Pregenerated sensors for DUSP15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042662Ensembl transcript IDs: ENSMUST00000037715.7, ENSMUST00000109811.4, ENSMUST00000123121.9
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGACTCACAGAGCGGACACCGAGGACAGACGCAGACAAGCGTGGTaGCTACGGGGCAGGGGCGAGGCTCCCATGGGCTCTGGGTGCGTC | + |
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Preference number: 1 (lower is better) Translates to: QTHRADTEDRRRQAW*LRGRGEAPMGSGCV Trigger: GACGCACCCAGAGCCCATGGGAGCCTCGCCCCTGCCCCGTAGCCACCACGCTTGTCTGCGTCTGTCCTCGGTGTCCGCTCTGTGAGTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR CCA 90 bp | AATCCGCCCCACCCGACCCTCCCTCCTGCTCCTCGCCTGTGGGGGTaGAGGACCAGGACCCTTCTCCCGAGTCCACGGACTAAGGCACCA | + |
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Preference number: 1 (lower is better) Translates to: NPPHPTLPPAPRLWG*RTRTLLPSPRTKAP Trigger: TGGTGCCTTAGTCCGTGGACTCGGGAGAAGGGTCCTGGTCCTCCACCCCCACAGGCGAGGAGCAGGAGGGAGGGTCGGGTGGGGCGGATT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR GCA 90 bp | CCAGGACCCTTCTCCCGAGTCCACGGACTAAGGCACCAGGTGGCTTaGAGCAGGCCGGCCGAACACAGACTCACAGAGCGGACACCGAGG | + |
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Preference number: 1 (lower is better) Translates to: PGPFSRVHGLRHQVA*SRPAEHRLTERTPR Trigger: CCTCGGTGTCCGCTCTGTGAGTCTGTGTTCGGCCGGCCTGCTGCAAGCCACCTGGTGCCTTAGTCCGTGGACTCGGGAGAAGGGTCCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR TCA 90 bp | CATTGGCTCAGCCCAGTGCTGAGATCTCTGCCTCCCCATCGGCCATaGAGCCCCAAGAGTCTACTTGGGCTCTTTCAGGTCGGCAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: HWLSPVLRSLPPHRP*SPKSLLGLFQVGSS Trigger: AGAGCTGCCGACCTGAAAGAGCCCAAGTAGACTCTTGGGGCTTCATGGCCGATGGGGAGGCAGAGATCTCAGCACTGGGCTGAGCCAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR CCA 90 bp | CATGGACAGAGGTGGGGAGTCCGGTCTCCCCTTCACAAGCACCGGTaGGAGGGCATTCTTATTCCTCTTCCTCTTGGTCCCATACGCCAG | + |
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Preference number: 1 (lower is better) Translates to: HGQRWGVRSPLHKHR*EGILIPLPLGPIRQ Trigger: CTGGCGTATGGGACCAAGAGGAAGAGGAATAAGAATGCCCTCCCACCGGTGCTTGTGAAGGGGAGACCGGACTCCCCACCTCTGTCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR TCA 90 bp | AGAGTGGAGTCTGCAGCCAGGCTGCCTGAGCTCACATCCGAGTCCTaGCTCTTGCTTGTAACCTGGGGCACCAGCCTCAGTTTTCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: RVESAARLPELTSES*LLLVTWGTSLSFLL Trigger: GAGAAGAAAACTGAGGCTGGTGCCCCAGGTTACAAGCAAGAGTCAGGACTCGGATGTGAGCTCAGGCAGCCTGGCTGCAGACTCCACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR TCA 90 bp | ATTAGAGGTTGGTGTGGTCATTTCACCATTGGCTCAGCCCAGTGCTaGGATCTCTGCCTCCCCATCGGCCATGAAGCCCCAAGAGTCTAC | + |
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Preference number: 1 (lower is better) Translates to: IRGWCGHFTIGSAQC*DLCLPIGHEAPRVY Trigger: GTAGACTCTTGGGGCTTCATGGCCGATGGGGAGGCAGAGATCTCAGCACTGGGCTGAGCCAATGGTGAAATGACCACACCAACCTCTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR GCA 90 bp | GCATCCTGTGAGGTCTTTCTCTCCAGGAACCTTCACACTAGGAGGTaGTTCCTCCCTACTGCCACCACTGGAAACAACTTGCCCTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: ASCEVFLSRNLHTRR*FLPTATTGNNLPLL Trigger: CAGCAAGGGCAAGTTGTTTCCAGTGGTGGCAGTAGGGAGGAAGCACCTCCTAGTGTGAAGGTTCCTGGAGAGAAAGACCTCACAGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR CCA 90 bp | GGAGCCTTTCATATTTCTCGATCACAAAGGGTAAGTAATGAAGAGTaGAGTCTGCAGCCAGGCTGCCTGAGCTCACATCCGAGTCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: GAFHISRSQRVSNEE*SLQPGCLSSHPSPD Trigger: GTCAGGACTCGGATGTGAGCTCAGGCAGCCTGGCTGCAGACTCCACTCTTCATTACTTACCCTTTGTGATCGAGAAATATGAAAGGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR TCA 90 bp | ACAGTAAAAGATGACGTGAAGGTAACACCACCAATTGGACCACATTaGCCAGTTATCTGTGCAGAGAGGGAAGGAGAACTGAAGAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: TVKDDVKVTPPIGPH*PVICAEREGELKKR Trigger: CCTCTTCTTCAGTTCTCCTTCCCTCTCTGCACAGATAACTGGTCAATGTGGTCCAATTGGTGGTGTTACCTTCACGTCATCTTTTACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR TCA 90 bp | CTGGGTGTTCTCCCTGAGGATAAAGCCATCTCAGACAGTAAAAGATaGCGTGAAGGTAACACCACCAATTGGACCACATTGACCAGTTAT | + |
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Preference number: 1 (lower is better) Translates to: LGVLPEDKAISDSKR*REGNTTNWTTLTSY Trigger: ATAACTGGTCAATGTGGTCCAATTGGTGGTGTTACCTTCACGTCATCTTTTACTGTCTGAGATGGCTTTATCCTCAGGGAGAACACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR GCA 90 bp | ATGGCAAATCCTTTAAGCCAAGGGGTGGACAATGTACACAGAACCTaGAAGAACACTACATACTTTGAACCATCTCTAAAAATCCACCAA | + |
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Preference number: 1 (lower is better) Translates to: MANPLSQGVDNVHRT*KNTTYFEPSLKIHQ Trigger: TTGGTGGATTTTTAGAGATGGTTCAAAGTATGTAGTGTTCTTGCAGGTTCTGTGTACATTGTCCACCCCTTGGCTTAAAGGATTTGCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR GCA 90 bp | GGATGCAGGGGGACTTCCTGCCCTCAGTGGGAGTCCCTCCCAGCCAGATGGCAACCCGACCCTCCCTCCTaGTCCTCGCCTGTGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GCRGTSCPQWESLPARWQPDPPS*SSPVGV Trigger: CACCCCCACAGGCGAGGAGCAGGAGGGAGGGTCGGG...TTGCCATCTGGCTGGGAGGGACTCCCACTGAGGGCAGGAAGTCCCCCTGCATCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR CCA 90 bp | CATCGCACAGGCAGAGCTTTGCTCACTGTGGTAGCCCCAGAGCCCAGCACAGTAGGCTCCCATGGGCTCTaGGTGCGTCCCAGCCGCGGG | + |
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Preference number: 2 (lower is better) Translates to: HRTGRALLTVVAPEPSTVGSHGL*VRPSRG Trigger: CCCGCGGCTGGGACGCACCCAGAGCCCATGGGAGCC...TACTGTGCTGGGCTCTGGGGCTACCACAGTGAGCAAAGCTCTGCCTGTGCGATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR TCA 90 bp | ACCAATCCGAGGCGTGCTGTCCCTCCAAGCACCCGGCTCCCATGTCTTAGAGGACCAAGCTCTGCGGAATaGCCAGAGGCACCCGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: TNPRRAVPPSTRLPCLRGPSSAE*PEAPGQ Trigger: CTGGCCGGGTGCCTCTGGTCATTCCGCAGAGCTTGG...TCCTCTAAGACATGGGAGCCGGGTGCTTGGAGGGACAGCACGCCTCGGATTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAAAGGGGCACAAGGGTGGTGTCAGGAGTCCAGGCCTCTGGAGAGATGGAGGGGCGAGGCTCCCATaGGCTCTGGGTGCGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: REKGHKGGVRSPGLWRDGGARLP*ALGASQ Trigger: CTGGGACGCACCCAGAGCCCATGGGAGCCTCGCCCC...TCCATCTCTCCAGAGGCCTGGACTCCTGACACCACCCTTGTGCCCCTTTTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR CCA 90 bp | CGAGGCGTGCTGTCCCTCCAAGCACCCGGCTCCCATGTCTTAGAGGAGCCTTTCTGGAGGTGGGTGGGCTaGTGTCAAAGAAGGGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: RGVLSLQAPGSHVLEEPFWRWVG*CQRRAW Trigger: CCACGCCCTTCTTTGACACCAGCCCACCCACCTCCA...GAAAGGCTCCTCTAAGACATGGGAGCCGGGTGCTTGGAGGGACAGCACGCCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR TCA 90 bp | CGAGGCGTGCTGTCCCTCCAAGCACCCGGCTCCCATGTCTTAGAGGAGCCTTTCTTGGGGAGGGTGGAATaGGGATCAGCTGAGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: RGVLSLQAPGSHVLEEPFLGRVE*GSAELQ Trigger: CTGCAGCTCAGCTGATCCTCATTCCACCCTCCCCAA...GAAAGGCTCCTCTAAGACATGGGAGCCGGGTGCTTGGAGGGACAGCACGCCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR GCA 90 bp | TTCAGGGAGGGCAGCGTCTGGAGGGATCTGGATCTGGAAACCAAAGGGTTTCCTAGGCACCAGGTGGCTTaGAGCAGGCCGGCCGAACAC | + |
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Preference number: 2 (lower is better) Translates to: FREGSVWRDLDLETKGFPRHQVA*SRPAEH Trigger: GTGTTCGGCCGGCCTGCTGCAAGCCACCTGGTGCCT...AGGAAACCCTTTGGTTTCCAGATCCAGATCCCTCCAGACGCTGCCCTCCCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR GCA 90 bp | CGAGGCGTGCTGTCCCTCCAAGCACCCGGCTCCCATGTCTTAGAGGAGCCTTTCCTTCACACTAGGAGGTaGTTCCTCCCTACTGCCACC | + |
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Preference number: 2 (lower is better) Translates to: RGVLSLQAPGSHVLEEPFLHTRR*FLPTAT Trigger: GGTGGCAGTAGGGAGGAAGCACCTCCTAGTGTGAAG...GAAAGGCTCCTCTAAGACATGGGAGCCGGGTGCTTGGAGGGACAGCACGCCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR GCA 90 bp | GGATGCAGGGGGACTTCCTGCCCTCAGTGGGAGTCCCTCCCAGCCAGATGGCAACCACTGGAAACAACTTaGCCTTGCTGTGTGTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GCRGTSCPQWESLPARWQPLETT*PCCVCL Trigger: CAAGCACACACAGCAAGGGCAAGTTGTTTCCAGTGG...TTGCCATCTGGCTGGGAGGGACTCCCACTGAGGGCAGGAAGTCCCCCTGCATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR CCA 90 bp | AGGATGCAGGGGGACTTCCTGCCCTCAGTGGGAGTCCCTCCCAGCCAGATGGCATGGTCATTTCACCATTaGCTCAGCCCAGTGCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: RMQGDFLPSVGVPPSQMAWSFHH*LSPVLR Trigger: TCTCAGCACTGGGCTGAGCCAATGGTGAAATGACCA...TGCCATCTGGCTGGGAGGGACTCCCACTGAGGGCAGGAAGTCCCCCTGCATCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR TCA 90 bp | CGAGGCGTGCTGTCCCTCCAAGCACCCGGCTCCCATGTCTTAGAGGAGCCTTTCGGAATGAGGATCAGCTaGGCTGCAGTGTTTAGCACA | + |
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Preference number: 2 (lower is better) Translates to: RGVLSLQAPGSHVLEEPFGMRIS*AAVFST Trigger: TGTGCTAAACACTGCAGCTCAGCTGATCCTCATTCC...GAAAGGCTCCTCTAAGACATGGGAGCCGGGTGCTTGGAGGGACAGCACGCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGGAGGGCAGCGTCTGGAGGGATCTGGATCTGGAAACCAAAGGGTTTCCTAGGAGTCCAGGCCTCTaGAGAGATGGAGGTGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: FREGSVWRDLDLETKGFPRSPGL*RDGGGW Trigger: CCACCCACCTCCATCTCTCCAGAGGCCTGGACTCCT...AGGAAACCCTTTGGTTTCCAGATCCAGATCCCTCCAGACGCTGCCCTCCCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR TCA 90 bp | CGAGGCGTGCTGTCCCTCCAAGCACCCGGCTCCCATGTCTTAGAGGAGCCTTTCCCAATTGGACCACATTaGCCAGTTATCTGTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: RGVLSLQAPGSHVLEEPFPIGPH*PVICAE Trigger: CTCTGCACAGATAACTGGTCAATGTGGTCCAATTGG...GAAAGGCTCCTCTAAGACATGGGAGCCGGGTGCTTGGAGGGACAGCACGCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCAAGCACCCGGCTCCCATGTCTTAGAGGAGCCTTTCATATTTCTCGATCACTGCAGGGGGACTTCCTaGCCTCAGTGGGAGTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: LQAPGSHVLEEPFIFLDHCRGTS*PQWESL Trigger: GAGGGACTCCCACTGAGGGCAGGAAGTCCCCCTGCA...GTGATCGAGAAATATGAAAGGCTCCTCTAAGACATGGGAGCCGGGTGCTTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR CCA 90 bp | CATCGCACAGGCAGAGCTTTGCTCACTGTGGTAGCCCCAGAGCCCAGCACAGTAAGAAGGGCGTGGTCTTaGAGTTCAGCTCTGAAGACT | + |
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Preference number: 2 (lower is better) Translates to: HRTGRALLTVVAPEPSTVRRAWS*SSALKT Trigger: AGTCTTCAGAGCTGAACTCCAAGACCACGCCCTTCT...TACTGTGCTGGGCTCTGGGGCTACCACAGTGAGCAAAGCTCTGCCTGTGCGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTCACAAGCACCGGTGGGAGGGCATTCTTATTCCTCTTCCTCTTGGTCCCATGTTCCAGGGCCCCACTaGATGTTGAGATGCATGGCA | + |
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Preference number: 2 (lower is better) Translates to: PSQAPVGGHSYSSSSWSHVPGPH*MLRCMA Trigger: TGCCATGCATCTCAACATTCAGTGGGGCCCTGGAAC...ATGGGACCAAGAGGAAGAGGAATAAGAATGCCCTCCCACCGGTGCTTGTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTCAGTAGAGAGCCCTCACTGCGCCATAAGGCTAAGGCGTAGAGGTGATATTCTTGCTGTGTGTGCTTaGGCCAGCTGCCTGACCTCT | + |
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Preference number: 2 (lower is better) Translates to: SSVESPHCAIRLRRRGDILAVCA*ASCLTS Trigger: AGAGGTCAGGCAGCTGGCCCAAGCACACACAGCAAG...AATATCACCTCTACGCCTTAGCCTTATGGCGCAGTGAGGGCTCTCTACTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCAAGCACCCGGCTCCCATGTCTTAGAGGAGCCTTTCATATTTCTCGATCACCTGGAGAGATGGAGGTaGGTGGGCTGGTGTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: LQAPGSHVLEEPFIFLDHLERWR*VGWCQR Trigger: TCTTTGACACCAGCCCACCCACCTCCATCTCTCCAG...GTGATCGAGAAATATGAAAGGCTCCTCTAAGACATGGGAGCCGGGTGCTTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR CCA 90 bp | AGCACCCGGCTCCCATGTCTTAGAGGAGCCTTTCATATTTCTCGATCACAAAGGAGAGATGGAGGTGGGTaGGCTGGTGTCAAAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: STRLPCLRGAFHISRSQRRDGGG*AGVKEG Trigger: CCCTTCTTTGACACCAGCCCACCCACCTCCATCTCT...CCTTTGTGATCGAGAAATATGAAAGGCTCCTCTAAGACATGGGAGCCGGGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGGAGGGCAGCGTCTGGAGGGATCTGGATCTGGAAACCAAAGGGTTTCCTGGTAACACCACCAATTaGACCACATTGACCAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: FREGSVWRDLDLETKGFPGNTTN*TTLTSY Trigger: ATAACTGGTCAATGTGGTCCAATTGGTGGTGTTACC...AGGAAACCCTTTGGTTTCCAGATCCAGATCCCTCCAGACGCTGCCCTCCCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR-3UTR CCA 90 bp | AAGATAGACTGTGGGTTTGAGGAAGGGGAGGTTAGGATGGCTAAATATGGGGAGCTTGGTGAGATGTCATaGGATGGATGGCATCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KIDCGFEEGEVRMAKYGELGEMS*DGWHLW Trigger: CCAGAGATGCCATCCATCCCATGACATCTCACCAAG...CTCCCCATATTTAGCCATCCTAACCTCCCCTTCCTCAAACCCACAGTCTATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
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| 3UTR GCA 72 bp | CCTCCAGGCCAATCCGCCCCACCCGACCCTCCCTCCTaGTCCTCGCCTGTGGGGGTGGAGGACCAGGACCCT | + |
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Preference number: 3 (lower is better) Translates to: PPGQSAPPDPPS*SSPVGVEDQDP Trigger: AGGGTCCTGGTCCTCCACCCCCACAGGCGAGGAGCAGGAGGGAGGGTCGGGTGGGGCGGATTGGCCTGGAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR CCA 72 bp | CACCCGACCCTCCCTCCTGCTCCTCGCCTGTGGGGGTaGAGGACCAGGACCCTTCTCCCGAGTCCACGGACT | + |
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Preference number: 3 (lower is better) Translates to: HPTLPPAPRLWG*RTRTLLPSPRT Trigger: AGTCCGTGGACTCGGGAGAAGGGTCCTGGTCCTCCACCCCCACAGGCGAGGAGCAGGAGGGAGGGTCGGGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR CCA 72 bp | AGAGCGGACACCGAGGACAGACGCAGACAAGCGTGGTaGCTACGGGGCAGGGGCGAGGCTCCCATGGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: RADTEDRRRQAW*LRGRGEAPMGS Trigger: AGAGCCCATGGGAGCCTCGCCCCTGCCCCGTAGCCACCACGCTTGTCTGCGTCTGTCCTCGGTGTCCGCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR GCA 72 bp | TGCTCTGCTTCCCGCAGGCCCCTGGAGCCCAAGCTCTaGGGAATGACCAGAGGCACCCGGCCAGGCAACTTC | + |
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Preference number: 3 (lower is better) Translates to: CSASRRPLEPKL*GMTRGTRPGNF Trigger: GAAGTTGCCTGGCCGGGTGCCTCTGGTCATTCCGCAGAGCTTGGGCTCCAGGGGCCTGCGGGAAGCAGAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR TCA 72 bp | CTTCCCGCAGGCCCCTGGAGCCCAAGCTCTGCGGAATaGCCAGAGGCACCCGGCCAGGCAACTTCTGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: LPAGPWSPSSAE*PEAPGQATSVS Trigger: AGACACAGAAGTTGCCTGGCCGGGTGCCTCTGGTCATTCCGCAGAGCTTGGGCTCCAGGGGCCTGCGGGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR CCA 72 bp | CAATCAGGAGGATGCAGGGGGACTTCCTGCCCTCAGTaGGAGTCCCTCCCAGCCAGATGGCAAGATGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: QSGGCRGTSCPQ*ESLPARWQDGP Trigger: GGGACCATCTTGCCATCTGGCTGGGAGGGACTCCCACTGAGGGCAGGAAGTCCCCCTGCATCCTCCTGATTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR TCA 72 bp | GGTGTCAAAGAAGGGCGTGGTCTTGGAGTTCAGCTCTaGAGACTGGTGGAGAATGGCGCTTCCCGGGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: GVKEGRGLGVQL*RLVENGASRGP Trigger: GGGCCCCCGGGAAGCGCCATTCTCCACCAGTCTTCAGAGCTGAACTCCAAGACCACGCCCTTCTTTGACACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR TCA 72 bp | TCTGCAGCCAGGCTGCCTGAGCTCACATCCGAGTCCTaGCTCTTGCTTGTAACCTGGGGCACCAGCCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: SAARLPELTSES*LLLVTWGTSLS Trigger: ACTGAGGCTGGTGCCCCAGGTTACAAGCAAGAGTCAGGACTCGGATGTGAGCTCAGGCAGCCTGGCTGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR GCA 72 bp | GGTGCTTCCTCCCTACTGCCACCACTGGAAACAACTTaGCCTTGCTGTGTGTGCTTGGGCCAGCTGCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: GASSLLPPLETT*PCCVCLGQLPD Trigger: GTCAGGCAGCTGGCCCAAGCACACACAGCAAGGGCAAGTTGTTTCCAGTGGTGGCAGTAGGGAGGAAGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR CCA 72 bp | AAGGGGCACAAGGGTGGTGTCAGGAGTCCAGGCCTCTaGAGAGATGGAGGTGGGTGGGCTGGTGTCAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: KGHKGGVRSPGL*RDGGGWAGVKE Trigger: TTCTTTGACACCAGCCCACCCACCTCCATCTCTCCAGAGGCCTGGACTCCTGACACCACCCTTGTGCCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR CCA 72 bp | AGGTGGGGAGTCCGGTCTCCCCTTCACAAGCACCGGTaGGAGGGCATTCTTATTCCTCTTCCTCTTGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: RWGVRSPLHKHR*EGILIPLPLGP Trigger: GGGACCAAGAGGAAGAGGAATAAGAATGCCCTCCCACCGGTGCTTGTGAAGGGGAGACCGGACTCCCCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR TCA 72 bp | TGGTGTGGTCATTTCACCATTGGCTCAGCCCAGTGCTaGGATCTCTGCCTCCCCATCGGCCATGAAGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: WCGHFTIGSAQC*DLCLPIGHEAP Trigger: TGGGGCTTCATGGCCGATGGGGAGGCAGAGATCTCAGCACTGGGCTGAGCCAATGGTGAAATGACCACACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR GCA 72 bp | TCCTCCCTACTGCCACCACTGGAAACAACTTGCCCTTaGTGTGTGTGCTTGGGCCAGCTGCCTGACCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: SSLLPPLETTCP*CVCLGQLPDLS Trigger: AGAGAGGTCAGGCAGCTGGCCCAAGCACACACAGCAAGGGCAAGTTGTTTCCAGTGGTGGCAGTAGGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR GCA 72 bp | AAAACCAACCAATCAGGAGGATGCAGGGGGACTTCCTaGCCTCAGTGGGAGTCCCTCCCAGCCAGATGGCAA | + |
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Preference number: 3 (lower is better) Translates to: KTNQSGGCRGTS*PQWESLPARWQ Trigger: TTGCCATCTGGCTGGGAGGGACTCCCACTGAGGGCAGGAAGTCCCCCTGCATCCTCCTGATTGGTTGGTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| 3UTR CCA 72 bp | CCCTTGGGCCTAGCCAGAACGCTTGGTGAGATGTCATaGGATGGATGGCATCTCTGGGTCAGGAGCACTGGA | + |
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Preference number: 3 (lower is better) Translates to: PLGLARTLGEMS*DGWHLWVRSTG Trigger: TCCAGTGCTCCTGACCCAGAGATGCCATCCATCCCATGACATCTCACCAAGCGTTCTGGCTAGGCCCAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
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| 3UTR CCA 72 bp | AGGTGGGTGGGCTGGTGTCAAAGAAGGGCGTGGTCTTaGAGTTCAGCTCTGAAGACTGGTGGAGAATGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: RWVGWCQRRAWS*SSALKTGGEWR Trigger: GCGCCATTCTCCACCAGTCTTCAGAGCTGAACTCCAAGACCACGCCCTTCTTTGACACCAGCCCACCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCAGTAGAGAGCCCTCACTGCGCCATAAGGCTAAGGCGTAGAGGTGATATTCCTTGCTGTGTGTGCTaGGGCCAGCTGCCTGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSVESPHCAIRLRRRGDIPCCVC*GQLPDL Trigger: GAGGTCAGGCAGCTGGCCCAAGCACACACAGCAAGG...AATATCACCTCTACGCCTTAGCCTTATGGCGCAGTGAGGGCTCTCTACTGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR TCA 72 bp | AGAGAGCTACCCCTTGGGCCTAGCCAGAACGCTTGGTaGGATGTCATGGGATGGATGGCATCTCTGGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RELPLGPSQNAW*DVMGWMASLGQ Trigger: CTGACCCAGAGATGCCATCCATCCCATGACATCTCACCAAGCGTTCTGGCTAGGCCCAAGGGGTAGCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAAGCACCCGGCTCCCATGTCTTAGAGGAGCCTTTCATATTTCTCGATCACCGCACAGGCAGAGCTTaGCTCACTGTGGTAGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LQAPGSHVLEEPFIFLDHRTGRA*LTVVAP Trigger: TGGGGCTACCACAGTGAGCAAAGCTCTGCCTGTGCG...GTGATCGAGAAATATGAAAGGCTCCTCTAAGACATGGGAGCCGGGTGCTTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR CCA 72 bp | GTCATGGGATGGATGGCATCTCTGGGTCAGGAGCACTaGAGAAGACTCAGAGACCTAGCCCTGCATTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: VMGWMASLGQEH*RRLRDLALHSC Trigger: GCATGAATGCAGGGCTAGGTCTCTGAGTCTTCTCCAGTGCTCCTGACCCAGAGATGCCATCCATCCCATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
||
| 3UTR CCA 72 bp | AGATGGAGGTGGGTGGGCTGGTGTCAAAGAAGGGCGTaGTCTTGGAGTTCAGCTCTGAAGACTGGTGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RWRWVGWCQRRA*SWSSALKTGGE Trigger: TTCTCCACCAGTCTTCAGAGCTGAACTCCAAGACCACGCCCTTCTTTGACACCAGCCCACCCACCTCCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR TCA 72 bp | TGGGATAGCTTTGGGGAGGGTGGAATGAGGATCAGCTaGGCTGCAGTGTTTAGCACAGTGACAGCGTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: WDSFGEGGMRIS*AAVFSTVTASS Trigger: TGAGGACGCTGTCACTGTGCTAAACACTGCAGCTCAGCTGATCCTCATTCCACCCTCCCCAAAGCTATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR GCA 72 bp | AGGGTAAGTAATGAAGAGTGGAGTCTGCAGCCAGGCTaGCTGAGCTCACATCCGAGTCCTGACTCTTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: RVSNEEWSLQPG*LSSHPSPDSCL Trigger: CAAGCAAGAGTCAGGACTCGGATGTGAGCTCAGGCAGCCTGGCTGCAGACTCCACTCTTCATTACTTACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR CCA 72 bp | CTAGCCAGAACGCTTGGTGAGATGTCATGGGATGGATaGCATCTCTGGGTCAGGAGCACTGGAGAAGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: LARTLGEMSWDG*HLWVRSTGEDS Trigger: TGAGTCTTCTCCAGTGCTCCTGACCCAGAGATGCCATCCATCCCATGACATCTCACCAAGCGTTCTGGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
||
| 3UTR CCA 72 bp | CCCTCAGTGGGAGTCCCTCCCAGCCAGATGGCAAGATaGTCCCACTCTCTTACCTTCTTTTATCTAGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PSVGVPPSQMAR*SHSLTFFYLVP Trigger: AGGCACTAGATAAAAGAAGGTAAGAGAGTGGGACCATCTTGCCATCTGGCTGGGAGGGACTCCCACTGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR TCA 72 bp | TCTTCCTCTTGGTCCCATACGCCAGCAGCTGTCCCATaGAATTCATGCAGACAGAGTCCACTCAGACCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SSSWSHTPAAVP*NSCRQSPLRPM Trigger: CATGGGTCTGAGTGGACTCTGTCTGCATGAATTTCATGGGACAGCTGCTGGCGTATGGGACCAAGAGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR GCA 72 bp | GAGGTCTTTCTCTCCAGGAACCTTCACACTAGGAGGTaGTTCCTCCCTACTGCCACCACTGGAAACAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: EVFLSRNLHTRR*FLPTATTGNNL Trigger: CAAGTTGTTTCCAGTGGTGGCAGTAGGGAGGAAGCACCTCCTAGTGTGAAGGTTCCTGGAGAGAAAGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR-3UTR CAA 90 bp | CACCAAATCCAAAACAAATGCCAGGTGCCTGATGTACTGTTTAGGGAACAGTGGGGAAACAACTTGCCCTaGCTGTGTGTGCTTGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HQIQNKCQVPDVLFREQWGNNLP*LCVLGP Trigger: TGGCCCAAGCACACACAGCAAGGGCAAGTTGTTTCC...CCACTGTTCCCTAAACAGTACATCAGGCACCTGGCATTTGTTTTGGATTTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR TCA 72 bp | ACAGTACCTGGCACACGGTGTGAACACTTGTGTGAGTaGGGAATTAGAGGTTGGTGTGGTCATTTCACCATT | + |
|
Preference number: 3 (lower is better) Translates to: TVPGTRCEHLCE*GIRGWCGHFTI Trigger: AATGGTGAAATGACCACACCAACCTCTAATTCCTCACTCACACAAGTGTTCACACCGTGTGCCAGGTACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR TCA 72 bp | CTCCCTGAGGATAAAGCCATCTCAGACAGTAAAAGATaGCGTGAAGGTAACACCACCAATTGGACCACATTG | + |
|
Preference number: 3 (lower is better) Translates to: LPEDKAISDSKR*REGNTTNWTTL Trigger: CAATGTGGTCCAATTGGTGGTGTTACCTTCACGTCATCTTTTACTGTCTGAGATGGCTTTATCCTCAGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR GCA 72 bp | GAACCATCTCTAAAAATCCACCAAATCCAAAACAAATaGCAGGTGCCTGATGTACTGTTTAGGGAACAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: EPSLKIHQIQNK*QVPDVLFREQW Trigger: CCACTGTTCCCTAAACAGTACATCAGGCACCTGGCATTTGTTTTGGATTTGGTGGATTTTTAGAGATGGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR GCA 72 bp | CCTTTAAGCCAAGGGGTGGACAATGTACACAGAACCTaGAAGAACACTACATACTTTGAACCATCTCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PLSQGVDNVHRT*KNTTYFEPSLK Trigger: TTTTAGAGATGGTTCAAAGTATGTAGTGTTCTTGCAGGTTCTGTGTACATTGTCCACCCCTTGGCTTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR TCA 72 bp | CAATGTACACAGAACCTGCAAGAACACTACATACTTTaGACCATCTCTAAAAATCCACCAAATCCAAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: QCTQNLQEHYIL*TISKNPPNPKQ Trigger: TTGTTTTGGATTTGGTGGATTTTTAGAGATGGTTCAAAGTATGTAGTGTTCTTGCAGGTTCTGTGTACATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR TCA 90 bp | CCTGCTCCTCGCCTGTGGGGGTGGAGGACCAGGACCCTTCTCCCGAGTCCACGGAGAAGAAAGTCTGCTTaGCGCGCGCCAGCAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PAPRLWGWRTRTLLPSPRRRKSA*RAPAAA Trigger: TGCCGCTGCTGGCGCGCGTCAAGCAGACTTTCTTCT...CCGTGGACTCGGGAGAAGGGTCCTGGTCCTCCACCCCCACAGGCGAGGAGCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR CCA 90 bp | GCTTGCAGCAGGCCGGCCGAACACAGACTCACAGAGCGGACACCGAGGACAGACAGCAGCGGCAGCGGCTaGTGTGAGTCCCGCGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ACSRPAEHRLTERTPRTDSSGSG*CESRGD Trigger: ATCGCCGCGGGACTCACACCAGCCGCTGCCGCTGCT...GTCTGTCCTCGGTGTCCGCTCTGTGAGTCTGTGTTCGGCCGGCCTGCTGCAAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR GCA 90 bp | CCTGCTCCTCGCCTGTGGGGGTGGAGGACCAGGACCCTTCTCCCGAGTCCACGGGCTTCCAGCACTTCCTaGCAGCCAAGTCCAGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: PAPRLWGWRTRTLLPSPRASSTS*QPSPVT Trigger: GGTGACTGGACTTGGCTGGCAGGAAGTGCTGGAAGC...CCGTGGACTCGGGAGAAGGGTCCTGGTCCTCCACCCCCACAGGCGAGGAGCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR GCA 90 bp | AGAGAAAAGGGGCACAAGGGTGGTGTCAGGAGTCCAGGCCTCTGGAGAGATGGACCTGGCGACAGCGCCTaGAGAGAGGCAGCAGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: REKGHKGGVRSPGLWRDGPGDSA*REAAAR Trigger: GCGCGCTGCTGCCTCTCTGCAGGCGCTGTCGCCAGG...TCCATCTCTCCAGAGGCCTGGACTCCTGACACCACCCTTGTGCCCCTTTTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR GCA 90 bp | CTCCCGAGTCCACGGACTAAGGCACCAGGTGGCTTGCAGCAGGCCGGCCGAACAAGGCAGAAGAAAGTCTaGTTGACGCGCGCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSPRTKAPGGLQQAGRTRQKKV*LTRASS Trigger: GCTGCTGGCGCGCGTCAAGCAGACTTTCTTCTGCCT...TGTTCGGCCGGCCTGCTGCAAGCCACCTGGTGCCTTAGTCCGTGGACTCGGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR TCA 90 bp | GGATGCAGGGGGACTTCCTGCCCTCAGTGGGAGTCCCTCCCAGCCAGATGGCAATTATTCCGGCCCAGCTaGTCCGGGTCTTTGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GCRGTSCPQWESLPARWQLFRPS*SGSLAS Trigger: TGATGCCAAAGACCCGGATCAGCTGGGCCGGAATAA...TTGCCATCTGGCTGGGAGGGACTCCCACTGAGGGCAGGAAGTCCCCCTGCATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR TCA 90 bp | ACCAATCCGAGGCGTGCTGTCCCTCCAAGCACCCGGCTCCCATGTCTTAGAGGATGGGCCGGGAGGCTTTaGTGGCTTCCAGCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TNPRRAVPPSTRLPCLRGWAGRL*WLPALP Trigger: AGGAAGTGCTGGAAGCCATCAAAGCCTCCCGGCCCA...TCCTCTAAGACATGGGAGCCGGGTGCTTGGAGGGACAGCACGCCTCGGATTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGAGGGCAGCGTCTGGAGGGATCTGGATCTGGAAACCAAAGGGTTTCCTCCGAGGAAGCTGTGGTaGCCGACGCTGCCGATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FREGSVWRDLDLETKGFPPRKLW*PTLPMS Trigger: CGACATCGGCAGCGTCGGCCACCACAGCTTCCTCGG...AGGAAACCCTTTGGTTTCCAGATCCAGATCCCTCCAGACGCTGCCCTCCCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR GCA 90 bp | TGGGTGGGCTGGTGTCAAAGAAGGGCGTGGTCTTGGAGTTCAGCTCTGAAGACTAAGCGCTCCTCCAGCTaGCGGCGAAGCTTCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WVGWCQRRAWSWSSALKTKRSSS*RRSFWE Trigger: CTCCCAGAAGCTTCGCCGGCAGCTGGAGGAGCGCTT...AGTCTTCAGAGCTGAACTCCAAGACCACGCCCTTCTTTGACACCAGCCCACCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR CCA 90 bp | ACACTAGGAGGTGCTTCCTCCCTACTGCCACCACTGGAAACAACTTGCCCTTGCCCTAAAGCCCGGGTTTaGGTTGGCGATGGGCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLGGASSLLPPLETTCPCPKARV*VGDGPG Trigger: TCCCGGCCCATCGCCAACCCAAACCCGGGCTTTAGG...GCAAGGGCAAGTTGTTTCCAGTGGTGGCAGTAGGGAGGAAGCACCTCCTAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR TCA 90 bp | GCTTGCAGCAGGCCGGCCGAACACAGACTCACAGAGCGGACACCGAGGACAGACAGATTCGAAGGTAGGTaGTATCCTGCAACAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ACSRPAEHRLTERTPRTDRFEGR*YPATEA Trigger: AGCCTCTGTTGCAGGATATCACCTACCTTCGAATCT...GTCTGTCCTCGGTGTCCGCTCTGTGAGTCTGTGTTCGGCCGGCCTGCTGCAAGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR CAA 72 bp | GAGGTGGGTGGGCTGGTGTCAAAGAAGGGCGTGGTCTaGGAGTTCAGCTCTGAAGACTGGTGGAGAATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EVGGLVSKKGVV*EFSSEDWWRMA Trigger: CGCCATTCTCCACCAGTCTTCAGAGCTGAACTCCAAGACCACGCCCTTCTTTGACACCAGCCCACCCACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR CAA 72 bp | TGCCTCCCCATCGGCCATGAAGCCCCAAGAGTCTACTaGGGCTCTTTCAGGTCGGCAGCTCTGATGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: CLPIGHEAPRVY*GSFRSAALMTH Trigger: GTGTGTCATCAGAGCTGCCGACCTGAAAGAGCCCAAGTAGACTCTTGGGGCTTCATGGCCGATGGGGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR TCA 90 bp | GGGATGGATGGCATCTCTGGGTCAGGAGCACTGGAGAAGACTCAGAGACCTAGCTTATTCCGGCCCAGCTaGTCCGGGTCTTTGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GMDGISGSGALEKTQRPSLFRPS*SGSLAS Trigger: AGATGCCAAAGACCCGGATCAGCTGGGCCGGAATAA...GCTAGGTCTCTGAGTCTTCTCCAGTGCTCCTGACCCAGAGATGCCATCCATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
||
| CDS-3UTR GCA 90 bp | GGATGCAGGGGGACTTCCTGCCCTCAGTGGGAGTCCCTCCCAGCCAGATGGCAAACTTCGAGATATACCTaGAAAGCAGTGCACAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCRGTSCPQWESLPARWQTSRYT*KAVHKA Trigger: TGCCTTGTGCACTGCTTTGCAGGTATATCTCGAAGT...TTGCCATCTGGCTGGGAGGGACTCCCACTGAGGGCAGGAAGTCCCCCTGCATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR CAA 72 bp | CTTCCACTAGAATGTCAGCATCGCACAGGCAGAGCTTaGCTCACTGTGGTAGCCCCAGAGCCCAGCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPLECQHRTGRA*LTVVAPEPSTV Trigger: TACTGTGCTGGGCTCTGGGGCTACCACAGTGAGCAAAGCTCTGCCTGTGCGATGCTGACATTCTAGTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR CAA 72 bp | AGCACCGGTGGGAGGGCATTCTTATTCCTCTTCCTCTaGGTCCCATACGCCAGCAGCTGTCCCATGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: STGGRAFLFLFL*VPYASSCPMKF Trigger: GAATTTCATGGGACAGCTGCTGGCGTATGGGACCAAGAGGAAGAGGAATAAGAATGCCCTCCCACCGGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR TCA 90 bp | ATGGCATCTCTGGGTCAGGAGCACTGGAGAAGACTCAGAGACCTAGCCCTGCATCAACAGAGGCTGGGGTaGTTCGTGGATAGAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: MASLGQEHWRRLRDLALHQQRLG*FVDRDD Trigger: ATCATCTCTATCCACGAATCACCCCAGCCTCTGTTG...ATGCAGGGCTAGGTCTCTGAGTCTTCTCCAGTGCTCCTGACCCAGAGATGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
||
| CDS-3UTR TCA 90 bp | GATGGCATCTCTGGGTCAGGAGCACTGGAGAAGACTCAGAGACCTAGCCCTGCAAGATTCGAAGGTAGGTaGTATCCTGCAACAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGISGSGALEKTQRPSPARFEGR*YPATEA Trigger: AGCCTCTGTTGCAGGATATCACCTACCTTCGAATCT...TGCAGGGCTAGGTCTCTGAGTCTTCTCCAGTGCTCCTGACCCAGAGATGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
||
| CDS-3UTR CCA 90 bp | CGCTTGGTGAGATGTCATGGGATGGATGGCATCTCTGGGTCAGGAGCACTGGAGGGCTGGGGTGATTCGTaGATAGAGATGATATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLVRCHGMDGISGSGALEGWGDS*IEMICV Trigger: CACACATATCATCTCTATCCACGAATCACCCCAGCC...CTCCAGTGCTCCTGACCCAGAGATGCCATCCATCCCATGACATCTCACCAAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
||
| CDS-3UTR CCA 90 bp | AGAGAAAAGGGGCACAAGGGTGGTGTCAGGAGTCCAGGCCTCTGGAGAGATGGAGGCTGGGGTGATTCGTaGATAGAGATGATATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: REKGHKGGVRSPGLWRDGGWGDS*IEMICV Trigger: CACACATATCATCTCTATCCACGAATCACCCCAGCC...TCCATCTCTCCAGAGGCCTGGACTCCTGACACCACCCTTGTGCCCCTTTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| 3UTR CAA 72 bp | AGTGAGGAATTAGAGGTTGGTGTGGTCATTTCACCATaGGCTCAGCCCAGTGCTGAGATCTCTGCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEELEVGVVISP*AQPSAEISASP Trigger: TGGGGAGGCAGAGATCTCAGCACTGGGCTGAGCCAATGGTGAAATGACCACACCAACCTCTAATTCCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR TCA 90 bp | AGAGAAAAGGGGCACAAGGGTGGTGTCAGGAGTCCAGGCCTCTGGAGAGATGGAAGGAGTATCAGACACTaGGATTCGAAGGTAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: REKGHKGGVRSPGLWRDGRSIRH*DSKVGD Trigger: ATCACCTACCTTCGAATCTCAGTGTCTGATACTCCT...TCCATCTCTCCAGAGGCCTGGACTCCTGACACCACCCTTGTGCCCCTTTTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR TCA 90 bp | AAGATAGACTGTGGGTTTGAGGAAGGGGAGGTTAGGATGGCTAAATATGGGGAGTTATTCCGGCCCAGCTaGTCCGGGTCTTTGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KIDCGFEEGEVRMAKYGELFRPS*SGSLAS Trigger: TGATGCCAAAGACCCGGATCAGCTGGGCCGGAATAA...CTCCCCATATTTAGCCATCCTAACCTCCCCTTCCTCAAACCCACAGTCTATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
||
| CDS-3UTR GCA 90 bp | AAGATAGACTGTGGGTTTGAGGAAGGGGAGGTTAGGATGGCTAAATATGGGGAGTGCTTCAAAGGCCAGTaGACAAGGCAGTTACCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KIDCGFEEGEVRMAKYGECFKGQ*TRQLPP Trigger: CGGGGGTAACTGCCTTGTGCACTGGCCTTTGAAGCA...CTCCCCATATTTAGCCATCCTAACCTCCCCTTCCTCAAACCCACAGTCTATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
||
| CDS-3UTR TCA 90 bp | AGCACCCGGCTCCCATGTCTTAGAGGAGCCTTTCATATTTCTCGATCACAAAGGCAACAGAGGCTGGGGTaGTTCGTGGATAGAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: STRLPCLRGAFHISRSQRQQRLG*FVDRDD Trigger: ATCATCTCTATCCACGAATCACCCCAGCCTCTGTTG...CCTTTGTGATCGAGAAATATGAAAGGCTCCTCTAAGACATGGGAGCCGGGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCATGGGATGGATGGCATCTCTGGGTCAGGAGCACTGGAGAAGACTCAGAGAGGAGTATCAGACACTaGGATTCGAAGGTAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: MSWDGWHLWVRSTGEDSERSIRH*DSKVGD Trigger: ATCACCTACCTTCGAATCTCAGTGTCTGATACTCCT...CTCTGAGTCTTCTCCAGTGCTCCTGACCCAGAGATGCCATCCATCCCATGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
||
| CDS-3UTR CCA 90 bp | AGATGTCATGGGATGGATGGCATCTCTGGGTCAGGAGCACTGGAGAAGACTCAGCAGGAGTGGATAAAGTaGACGCATTCTTTGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RCHGMDGISGSGALEKTQQEWIK*THSLKC Trigger: GCACTTCAAAGAATGCGTCCACTTTATCCACTCCTG...CTGAGTCTTCTCCAGTGCTCCTGACCCAGAGATGCCATCCATCCCATGACATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
||
| CDS-3UTR TCA 90 bp | AAGATAGACTGTGGGTTTGAGGAAGGGGAGGTTAGGATGGCTAAATATGGGGAGCAACAGAGGCTGGGGTaGTTCGTGGATAGAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: KIDCGFEEGEVRMAKYGEQQRLG*FVDRDD Trigger: ATCATCTCTATCCACGAATCACCCCAGCCTCTGTTG...CTCCCCATATTTAGCCATCCTAACCTCCCCTTCCTCAAACCCACAGTCTATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
||
| CDS-3UTR GCA 90 bp | ATGGCATCTCTGGGTCAGGAGCACTGGAGAAGACTCAGAGACCTAGCCCTGCATACGCATTCTTTGAAGTaGTTTTTGATGGGTACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MASLGQEHWRRLRDLALHTHSLK*FLMGTS Trigger: TGAGGTACCCATCAAAAAGCACTTCAAAGAATGCGT...ATGCAGGGCTAGGTCTCTGAGTCTTCTCCAGTGCTCCTGACCCAGAGATGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
||
| CDS-3UTR GCA 90 bp | AAGATAGACTGTGGGTTTGAGGAAGGGGAGGTTAGGATGGCTAAATATGGGGAGCTAGCCCTGCATTCATaGTTCAAAGGCCAGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KIDCGFEEGEVRMAKYGELALHS*FKGQCT Trigger: TGTGCACTGGCCTTTGAAGCATGAATGCAGGGCTAG...CTCCCCATATTTAGCCATCCTAACCTCCCCTTCCTCAAACCCACAGTCTATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
||
| CDS-3UTR TCA 90 bp | AAGATAGACTGTGGGTTTGAGGAAGGGGAGGTTAGGATGGCTAAATATGGGGAGAGATTCGAAGGTAGGTaGTATCCTGCAACAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KIDCGFEEGEVRMAKYGERFEGR*YPATEA Trigger: AGCCTCTGTTGCAGGATATCACCTACCTTCGAATCT...CTCCCCATATTTAGCCATCCTAACCTCCCCTTCCTCAAACCCACAGTCTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
||
| CDS-3UTR CCA 90 bp | AAGATAGACTGTGGGTTTGAGGAAGGGGAGGTTAGGATGGCTAAATATGGGGAGGGCTGGGGTGATTCGTaGATAGAGATGATATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KIDCGFEEGEVRMAKYGEGWGDS*IEMICV Trigger: CACACATATCATCTCTATCCACGAATCACCCCAGCC...CTCCCCATATTTAGCCATCCTAACCTCCCCTTCCTCAAACCCACAGTCTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
||
| CDS-3UTR TCA 90 bp | AAGATAGACTGTGGGTTTGAGGAAGGGGAGGTTAGGATGGCTAAATATGGGGAGAGGAGTATCAGACACTaGGATTCGAAGGTAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KIDCGFEEGEVRMAKYGERSIRH*DSKVGD Trigger: ATCACCTACCTTCGAATCTCAGTGTCTGATACTCCT...CTCCCCATATTTAGCCATCCTAACCTCCCCTTCCTCAAACCCACAGTCTATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
||
| CDS-3UTR GCA 90 bp | CTCCAAGCACCCGGCTCCCATGTCTTAGAGGAGCCTTTCATATTTCTCGATCACACGCATTCTTTGAAGTaGTTTTTGATGGGTACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQAPGSHVLEEPFIFLDHTHSLK*FLMGTS Trigger: TGAGGTACCCATCAAAAAGCACTTCAAAGAATGCGT...GTGATCGAGAAATATGAAAGGCTCCTCTAAGACATGGGAGCCGGGTGCTTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR CCA 90 bp | AAGATAGACTGTGGGTTTGAGGAAGGGGAGGTTAGGATGGCTAAATATGGGGAGCAGGAGTGGATAAAGTaGACGCATTCTTTGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KIDCGFEEGEVRMAKYGEQEWIK*THSLKC Trigger: GCACTTCAAAGAATGCGTCCACTTTATCCACTCCTG...CTCCCCATATTTAGCCATCCTAACCTCCCCTTCCTCAAACCCACAGTCTATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
||
| CDS-3UTR GCA 90 bp | AAGATAGACTGTGGGTTTGAGGAAGGGGAGGTTAGGATGGCTAAATATGGGGAGACGCATTCTTTGAAGTaGTTTTTGATGGGTACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KIDCGFEEGEVRMAKYGETHSLK*FLMGTS Trigger: TGAGGTACCCATCAAAAAGCACTTCAAAGAATGCGT...CTCCCCATATTTAGCCATCCTAACCTCCCCTTCCTCAAACCCACAGTCTATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
||
| CDS CCA 90 bp | GCGGCACCAGGCGCTGCAGGGTCCCCTCAGCGGCCGAGGAAGCTGTaGTGGCCGACGCTGCCGATGTCGCCGAGCCCTGGCGACAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAPGAAGSPQRPRKL*WPTLPMSPSPGDSA Trigger: GGCGCTGTCGCCAGGGCTCGGCGACATCGGCAGCGTCGGCCACCACAGCTTCCTCGGCCGCTGAGGGGACCCTGCAGCGCCTGGTGCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS GCA 90 bp | GGCAGCGGCTGGTGTGAGTCCCGCGGCGATCGCGGCACCAGGCGCTaGAGGGTCCCCTCAGCGGCCGAGGAAGCTGTGGTGGCCGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSGWCESRGDRGTRR*RVPSAAEEAVVADA Trigger: AGCGTCGGCCACCACAGCTTCCTCGGCCGCTGAGGGGACCCTGCAGCGCCTGGTGCCGCGATCGCCGCGGGACTCACACCAGCCGCTGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS CCA 90 bp | GCACCAGGCGCTGCAGGGTCCCCTCAGCGGCCGAGGAAGCTGTGGTaGCCGACGCTGCCGATGTCGCCGAGCCCTGGCGACAGCGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: APGAAGSPQRPRKLW*PTLPMSPSPGDSAC Trigger: GCAGGCGCTGTCGCCAGGGCTCGGCGACATCGGCAGCGTCGGCCACCACAGCTTCCTCGGCCGCTGAGGGGACCCTGCAGCGCCTGGTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS TCA 90 bp | CGCCCTTGCGCGACAGGCACCGCGGGAGGCAGAAGAAAGTCTGCTTaGCGCGCGCCAGCAGCGGCAGCGGCTGGTGTGAGTCCCGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RPCATGTAGGRRKSA*RAPAAAAAGVSPAA Trigger: CGCCGCGGGACTCACACCAGCCGCTGCCGCTGCTGGCGCGCGTCAAGCAGACTTTCTTCTGCCTCCCGCGGTGCCTGTCGCGCAAGGGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS GCA 90 bp | TGGTGGCCGACGCTGCCGATGTCGCCGAGCCCTGGCGACAGCGCCTaGAGAGAGGCAGCAGCGCGCGCAAGTCTTCCTCGTCGCGGAACG | + |
|
Preference number: 5 (lower is better) Translates to: WWPTLPMSPSPGDSA*REAAARASLPRRGT Trigger: CGTTCCGCGACGAGGAAGACTTGCGCGCGCTGCTGCCTCTCTGCAGGCGCTGTCGCCAGGGCTCGGCGACATCGGCAGCGTCGGCCACCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS CCA 90 bp | GCCGAGGAAGCTGTGGTGGCCGACGCTGCCGATGTCGCCGAGCCCTaGCGACAGCGCCTGCAGAGAGGCAGCAGCGCGCGCAAGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AEEAVVADAADVAEP*RQRLQRGSSARKSS Trigger: GGAAGACTTGCGCGCGCTGCTGCCTCTCTGCAGGCGCTGTCGCCAGGGCTCGGCGACATCGGCAGCGTCGGCCACCACAGCTTCCTCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS GCA 90 bp | TTGCCGCCCTTGCGCGACAGGCACCGCGGGAGGCAGAAGAAAGTCTaGTTGACGCGCGCCAGCAGCGGCAGCGGCTGGTGTGAGTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LPPLRDRHRGRQKKV*LTRASSGSGWCESR Trigger: GCGGGACTCACACCAGCCGCTGCCGCTGCTGGCGCGCGTCAAGCAGACTTTCTTCTGCCTCCCGCGGTGCCTGTCGCGCAAGGGCGGCAA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS CCA 90 bp | AGGCAGAAGAAAGTCTGCTTGACGCGCGCCAGCAGCGGCAGCGGCTaGTGTGAGTCCCGCGGCGATCGCGGCACCAGGCGCTGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RQKKVCLTRASSGSG*CESRGDRGTRRCRV Trigger: GACCCTGCAGCGCCTGGTGCCGCGATCGCCGCGGGACTCACACCAGCCGCTGCCGCTGCTGGCGCGCGTCAAGCAGACTTTCTTCTGCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS GCA 90 bp | TGCCGGCGAAGCTTCTGGGAGTTTGCCCAGCCAAACTCCTCGAGCTaGTGCCTAAAGCCCGGGTTTGGGTTGGCGATGGGCCGGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CRRSFWEFAQPNSSS*CLKPGFGLAMGREA Trigger: AGCCTCCCGGCCCATCGCCAACCCAAACCCGGGCTTTAGGCAGCAGCTCGAGGAGTTTGGCTGGGCAAACTCCCAGAAGCTTCGCCGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS GCA 90 bp | CGGCGAAGCTTCTGGGAGTTTGCCCAGCCAAACTCCTCGAGCTGCTaGCTAAAGCCCGGGTTTGGGTTGGCGATGGGCCGGGAGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRSFWEFAQPNSSSC*LKPGFGLAMGREAL Trigger: CAAAGCCTCCCGGCCCATCGCCAACCCAAACCCGGGCTTTAGGCAGCAGCTCGAGGAGTTTGGCTGGGCAAACTCCCAGAAGCTTCGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS CCA 90 bp | GTTTGCCCAGCCAAACTCCTCGAGCTGCTGCCTAAAGCCCGGGTTTaGGTTGGCGATGGGCCGGGAGGCTTTGATGGCTTCCAGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VCPAKLLELLPKARV*VGDGPGGFDGFQHF Trigger: GAAGTGCTGGAAGCCATCAAAGCCTCCCGGCCCATCGCCAACCCAAACCCGGGCTTTAGGCAGCAGCTCGAGGAGTTTGGCTGGGCAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR CAA 90 bp | ATGTCAGCATCGCACAGGCAGAGCTTTGCTCACTGTGGTAGCCCCAGAGCCCAGATGGGCCGGGAGGCTTaGATGGCTTCCAGCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MSASHRQSFAHCGSPRAQMGREA*MASSTS Trigger: GGAAGTGCTGGAAGCCATCAAAGCCTCCCGGCCCAT...CTGGGCTCTGGGGCTACCACAGTGAGCAAAGCTCTGCCTGTGCGATGCTGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR CAA 90 bp | ACACTAGGAGGTGCTTCCTCCCTACTGCCACCACTGGAAACAACTTGCCCTTGCCAGAAGAAAGTCTGCTaGACGCGCGCCAGCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLGGASSLLPPLETTCPCQKKVC*TRASSG Trigger: GCCGCTGCTGGCGCGCGTCAAGCAGACTTTCTTCTG...GCAAGGGCAAGTTGTTTCCAGTGGTGGCAGTAGGGAGGAAGCACCTCCTAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR CAA 90 bp | GGATGCAGGGGGACTTCCTGCCCTCAGTGGGAGTCCCTCCCAGCCAGATGGCAATCTTTGAAGTGCTTTTaGATGGGTACCTCAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GCRGTSCPQWESLPARWQSLKCF*MGTSGV Trigger: TACTCCTGAGGTACCCATCAAAAAGCACTTCAAAGA...TTGCCATCTGGCTGGGAGGGACTCCCACTGAGGGCAGGAAGTCCCCCTGCATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS GCA 90 bp | AGAAGACTCAGAGACCTAGCCCTGCATTCATGCTTCAAAGGCCAGTaGACAAGGCAGTTACCCCCGTTGAGGCGGCAGGAGTGGATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRLRDLALHSCFKGQ*TRQLPPLRRQEWIK Trigger: CTTTATCCACTCCTGCCGCCTCAACGGGGGTAACTGCCTTGTGCACTGGCCTTTGAAGCATGAATGCAGGGCTAGGTCTCTGAGTCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
||
| CDS CCA 90 bp | AAAGGCCAGTGCACAAGGCAGTTACCCCCGTTGAGGCGGCAGGAGTaGATAAAGTGGACGCATTCTTTGAAGTGCTTTTTGATGGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: KGQCTRQLPPLRRQE*IKWTHSLKCFLMGT Trigger: GGTACCCATCAAAAAGCACTTCAAAGAATGCGTCCACTTTATCCACTCCTGCCGCCTCAACGGGGGTAACTGCCTTGTGCACTGGCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037715.7 ENSMUST00000109811.4 |
||
| CDS CCA 90 bp | GCAAAGCAGTGCACAAGGCAGTTACCCCCGTTGAGGCGGCAGGAGTaGATAAAGTGGACGCATTCTTTGAAGTGCTTTTTGATGGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: AKQCTRQLPPLRRQE*IKWTHSLKCFLMGT Trigger: GGTACCCATCAAAAAGCACTTCAAAGAATGCGTCCACTTTATCCACTCCTGCCGCCTCAACGGGGGTAACTGCCTTGTGCACTGCTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS CCA 90 bp | TGCACAAGGCAGTTACCCCCGTTGAGGCGGCAGGAGTGGATAAAGTaGACGCATTCTTTGAAGTGCTTTTTGATGGGTACCTCAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CTRQLPPLRRQEWIK*THSLKCFLMGTSGV Trigger: TACTCCTGAGGTACCCATCAAAAAGCACTTCAAAGAATGCGTCCACTTTATCCACTCCTGCCGCCTCAACGGGGGTAACTGCCTTGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000037715.7 ENSMUST00000109811.4 ENSMUST00000123121.9 |
||
| CDS CCA 90 bp | GCCAGCCAAGTCCAGTCACCGTCATCACATAGGCGATCACTATGGTaGTACTTCGAGATATACCTGCAAAGCAGTGCACAAGGCAGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: ASQVQSPSSHRRSLW*YFEIYLQSSAQGSY Trigger: GTAACTGCCTTGTGCACTGCTTTGCAGGTATATCTCGAAGTACCACCATAGTGATCGCCTATGTGATGACGGTGACTGGACTTGGCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR CAA 90 bp | GGATGGATGGCATCTCTGGGTCAGGAGCACTGGAGAAGACTCAGAGACCTAGCCAAGTGGACGCATTCTTaGAAGTGCTTTTTGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GWMASLGQEHWRRLRDLAKWTHS*KCFLMG Trigger: ACCCATCAAAAAGCACTTCAAAGAATGCGTCCACTT...GGCTAGGTCTCTGAGTCTTCTCCAGTGCTCCTGACCCAGAGATGCCATCCATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
||
| CDS-3UTR CAA 90 bp | AGATGTCATGGGATGGATGGCATCTCTGGGTCAGGAGCACTGGAGAAGACTCAGTCTTTGAAGTGCTTTTaGATGGGTACCTCAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RCHGMDGISGSGALEKTQSLKCF*MGTSGV Trigger: TACTCCTGAGGTACCCATCAAAAAGCACTTCAAAGA...CTGAGTCTTCTCCAGTGCTCCTGACCCAGAGATGCCATCCATCCCATGACATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
||
| CDS-3UTR CAA 90 bp | GTGGACAATGTACACAGAACCTGCAAGAACACTACATACTTTGAACCATCTCTAGAAGCTTCTGGGAGTTaGCCCAGCCAAACTCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VDNVHRTCKNTTYFEPSLEASGS*PSQTPR Trigger: TCGAGGAGTTTGGCTGGGCAAACTCCCAGAAGCTTC...TAGAGATGGTTCAAAGTATGTAGTGTTCTTGCAGGTTCTGTGTACATTGTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS-3UTR CAA 90 bp | AAGATAGACTGTGGGTTTGAGGAAGGGGAGGTTAGGATGGCTAAATATGGGGAGTCTTTGAAGTGCTTTTaGATGGGTACCTCAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KIDCGFEEGEVRMAKYGESLKCF*MGTSGV Trigger: TACTCCTGAGGTACCCATCAAAAAGCACTTCAAAGA...CTCCCCATATTTAGCCATCCTAACCTCCCCTTCCTCAAACCCACAGTCTATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
||
| CDS-3UTR CAA 90 bp | AAGATAGACTGTGGGTTTGAGGAAGGGGAGGTTAGGATGGCTAAATATGGGGAGAAGTGGACGCATTCTTaGAAGTGCTTTTTGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KIDCGFEEGEVRMAKYGEKWTHS*KCFLMG Trigger: ACCCATCAAAAAGCACTTCAAAGAATGCGTCCACTT...CTCCCCATATTTAGCCATCCTAACCTCCCCTTCCTCAAACCCACAGTCTATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
||
| CDS CCA 72 bp | GCTGTGGTGGCCGACGCTGCCGATGTCGCCGAGCCCTaGCGACAGCGCCTGCAGAGAGGCAGCAGCGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AVVADAADVAEP*RQRLQRGSSAR Trigger: GCGCGCGCTGCTGCCTCTCTGCAGGCGCTGTCGCCAGGGCTCGGCGACATCGGCAGCGTCGGCCACCACAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS CCA 72 bp | GGCGCTGCAGGGTCCCCTCAGCGGCCGAGGAAGCTGTaGTGGCCGACGCTGCCGATGTCGCCGAGCCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GAAGSPQRPRKL*WPTLPMSPSPG Trigger: GCCAGGGCTCGGCGACATCGGCAGCGTCGGCCACCACAGCTTCCTCGGCCGCTGAGGGGACCCTGCAGCGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS CAA 90 bp | CCGCCCTTGCGCGACAGGCACCGCGGGAGGCAGAAGAAAGTCTGCTaGACGCGCGCCAGCAGCGGCAGCGGCTGGTGTGAGTCCCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPLRDRHRGRQKKVC*TRASSGSGWCESRG Trigger: GCCGCGGGACTCACACCAGCCGCTGCCGCTGCTGGCGCGCGTCAAGCAGACTTTCTTCTGCCTCCCGCGGTGCCTGTCGCGCAAGGGCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS GCA 72 bp | TGGTGTGAGTCCCGCGGCGATCGCGGCACCAGGCGCTaGAGGGTCCCCTCAGCGGCCGAGGAAGCTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WCESRGDRGTRR*RVPSAAEEAVV Trigger: CACCACAGCTTCCTCGGCCGCTGAGGGGACCCTGCAGCGCCTGGTGCCGCGATCGCCGCGGGACTCACACCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS CCA 72 bp | AAAGTCTGCTTGACGCGCGCCAGCAGCGGCAGCGGCTaGTGTGAGTCCCGCGGCGATCGCGGCACCAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: KVCLTRASSGSG*CESRGDRGTRR Trigger: GCGCCTGGTGCCGCGATCGCCGCGGGACTCACACCAGCCGCTGCCGCTGCTGGCGCGCGTCAAGCAGACTTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS GCA 72 bp | ACGCTGCCGATGTCGCCGAGCCCTGGCGACAGCGCCTaGAGAGAGGCAGCAGCGCGCGCAAGTCTTCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: TLPMSPSPGDSA*REAAARASLPR Trigger: ACGAGGAAGACTTGCGCGCGCTGCTGCCTCTCTGCAGGCGCTGTCGCCAGGGCTCGGCGACATCGGCAGCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS CAA 72 bp | CGCGACAGGCACCGCGGGAGGCAGAAGAAAGTCTGCTaGACGCGCGCCAGCAGCGGCAGCGGCTGGTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RDRHRGRQKKVC*TRASSGSGWCE Trigger: CTCACACCAGCCGCTGCCGCTGCTGGCGCGCGTCAAGCAGACTTTCTTCTGCCTCCCGCGGTGCCTGTCGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS GCA 72 bp | TTGCGCGACAGGCACCGCGGGAGGCAGAAGAAAGTCTaGTTGACGCGCGCCAGCAGCGGCAGCGGCTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LRDRHRGRQKKV*LTRASSGSGWC Trigger: ACACCAGCCGCTGCCGCTGCTGGCGCGCGTCAAGCAGACTTTCTTCTGCCTCCCGCGGTGCCTGTCGCGCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS GCA 72 bp | TCGCGGAACGGGATCTCCCCGAAGCGCTCCTCCAGCTaGCGGCGAAGCTTCTGGGAGTTTGCCCAGCCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SRNGISPKRSSS*RRSFWEFAQPN Trigger: GTTTGGCTGGGCAAACTCCCAGAAGCTTCGCCGGCAGCTGGAGGAGCGCTTCGGGGAGATCCCGTTCCGCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS CCA 72 bp | TCCCCGAAGCGCTCCTCCAGCTGCCGGCGAAGCTTCTaGGAGTTTGCCCAGCCAAACTCCTCGAGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPKRSSSCRRSF*EFAQPNSSSCC Trigger: GCAGCAGCTCGAGGAGTTTGGCTGGGCAAACTCCCAGAAGCTTCGCCGGCAGCTGGAGGAGCGCTTCGGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS TCA 72 bp | AGCCCGGGTTTGGGTTGGCGATGGGCCGGGAGGCTTTaGTGGCTTCCAGCACTTCCTGCCAGCCAAGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPGLGWRWAGRL*WLPALPASQVQ Trigger: CTGGACTTGGCTGGCAGGAAGTGCTGGAAGCCATCAAAGCCTCCCGGCCCATCGCCAACCCAAACCCGGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS GCA 72 bp | GCGCTCCTCCAGCTGCCGGCGAAGCTTCTGGGAGTTTaGCCAGCCAAACTCCTCGAGCTGCTGCCTAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALLQLPAKLLGV*PAKLLELLPKA Trigger: GGCTTTAGGCAGCAGCTCGAGGAGTTTGGCTGGGCAAACTCCCAGAAGCTTCGCCGGCAGCTGGAGGAGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS CAA 90 bp | TGCTGCCTAAAGCCCGGGTTTGGGTTGGCGATGGGCCGGGAGGCTTaGATGGCTTCCAGCACTTCCTGCCAGCCAAGTCCAGTCACCGTC | + |
|
Preference number: 6 (lower is better) Translates to: CCLKPGFGLAMGREA*MASSTSCQPSPVTV Trigger: GACGGTGACTGGACTTGGCTGGCAGGAAGTGCTGGAAGCCATCAAAGCCTCCCGGCCCATCGCCAACCCAAACCCGGGCTTTAGGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS CCA 72 bp | GCCAAACTCCTCGAGCTGCTGCCTAAAGCCCGGGTTTaGGTTGGCGATGGGCCGGGAGGCTTTGATGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AKLLELLPKARV*VGDGPGGFDGF Trigger: GAAGCCATCAAAGCCTCCCGGCCCATCGCCAACCCAAACCCGGGCTTTAGGCAGCAGCTCGAGGAGTTTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS GCA 72 bp | AGCTTCTGGGAGTTTGCCCAGCCAAACTCCTCGAGCTaGTGCCTAAAGCCCGGGTTTGGGTTGGCGATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SFWEFAQPNSSS*CLKPGFGLAMG Trigger: GCCCATCGCCAACCCAAACCCGGGCTTTAGGCAGCAGCTCGAGGAGTTTGGCTGGGCAAACTCCCAGAAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
||
| CDS GCA 72 bp | CACTGGAGAAGACTCAGAGACCTAGCCCTGCATTCATaGTTCAAAGGCCAGTGCACAAGGCAGTTACCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: HWRRLRDLALHS*FKGQCTRQLPP Trigger: CGGGGGTAACTGCCTTGTGCACTGGCCTTTGAAGCATGAATGCAGGGCTAGGTCTCTGAGTCTTCTCCAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037715.7 |
||
| CDS GCA 72 bp | ACTATGGTGGTACTTCGAGATATACCTGCAAAGCAGTaGACAAGGCAGTTACCCCCGTTGAGGCGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TMVVLRDIPAKQ*TRQLPPLRRQE Trigger: CTCCTGCCGCCTCAACGGGGGTAACTGCCTTGTGCACTGCTTTGCAGGTATATCTCGAAGTACCACCATAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| CDS CAA 72 bp | ATACCTGCAAAGCAGTGCACAAGGCAGTTACCCCCGTaGAGGCGGCAGGAGTGGATAAAGTGGACGCATTCT | + |
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Preference number: 6 (lower is better) Translates to: IPAKQCTRQLPP*RRQEWIKWTHS Trigger: AGAATGCGTCCACTTTATCCACTCCTGCCGCCTCAACGGGGGTAACTGCCTTGTGCACTGCTTTGCAGGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| CDS CCA 72 bp | CAGTTACCCCCGTTGAGGCGGCAGGAGTGGATAAAGTaGACGCATTCTTTGAAGTGCTTTTTGATGGGTACC | + |
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Preference number: 6 (lower is better) Translates to: QLPPLRRQEWIK*THSLKCFLMGT Trigger: GGTACCCATCAAAAAGCACTTCAAAGAATGCGTCCACTTTATCCACTCCTGCCGCCTCAACGGGGGTAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000037715.7 ENSMUST00000109811.4 ENSMUST00000123121.9 |
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| CDS CCA 72 bp | TGCACAAGGCAGTTACCCCCGTTGAGGCGGCAGGAGTaGATAAAGTGGACGCATTCTTTGAAGTGCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: CTRQLPPLRRQE*IKWTHSLKCFL Trigger: CAAAAAGCACTTCAAAGAATGCGTCCACTTTATCCACTCCTGCCGCCTCAACGGGGGTAACTGCCTTGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000037715.7 ENSMUST00000109811.4 ENSMUST00000123121.9 |
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| CDS CAA 90 bp | TTACCCCCGTTGAGGCGGCAGGAGTGGATAAAGTGGACGCATTCTTaGAAGTGCTTTTTGATGGGTACCTCAGGAGTATCAGACACTGAG | + |
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Preference number: 6 (lower is better) Translates to: LPPLRRQEWIKWTHS*KCFLMGTSGVSDTE Trigger: CTCAGTGTCTGATACTCCTGAGGTACCCATCAAAAAGCACTTCAAAGAATGCGTCCACTTTATCCACTCCTGCCGCCTCAACGGGGGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000037715.7 ENSMUST00000109811.4 ENSMUST00000123121.9 |
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| CDS GCA 72 bp | ATAGGCGATCACTATGGTGGTACTTCGAGATATACCTaGAAAGCAGTGCACAAGGCAGTTACCCCCGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: IGDHYGGTSRYT*KAVHKAVTPVE Trigger: CTCAACGGGGGTAACTGCCTTGTGCACTGCTTTGCAGGTATATCTCGAAGTACCACCATAGTGATCGCCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| CDS TCA 72 bp | ATAGAGATGATATGTGTGATCTTATTCCGGCCCAGCTaGTCCGGGTCTTTGGCATCTTGGTCATGCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: IEMICVILFRPS*SGSLASWSCHS Trigger: GGAATGGCATGACCAAGATGCCAAAGACCCGGATCAGCTGGGCCGGAATAAGATCACACATATCATCTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109811.4 |
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| CDS CCA 72 bp | GTCCAGTCACCGTCATCACATAGGCGATCACTATGGTaGTACTTCGAGATATACCTGCAAAGCAGTGCACAA | + |
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Preference number: 6 (lower is better) Translates to: VQSPSSHRRSLW*YFEIYLQSSAQ Trigger: TTGTGCACTGCTTTGCAGGTATATCTCGAAGTACCACCATAGTGATCGCCTATGTGATGACGGTGACTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123121.9 |
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| CDS TCA 72 bp | GTGCTTTTTGATGGGTACCTCAGGAGTATCAGACACTaGGATTCGAAGGTAGGTGATATCCTGCAACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VLFDGYLRSIRH*DSKVGDILQQR Trigger: CCTCTGTTGCAGGATATCACCTACCTTCGAATCTCAGTGTCTGATACTCCTGAGGTACCCATCAAAAAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037715.7 ENSMUST00000109811.4 ENSMUST00000123121.9 |
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| CDS CAA 72 bp | TTGAGGCGGCAGGAGTGGATAAAGTGGACGCATTCTTaGAAGTGCTTTTTGATGGGTACCTCAGGAGTATCA | + |
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Preference number: 6 (lower is better) Translates to: LRRQEWIKWTHS*KCFLMGTSGVS Trigger: TGATACTCCTGAGGTACCCATCAAAAAGCACTTCAAAGAATGCGTCCACTTTATCCACTCCTGCCGCCTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037715.7 ENSMUST00000109811.4 ENSMUST00000123121.9 |
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| CDS TCA 72 bp | ATAGAGATGATATGTGTGATCTTATTCCGGCCCAGCTaGTCCGGGTCTTTGGCATCAATGAAGTTTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: IEMICVILFRPS*SGSLASMKFPR Trigger: CCTTGGAAACTTCATTGATGCCAAAGACCCGGATCAGCTGGGCCGGAATAAGATCACACATATCATCTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037715.7 ENSMUST00000123121.9 |
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| CDS TCA 72 bp | TCGAAGGTAGGTGATATCCTGCAACAGAGGCTGGGGTaGTTCGTGGATAGAGATGATATGTGTGATCTTATT | + |
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Preference number: 6 (lower is better) Translates to: SKVGDILQQRLG*FVDRDDMCDLI Trigger: AATAAGATCACACATATCATCTCTATCCACGAATCACCCCAGCCTCTGTTGCAGGATATCACCTACCTTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037715.7 ENSMUST00000109811.4 ENSMUST00000123121.9 |
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| CDS CAA 72 bp | GAGTGGATAAAGTGGACGCATTCTTTGAAGTGCTTTTaGATGGGTACCTCAGGAGTATCAGACACTGAGATT | + |
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Preference number: 6 (lower is better) Translates to: EWIKWTHSLKCF*MGTSGVSDTEI Trigger: AATCTCAGTGTCTGATACTCCTGAGGTACCCATCAAAAAGCACTTCAAAGAATGCGTCCACTTTATCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037715.7 ENSMUST00000109811.4 ENSMUST00000123121.9 |
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