CAA 90 bp | GCTGGGTTGGGGTCTGACCACAAATGGGACCCAAAACAGGATCGTTaGGGCAGTAGAACTGCTGGAGTCCTGATTTGTGATAAATATGTG | + |
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Preference number: 2 (lower is better) Translates to: AGLGSDHKWDPKQDR*GSRTAGVLICDKYV Trigger: CACATATTTATCACAAATCAGGACTCCAGCAGTTCTACTGCCCAAACGATCCTGTTTTGGGTCCCATTTGTGGTCAGACCCCAACCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR TCA 90 bp | CAAATAAACCCTTTCCTCCCCCAAGATGCTTTGGGTGAGTTTATACCACAAAAAGGGCACTGGTTCCTATaGCCCAGCACCATCTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: QINPFLPQDALGEFIPQKGHWFL*PSTICQ Trigger: CTGGCAGATGGTGCTGGGTCATAGGAACCAGTGCCC...TTTTTGTGGTATAAACTCACCCAAAGCATCTTGGGGGAGGAAAGGGTTTATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTACTCTAGGAGACGAGAAAAGGGCAACAGATTCTTTGGTACTAGAACCATAAGGCGGCTTCTCGGATaGGGCCTAGCAGAGATCAAG | + |
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Preference number: 2 (lower is better) Translates to: WYSRRREKGNRFFGTRTIRRLLG*GLAEIK Trigger: CTTGATCTCTGCTAGGCCTCATCCGAGAAGCCGCCT...TATGGTTCTAGTACCAAAGAATCTGTTGCCCTTTTCTCGTCTCCTAGAGTACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCAGCACCAACTGGATCCAGGGTATTGATGTTAAGAACAAAACAAGGTGGGGCCTTAGGGTAGGATaGCCCAGAGAACTGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: TGSTNWIQGIDVKNKTRWGLRVG*PRELSS Trigger: TGAACTCAGTTCTCTGGGTCATCCTACCCTAAGGCC...CCACCTTGTTTTGTTCTTAACATCAATACCCTGGATCCAGTTGGTGCTGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGCAATCTTTACGACAAACAGTAATTGTGCTGGAATTCTGCAGGAGGTGTCAGACCTTGGTGTACTaGAGTTACTGGTGGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SWQSLRQTVIVLEFCRRCQTLVY*SYWWAG Trigger: GCCAGCCCACCAGTAACTCCAGTACACCAAGGTCTG...ACACCTCCTGCAGAATTCCAGCACAATTACTGTTTGTCGTAAAGATTGCCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR TCA 90 bp | GACAAGGTGGCACATACCTGTGAACCCAGCATTCCTAAAGTACAGGCAAAGAGACTTTTTCTGGCGTCATaGAAAGCACCATCTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: DKVAHTCEPSIPKVQAKRLFLAS*KAPSAV Trigger: CACAGCAGATGGTGCTTTTCATGACGCCAGAAAAAG...TCTCTTTGCCTGTACTTTAGGAATGCTGGGTTCACAGGTATGTGCCACCTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTGAGAGACATCCAAGAGCACCAGGAAGCTTCAGGATTTGCCTCTGAAAGACTTTTTCTGGCGTCATaGAAAGCACCATCTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: TLRDIQEHQEASGFASERLFLAS*KAPSAV Trigger: CACAGCAGATGGTGCTTTTCATGACGCCAGAAAAAG...TCTTTCAGAGGCAAATCCTGAAGCTTCCTGGTGCTCTTGGATGTCTCTCAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR GCA 90 bp | CAAATAAACCCTTTCCTCCCCCAAGATGCTTTGGGTGAGTTTATACCACAAAAACCCCAGCTTGCCATATaGACTGGGCACTGGTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: QINPFLPQDALGEFIPQKPQLAI*TGHWFL Trigger: TAGGAACCAGTGCCCAGTGCATATGGCAAGCTGGGG...TTTTTGTGGTATAAACTCACCCAAAGCATCTTGGGGGAGGAAAGGGTTTATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATAAACCCTTTCCTCCCCCAAGATGCTTTGGGTGAGTTTATACCACAAAAACAGACCTTGGTGTACTaGAGTTACTGGTGGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: QINPFLPQDALGEFIPQKQTLVY*SYWWAG Trigger: GCCAGCCCACCAGTAACTCCAGTACACCAAGGTCTG...TTTTTGTGGTATAAACTCACCCAAAGCATCTTGGGGGAGGAAAGGGTTTATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCAGCACCAACTGGATCCAGGGTATTGATGTTAAGAACAAAACAAGGTGGTACTGCATGTGTGCCTaGTACTCTAGGAGACGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TGSTNWIQGIDVKNKTRWYCMCA*YSRRRE Trigger: TTCTCGTCTCCTAGAGTACCAGGCACACATGCAGTA...CCACCTTGTTTTGTTCTTAACATCAATACCCTGGATCCAGTTGGTGCTGCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
||
| 3UTR-3UTR CCA 90 bp | ACCACTGGGATCCAAGCACTGTGTGAATCTGATCTAGAAAACCAGAATTGGGCCAACCAGGTGGGATTTTaGCAGATTTGTTTCTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: TTGIQALCESDLENQNWANQVGF*QICFWV Trigger: AACCCAGAAACAAATCTGCCAAAATCCCACCTGGTT...GGCCCAATTCTGGTTTTCTAGATCAGATTCACACAGTGCTTGGATCCCAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAAATAAACCCTTTCCTCCCCCAAGATGCTTTGGGTGAGTTTATACCACAAGCACTAAGTCTAGGCTaGACAAGGTGGCACATACCT | + |
|
Preference number: 2 (lower is better) Translates to: SQINPFLPQDALGEFIPQALSLG*TRWHIP Trigger: AGGTATGTGCCACCTTGTCCAGCCTAGACTTAGTGC...TTGTGGTATAAACTCACCCAAAGCATCTTGGGGGAGGAAAGGGTTTATTTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAAATAAACCCTTTCCTCCCCCAAGATGCTTTGGGTGAGTTTATACCACAATCAGGACTCTCAGGTTaGAAAGTGAGAACTCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SQINPFLPQDALGEFIPQSGLSG*KVRTLE Trigger: CTCCAGAGTTCTCACTTTGCAACCTGAGAGTCCTGA...TTGTGGTATAAACTCACCCAAAGCATCTTGGGGGAGGAAAGGGTTTATTTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCAACTCATCAACTCAACTCATACTGGGTAAACATACTTATCCACCTGCTCTTAGCAAACCCATAGGATaGACACAGGCAGGCACATGC | + |
|
Preference number: 2 (lower is better) Translates to: INSSTQLILGKHTYPPALSKPIG*TQAGTC Trigger: GCATGTGCCTGCCTGTGTGCATCCTATGGGTTTGCT...AAGAGCAGGTGGATAAGTATGTTTACCCAGTATGAGTTGAGTTGATGAGTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
||
| 3UTR-3UTR GCA 90 bp | CAAATAAACCCTTTCCTCCCCCAAGATGCTTTGGGTGAGTTTATACCACAAAAAAAGCACCATCTGCTGTaGTCCTGCAGCAACAAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: QINPFLPQDALGEFIPQKKHHLL*SCSNKS Trigger: ACTTTTGTTGCTGCAGGAGCACAGCAGATGGTGCTT...TTTTTGTGGTATAAACTCACCCAAAGCATCTTGGGGGAGGAAAGGGTTTATTTG 43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGCCTACCTCATACCAGGCTCTCCATTAGACTGTTACAGTGTTTGTCAGTGTGACTGCGAGGTTAAATaGTATAGCAACACTTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: PAYLIPGSPLDCYSVCQCDCEVK*YSNTFS Trigger: AGAAAAAGTGTTGCTATAGCATTTAACCTCGCAGTC...ACACTGACAAACACTGTAACAGTCTAATGGAGAGCCTGGTATGAGGTAGGCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCAACTCATCAACTCAACTCATACTGGGTAAACATACTTATCCACCTGCTCTTCATCTGCTGTGCTCCTaGAGCAACAAAAGTCGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: INSSTQLILGKHTYPPALHLLCS*SNKSRS Trigger: ACTTCGACTTTTGTTGCTGCAGGAGCACAGCAGATG...AAGAGCAGGTGGATAAGTATGTTTACCCAGTATGAGTTGAGTTGATGAGTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR TCA 90 bp | ACAGTAAGTTCTCATAGTCACCGAGCCTCCACCTCCAAATGTTTTCTTTTAATGAGCCACATTCCTTCATaGCAGAGTGTAACATGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: TVSSHSHRASTSKCFLLMSHIPS*QSVTCK Trigger: CTTACATGTTACACTCTGTCATGAAGGAATGTGGCT...CATTAAAAGAAAACATTTGGAGGTGGAGGCTCGGTGACTATGAGAACTTACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAAATAAACCCTTTCCTCCCCCAAGATGCTTTGGGTGAGTTTATACCACAATCTGAAAGAACCAGGTaGGATTTTGGCAGATTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SQINPFLPQDALGEFIPQSERTR*DFGRFV Trigger: AACAAATCTGCCAAAATCCCACCTGGTTCTTTCAGA...TTGTGGTATAAACTCACCCAAAGCATCTTGGGGGAGGAAAGGGTTTATTTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR TCA 72 bp | CCCCAGCTTGCCATATGCACTGGGCACTGGTTCCTATaGCCCAGCACCATCTGCCAGCTCCACCCTACCACT | + |
|
Preference number: 3 (lower is better) Translates to: PQLAICTGHWFL*PSTICQLHPTT Trigger: AGTGGTAGGGTGGAGCTGGCAGATGGTGCTGGGTCATAGGAACCAGTGCCCAGTGCATATGGCAAGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR GCA 72 bp | TTGGTCATCTCCGGGAGGGCTGCAGGAACCCCAGCTTaGCATATGCACTGGGCACTGGTTCCTATGACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LVISGRAAGTPA*HMHWALVPMTQ Trigger: CTGGGTCATAGGAACCAGTGCCCAGTGCATATGGCAAGCTGGGGTTCCTGCAGCCCTCCCGGAGATGACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR TCA 72 bp | CTCACAGCTCCTCAACAGTCAGCCAGCCTGGGACCCTaGGTCTCATGGTCTGCAATTCTGCACGCGGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LTAPQQSASLGP*VSWSAILHAVL Trigger: CAAGACCGCGTGCAGAATTGCAGACCATGAGACTCAGGGTCCCAGGCTGGCTGACTGTTGAGGAGCTGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR TCA 72 bp | CCAGAGGCTGTGGTAGGGTTGGGCTGGGTTGGGGTCTaGCCACAAATGGGACCCAAAACAGGATCGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PEAVVGLGWVGV*PQMGPKTGSFG Trigger: CCCAAACGATCCTGTTTTGGGTCCCATTTGTGGTCAGACCCCAACCCAGCCCAACCCTACCACAGCCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
||
| 3UTR GCA 72 bp | AGGCCGCACATACCGAGCATCAGCAAACCCATAGGATaGACACAGGCAGGCACATGCTCACCAGAGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RPHIPSISKPIG*TQAGTCSPEAV Trigger: CACAGCCTCTGGTGAGCATGTGCCTGCCTGTGTGCATCCTATGGGTTTGCTGATGCTCGGTATGTGCGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
||
| 3UTR GCA 72 bp | CCAGCCTGGGACCCTGAGTCTCATGGTCTGCAATTCTaGACGCGGTCTTGTGTCAGGACTCTCAGGTTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PAWDPESHGLQF*TRSCVRTLRLQ Trigger: TTGCAACCTGAGAGTCCTGACACAAGACCGCGTGCAGAATTGCAGACCATGAGACTCAGGGTCCCAGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR GCA 72 bp | ACAGTCAGCCAGCCTGGGACCCTGAGTCTCATGGTCTaGAATTCTGCACGCGGTCTTGTGTCAGGACTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TVSQPGTLSLMV*NSARGLVSGLS Trigger: TGAGAGTCCTGACACAAGACCGCGTGCAGAATTGCAGACCATGAGACTCAGGGTCCCAGGCTGGCTGACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR GCA 72 bp | ATCAGCAAACCCATAGGATGCACACAGGCAGGCACATaGTCACCAGAGGCTGTGGTAGGGTTGGGCTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: ISKPIGCTQAGT*SPEAVVGLGWV Trigger: AACCCAGCCCAACCCTACCACAGCCTCTGGTGAGCATGTGCCTGCCTGTGTGCATCCTATGGGTTTGCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR CCA 72 bp | GATGGGCTTCTTGATGTGAGAGGGTCTAGTCCACCATaGTTGTGGCTACCTGGGCAGGTGGCACTGAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: DGLLDVRGSSPP*LWLPGQVALSK Trigger: CTTGCTCAGTGCCACCTGCCCAGGTAGCCACAACCATGGTGGACTAGACCCTCTCACATCAAGAAGCCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR CCA 72 bp | ATGCTCACCAGAGGCTGTGGTAGGGTTGGGCTGGGTTaGGGTCTGACCACAAATGGGACCCAAAACAGGATC | + |
|
Preference number: 3 (lower is better) Translates to: MLTRGCGRVGLG*GLTTNGTQNRI Trigger: GATCCTGTTTTGGGTCCCATTTGTGGTCAGACCCCAACCCAGCCCAACCCTACCACAGCCTCTGGTGAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR CCA 72 bp | TGCAGGAGGTGTCAACCAGCTTCCTGTTCCTTTTCATaGCCCCAGAGTAGGAAGAATGTAGGCGCTGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CRRCQPASCSFS*PQSRKNVGAGG Trigger: CCCTCCAGCGCCTACATTCTTCCTACTCTGGGGCCATGAAAAGGAACAGGAAGCTGGTTGACACCTCCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
||
| 3UTR GCA 72 bp | AATTCTGCACGCGGTCTTGTGTCAGGACTCTCAGGTTaGAAAGTGAGAACTCTGGAGGCGGCTTCTCGGATG | + |
|
Preference number: 3 (lower is better) Translates to: NSARGLVSGLSG*KVRTLEAASRM Trigger: CATCCGAGAAGCCGCCTCCAGAGTTCTCACTTTGCAACCTGAGAGTCCTGACACAAGACCGCGTGCAGAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR CCA 72 bp | TCTTTCCAACACATGTGGCTGGGCATCTCAGAGTCATaGTTAAGTCTCTCCCCACTCCACCAGTCCTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SFQHMWLGISES*LSLSPLHQSSP Trigger: AGGGGAGGACTGGTGGAGTGGGGAGAGACTTAACCATGACTCTGAGATGCCCAGCCACATGTGTTGGAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR GCA 72 bp | TTTGGTACTAGAACCATAGACAGTTGTGGGCCACTATaGGGTGCTGGGAATCAAACCCCAGGTCCTCGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FGTRTIDSCGPL*GAGNQTPGPRE Trigger: TTCCCGAGGACCTGGGGTTTGATTCCCAGCACCGCATAGTGGCCCACAACTGTCTATGGTTCTAGTACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGGGGGACCCCGAGAACAGTGTGATGCCATGTATGAAGCTGCTGTAACACAACCAAACCAAGCCTTCTaGAATCAGACCCTAACACCA | + |
|
Preference number: 3 (lower is better) Translates to: GGGPREQCDAMYEAAVTQPNQAF*NQTLTP Trigger: TGGTGTTAGGGTCTGATTCAAGAAGGCTTGGTTTGG...TTGTGTTACAGCAGCTTCATACATGGCATCACACTGTTCTCGGGGTCCCCCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR CAA 90 bp | ACAGGCAGCACCAACTGGATCCAGGGTATTGATGTTAAGAACAAAACAAGGTGGTCTAGTCCACCATGGTaGTGGCTACCTGGGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TGSTNWIQGIDVKNKTRWSSPPW*WLPGQV Trigger: CACCTGCCCAGGTAGCCACAACCATGGTGGACTAGA...CCACCTTGTTTTGTTCTTAACATCAATACCCTGGATCCAGTTGGTGCTGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR TCA 72 bp | AGCCTTCTTGAATCAGACCCTAACACCAAGGGCTTCTaGGCAGCCCTGAATCTCAGGCTTGCTAGAGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLLESDPNTKGF*AALNLRLARDN Trigger: GTTGTCTCTAGCAAGCCTGAGATTCAGGGCTGCTCAGAAGCCCTTGGTGTTAGGGTCTGATTCAAGAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGACAACTCACTTGTTCCTCACAGTCCTCACAGCTCCTCAACAGTCAGCCAGGAACCAGGTGGGATTTaGGCAGATTTGTTTCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RDNSLVPHSPHSSSTVSQEPGGI*ADLFLG Trigger: ACCCAGAAACAAATCTGCCAAAATCCCACCTGGTTC...CTGGCTGACTGTTGAGGAGCTGTGAGGACTGTGAGGAACAAGTGAGTTGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR CCA 72 bp | TCTCCATTAGACTGTTACAGTGTTTGTCAGTGTAACTaGAGTCACCTGGGACAAGGGACCCTCCACGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SPLDCYSVCQCN*SHLGQGTLHGD Trigger: ATCTCCGTGGAGGGTCCCTTGTCCCAGGTGACTCCAGTTACACTGACAAACACTGTAACAGTCTAATGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR TCA 72 bp | TTGAAGACCCCTAATCTAGCAGGCTGGCACTTACATTaGGAGACATCCAAGAGCACCAGGAAGCTTCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LKTPNLAGWHLH*ETSKSTRKLQD Trigger: ATCCTGAAGCTTCCTGGTGCTCTTGGATGTCTCTCAATGTAAGTGCCAGCCTGCTAGATTAGGGGTCTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR TCA 72 bp | CAATCCCCTAAAACAGACAACTCAGGTGTGCTTCATTaGGTGCAGTGTAGCACAGCCACACACACCACCATA | + |
|
Preference number: 3 (lower is better) Translates to: QSPKTDNSGVLH*VQCSTATHTTI Trigger: TATGGTGGTGTGTGTGGCTGTGCTACACTGCACTCAATGAAGCACACCTGAGTTGTCTGTTTTAGGGGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR CAA 90 bp | GACAAGGTGGCACATACCTGTGAACCCAGCATTCCTAAAGTACAGGCAAAGAGAGGGATTTTGGCAGATTaGTTTCTGGGTTGGTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: DKVAHTCEPSIPKVQAKRGILAD*FLGWSS Trigger: AGATGACCAACCCAGAAACAAATCTGCCAAAATCCC...TCTCTTTGCCTGTACTTTAGGAATGCTGGGTTCACAGGTATGTGCCACCTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTGGCAATCTTTACGACAAACAGTAATTGTGCTGGAATTCTGCAGGAGGTGTGTCAGGACTCTCAGGTaGCAAAGTGAGAACTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SWQSLRQTVIVLEFCRRCVRTLR*QSENSG Trigger: TCCAGAGTTCTCACTTTGCAACCTGAGAGTCCTGAC...ACACCTCCTGCAGAATTCCAGCACAATTACTGTTTGTCGTAAAGATTGCCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR CAA 90 bp | AGCTGGCAATCTTTACGACAAACAGTAATTGTGCTGGAATTCTGCAGGAGGTGTGGGATGGGGCTGCTCTaGATGAAGGATGACATTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SWQSLRQTVIVLEFCRRCGMGLL*MKDDIS Trigger: ACTAATGTCATCCTTCATCAAGAGCAGCCCCATCCC...ACACCTCCTGCAGAATTCCAGCACAATTACTGTTTGTCGTAAAGATTGCCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
||
| 3UTR TCA 72 bp | CATCCAAGAGCACCAGGAAGCTTCAGGATTTGCCTCTaGAAGAACCAGGTGGGATTTTGGCAGATTTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: HPRAPGSFRICL*KNQVGFWQICF Trigger: GAAACAAATCTGCCAAAATCCCACCTGGTTCTTTCAGAGGCAAATCCTGAAGCTTCCTGGTGCTCTTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR CCA 72 bp | GCTGTTGTCACATCAACTCATCAACTCAACTCATACTaGGTAAACATACTTATCCACCTGCTCTTGCGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: AVVTSTHQLNSY*VNILIHLLLRE Trigger: CTCCCGCAAGAGCAGGTGGATAAGTATGTTTACCCAGTATGAGTTGAGTTGATGAGTTGATGTGACAACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| 3UTR-3UTR CAA 90 bp | TGGTACTCTAGGAGACGAGAAAAGGGCAACAGATTCTTTGGTACTAGAACCATAGAACCAGGTGGGATTTaGGCAGATTTGTTTCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: WYSRRREKGNRFFGTRTIEPGGI*ADLFLG Trigger: ACCCAGAAACAAATCTGCCAAAATCCCACCTGGTTC...TATGGTTCTAGTACCAAAGAATCTGTTGCCCTTTTCTCGTCTCCTAGAGTACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR-3UTR CAA 90 bp | TGGTACTCTAGGAGACGAGAAAAGGGCAACAGATTCTTTGGTACTAGAACCATAAGGAAGCTTCAGGATTaGCCTCTGAAAGAACCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: WYSRRREKGNRFFGTRTIRKLQD*PLKEPG Trigger: ACCTGGTTCTTTCAGAGGCAAATCCTGAAGCTTCCT...TATGGTTCTAGTACCAAAGAATCTGTTGCCCTTTTCTCGTCTCCTAGAGTACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR GCA 72 bp | TTTATCTACAATCCCCTAAAACAGACAACTCAGGTGTaGTTCATTGAGTGCAGTGTAGCACAGCCACACACA | + |
|
Preference number: 3 (lower is better) Translates to: FIYNPLKQTTQV*FIECSVAQPHT Trigger: TGTGTGTGGCTGTGCTACACTGCACTCAATGAAGCACACCTGAGTTGTCTGTTTTAGGGGATTGTAGATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAATAAACCCTTTCCTCCCCCAAGATGCTTTGGGTGAGTTTATACCACAAAAACCAAACCAAGCCTTCTaGAATCAGACCCTAACACCA | + |
|
Preference number: 3 (lower is better) Translates to: QINPFLPQDALGEFIPQKPNQAF*NQTLTP Trigger: TGGTGTTAGGGTCTGATTCAAGAAGGCTTGGTTTGG...TTTTTGTGGTATAAACTCACCCAAAGCATCTTGGGGGAGGAAAGGGTTTATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR GCA 72 bp | CAATCTTTACGACAAACAGTAATTGTGCTGGAATTCTaGAGGAGGTGTCAACCAGCTTCCTGTTCCTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: QSLRQTVIVLEF*RRCQPASCSFS Trigger: TGAAAAGGAACAGGAAGCTGGTTGACACCTCCTGCAGAATTCCAGCACAATTACTGTTTGTCGTAAAGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
||
| 3UTR CCA 72 bp | TTCCCTAAACATATGTATTTGTACTGCATGTGTGCCTaGTACTCTAGGAGACGAGAAAAGGGCAACAGATTC | + |
|
Preference number: 3 (lower is better) Translates to: FPKHMYLYCMCA*YSRRREKGNRF Trigger: GAATCTGTTGCCCTTTTCTCGTCTCCTAGAGTACCAGGCACACATGCAGTACAAATACATATGTTTAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR TCA 72 bp | CTAATATCTCATTCTGTAGTACACACCCTAGAGAAATaGAAACTTATGTTCACACATACACTAACCTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LISHSVVHTLEK*KLMFTHTLTCV Trigger: TACACAGGTTAGTGTATGTGTGAACATAAGTTTTCATTTCTCTAGGGTGTGTACTACAGAATGAGATATTAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
||
| CDS-3UTR TCA 90 bp | ATTGGCGCTGATGGCTACAGAGGGAGGGAGGCCATCCTCCTTTGGCGACTCGGCCACTGTTGGGCCGGATaGTGGGCCTGCATGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGADGYRGREAILLWRLGHCWAG*WACMTW Trigger: CCAAGTCATGCAGGCCCATCATCCGGCCCAACAGTG...GCCGAGTCGCCAAAGGAGGATGGCCTCCCTCCCTCTGTAGCCATCAGCGCCAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
||
| CDS-3UTR GCA 90 bp | GGTCATCTCCGGGAGGGCTGCAGGAACCCCAGCTTGCCATATGCACTGGGCACTTCGACCACAGGCACCTaGACATACTGGATATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GHLREGCRNPSLPYALGTSTTGT*TYWISS Trigger: CGAGGATATCCAGTATGTGCAGGTGCCTGTGGTCGA...AGTGCCCAGTGCATATGGCAAGCTGGGGTTCCTGCAGCCCTCCCGGAGATGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCTATGACCCAGCACCATCTGCCAGCTCCACCCTACCACTCACAGAAAAGTGAAGGCTGGGGGATCTaGACTGGGAAGGCACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VPMTQHHLPAPPYHSQKSEGWGI*TGKALH Trigger: GTGGAGTGCCTTCCCAGTTCAGATCCCCCAGCCTTC...ACTTTTCTGTGAGTGGTAGGGTGGAGCTGGCAGATGGTGCTGGGTCATAGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| CDS-3UTR GCA 90 bp | GATTTGTTTCTGGGTTGGTCATCTCCGGGAGGGCTGCAGGAACCCCAGCTTGCCAGGCTCTTGGTGATCTaGGAGAGGCCTCTGATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLFLGWSSPGGLQEPQLARLLVI*ERPLIE Trigger: TTCGATCAGAGGCCTCTCGCAGATCACCAAGAGCCT...GGCAAGCTGGGGTTCCTGCAGCCCTCCCGGAGATGACCAACCCAGAAACAAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
||
| 3UTR CAA 72 bp | AACATACTTATCCACCTGCTCTTGCGGGAGGAGCTATaGGCGCTGATGGCTACAGAGGGAGGGAGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: NILIHLLLREEL*ALMATEGGRPS Trigger: GGATGGCCTCCCTCCCTCTGTAGCCATCAGCGCCAATAGCTCCTCCCGCAAGAGCAGGTGGATAAGTATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| CDS-3UTR TCA 90 bp | AGAGACAACTCACTTGTTCCTCACAGTCCTCACAGCTCCTCAACAGTCAGCCAGCACTGTTGGGCCGGATaGTGGGCCTGCATGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDNSLVPHSPHSSSTVSQHCWAG*WACMTW Trigger: CCAAGTCATGCAGGCCCATCATCCGGCCCAACAGTG...CTGGCTGACTGTTGAGGAGCTGTGAGGACTGTGAGGAACAAGTGAGTTGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR CAA 72 bp | AGAACCAGGTGGGATTTTGGCAGATTTGTTTCTGGGTaGGTCATCTCCGGGAGGGCTGCAGGAACCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTRWDFGRFVSG*VISGRAAGTPA Trigger: AGCTGGGGTTCCTGCAGCCCTCCCGGAGATGACCAACCCAGAAACAAATCTGCCAAAATCCCACCTGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR CAA 72 bp | TTGCCTCTGAAAGAACCAGGTGGGATTTTGGCAGATTaGTTTCTGGGTTGGTCATCTCCGGGAGGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLKEPGGILAD*FLGWSSPGGLQ Trigger: CTGCAGCCCTCCCGGAGATGACCAACCCAGAAACAAATCTGCCAAAATCCCACCTGGTTCTTTCAGAGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR TCA 90 bp | ACATTGAGAGACATCCAAGAGCACCAGGAAGCTTCAGGATTTGCCTCTGAAAGAGAAGGCTGGGGGATCTaGACTGGGAAGGCACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLRDIQEHQEASGFASEREGWGI*TGKALH Trigger: GTGGAGTGCCTTCCCAGTTCAGATCCCCCAGCCTTC...TCTTTCAGAGGCAAATCCTGAAGCTTCCTGGTGCTCTTGGATGTCTCTCAATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR TCA 90 bp | CAAGAGCACCAGGAAGCTTCAGGATTTGCCTCTGAAAGAACCAGGTGGGATTTTTGGCATGGTACTTCATaGGGTAGGCGAGGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QEHQEASGFASERTRWDFWHGTS*GRRGTA Trigger: CGCTGTGCCTCGCCTACCTCATGAAGTACCATGCCA...AAAATCCCACCTGGTTCTTTCAGAGGCAAATCCTGAAGCTTCCTGGTGCTCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR GCA 90 bp | GAAAACCAGAATTGGGCCACTGTGGTAAAGGTAGAAGGGGCAGTCTCTGTAACCAGTGTGCGGCCCTTCTaGATCTCCACCGAATGGATA | + |
|
Preference number: 4 (lower is better) Translates to: ENQNWATVVKVEGAVSVTSVRPF*ISTEWI Trigger: TATCCATTCGGTGGAGATGCAGAAGGGCCGCACACT...GGTTACAGAGACTGCCCCTTCTACCTTTACCACAGTGGCCCAATTCTGGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTGGGACCCTGAGTCTCATGGTCTGCAATTCTGCACGCGGTCTTGTGTCATCTGCATTGTATTCTTaGCAAAGAGCTGCAACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QPGTLSLMVCNSARGLVSSALYS*QRAATR Trigger: ACGAGTTGCAGCTCTTTGGCAAGAATACAATGCAGA...TGACACAAGACCGCGTGCAGAATTGCAGACCATGAGACTCAGGGTCCCAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR CAA 72 bp | CGCTGGAGGGTGAGGCTGCTGGCTATCTTAAGGCTGTaGTCACATCAACTCATCAACTCAACTCATACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RWRVRLLAILRL*SHQLINSTHTG Trigger: CCCAGTATGAGTTGAGTTGATGAGTTGATGTGACAACAGCCTTAAGATAGCCAGCAGCCTCACCCTCCAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| CDS-3UTR GCA 90 bp | ACCACTGGGATCCAAGCACTGTGTGAATCTGATCTAGAAAACCAGAATTGGGCCAGGCTCTTGGTGATCTaGGAGAGGCCTCTGATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TTGIQALCESDLENQNWARLLVI*ERPLIE Trigger: TTCGATCAGAGGCCTCTCGCAGATCACCAAGAGCCT...GGCCCAATTCTGGTTTTCTAGATCAGATTCACACAGTGCTTGGATCCCAGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR GCA 90 bp | CAAGAGCACCAGGAAGCTTCAGGATTTGCCTCTGAAAGAACCAGGTGGGATTTTTCGACCACAGGCACCTaGACATACTGGATATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QEHQEASGFASERTRWDFSTTGT*TYWISS Trigger: CGAGGATATCCAGTATGTGCAGGTGCCTGTGGTCGA...AAAATCCCACCTGGTTCTTTCAGAGGCAAATCCTGAAGCTTCCTGGTGCTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR GCA 90 bp | GACAAGGTGGCACATACCTGTGAACCCAGCATTCCTAAAGTACAGGCAAAGAGACACAATGCAACAGTGTaGGGCCCTTCTGCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DKVAHTCEPSIPKVQAKRHNATV*GPSASP Trigger: TGGAGATGCAGAAGGGCCGCACACTGTTGCATTGTG...TCTCTTTGCCTGTACTTTAGGAATGCTGGGTTCACAGGTATGTGCCACCTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR CAA 72 bp | CAGGGCTTAAACCAAACCAACCCAAACCAAGCCTTCTaGAATCAGACCCTAACACCAAGGGCTTCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGLNQTNPNQAF*NQTLTPRASEQ Trigger: CTGCTCAGAAGCCCTTGGTGTTAGGGTCTGATTCAAGAAGGCTTGGTTTGGGTTGGTTTGGTTTAAGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR TCA 90 bp | AGTCAAATAAACCCTTTCCTCCCCCAAGATGCTTTGGGTGAGTTTATACCACAATGGCATGGTACTTCATaGGGTAGGCGAGGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQINPFLPQDALGEFIPQWHGTS*GRRGTA Trigger: CGCTGTGCCTCGCCTACCTCATGAAGTACCATGCCA...TTGTGGTATAAACTCACCCAAAGCATCTTGGGGGAGGAAAGGGTTTATTTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR TCA 90 bp | AGTCAAATAAACCCTTTCCTCCCCCAAGATGCTTTGGGTGAGTTTATACCACAAGATGATGGGCCTGCATaGCTTGGTCCAAGTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQINPFLPQDALGEFIPQDDGPA*LGPSVG Trigger: GCCCACACTTGGACCAAGTCATGCAGGCCCATCATC...TTGTGGTATAAACTCACCCAAAGCATCTTGGGGGAGGAAAGGGTTTATTTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR CCA 90 bp | CCTGCCTACCTCATACCAGGCTCTCCATTAGACTGTTACAGTGTTTGTCAGTGTGACTTGGTCCAAGTGTaGGCATCTACAAGGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: PAYLIPGSPLDCYSVCQCDLVQV*ASTRDM Trigger: CATGTCCCTTGTAGATGCCCACACTTGGACCAAGTC...ACACTGACAAACACTGTAACAGTCTAATGGAGAGCCTGGTATGAGGTAGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR CAA 72 bp | CTTCAGGATTTGCCTCTGAAAGAACCAGGTGGGATTTaGGCAGATTTGTTTCTGGGTTGGTCATCTCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQDLPLKEPGGI*ADLFLGWSSPG Trigger: TCCCGGAGATGACCAACCCAGAAACAAATCTGCCAAAATCCCACCTGGTTCTTTCAGAGGCAAATCCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR GCA 90 bp | AGTCAAATAAACCCTTTCCTCCCCCAAGATGCTTTGGGTGAGTTTATACCACAACACAATGCAACAGTGTaGGGCCCTTCTGCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQINPFLPQDALGEFIPQHNATV*GPSASP Trigger: TGGAGATGCAGAAGGGCCGCACACTGTTGCATTGTG...TTGTGGTATAAACTCACCCAAAGCATCTTGGGGGAGGAAAGGGTTTATTTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR GCA 90 bp | GACAAGGTGGCACATACCTGTGAACCCAGCATTCCTAAAGTACAGGCAAAGAGAGGCGAGTCCATCATCTaGATTGTATTCTTGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DKVAHTCEPSIPKVQAKRGESII*IVFLPK Trigger: CTTTGGCAAGAATACAATGCAGATGATGGACTCGCC...TCTCTTTGCCTGTACTTTAGGAATGCTGGGTTCACAGGTATGTGCCACCTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR GCA 90 bp | ACCACTGGGATCCAAGCACTGTGTGAATCTGATCTAGAAAACCAGAATTGGGCCGGCGAGTCCATCATCTaGATTGTATTCTTGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TTGIQALCESDLENQNWAGESII*IVFLPK Trigger: CTTTGGCAAGAATACAATGCAGATGATGGACTCGCC...GGCCCAATTCTGGTTTTCTAGATCAGATTCACACAGTGCTTGGATCCCAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR CAA 72 bp | CATGAGCAACAGGCAGCACCAACTGGATCCAGGGTATaGATGTTAAGAACAAAACAAGGTGGACTTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HEQQAAPTGSRV*MLRTKQGGLVG Trigger: CCCAACAAGTCCACCTTGTTTTGTTCTTAACATCAATACCCTGGATCCAGTTGGTGCTGCCTGTTGCTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| CDS-3UTR GCA 90 bp | CCTGCCTACCTCATACCAGGCTCTCCATTAGACTGTTACAGTGTTTGTCAGTGTTCTGCATTGTATTCTTaGCAAAGAGCTGCAACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PAYLIPGSPLDCYSVCQCSALYS*QRAATR Trigger: ACGAGTTGCAGCTCTTTGGCAAGAATACAATGCAGA...ACACTGACAAACACTGTAACAGTCTAATGGAGAGCCTGGTATGAGGTAGGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR CCA 90 bp | ACAGTAAGTTCTCATAGTCACCGAGCCTCCACCTCCAAATGTTTTCTTTTAATGGACTTGGTCCAAGTGTaGGCATCTACAAGGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: TVSSHSHRASTSKCFLLMDLVQV*ASTRDM Trigger: CATGTCCCTTGTAGATGCCCACACTTGGACCAAGTC...CATTAAAAGAAAACATTTGGAGGTGGAGGCTCGGTGACTATGAGAACTTACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| 3UTR CAA 72 bp | TTTCTGTGTATGAGTGTTTTCCCTAAACATATGTATTaGTACTGCATGTGTGCCTGGTACTCTAGGAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: FLCMSVFPKHMY*YCMCAWYSRRR Trigger: TCGTCTCCTAGAGTACCAGGCACACATGCAGTACAAATACATATGTTTAGGGAAAACACTCATACACAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR CAA 90 bp | GGTCATCTCCGGGAGGGCTGCAGGAACCCCAGCTTGCCATATGCACTGGGCACTTTGGCAGCCACACCATaGCTGATAAACAGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GHLREGCRNPSLPYALGTLAATP*LINRLL Trigger: CAAGAGCCTGTTTATCAGCAATGGTGTGGCTGCCAA...AGTGCCCAGTGCATATGGCAAGCTGGGGTTCCTGCAGCCCTCCCGGAGATGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS GCA 90 bp | CGAATGGATACGGTCGGCAACGGAATCGAAGAAATTGGAGAGGCGTaGGACGGGCGCATCGACCACAGGCACCTGCACATACTGGATATC | + |
|
Preference number: 5 (lower is better) Translates to: RMDTVGNGIEEIGEA*DGRIDHRHLHILDI Trigger: GATATCCAGTATGTGCAGGTGCCTGTGGTCGATGCGCCCGTCGCACGCCTCTCCAATTTCTTCGATTCCGTTGCCGACCGTATCCATTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR CAA 90 bp | CAGCCTGGGACCCTGAGTCTCATGGTCTGCAATTCTGCACGCGGTCTTGTGTCACTGATAAACAGGCTCTaGGTGATCTGCGAGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPGTLSLMVCNSARGLVSLINRL*VICERP Trigger: AGGCCTCTCGCAGATCACCAAGAGCCTGTTTATCAG...TGACACAAGACCGCGTGCAGAATTGCAGACCATGAGACTCAGGGTCCCAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS CCA 90 bp | CATCAAACGGGTCTCCTTCTCGTAGATGTCTGGGATCCGTCCCATTaGCGAGTCCATCATCTGCATTGTATTCTTGCCAAAGAGCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HQTGLLLVDVWDPSH*RVHHLHCILAKELQ Trigger: TTGCAGCTCTTTGGCAAGAATACAATGCAGATGATGGACTCGCCAATGGGACGGATCCCAGACATCTACGAGAAGGAGACCCGTTTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR CAA 90 bp | AGCTGGCAATCTTTACGACAAACAGTAATTGTGCTGGAATTCTGCAGGAGGTGTCTGATAAACAGGCTCTaGGTGATCTGCGAGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SWQSLRQTVIVLEFCRRCLINRL*VICERP Trigger: AGGCCTCTCGCAGATCACCAAGAGCCTGTTTATCAG...ACACCTCCTGCAGAATTCCAGCACAATTACTGTTTGTCGTAAAGATTGCCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055931.5 |
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| CDS-3UTR CAA 90 bp | TGGTACTCTAGGAGACGAGAAAAGGGCAACAGATTCTTTGGTACTAGAACCATATTGGCAGCCACACCATaGCTGATAAACAGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WYSRRREKGNRFFGTRTILAATP*LINRLL Trigger: CAAGAGCCTGTTTATCAGCAATGGTGTGGCTGCCAA...TATGGTTCTAGTACCAAAGAATCTGTTGCCCTTTTCTCGTCTCCTAGAGTACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS-3UTR CAA 90 bp | AGTCAAATAAACCCTTTCCTCCCCCAAGATGCTTTGGGTGAGTTTATACCACAAAGTCCATCATCTGCATaGTATTCTTGCCAAAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQINPFLPQDALGEFIPQSPSSA*YSCQRA Trigger: AGCTCTTTGGCAAGAATACAATGCAGATGATGGACT...TTGTGGTATAAACTCACCCAAAGCATCTTGGGGGAGGAAAGGGTTTATTTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS GCA 72 bp | ACCCCAGCAGCACAATGCAACAGTGTGCGGCCCTTCTaGATCTCCACCGAATGGATACGGTCGGCAACGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TPAAQCNSVRPF*ISTEWIRSATE Trigger: TTCCGTTGCCGACCGTATCCATTCGGTGGAGATGCAGAAGGGCCGCACACTGTTGCATTGTGCTGCTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS CCA 72 bp | TGGGATCATCAAACGGGTCTCCTTCTCGTAGATGTCTaGGATCCGTCCCATTGGCGAGTCCATCATCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: WDHQTGLLLVDV*DPSHWRVHHLH Trigger: ATGCAGATGATGGACTCGCCAATGGGACGGATCCCAGACATCTACGAGAAGGAGACCCGTTTGATGATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS CAA 72 bp | GGGTCTCCTTCTCGTAGATGTCTGGGATCCGTCCCATaGGCGAGTCCATCATCTGCATTGTATTCTTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GSPSRRCLGSVP*ASPSSALYSCQ Trigger: TTGGCAAGAATACAATGCAGATGATGGACTCGCCAATGGGACGGATCCCAGACATCTACGAGAAGGAGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS CAA 90 bp | TCATCAAACGGGTCTCCTTCTCGTAGATGTCTGGGATCCGTCCCATaGGCGAGTCCATCATCTGCATTGTATTCTTGCCAAAGAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSNGSPSRRCLGSVP*ASPSSALYSCQRAA Trigger: TGCAGCTCTTTGGCAAGAATACAATGCAGATGATGGACTCGCCAATGGGACGGATCCCAGACATCTACGAGAAGGAGACCCGTTTGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS CCA 72 bp | GGTCTCCTTCTCGTAGATGTCTGGGATCCGTCCCATTaGCGAGTCCATCATCTGCATTGTATTCTTGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GLLLVDVWDPSH*RVHHLHCILAK Trigger: TTTGGCAAGAATACAATGCAGATGATGGACTCGCCAATGGGACGGATCCCAGACATCTACGAGAAGGAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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| CDS TCA 72 bp | CTGGATATCCTCGTAGAAGGTGTTTGCTACCTCTACTaGGACGTTGATGACTGTGGTGATCTGATTGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LDILVEGVCYLY*DVDDCGDLIAG Trigger: TCCAGCAATCAGATCACCACAGTCATCAACGTCTCAGTAGAGGTAGCAAACACCTTCTACGAGGATATCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055931.5 ENSMUST00000109996.8 |
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