Pregenerated sensors for DUSP12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026659Ensembl transcript IDs: ENSMUST00000027970.14, ENSMUST00000046476.13, ENSMUST00000163252.8, ENSMUST00000166393.2, ENSMUST00000170420.8, ENSMUST00000171447.8
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGACGTATCGACTTCGTATCCCATTGCCTCATACAGTTTCAGTTaGCATTCAAACCCCTCATTCACTTTAGCCTCTGGCTTGACCGTC | + |
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Preference number: 1 (lower is better) Translates to: LDVSTSYPIASYSFS*HSNPSFTLASGLTV Trigger: GACGGTCAAGCCAGAGGCTAAAGTGAATGAGGGGTTTGAATGGCAACTGAAACTGTATGAGGCAATGGGATACGAAGTCGATACGTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166393.2 |
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| 3UTR CCA 90 bp | GTGCTTACAGCCAAAAAGGAAGACCCTAAGTTGGCCTTTGGCCAATaGAAGTGCAGGGACACACACCATACACACATACATGTGCACACA | + |
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Preference number: 1 (lower is better) Translates to: VLTAKKEDPKLAFGQ*KCRDTHHTHIHVHT Trigger: TGTGTGCACATGTATGTGTGTATGGTGTGTGTCCCTGCACTTCCATTGGCCAAAGGCCAACTTAGGGTCTTCCTTTTTGGCTGTAAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163252.8 |
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| 3UTR CAA 90 bp | CGACCACAGGAGCACTGTTCACCATACCAGTTAAAGGAACCCAACTaGGCACTGCATTTTGGGCAAAGAAGCTGTCCATCCATAACGCCC | + |
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Preference number: 2 (lower is better) Translates to: RPQEHCSPYQLKEPN*ALHFGQRSCPSITP Trigger: GGGCGTTATGGATGGACAGCTTCTTTGCCCAAAATGCAGTGCCAAGTTGGGTTCCTTTAACTGGTATGGTGAACAGTGCTCCTGTGGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 |
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| 3UTR-3UTR CCA 90 bp | GCGCCGTTCTCTTGTGAGCAAAGGCTATTGGCCCACTTCCTTCACTATGACCCAGTGAGCAAAGGCTATTaGCCCACTTCCTTCACTATG | + |
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Preference number: 2 (lower is better) Translates to: APFSCEQRLLAHFLHYDPVSKGY*PTSFTM Trigger: CATAGTGAAGGAAGTGGGCCAATAGCCTTTGCTCAC...TGGGTCATAGTGAAGGAAGTGGGCCAATAGCCTTTGCTCACAAGAGAACGGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| 3UTR CAA 90 bp | ACTGGACGTATCGACTTCGTATCCCATTGCCTCATACAGTTTCAGTaGCCATTCAAACCCCTCATTCACTTTAGCCTCTGGCTTGACCGT | + |
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Preference number: 2 (lower is better) Translates to: TGRIDFVSHCLIQFQ*PFKPLIHFSLWLDR Trigger: ACGGTCAAGCCAGAGGCTAAAGTGAATGAGGGGTTTGAATGGCAACTGAAACTGTATGAGGCAATGGGATACGAAGTCGATACGTCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166393.2 |
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| 3UTR CAA 90 bp | AAGGAGAAGTGCTTACAGCCAAAAAGGAAGACCCTAAGTTGGCCTTaGGCCAATGGAAGTGCAGGGACACACACCATACACACATACATG | + |
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Preference number: 2 (lower is better) Translates to: KEKCLQPKRKTLSWP*ANGSAGTHTIHTYM Trigger: CATGTATGTGTGTATGGTGTGTGTCCCTGCACTTCCATTGGCCAAAGGCCAACTTAGGGTCTTCCTTTTTGGCTGTAAGCACTTCTCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163252.8 |
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| 3UTR CAA 90 bp | ATGAAGAAAGGAGAAGTGCTTACAGCCAAAAAGGAAGACCCTAAGTaGGCCTTTGGCCAATGGAAGTGCAGGGACACACACCATACACAC | + |
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Preference number: 2 (lower is better) Translates to: MKKGEVLTAKKEDPK*AFGQWKCRDTHHTH Trigger: GTGTGTATGGTGTGTGTCCCTGCACTTCCATTGGCCAAAGGCCAACTTAGGGTCTTCCTTTTTGGCTGTAAGCACTTCTCCTTTCTTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163252.8 |
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| 3UTR-3UTR TCA 90 bp | CATCCACTGCACAGGCTCAATGAAGTAAGACGTGCACTGAGCCTGACTCCCTGTCCACTTCCTTCACTATaGCCCAAAATACTAGAATGT | + |
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Preference number: 2 (lower is better) Translates to: HPLHRLNEVRRALSLTPCPLPSL*PKILEC Trigger: ACATTCTAGTATTTTGGGTCATAGTGAAGGAAGTGG...ACAGGGAGTCAGGCTCAGTGCACGTCTTACTTCATTGAGCCTGTGCAGTGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| 3UTR-3UTR GCA 90 bp | CATCCACTGCACAGGCTCAATGAAGTAAGACGTGCACTGAGCCTGACTCCCTGTTCATACAGTTTCAGTTaGCATTCAAACCCCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: HPLHRLNEVRRALSLTPCSYSFS*HSNPSF Trigger: GAATGAGGGGTTTGAATGGCAACTGAAACTGTATGA...ACAGGGAGTCAGGCTCAGTGCACGTCTTACTTCATTGAGCCTGTGCAGTGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163252.8 ENSMUST00000166393.2 |
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| 3UTR-3UTR TCA 90 bp | GAACCCAACTTGGCACTGCATTTTGGGCAAAGAAGCTGTCCATCCATAACGCCCCCACTTCCTTCACTATaGCCCAAAATACTAGAATGT | + |
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Preference number: 2 (lower is better) Translates to: EPNLALHFGQRSCPSITPPLPSL*PKILEC Trigger: ACATTCTAGTATTTTGGGTCATAGTGAAGGAAGTGG...GGGCGTTATGGATGGACAGCTTCTTTGCCCAAAATGCAGTGCCAAGTTGGGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| 3UTR-3UTR CCA 90 bp | ATACCAGTTAAAGGAACCCAACTTGGCACTGCATTTTGGGCAAAGAAGCTGTCCGTGAGCAAAGGCTATTaGCCCACTTCCTTCACTATG | + |
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Preference number: 2 (lower is better) Translates to: IPVKGTQLGTAFWAKKLSVSKGY*PTSFTM Trigger: CATAGTGAAGGAAGTGGGCCAATAGCCTTTGCTCAC...GGACAGCTTCTTTGCCCAAAATGCAGTGCCAAGTTGGGTTCCTTTAACTGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGCACTGTTCACCATACCAGTTAAAGGAACCCAACTTGGCACTGCATTTTGTGAGCAAAGGCTATTaGCCCACTTCCTTCACTATG | + |
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Preference number: 2 (lower is better) Translates to: QEHCSPYQLKEPNLALHFVSKGY*PTSFTM Trigger: CATAGTGAAGGAAGTGGGCCAATAGCCTTTGCTCAC...AAAATGCAGTGCCAAGTTGGGTTCCTTTAACTGGTATGGTGAACAGTGCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGCATTTTGGGCAAAGAAGCTGTCCATCCATAACGCCCAACAGAGTAGATTCGTGAGCAAAGGCTATTaGCCCACTTCCTTCACTATG | + |
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Preference number: 2 (lower is better) Translates to: TAFWAKKLSIHNAQQSRFVSKGY*PTSFTM Trigger: CATAGTGAAGGAAGTGGGCCAATAGCCTTTGCTCAC...GAATCTACTCTGTTGGGCGTTATGGATGGACAGCTTCTTTGCCCAAAATGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| 3UTR-3UTR CCA 90 bp | GTTATCCATCGACCACAGGAGCACTGTTCACCATACCAGTTAAAGGAACCCAACAGGAAAAAGCATTACTaGGACTCCAGAGGACTCACT | + |
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Preference number: 2 (lower is better) Translates to: VIHRPQEHCSPYQLKEPNRKKHY*DSRGLT Trigger: AGTGAGTCCTCTGGAGTCCCAGTAATGCTTTTTCCT...GTTGGGTTCCTTTAACTGGTATGGTGAACAGTGCTCCTGTGGTCGATGGATAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163252.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGCAAAGAAGCTGTCCATCCATAACGCCCAACAGAGTAGATTCCATCCACTGCCACTTCCTTCACTATaGCCCAAAATACTAGAATGT | + |
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Preference number: 2 (lower is better) Translates to: WAKKLSIHNAQQSRFHPLPLPSL*PKILEC Trigger: ACATTCTAGTATTTTGGGTCATAGTGAAGGAAGTGG...CAGTGGATGGAATCTACTCTGTTGGGCGTTATGGATGGACAGCTTCTTTGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| 3UTR-3UTR TCA 90 bp | GAACCCAACTTGGCACTGCATTTTGGGCAAAGAAGCTGTCCATCCATAACGCCCTCGATTAAGAAGACATaGAGAAAGGAGAAGTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: EPNLALHFGQRSCPSITPSIKKT*RKEKCL Trigger: TAAGCACTTCTCCTTTCTTCATGTCTTCTTAATCGA...GGGCGTTATGGATGGACAGCTTCTTTGCCCAAAATGCAGTGCCAAGTTGGGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163252.8 |
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| 3UTR-3UTR GCA 90 bp | ACATCCACCATGAATGATGACAACGGGGAAGTGCCTTTCACAGGATCTAGCCCAACCGCCTGCATTTTCTaGATTTGTAGAGAATGTCAT | + |
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Preference number: 2 (lower is better) Translates to: TSTMNDDNGEVPFTGSSPTACIF*ICRECH Trigger: ATGACATTCTCTACAAATGCAGAAAATGCAGGCGGT...TGGGCTAGATCCTGTGAAAGGCACTTCCCCGTTGTCATCATTCATGGTGGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTTAAAGGAACCCAACTTGGCACTGCATTTTGGGCAAAGAAGCTGTCCATCCACAGCGAAGAGTTCCTaGGGTAAATTCCAAAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: QLKEPNLALHFGQRSCPSTAKSS*GKFQSF Trigger: AAAACTTTGGAATTTACCTCAGGAACTCTTCGCTGT...GGATGGACAGCTTCTTTGCCCAAAATGCAGTGCCAAGTTGGGTTCCTTTAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| 3UTR CAA 90 bp | ACTGGACGTATCGACTTCGTATCCCATTGCCTCATACAGTTTCAGTaGCCATTCAAACCCCTCATTCACTCTGCAATGATAAGCAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: TGRIDFVSHCLIQFQ*PFKPLIHSAMISKY Trigger: ATACTTGCTTATCATTGCAGAGTGAATGAGGGGTTTGAATGGCAACTGAAACTGTATGAGGCAATGGGATACGAAGTCGATACGTCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163252.8 |
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| 3UTR-3UTR GCA 90 bp | CCATACCAGTTAAAGGAACCCAACTTGGCACTGCATTTTGGGCAAAGAAGCTGTACCGCCTGCATTTTCTaGATTTGTAGAGAATGTCAT | + |
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Preference number: 2 (lower is better) Translates to: PYQLKEPNLALHFGQRSCTACIF*ICRECH Trigger: ATGACATTCTCTACAAATGCAGAAAATGCAGGCGGT...ACAGCTTCTTTGCCCAAAATGCAGTGCCAAGTTGGGTTCCTTTAACTGGTATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAACCCAACTTGGCACTGCATTTTGGGCAAAGAAGCTGTCCATCCATAACTCATACAGTTTCAGTTaGCATTCAAACCCCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: KGTQLGTAFWAKKLSIHNSYSFS*HSNPSF Trigger: GAATGAGGGGTTTGAATGGCAACTGAAACTGTATGA...GTTATGGATGGACAGCTTCTTTGCCCAAAATGCAGTGCCAAGTTGGGTTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163252.8 ENSMUST00000166393.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTCACCATACCAGTTAAAGGAACCCAACTTGGCACTGCATTTTGGGCAAAGACAGTATCTACTCACTTaGACACTTCTCAGTCACCTT | + |
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Preference number: 2 (lower is better) Translates to: CSPYQLKEPNLALHFGQRQYLLT*TLLSHL Trigger: AAGGTGACTGAGAAGTGTCCAAGTGAGTAGATACTG...TCTTTGCCCAAAATGCAGTGCCAAGTTGGGTTCCTTTAACTGGTATGGTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163252.8 |
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| 3UTR-3UTR GCA 90 bp | TTCACAGCTTCTTTGTCTGTGATCCCAGCACCGGCAACATTTTCATTTCATCCAACCGCCTGCATTTTCTaGATTTGTAGAGAATGTCAT | + |
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Preference number: 2 (lower is better) Translates to: FTASLSVIPAPATFSFHPTACIF*ICRECH Trigger: ATGACATTCTCTACAAATGCAGAAAATGCAGGCGGT...TGGATGAAATGAAAATGTTGCCGGTGCTGGGATCACAGACAAAGAAGCTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 |
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| 3UTR-3UTR TCA 90 bp | AACATACAACACAGCATAGCTTTCAAAACCATAAGAAGCTCTAGATTCAGCTCAACAGCGAAGAGTTCCTaGGGTAAATTCCAAAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: NIQHSIAFKTIRSSRFSSTAKSS*GKFQSF Trigger: AAAACTTTGGAATTTACCTCAGGAACTCTTCGCTGT...TGAGCTGAATCTAGAGCTTCTTATGGTTTTGAAAGCTATGCTGTGTTGTATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170420.8 |
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| 3UTR-3UTR CAA 90 bp | CATCCACTGCACAGGCTCAATGAAGTAAGACGTGCACTGAGCCTGACTCCCTGTTGTGAGCAAAGGCTATaGGCCCACTTCCTTCACTAT | + |
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Preference number: 3 (lower is better) Translates to: HPLHRLNEVRRALSLTPCCEQRL*AHFLHY Trigger: ATAGTGAAGGAAGTGGGCCAATAGCCTTTGCTCACA...ACAGGGAGTCAGGCTCAGTGCACGTCTTACTTCATTGAGCCTGTGCAGTGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| 3UTR-3UTR CAA 90 bp | CGACCACAGGAGCACTGTTCACCATACCAGTTAAAGGAACCCAACTTGGCACTGACTTGGCACTGCATTTaGGGCAAAGAAGCTGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: RPQEHCSPYQLKEPNLALTWHCI*GKEAVH Trigger: ATGGACAGCTTCTTTGCCCAAAATGCAGTGCCAAGT...CAGTGCCAAGTTGGGTTCCTTTAACTGGTATGGTGAACAGTGCTCCTGTGGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGGTTATCCATCGACCACAGGAGCACTGTTCACCATACCAGTTAAAGGAACCCCAGTATCTACTCACTaGGACACTTCTCAGTCACCT | + |
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Preference number: 3 (lower is better) Translates to: RGYPSTTGALFTIPVKGTPVSTH*DTSQSP Trigger: AGGTGACTGAGAAGTGTCCAAGTGAGTAGATACTGG...GGTTCCTTTAACTGGTATGGTGAACAGTGCTCCTGTGGTCGATGGATAACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163252.8 |
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| 3UTR TCA 72 bp | CCAAGCTGGGTCCTAAGTTCACAGCTTCTTTGTCTGTaGTCCCAGCACCGGCAACATTTTCATTTCATCCAC | + |
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Preference number: 3 (lower is better) Translates to: PSWVLSSQLLCL*SQHRQHFHFIH Trigger: GTGGATGAAATGAAAATGTTGCCGGTGCTGGGATCACAGACAAAGAAGCTGTGAACTTAGGACCCAGCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 ENSMUST00000171447.8 |
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| 3UTR-3UTR CAA 90 bp | ATACCAGTTAAAGGAACCCAACTTGGCACTGCATTTTGGGCAAAGAAGCTGTCCTGTGAGCAAAGGCTATaGGCCCACTTCCTTCACTAT | + |
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Preference number: 3 (lower is better) Translates to: IPVKGTQLGTAFWAKKLSCEQRL*AHFLHY Trigger: ATAGTGAAGGAAGTGGGCCAATAGCCTTTGCTCACA...GGACAGCTTCTTTGCCCAAAATGCAGTGCCAAGTTGGGTTCCTTTAACTGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTGGGCAAAGAAGCTGTCCATCCATAACGCCCAACAGAGTAGATTCCATCCATGTGAGCAAAGGCTATaGGCCCACTTCCTTCACTAT | + |
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Preference number: 3 (lower is better) Translates to: FWAKKLSIHNAQQSRFHPCEQRL*AHFLHY Trigger: ATAGTGAAGGAAGTGGGCCAATAGCCTTTGCTCACA...TGGATGGAATCTACTCTGTTGGGCGTTATGGATGGACAGCTTCTTTGCCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| 3UTR-3UTR CAA 90 bp | GTTATCCATCGACCACAGGAGCACTGTTCACCATACCAGTTAAAGGAACCCAACCGACTTCGTATCCCATaGCCTCATACAGTTTCAGTT | + |
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Preference number: 3 (lower is better) Translates to: VIHRPQEHCSPYQLKEPNRLRIP*PHTVSV Trigger: AACTGAAACTGTATGAGGCAATGGGATACGAAGTCG...GTTGGGTTCCTTTAACTGGTATGGTGAACAGTGCTCCTGTGGTCGATGGATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163252.8 |
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| 3UTR GCA 72 bp | TCGACTTCGTATCCCATTGCCTCATACAGTTTCAGTTaGCATTCAAACCCCTCATTCACTTTAGCCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: STSYPIASYSFS*HSNPSFTLASG Trigger: GCCAGAGGCTAAAGTGAATGAGGGGTTTGAATGGCAACTGAAACTGTATGAGGCAATGGGATACGAAGTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166393.2 |
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| 3UTR CCA 72 bp | ATACCAGTTAAAGGAACCCAACTTGGCACTGCATTTTaGGCAAAGAAGCTGTCCATCCATAACGCCCAACAG | + |
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Preference number: 3 (lower is better) Translates to: IPVKGTQLGTAF*AKKLSIHNAQQ Trigger: CTGTTGGGCGTTATGGATGGACAGCTTCTTTGCCCAAAATGCAGTGCCAAGTTGGGTTCCTTTAACTGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| 3UTR-3UTR CAA 90 bp | CAAAGAAGCTGTCCATCCATAACGCCCAACAGAGTAGATTCCATCCACTGCACACTCATACAGTTTCAGTaGCCATTCAAACCCCTCATT | + |
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Preference number: 3 (lower is better) Translates to: QRSCPSITPNRVDSIHCTLIQFQ*PFKPLI Trigger: AATGAGGGGTTTGAATGGCAACTGAAACTGTATGAG...TGTGCAGTGGATGGAATCTACTCTGTTGGGCGTTATGGATGGACAGCTTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163252.8 ENSMUST00000166393.2 |
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| 3UTR-3UTR CAA 90 bp | CACTGTTCACCATACCAGTTAAAGGAACCCAACTTGGCACTGCATTTTGGGCAACATTCCAAAAGAAGTTaGACATCCACCATGAATGAT | + |
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Preference number: 3 (lower is better) Translates to: HCSPYQLKEPNLALHFGQHSKRS*TSTMND Trigger: ATCATTCATGGTGGATGTCAAACTTCTTTTGGAATG...TTGCCCAAAATGCAGTGCCAAGTTGGGTTCCTTTAACTGGTATGGTGAACAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 |
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| 3UTR CCA 72 bp | TACCAACCCACAGCTGTTACAGTCAGTAACTGTCTTTaGACATTCCAAAAGAAGTTTGACATCCACCATGAA | + |
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Preference number: 3 (lower is better) Translates to: YQPTAVTVSNCL*TFQKKFDIHHE Trigger: TTCATGGTGGATGTCAAACTTCTTTTGGAATGTCCAAAGACAGTTACTGACTGTAACAGCTGTGGGTTGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 ENSMUST00000171447.8 |
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| 3UTR TCA 72 bp | TCAGAGGTAGAATGCTTGCCTAACATGCTTAAAGCTTaGGCTAGATCAAACAGCATAAAAGCTTTAAACCAT | + |
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Preference number: 3 (lower is better) Translates to: SEVECLPNMLKA*ARSNSIKALNH Trigger: ATGGTTTAAAGCTTTTATGCTGTTTGATCTAGCTCAAGCTTTAAGCATGTTAGGCAAGCATTCTACCTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170420.8 |
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| CDS-3UTR TCA 90 bp | GACAACGGGGAAGTGCCTTTCACAGGATCTAGCCCAAGCTGGGTCCTAAGTTCACCGTCAGCACGGCGGTaGTGCCCGCCTCCCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: DNGEVPFTGSSPSWVLSSPSARR*CPPPSD Trigger: ATCTGAGGGAGGCGGGCATCACCGCCGTGCTGACGG...TGAACTTAGGACCCAGCTTGGGCTAGATCCTGTGAAAGGCACTTCCCCGTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 |
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| CDS-3UTR TCA 90 bp | CTGCTCAACAAAAGGAACCACAAGTCTCTGCCTCCTAGGAATTCTTGGAAAGTGCCGTCAGCACGGCGGTaGTGCCCGCCTCCCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: LLNKRNHKSLPPRNSWKVPSARR*CPPPSD Trigger: ATCTGAGGGAGGCGGGCATCACCGCCGTGCTGACGG...CACTTTCCAAGAATTCCTAGGAGGCAGAGACTTGTGGTTCCTTTTGTTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163252.8 |
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| CDS-3UTR TCA 90 bp | AATGATGACAACGGGGAAGTGCCTTTCACAGGATCTAGCCCAAGCTGGGTCCTACGACTGACTCCTGCATaGCAGTGCACCAACACCGCG | + |
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Preference number: 4 (lower is better) Translates to: NDDNGEVPFTGSSPSWVLRLTPA*QCTNTA Trigger: CGCGGTGTTGGTGCACTGTCATGCAGGAGTCAGTCG...TAGGACCCAGCTTGGGCTAGATCCTGTGAAAGGCACTTCCCCGTTGTCATCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000171447.8 |
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| CDS-3UTR TCA 90 bp | GACGTATCGACTTCGTATCCCATTGCCTCATACAGTTTCAGTTGCCATTCAAACCCGTCAGCACGGCGGTaGTGCCCGCCTCCCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: DVSTSYPIASYSFSCHSNPSARR*CPPPSD Trigger: ATCTGAGGGAGGCGGGCATCACCGCCGTGCTGACGG...GTTTGAATGGCAACTGAAACTGTATGAGGCAATGGGATACGAAGTCGATACGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163252.8 ENSMUST00000166393.2 |
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| CDS-3UTR TCA 90 bp | AATGATGACAACGGGGAAGTGCCTTTCACAGGATCTAGCCCAAGCTGGGTCCTAGGCGCCGTTCTCTTGTaGGCAAAGGCTATTGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NDDNGEVPFTGSSPSWVLGAVLL*AKAIGP Trigger: TGGGCCAATAGCCTTTGCTCACAAGAGAACGGCGCC...TAGGACCCAGCTTGGGCTAGATCCTGTGAAAGGCACTTCCCCGTTGTCATCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027970.14 |
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| CDS-3UTR CCA 90 bp | ACAGCTTCTTTGTCTGTGATCCCAGCACCGGCAACATTTTCATTTCATCCACTCCCTTCGGAGCGAGCCTaGCCGATGAAGGCCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TASLSVIPAPATFSFHPLPSERA*PMKATQ Trigger: CTGCGTGGCCTTCATCGGCCAGGCTCGCTCCGAAGG...GAGTGGATGAAATGAAAATGTTGCCGGTGCTGGGATCACAGACAAAGAAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 ENSMUST00000171447.8 |
||
| CDS-3UTR CCA 90 bp | CCATACCAGTTAAAGGAACCCAACTTGGCACTGCATTTTGGGCAAAGAAGCTGTCCTTCGGAGCGAGCCTaGCCGATGAAGGCCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PYQLKEPNLALHFGQRSCPSERA*PMKATQ Trigger: CTGCGTGGCCTTCATCGGCCAGGCTCGCTCCGAAGG...ACAGCTTCTTTGCCCAAAATGCAGTGCCAAGTTGGGTTCCTTTAACTGGTATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGCACTGTTCACCATACCAGTTAAAGGAACCCAACTTGGCACTGCATTTTCCTTCGGAGCGAGCCTaGCCGATGAAGGCCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QEHCSPYQLKEPNLALHFPSERA*PMKATQ Trigger: CTGCGTGGCCTTCATCGGCCAGGCTCGCTCCGAAGG...AAAATGCAGTGCCAAGTTGGGTTCCTTTAACTGGTATGGTGAACAGTGCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 |
||
| CDS-3UTR CCA 90 bp | TGCCACATAATAAGCTACCAACCCACAGCTGTTACAGTCAGTAACTGTCTTTGGCCTTCGGAGCGAGCCTaGCCGATGAAGGCCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CHIISYQPTAVTVSNCLWPSERA*PMKATQ Trigger: CTGCGTGGCCTTCATCGGCCAGGCTCGCTCCGAAGG...CCAAAGACAGTTACTGACTGTAACAGCTGTGGGTTGGTAGCTTATTATGTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 ENSMUST00000171447.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTGTGAGCAAAGGCTATTGGCCCACTTCCTTCACTATGACCCAAAATACTCCTTCGGAGCGAGCCTaGCCGATGAAGGCCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLVSKGYWPTSFTMTQNTPSERA*PMKATQ Trigger: CTGCGTGGCCTTCATCGGCCAGGCTCGCTCCGAAGG...AGTATTTTGGGTCATAGTGAAGGAAGTGGGCCAATAGCCTTTGCTCACAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCATTTTGGGCAAAGAAGCTGTCCATCCATAACGCCCAACAGAGTAGATTCCGACTGACTCCTGCATaGCAGTGCACCAACACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TAFWAKKLSIHNAQQSRFRLTPA*QCTNTA Trigger: CGCGGTGTTGGTGCACTGTCATGCAGGAGTCAGTCG...GAATCTACTCTGTTGGGCGTTATGGATGGACAGCTTCTTTGCCCAAAATGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046476.13 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAACTGTCTTTGGACATTCCAAAAGAAGTTTGACATCCACCATGAATCCGTCAGCACGGCGGTaGTGCCCGCCTCCCTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSVTVFGHSKRSLTSTMNPSARR*CPPPSD Trigger: ATCTGAGGGAGGCGGGCATCACCGCCGTGCTGACGG...ATTCATGGTGGATGTCAAACTTCTTTTGGAATGTCCAAAGACAGTTACTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 |
||
| CDS-3UTR TCA 90 bp | AACGTAACTGTATATATGCCACATAATAAGCTACCAACCCACAGCTGTTACAGTCCGTCAGCACGGCGGTaGTGCCCGCCTCCCTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NVTVYMPHNKLPTHSCYSPSARR*CPPPSD Trigger: ATCTGAGGGAGGCGGGCATCACCGCCGTGCTGACGG...ACTGTAACAGCTGTGGGTTGGTAGCTTATTATGTGGCATATATACAGTTACGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000170420.8 |
||
| CDS-3UTR TCA 90 bp | TTGCCATTCAAACCCCTCATTCACTTTAGCCTCTGGCTTGACCGTCCGGAGGATCGACTGACTCCTGCATaGCTGAAAAAGAGACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPFKPLIHFSLWLDRPEDRLTPA*LKKRPV Trigger: CACTGGTCTCTTTTTCAGTCATGCAGGAGTCAGTCG...ATCCTCCGGACGGTCAAGCCAGAGGCTAAAGTGAATGAGGGGTTTGAATGGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166393.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTTATCCATCGACCACAGGAGCACTGTTCACCATACCAGTTAAAGGAACCCCGACTGACTCCTGCATaGCTGAAAAAGAGACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVIHRPQEHCSPYQLKEPRLTPA*LKKRPV Trigger: CACTGGTCTCTTTTTCAGTCATGCAGGAGTCAGTCG...GGGTTCCTTTAACTGGTATGGTGAACAGTGCTCCTGTGGTCGATGGATAACCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000163252.8 ENSMUST00000170420.8 |
||
| CDS-3UTR TCA 90 bp | AGGGGTTATCCATCGACCACAGGAGCACTGTTCACCATACCAGTTAAAGGAACCCGACTGACTCCTGCATaGCTGAAAAAGAGACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGYPSTTGALFTIPVKGTRLTPA*LKKRPV Trigger: CACTGGTCTCTTTTTCAGTCATGCAGGAGTCAGTCG...GGTTCCTTTAACTGGTATGGTGAACAGTGCTCCTGTGGTCGATGGATAACCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163252.8 ENSMUST00000170420.8 |
||
| CDS-3UTR CCA 90 bp | AATGATGACAACGGGGAAGTGCCTTTCACAGGATCTAGCCCAAGCTGGGTCCTACTTGGCACTGCATTTTaGGCAAAGAAGCTGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: NDDNGEVPFTGSSPSWVLLGTAF*AKKLSI Trigger: GATGGACAGCTTCTTTGCCCAAAATGCAGTGCCAAG...TAGGACCCAGCTTGGGCTAGATCCTGTGAAAGGCACTTCCCCGTTGTCATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027970.14 |
||
| 3UTR CAA 72 bp | TGCTTACAGCCAAAAAGGAAGACCCTAAGTTGGCCTTaGGCCAATGGAAGTGCAGGGACACACACCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: CLQPKRKTLSWP*ANGSAGTHTIH Trigger: GTGTATGGTGTGTGTCCCTGCACTTCCATTGGCCAAAGGCCAACTTAGGGTCTTCCTTTTTGGCTGTAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163252.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGGCGCCGTTCTCTTGTGAGCAAAGGCTATTGGCCCACTTCCTTCACTATACTGCGACTGACTCCTaGATGACTGAAAAAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: KMAPFSCEQRLLAHFLHYTATDS*MTEKET Trigger: GGTCTCTTTTTCAGTCATGCAGGAGTCAGTCGCAGT...ATAGTGAAGGAAGTGGGCCAATAGCCTTTGCTCACAAGAGAACGGCGCCATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGTAACTGTCTTTGGACATTCCAAAAGAAGTTTGACATCCACCATGAATCGACTGACTCCTGCATaGCAGTGCACCAACACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSVTVFGHSKRSLTSTMNRLTPA*QCTNTA Trigger: CGCGGTGTTGGTGCACTGTCATGCAGGAGTCAGTCG...ATTCATGGTGGATGTCAAACTTCTTTTGGAATGTCCAAAGACAGTTACTGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000171447.8 |
||
| CDS-3UTR TCA 90 bp | ACCATGAATGATGACAACGGGGAAGTGCCTTTCACAGGATCTAGCCCAAGCTGGACAGCGAAGAGTTCCTaGGGTAAATTCCAAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TMNDDNGEVPFTGSSPSWTAKSS*GKFQSF Trigger: AAAACTTTGGAATTTACCTCAGGAACTCTTCGCTGT...CCAGCTTGGGCTAGATCCTGTGAAAGGCACTTCCCCGTTGTCATCATTCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000171447.8 |
||
| CDS-3UTR GCA 90 bp | GTAACTGTATATATGCCACATAATAAGCTACCAACCCACAGCTGTTACAGTCAGACTGCGACTGACTCCTaGATGACAGTGCACCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VTVYMPHNKLPTHSCYSQTATDS*MTVHQH Trigger: GTGTTGGTGCACTGTCATGCAGGAGTCAGTCGCAGT...CTGACTGTAACAGCTGTGGGTTGGTAGCTTATTATGTGGCATATATACAGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000171447.8 |
||
| CDS-3UTR GCA 90 bp | TTCACAGCTTCTTTGTCTGTGATCCCAGCACCGGCAACATTTTCATTTCATCCAACTGCGACTGACTCCTaGATGACTGAAAAAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: FTASLSVIPAPATFSFHPTATDS*MTEKET Trigger: GGTCTCTTTTTCAGTCATGCAGGAGTCAGTCGCAGT...TGGATGAAATGAAAATGTTGCCGGTGCTGGGATCACAGACAAAGAAGCTGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163252.8 ENSMUST00000170420.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCACCATACCAGTTAAAGGAACCCAACTTGGCACTGCATTTTGGGCAAAGAACTGCGACTGACTCCTaGATGACTGAAAAAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: CSPYQLKEPNLALHFGQRTATDS*MTEKET Trigger: GGTCTCTTTTTCAGTCATGCAGGAGTCAGTCGCAGT...TCTTTGCCCAAAATGCAGTGCCAAGTTGGGTTCCTTTAACTGGTATGGTGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163252.8 ENSMUST00000170420.8 |
||
| 3UTR CAA 72 bp | ATCGACTTCGTATCCCATTGCCTCATACAGTTTCAGTaGCCATTCAAACCCCTCATTCACTTTAGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IDFVSHCLIQFQ*PFKPLIHFSLW Trigger: CCAGAGGCTAAAGTGAATGAGGGGTTTGAATGGCAACTGAAACTGTATGAGGCAATGGGATACGAAGTCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166393.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTATTTGAAAAGCAGGGGTTATCCATCGACCACAGGAGCACTGTTCACCACAGCGAAGAGTTCCTaGGGTAAATTCCAAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVYLKSRGYPSTTGALFTTAKSS*GKFQSF Trigger: AAAACTTTGGAATTTACCTCAGGAACTCTTCGCTGT...GGTGAACAGTGCTCCTGTGGTCGATGGATAACCCCTGCTTTTCAAATACACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046476.13 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTAACTGTCTTTGGACATTCCAAAAGAAGTTTGACATCCACCATGAATACTGCGACTGACTCCTaGATGACAGTGCACCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: QSVTVFGHSKRSLTSTMNTATDS*MTVHQH Trigger: GTGTTGGTGCACTGTCATGCAGGAGTCAGTCGCAGT...ATTCATGGTGGATGTCAAACTTCTTTTGGAATGTCCAAAGACAGTTACTGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000171447.8 |
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| CDS-3UTR GCA 90 bp | TTACAGTCAGTAACTGTCTTTGGACATTCCAAAAGAAGTTTGACATCCACCATGACTGCGACTGACTCCTaGATGACAGTGCACCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSVTVFGHSKRSLTSTMTATDS*MTVHQH Trigger: GTGTTGGTGCACTGTCATGCAGGAGTCAGTCGCAGT...CATGGTGGATGTCAAACTTCTTTTGGAATGTCCAAAGACAGTTACTGACTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000171447.8 |
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| CDS-3UTR GCA 90 bp | ACATCCACCATGAATGATGACAACGGGGAAGTGCCTTTCACAGGATCTAGCCCAAGAAGCTGCATTTTCTaGATTTGTAGAGAATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSTMNDDNGEVPFTGSSPRSCIF*ICRECH Trigger: ATGACATTCTCTACAAATGCAGAAAATGCAGCTTCT...TGGGCTAGATCCTGTGAAAGGCACTTCCCCGTTGTCATCATTCATGGTGGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171447.8 |
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| 3UTR CAA 72 bp | ATCGACTTCGTATCCCATTGCCTCATACAGTTTCAGTaGCCATTCAAACCCCTCATTCACTCTGCAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: IDFVSHCLIQFQ*PFKPLIHSAMI Trigger: TATCATTGCAGAGTGAATGAGGGGTTTGAATGGCAACTGAAACTGTATGAGGCAATGGGATACGAAGTCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163252.8 |
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| CDS-3UTR TCA 90 bp | TGCCACATAATAAGCTACCAACCCACAGCTGTTACAGTCAGTAACTGTCTTTGGCCACTTCCTTCACTATaGCCCAAAATACTAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: CHIISYQPTAVTVSNCLWPLPSL*PKILEC Trigger: ACATTCTAGTATTTTGGGTCATAGTGAAGGAAGTGG...CCAAAGACAGTTACTGACTGTAACAGCTGTGGGTTGGTAGCTTATTATGTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027970.14 |
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| CDS-3UTR GCA 90 bp | CAGCTGTTACAGTCAGTAACTGTCTTTGGACATTCCAAAAGAAGTTTGACATCCAACCCAACTTGGCACTaGATTTTGGGCAAAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLQSVTVFGHSKRSLTSNPTWH*ILGKEA Trigger: AGCTTCTTTGCCCAAAATGCAGTGCCAAGTTGGGTT...GGATGTCAAACTTCTTTTGGAATGTCCAAAGACAGTTACTGACTGTAACAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027970.14 ENSMUST00000171447.8 |
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| CDS-3UTR GCA 90 bp | CCAAGCAACGTAACTGTATATATGCCACATAATAAGCTACCAACCCACAGCTGTTCATACAGTTTCAGTTaGCATTCAAACCCCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PSNVTVYMPHNKLPTHSCSYSFS*HSNPSF Trigger: GAATGAGGGGTTTGAATGGCAACTGAAACTGTATGA...ACAGCTGTGGGTTGGTAGCTTATTATGTGGCATATATACAGTTACGTTGCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027970.14 ENSMUST00000171447.8 |
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| CDS-3UTR GCA 90 bp | CCAAGCAACGTAACTGTATATATGCCACATAATAAGCTACCAACCCACAGCTGTACCGCCTGCATTTTCTaGATTTGTAGAGAATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSNVTVYMPHNKLPTHSCTACIF*ICRECH Trigger: ATGACATTCTCTACAAATGCAGAAAATGCAGGCGGT...ACAGCTGTGGGTTGGTAGCTTATTATGTGGCATATATACAGTTACGTTGCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027970.14 |
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| CDS-3UTR GCA 90 bp | ACAGTCAGTAACTGTCTTTGGACATTCCAAAAGAAGTTTGACATCCACCATGAAAACCCAACTTGGCACTaGATTTTGGGCAAAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSNCLWTFQKKFDIHHENPTWH*ILGKEA Trigger: AGCTTCTTTGCCCAAAATGCAGTGCCAAGTTGGGTT...TTCATGGTGGATGTCAAACTTCTTTTGGAATGTCCAAAGACAGTTACTGACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027970.14 ENSMUST00000171447.8 |
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| CDS-3UTR CCA 90 bp | TCAGTAACTGTCTTTGGACATTCCAAAAGAAGTTTGACATCCACCATGAATGATGTGAGCAAAGGCTATTaGCCCACTTCCTTCACTATG | + |
|
Preference number: 4 (lower is better) Translates to: SVTVFGHSKRSLTSTMNDVSKGY*PTSFTM Trigger: CATAGTGAAGGAAGTGGGCCAATAGCCTTTGCTCAC...ATCATTCATGGTGGATGTCAAACTTCTTTTGGAATGTCCAAAGACAGTTACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027970.14 |
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| CDS-3UTR GCA 90 bp | AAGTTCACAGCTTCTTTGTCTGTGATCCCAGCACCGGCAACATTTTCATTTCATTTTGGGCAAAGAAGCTaGATTTTCTGCATTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KFTASLSVIPAPATFSFHFGQRS*IFCICR Trigger: TCTACAAATGCAGAAAATGCAGCTTCTTTGCCCAAA...ATGAAATGAAAATGTTGCCGGTGCTGGGATCACAGACAAAGAAGCTGTGAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171447.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTCAGTAACTGTCTTTGGACATTCCAAAAGAAGTTTGACATCCACCATGAAACAGCGAAGAGTTCCTaGGGTAAATTCCAAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVSNCLWTFQKKFDIHHETAKSS*GKFQSF Trigger: AAAACTTTGGAATTTACCTCAGGAACTCTTCGCTGT...TTCATGGTGGATGTCAAACTTCTTTTGGAATGTCCAAAGACAGTTACTGACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000171447.8 |
||
| CDS-3UTR GCA 90 bp | TTACAGTCAGTAACTGTCTTTGGACATTCCAAAAGAAGTTTGACATCCACCATGTCATACAGTTTCAGTTaGCATTCAAACCCCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LQSVTVFGHSKRSLTSTMSYSFS*HSNPSF Trigger: GAATGAGGGGTTTGAATGGCAACTGAAACTGTATGA...CATGGTGGATGTCAAACTTCTTTTGGAATGTCCAAAGACAGTTACTGACTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027970.14 ENSMUST00000171447.8 |
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| CDS GCA 90 bp | GGTGATGCCCGCCTCCCTCAGATGGCCCGGTTCCGCCACTGCCGCTaGCCCACCCAGATACAGCCCGGGCCGCACTTCCACGGCGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GDARLPQMARFRHCR*PTQIQPGPHFHGVP Trigger: GGGCACGCCGTGGAAGTGCGGCCCGGGCTGTATCTGGGTGGGGCAGCGGCAGTGGCGGAACCGGGCCATCTGAGGGAGGCGGGCATCACC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
||
| CDS GCA 90 bp | CACGGCGGTGATGCCCGCCTCCCTCAGATGGCCCGGTTCCGCCACTaGCGCTGCCCCACCCAGATACAGCCCGGGCCGCACTTCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: HGGDARLPQMARFRH*RCPTQIQPGPHFHG Trigger: GCCGTGGAAGTGCGGCCCGGGCTGTATCTGGGTGGGGCAGCGGCAGTGGCGGAACCGGGCCATCTGAGGGAGGCGGGCATCACCGCCGTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
||
| CDS CCA 90 bp | TCAGAGTCCACCGTCAGCACGGCGGTGATGCCCGCCTCCCTCAGATaGCCCGGTTCCGCCACTGCCGCTGCCCCACCCAGATACAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SESTVSTAVMPASLR*PGSATAAAPPRYSP Trigger: CGGGCTGTATCTGGGTGGGGCAGCGGCAGTGGCGGAACCGGGCCATCTGAGGGAGGCGGGCATCACCGCCGTGCTGACGGTGGACTCTGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
||
| CDS CCA 90 bp | CCTTCGGAGCGAGCCTGGCCGATGAAGGCCACGCAGCGATCCAGGTaGCTGAGCAGGTCGGTCTCGGGTTTGTCCAGCGCCGGCACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSERAWPMKATQRSR*LSRSVSGLSSAGTK Trigger: CTTCGTGCCGGCGCTGGACAAACCCGAGACCGACCTGCTCAGCCACCTGGATCGCTGCGTGGCCTTCATCGGCCAGGCTCGCTCCGAAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 ENSMUST00000171447.8 |
||
| CDS CCA 90 bp | AAAAGAGACCAGTGCACCAACACCGCGCGGCCTTCGGAGCGAGCCTaGCCGATGAAGGCCACGCAGCGATCCAGGTGGCTGAGCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KRDQCTNTARPSERA*PMKATQRSRWLSRS Trigger: CGACCTGCTCAGCCACCTGGATCGCTGCGTGGCCTTCATCGGCCAGGCTCGCTCCGAAGGCCGCGCGGTGTTGGTGCACTGGTCTCTTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
||
| CDS GCA 90 bp | CTTCATTATAAAAGCCATCACTACAGCAACACTGCGACTGACTCCTaGATGACTGAAAAAGAGACCAGTGCACCAACACCGCGCGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LHYKSHHYSNTATDS*MTEKETSAPTPRGL Trigger: AAGGCCGCGCGGTGTTGGTGCACTGGTCTCTTTTTCAGTCATGCAGGAGTCAGTCGCAGTGTTGCTGTAGTGATGGCTTTTATAATGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
||
| CDS-3UTR CAA 90 bp | GACAACGGGGAAGTGCCTTTCACAGGATCTAGCCCAAGCTGGGTCCTAAGTTCAACTTGGCACTGCATTTaGGGCAAAGAAGCTGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: DNGEVPFTGSSPSWVLSSTWHCI*GKEAAF Trigger: AAATGCAGCTTCTTTGCCCAAAATGCAGTGCCAAGT...TGAACTTAGGACCCAGCTTGGGCTAGATCCTGTGAAAGGCACTTCCCCGTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171447.8 |
||
| CDS-3UTR CAA 90 bp | ACATCCACCATGAATGATGACAACGGGGAAGTGCCTTTCACAGGATCTAGCCCACGACTTCGTATCCCATaGCCTCATACAGTTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TSTMNDDNGEVPFTGSSPRLRIP*PHTVSV Trigger: AACTGAAACTGTATGAGGCAATGGGATACGAAGTCG...TGGGCTAGATCCTGTGAAAGGCACTTCCCCGTTGTCATCATTCATGGTGGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027970.14 ENSMUST00000171447.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTCACAGGATCTAGCCCAAGCTGGGTCCTAAGTTCACAGCTTCTTTGTCTGCGACTTCGTATCCCATaGCCTCATACAGTTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PFTGSSPSWVLSSQLLCLRLRIP*PHTVSV Trigger: AACTGAAACTGTATGAGGCAATGGGATACGAAGTCG...CAGACAAAGAAGCTGTGAACTTAGGACCCAGCTTGGGCTAGATCCTGTGAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171447.8 |
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| CDS-3UTR CAA 90 bp | AGCAACGTAACTGTATATATGCCACATAATAAGCTACCAACCCACAGCTGTTACTGTGAGCAAAGGCTATaGGCCCACTTCCTTCACTAT | + |
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Preference number: 5 (lower is better) Translates to: SNVTVYMPHNKLPTHSCYCEQRL*AHFLHY Trigger: ATAGTGAAGGAAGTGGGCCAATAGCCTTTGCTCACA...GTAACAGCTGTGGGTTGGTAGCTTATTATGTGGCATATATACAGTTACGTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027970.14 |
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| CDS-3UTR CAA 90 bp | ATATGCCACATAATAAGCTACCAACCCACAGCTGTTACAGTCAGTAACTGTCTTACTTGGCACTGCATTTaGGGCAAAGAAGCTGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: ICHIISYQPTAVTVSNCLTWHCI*GKEAVH Trigger: ATGGACAGCTTCTTTGCCCAAAATGCAGTGCCAAGT...AAGACAGTTACTGACTGTAACAGCTGTGGGTTGGTAGCTTATTATGTGGCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027970.14 |
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| CDS-3UTR CAA 90 bp | TGCCACATAATAAGCTACCAACCCACAGCTGTTACAGTCAGTAACTGTCTTTGGTCTGTTCTTGTGTATTaGAAAAGCAGGGGTTATCCA | + |
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Preference number: 5 (lower is better) Translates to: CHIISYQPTAVTVSNCLWSVLVY*KSRGYP Trigger: TGGATAACCCCTGCTTTTCAAATACACAAGAACAGA...CCAAAGACAGTTACTGACTGTAACAGCTGTGGGTTGGTAGCTTATTATGTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027970.14 |
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| CDS-3UTR CAA 90 bp | AGCAACGTAACTGTATATATGCCACATAATAAGCTACCAACCCACAGCTGTTACCTCATACAGTTTCAGTaGCCATTCAAACCCCTCATT | + |
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Preference number: 5 (lower is better) Translates to: SNVTVYMPHNKLPTHSCYLIQFQ*PFKPLI Trigger: AATGAGGGGTTTGAATGGCAACTGAAACTGTATGAG...GTAACAGCTGTGGGTTGGTAGCTTATTATGTGGCATATATACAGTTACGTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027970.14 ENSMUST00000171447.8 |
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| CDS-3UTR CAA 90 bp | TCAGTAACTGTCTTTGGACATTCCAAAAGAAGTTTGACATCCACCATGAATGATCTCATACAGTTTCAGTaGCCATTCAAACCCCTCATT | + |
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Preference number: 5 (lower is better) Translates to: SVTVFGHSKRSLTSTMNDLIQFQ*PFKPLI Trigger: AATGAGGGGTTTGAATGGCAACTGAAACTGTATGAG...ATCATTCATGGTGGATGTCAAACTTCTTTTGGAATGTCCAAAGACAGTTACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027970.14 ENSMUST00000171447.8 |
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| CDS CCA 72 bp | GCCCGGGCCGCACTTCCACGGCGTGCCCTGCCGAGCTaGCGGGACTGGCAGTCGGAGCCTGGCGCTCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ARAALPRRALPS*RDWQSEPGARS Trigger: GCTGCGAGCGCCAGGCTCCGACTGCCAGTCCCGCCAGCTCGGCAGGGCACGCCGTGGAAGTGCGGCCCGGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| CDS GCA 72 bp | GATGCCCGCCTCCCTCAGATGGCCCGGTTCCGCCACTaGCGCTGCCCCACCCAGATACAGCCCGGGCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: DARLPQMARFRH*RCPTQIQPGPH Trigger: GTGCGGCCCGGGCTGTATCTGGGTGGGGCAGCGGCAGTGGCGGAACCGGGCCATCTGAGGGAGGCGGGCATC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| CDS CCA 72 bp | CAGTGCACCAACACCGCGCGGCCTTCGGAGCGAGCCTaGCCGATGAAGGCCACGCAGCGATCCAGGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: QCTNTARPSERA*PMKATQRSRWL Trigger: CAGCCACCTGGATCGCTGCGTGGCCTTCATCGGCCAGGCTCGCTCCGAAGGCCGCGCGGTGTTGGTGCACTG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 ENSMUST00000171447.8 |
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| CDS CCA 72 bp | CGAGCCTGGCCGATGAAGGCCACGCAGCGATCCAGGTaGCTGAGCAGGTCGGTCTCGGGTTTGTCCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: RAWPMKATQRSR*LSRSVSGLSSA Trigger: GGCGCTGGACAAACCCGAGACCGACCTGCTCAGCCACCTGGATCGCTGCGTGGCCTTCATCGGCCAGGCTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 ENSMUST00000171447.8 |
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| CDS CAA 72 bp | CAGCGATCCAGGTGGCTGAGCAGGTCGGTCTCGGGTTaGTCCAGCGCCGGCACGAAGAGGCTCCGGAGACCT | + |
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Preference number: 6 (lower is better) Translates to: QRSRWLSRSVSG*SSAGTKRLRRP Trigger: AGGTCTCCGGAGCCTCTTCGTGCCGGCGCTGGACAAACCCGAGACCGACCTGCTCAGCCACCTGGATCGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 ENSMUST00000171447.8 |
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| CDS CAA 90 bp | AAGGCCACGCAGCGATCCAGGTGGCTGAGCAGGTCGGTCTCGGGTTaGTCCAGCGCCGGCACGAAGAGGCTCCGGAGACCTTCGAACCCA | + |
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Preference number: 6 (lower is better) Translates to: KATQRSRWLSRSVSG*SSAGTKRLRRPSNP Trigger: TGGGTTCGAAGGTCTCCGGAGCCTCTTCGTGCCGGCGCTGGACAAACCCGAGACCGACCTGCTCAGCCACCTGGATCGCTGCGTGGCCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| CDS TCA 72 bp | GCCATCACTACAGCAACACTGCGACTGACTCCTGCATaGCAGTGCACCAACACCGCGCGGCCTTCGGAGCGA | + |
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Preference number: 6 (lower is better) Translates to: AITTATLRLTPA*QCTNTARPSER Trigger: TCGCTCCGAAGGCCGCGCGGTGTTGGTGCACTGTCATGCAGGAGTCAGTCGCAGTGTTGCTGTAGTGATGGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000171447.8 |
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| CDS GCA 72 bp | AAAAGCCATCACTACAGCAACACTGCGACTGACTCCTaGATGACAGTGCACCAACACCGCGCGGCCTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: KSHHYSNTATDS*MTVHQHRAAFG Trigger: TCCGAAGGCCGCGCGGTGTTGGTGCACTGTCATGCAGGAGTCAGTCGCAGTGTTGCTGTAGTGATGGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027970.14 ENSMUST00000046476.13 ENSMUST00000171447.8 |
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| CDS TCA 72 bp | GCCATCACTACAGCAACACTGCGACTGACTCCTGCATaGCTGAAAAAGAGACCAGTGCACCAACACCGCGCG | + |
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Preference number: 6 (lower is better) Translates to: AITTATLRLTPA*LKKRPVHQHRA Trigger: CGCGCGGTGTTGGTGCACTGGTCTCTTTTTCAGTCATGCAGGAGTCAGTCGCAGTGTTGCTGTAGTGATGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163252.8 ENSMUST00000166393.2 ENSMUST00000170420.8 |
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| CDS CCA 72 bp | CAGTTGCCATTCAAACCCCTCATTCACTTTAGCCTCTaGCTTGACCGTCCGGAGGATGTCGTAGGCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: QLPFKPLIHFSL*LDRPEDVVGFF Trigger: GAAAAAGCCTACGACATCCTCCGGACGGTCAAGCCAGAGGCTAAAGTGAATGAGGGGTTTGAATGGCAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027970.14 ENSMUST00000171447.8 |
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| CDS CAA 90 bp | CGACCACAGGAGCACTGTTCACCATACCAGTTAAAGGAACCCAACTaGGCACTGCATTTTGGGCAAAGAAGCTGCATTTTCTGCATTTGT | + |
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Preference number: 6 (lower is better) Translates to: RPQEHCSPYQLKEPN*ALHFGQRSCIFCIC Trigger: ACAAATGCAGAAAATGCAGCTTCTTTGCCCAAAATGCAGTGCCAAGTTGGGTTCCTTTAACTGGTATGGTGAACAGTGCTCCTGTGGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171447.8 |
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