Pregenerated sensors for DUSP11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030002Ensembl transcript IDs: ENSMUST00000032071.13, ENSMUST00000201530.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTACCTGGCAGTGTCCTCCAGAGGCTGCTTGTCAATGTGTTCTTTaGACCGTCCAGACTGGGTGCATTCTGTACCTGTCCCAGCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: PTWQCPPEAACQCVL*TVQTGCILYLSQLC Trigger: ACAAAGCTGGGACAGGTACAGAATGCACCCAGTCTGGACGGTGCAAAGAACACATTGACAAGCAGCCTCTGGAGGACACTGCCAGGTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | TATCCACCTCACTCTCTGGCAAGCAGCTCAAGGAGCCTGATGCCATaGCCTAGTGTGTCCCATCCCCCTTTAGTTGAAAGTGGGGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: YPPHSLASSSRSLMP*PSVSHPPLVESGVS Trigger: TGAAACCCCACTTTCAACTAAAGGGGGATGGGACACACTAGGCCATGGCATCAGGCTCCTTGAGCTGCTTGCCAGAGAGTGAGGTGGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR GCA 90 bp | CCAGAGGCTGCTTGTCAATGTGTTCTTTGCACCGTCCAGACTGGGTaGATTCTGTACCTGTCCCAGCTTTGTCCTCTTTTGGTTCCTAAC | + |
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Preference number: 1 (lower is better) Translates to: PEAACQCVLCTVQTG*ILYLSQLCPLLVPN Trigger: GTTAGGAACCAAAAGAGGACAAAGCTGGGACAGGTACAGAATGCACCCAGTCTGGACGGTGCAAAGAACACATTGACAAGCAGCCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | CACCCTCCCAGCCCTGAGAGGCTGCTGAAGGACATAATGAGCAAATaGGAAATTATAGTCATGGAAGTAGAACCCTGGGACCCAGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: HPPSPERLLKDIMSK*EIIVMEVEPWDPGS Trigger: AGAACCTGGGTCCCAGGGTTCTACTTCCATGACTATAATTTCCCATTTGCTCATTATGTCCTTCAGCAGCCTCTCAGGGCTGGGAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | TTTAGAATTTGTTATCTATTCAGAACTCTGAGAAAAGTTGAGGCCTaGAATGGAGGTGCTCTAGACTGCCGGAGCCACCGCGTCCGCCAG | + |
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Preference number: 1 (lower is better) Translates to: FRICYLFRTLRKVEA*NGGALDCRSHRVRQ Trigger: CTGGCGGACGCGGTGGCTCCGGCAGTCTAGAGCACCTCCATTCCAGGCCTCAACTTTTCTCAGAGTTCTGAATAGATAACAAATTCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | ACAAAGGACTTGAAAAGTCAGTTTACGGCCAGATACAGAAAGCCTTaGCAGTCCCTGCCCCAAGGCCGTAAGCCATTTGTCTCTTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: TKDLKSQFTARYRKP*QSLPQGRKPFVSSK Trigger: CTTGGAAGAGACAAATGGCTTACGGCCTTGGGGCAGGGACTGCCAAGGCTTTCTGTATCTGGCCGTAAACTGACTTTTCAAGTCCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | AATATGCTGCCCTGCTTCAGTAAGCCAAGAACACGCCAGGCTCCCTaGCATGACAGTCTCAGTCTGGACTTTCTCTGGAAGCTCATTAAT | + |
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Preference number: 1 (lower is better) Translates to: NMLPCFSKPRTRQAP*HDSLSLDFLWKLIN Trigger: ATTAATGAGCTTCCAGAGAAAGTCCAGACTGAGACTGTCATGCCAGGGAGCCTGGCGTGTTCTTGGCTTACTGAAGCAGGGCAGCATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR TCA 90 bp | AAACAGATCCACTTCTGTGGCTCGGCTGTTACACCCTCCCAGCCCTaGGAGGCTGCTGAAGGACATAATGAGCAAATGGGAAATTATAGT | + |
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Preference number: 1 (lower is better) Translates to: KQIHFCGSAVTPSQP*EAAEGHNEQMGNYS Trigger: ACTATAATTTCCCATTTGCTCATTATGTCCTTCAGCAGCCTCTCAGGGCTGGGAGGGTGTAACAGCCGAGCCACAGAAGTGGATCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | GGCACAGCTCAATTACAGAGTACATGCCTGGCATGCTCAAGGCCCTaGTCAATCCCAGCATCTACAACCCCAATGTATCAGAAGAAAAGT | + |
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Preference number: 1 (lower is better) Translates to: GTAQLQSTCLACSRP*SIPASTTPMYQKKS Trigger: ACTTTTCTTCTGATACATTGGGGTTGTAGATGCTGGGATTGACCAGGGCCTTGAGCATGCCAGGCATGTACTCTGTAATTGAGCTGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR TCA 90 bp | AATGAGGTCTCCACAGTGAGTCTGAGTCTAATGACCTGGCATCTTTaGGAAGACAGAGCTGGCGATGCATCTCAGCGTATCATAAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: NEVSTVSLSLMTWHL*EDRAGDASQRIIRE Trigger: TTCCCTTATGATACGCTGAGATGCATCGCCAGCTCTGTCTTCTCAAAGATGCCAGGTCATTAGACTCAGACTCACTGTGGAGACCTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR TCA 90 bp | TTCAACAGCCAACAGCAACCGTCTGAACACCATGAACTAGGACTCTaGAAAGTGCCTACCTACTGCTCATCAAAGGACAGGAGCAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: FNSQQQPSEHHELGL*KVPTYCSSKDRSRE Trigger: TTCTCTGCTCCTGTCCTTTGATGAGCAGTAGGTAGGCACTTTTCAGAGTCCTAGTTCATGGTGTTCAGACGGTTGCTGTTGGCTGTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | ACACGCCAGGCTCCCTGGCATGACAGTCTCAGTCTGGACTTTCTCTaGAAGCTCATTAATGAAACTGTACAAGTGATCTACAGCAGAACA | + |
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Preference number: 1 (lower is better) Translates to: TRQAPWHDSLSLDFL*KLINETVQVIYSRT Trigger: TGTTCTGCTGTAGATCACTTGTACAGTTTCATTAATGAGCTTCCAGAGAAAGTCCAGACTGAGACTGTCATGCCAGGGAGCCTGGCGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR TCA 90 bp | AACTTCATCAAAGGCTGCAAAGGGCTGTGGAGTGAGTGGGTAGGCTaGGAGCTAAATCCTCATTTGCCAAAGGAAGAATTCATCAACGCA | + |
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Preference number: 1 (lower is better) Translates to: NFIKGCKGLWSEWVG*ELNPHLPKEEFINA Trigger: TGCGTTGATGAATTCTTCCTTTGGCAAATGAGGATTTAGCTCTCAGCCTACCCACTCACTCCACAGCCCTTTGCAGCCTTTGATGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR GCA 90 bp | ATCACTCGCTGGGGCAGGCTTTCTAAAAAGTGGTTCATACATGGATaGCTGGCTCAGATCACAGCACAGATTACAGCCAAAGAACAACTT | + |
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Preference number: 1 (lower is better) Translates to: ITRWGRLSKKWFIHG*LAQITAQITAKEQL Trigger: AAGTTGTTCTTTGGCTGTAATCTGTGCTGTGATCTGAGCCAGGCATCCATGTATGAACCACTTTTTAGAAAGCCTGCCCCAGCGAGTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | TCCAGACTGGGTGCATTCTGTACCTGTCCCAGCTTTGTCCTCTTTTaGTTCCTAACTGTCTGTTCCAGTTTCTTACACTGGACAATACAC | + |
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Preference number: 1 (lower is better) Translates to: SRLGAFCTCPSFVLF*FLTVCSSFLHWTIH Trigger: GTGTATTGTCCAGTGTAAGAAACTGGAACAGACAGTTAGGAACCAAAAGAGGACAAAGCTGGGACAGGTACAGAATGCACCCAGTCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | CTCGCTGGGGCAGGCTTTCTAAAAAGTGGTTCATACATGGATGCCTaGCTCAGATCACAGCACAGATTACAGCCAAAGAACAACTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: LAGAGFLKSGSYMDA*LRSQHRLQPKNNFQ Trigger: TTGAAAGTTGTTCTTTGGCTGTAATCTGTGCTGTGATCTGAGCCAGGCATCCATGTATGAACCACTTTTTAGAAAGCCTGCCCCAGCGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR TCA 90 bp | GTATCTGAAATATCACCGCATTTGGGGAGTCTTTCAAGAGGCAAATaGGGTCTCCACAGTGAGTCTGAGTCTAATGACCTGGCATCTTTG | + |
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Preference number: 1 (lower is better) Translates to: VSEISPHLGSLSRGK*GLHSESESNDLASL Trigger: CAAAGATGCCAGGTCATTAGACTCAGACTCACTGTGGAGACCTCATTTGCCTCTTGAAAGACTCCCCAAATGCGGTGATATTTCAGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR GCA 90 bp | TTAGGCGGGCTACCTCTGAGACTGACAATCAAGAAACATGCAGGGTaGCTTTCCATGGGAATTTCAGGAAAGCTACCTGAGAAAATATTC | + |
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Preference number: 1 (lower is better) Translates to: LGGLPLRLTIKKHAG*LSMGISGKLPEKIF Trigger: GAATATTTTCTCAGGTAGCTTTCCTGAAATTCCCATGGAAAGGCACCCTGCATGTTTCTTGATTGTCAGTCTCAGAGGTAGCCCGCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | ATCTACAGAGGGTTTCTAGCCTCCTGGATAGTTCTACCCTGTTGGTaGCAGTTACCCAACTTGGCAATCAACCAGTACCTAAAGTTTGAA | + |
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Preference number: 1 (lower is better) Translates to: IYRGFLASWIVLPCW*QLPNLAINQYLKFE Trigger: TTCAAACTTTAGGTACTGGTTGATTGCCAAGTTGGGTAACTGCCACCAACAGGGTAGAACTATCCAGGAGGCTAGAAACCCTCTGTAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | AGCACAGTGTACACAAAGTACACTGTAGAAAAAGAGATCACTCGCTaGGGCAGGCTTTCTAAAAAGTGGTTCATACATGGATGCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: STVYTKYTVEKEITR*GRLSKKWFIHGCLA Trigger: AGCCAGGCATCCATGTATGAACCACTTTTTAGAAAGCCTGCCCCAGCGAGTGATCTCTTTTTCTACAGTGTACTTTGTGTACACTGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | AAAATCTACAGAGGGTTTCTAGCCTCCTGGATAGTTCTACCCTGTTaGTGGCAGTTACCCAACTTGGCAATCAACCAGTACCTAAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: KIYRGFLASWIVLPC*WQLPNLAINQYLKF Trigger: AAACTTTAGGTACTGGTTGATTGCCAAGTTGGGTAACTGCCACCAACAGGGTAGAACTATCCAGGAGGCTAGAAACCCTCTGTAGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR TCA 90 bp | ACGAGTGGAGGAGATGTTAAGACACAGAAGACCGCAAGAAGACAGTaGAGTACCAGTCATCTACAAGAAGAAATTCTTGCTGACTCTATC | + |
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Preference number: 1 (lower is better) Translates to: TSGGDVKTQKTARRQ*STSHLQEEILADSI Trigger: GATAGAGTCAGCAAGAATTTCTTCTTGTAGATGACTGGTACTTCACTGTCTTCTTGCGGTCTTCTGTGTCTTAACATCTCCTCCACTCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR GCA 90 bp | GAGGAAAGGAACACAGGAATTTGTTTTCTGGGAAGCTGTAAGTTTTaGTGGAAAGGCTATTTAATTAGGATTCCACATGGGACCTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: EERNTGICFLGSCKF*WKGYLIRIPHGTSL Trigger: GAGGGAGGTCCCATGTGGAATCCTAATTAAATAGCCTTTCCAGCAAAACTTACAGCTTCCCAGAAAACAAATTCCTGTGTTCCTTTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | GAAAGGAACACAGGAATTTGTTTTCTGGGAAGCTGTAAGTTTTGCTaGAAAGGCTATTTAATTAGGATTCCACATGGGACCTCCCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: ERNTGICFLGSCKFC*KGYLIRIPHGTSLH Trigger: ATGGAGGGAGGTCCCATGTGGAATCCTAATTAAATAGCCTTTCCAGCAAAACTTACAGCTTCCCAGAAAACAAATTCCTGTGTTCCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 90 bp | TACAGCCAAAGAACAACTTTCAAGACAGACTGTATGGCCACAAAATaGCTAGTATTCAGACAGAGGGTAAACAAAGGACTTGAAAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: YSQRTTFKTDCMATK*LVFRQRVNKGLEKS Trigger: TGACTTTTCAAGTCCTTTGTTTACCCTCTGTCTGAATACTAGCCATTTTGTGGCCATACAGTCTGTCTTGAAAGTTGTTCTTTGGCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR CCA 90 bp | GGTAGCTCTGGCCGTCCTGGATCTCCCTCTGTAGACCAAGCAGGTCTGGAGATCCCTACCAACGAGACCTaGCACCTGACTGGGGCATTT | + |
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Preference number: 2 (lower is better) Translates to: GSSGRPGSPSVDQAGLEIPTNET*HLTGAF Trigger: AAATGCCCCAGTCAGGTGCCAGGTCTCGTTGGTAGG...GATCTCCAGACCTGCTTGGTCTACAGAGGGAGATCCAGGACGGCCAGAGCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR TCA 90 bp | CATACACGGCAGCATTCCACTCCAAGGGGAGGGGGAAGGAAAGATGTTTACATAGGAGCCTGGGGCAGATaGCTGCTGGAGCCCTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: HTRQHSTPRGGGRKDVYIGAWGR*LLEPWS Trigger: ACTCCAGGGCTCCAGCAGTCATCTGCCCCAGGCTCC...TATGTAAACATCTTTCCTTCCCCCTCCCCTTGGAGTGGAATGCTGCCGTGTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR CCA 90 bp | GCTGGAGGCACAGCTCAATTACAGAGTACATGCCTGGCATGCTCAAGGCCCTGGGAGGAACAGGGCAGGTaGCAGGAACAACTCCTAACC | + |
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Preference number: 2 (lower is better) Translates to: AGGTAQLQSTCLACSRPWEEQGR*QEQLLT Trigger: GGTTAGGAGTTGTTCCTGCCACCTGCCCTGTTCCTC...CCAGGGCCTTGAGCATGCCAGGCATGTACTCTGTAATTGAGCTGTGCCTCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CAA 90 bp | CCCTACCTGGCAGTGTCCTCCAGAGGCTGCTTGTCAATGTGTTCTTaGCACCGTCCAGACTGGGTGCATTCTGTACCTGTCCCAGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: PYLAVSSRGCLSMCS*HRPDWVHSVPVPAL Trigger: CAAAGCTGGGACAGGTACAGAATGCACCCAGTCTGGACGGTGCAAAGAACACATTGACAAGCAGCCTCTGGAGGACACTGCCAGGTAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CAA 90 bp | TTAAAATCTAGAGCCAGGCAAGAGAGCAGGTACCTGACGTCCTACTaGCTCTGGAGCCTGGGGCAGATGACTGCTGGAGCCCTGGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: LKSRARQESRYLTSY*LWSLGQMTAGALEF Trigger: GAACTCCAGGGCTCCAGCAGTCATCTGCCCCAGGCTCCAGAGCAAGTAGGACGTCAGGTACCTGCTCTCTTGCCTGGCTCTAGATTTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR CCA 90 bp | GGTAGCTCTGGCCGTCCTGGATCTCCCTCTGTAGACCAAGCAGGTCTGGAGATCGTTAGATGCCTTAGCTaGCAGGTCAGCAAGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: GSSGRPGSPSVDQAGLEIVRCLS*QVSKKL Trigger: CAGCTTCTTGCTGACCTGCCAGCTAAGGCATCTAAC...GATCTCCAGACCTGCTTGGTCTACAGAGGGAGATCCAGGACGGCCAGAGCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR TCA 90 bp | GGTAGCTCTGGCCGTCCTGGATCTCCCTCTGTAGACCAAGCAGGTCTGGAGATCCACTGGACAATACACTaGCCCAGTATATTCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: GSSGRPGSPSVDQAGLEIHWTIH*PSIFWG Trigger: TCCCCAGAATATACTGGGTCAGTGTATTGTCCAGTG...GATCTCCAGACCTGCTTGGTCTACAGAGGGAGATCCAGGACGGCCAGAGCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR TCA 90 bp | GTGAGTACGGTGAGCTCTGCGTCTGGTGCTGGAAATGCTGGGAAGGTGCCAGATCATTCCGGTTCTTTCTaGCATGACGTTTCTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: VSTVSSASGAGNAGKVPDHSGSF*HDVSAG Trigger: ACCTGCAGAAACGTCATGTCAGAAAGAACCGGAATG...ATCTGGCACCTTCCCAGCATTTCCAGCACCAGACGCAGAGCTCACCGTACTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201530.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGAAAGCTGGAAGGGTGGAGTCTGGGGCTGCGGTAAATTCCTTGGTCAGGAAAGTGCCTACCTACTaGTCATCAAAGGACAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: PEKAGRVESGAAVNSLVRKVPTY*SSKDRS Trigger: GCTCCTGTCCTTTGATGAGCAGTAGGTAGGCACTTT...CCTGACCAAGGAATTTACCGCAGCCCCAGACTCCACCCTTCCAGCTTTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR CCA 90 bp | CATACACGGCAGCATTCCACTCCAAGGGGAGGGGGAAGGAAAGATGTTTACATATCTTCTGTCCAGCTCTaGTCTCAGGTGGCCCTGACG | + |
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Preference number: 2 (lower is better) Translates to: HTRQHSTPRGGGRKDVYISSVQL*SQVALT Trigger: CGTCAGGGCCACCTGAGACCAGAGCTGGACAGAAGA...TATGTAAACATCTTTCCTTCCCCCTCCCCTTGGAGTGGAATGCTGCCGTGTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGAAAGCTGGAAGGGTGGAGTCTGGGGCTGCGGTAAATTCCTTGGTCAGGTCATACATGGATGCCTaGCTCAGATCACAGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: PEKAGRVESGAAVNSLVRSYMDA*LRSQHR Trigger: TCTGTGCTGTGATCTGAGCCAGGCATCCATGTATGA...CCTGACCAAGGAATTTACCGCAGCCCCAGACTCCACCCTTCCAGCTTTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGAAAGCTGGAAGGGTGGAGTCTGGGGCTGCGGTAAATTCCTTGGTCAGGTTGTATTGTGTGACATaGACAGAAGCCAGACGAGTG | + |
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Preference number: 2 (lower is better) Translates to: PEKAGRVESGAAVNSLVRLYCVT*TEARRV Trigger: CACTCGTCTGGCTTCTGTCCATGTCACACAATACAA...CCTGACCAAGGAATTTACCGCAGCCCCAGACTCCACCCTTCCAGCTTTCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR CCA 90 bp | GCTGGAGGCACAGCTCAATTACAGAGTACATGCCTGGCATGCTCAAGGCCCTGGATGGAAGTAGAACCCTaGGACCCAGGTTCTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: AGGTAQLQSTCLACSRPWMEVEP*DPGSKK Trigger: TTTCTTAGAACCTGGGTCCCAGGGTTCTACTTCCAT...CCAGGGCCTTGAGCATGCCAGGCATGTACTCTGTAATTGAGCTGTGCCTCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGAAAGCTGGAAGGGTGGAGTCTGGGGCTGCGGTAAATTCCTTGGTCAGGGGTAAACAAAGGACTTaGAAAGTCAGTTTACGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PEKAGRVESGAAVNSLVRGKQRT*KVSLRP Trigger: TGGCCGTAAACTGACTTTTCAAGTCCTTTGTTTACC...CCTGACCAAGGAATTTACCGCAGCCCCAGACTCCACCCTTCCAGCTTTCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGAAAGCTGGAAGGGTGGAGTCTGGGGCTGCGGTAAATTCCTTGGTCAGGTTAGTTCAGAATGCATaGCAGGGTGTTATGCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: PEKAGRVESGAAVNSLVRLVQNA*QGVMLR Trigger: TCTCAGCATAACACCCTGTCATGCATTCTGAACTAA...CCTGACCAAGGAATTTACCGCAGCCCCAGACTCCACCCTTCCAGCTTTCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR GCA 90 bp | CACAACAAGAAGCACTTTGAATCTGTTAATGTGATGGGTAGAGAAAAAGCCATCGGAGGTGCTCTAGACTaGCGGAGCCACCGCGTCCGC | + |
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Preference number: 2 (lower is better) Translates to: HNKKHFESVNVMGREKAIGGALD*RSHRVR Trigger: GCGGACGCGGTGGCTCCGGCAGTCTAGAGCACCTCC...GATGGCTTTTTCTCTACCCATCACATTAACAGATTCAAAGTGCTTCTTGTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR GCA 90 bp | CCTACCTACTGCTCATCAAAGGACAGGAGCAGAGAAGCAAACAGATCCACTTCTACCGTCCAGACTGGGTaGATTCTGTACCTGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PTYCSSKDRSREANRSTSTVQTG*ILYLSQ Trigger: CTGGGACAGGTACAGAATGCACCCAGTCTGGACGGT...AGAAGTGGATCTGTTTGCTTCTCTGCTCCTGTCCTTTGATGAGCAGTAGGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR GCA 90 bp | GCTCATCAAAGGACAGGAGCAGAGAAGCAAACAGATCCACTTCTGTGGCTCGGCGACAATCAAGAAACATaGAGGGTGCCTTTCCATGGG | + |
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Preference number: 2 (lower is better) Translates to: AHQRTGAEKQTDPLLWLGDNQET*RVPFHG Trigger: CCCATGGAAAGGCACCCTGCATGTTTCTTGATTGTC...GCCGAGCCACAGAAGTGGATCTGTTTGCTTCTCTGCTCCTGTCCTTTGATGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR GCA 90 bp | CATGGCTGCCAGATCCATAAGACACTTGAGGTCCTCCAGGAAGCAGGTCTTGAGTGGTTCATACATGGATaGCTGGCTCAGATCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: HGCQIHKTLEVLQEAGLEWFIHG*LAQITA Trigger: TGCTGTGATCTGAGCCAGGCATCCATGTATGAACCA...CTCAAGACCTGCTTCCTGGAGGACCTCAAGTGTCTTATGGATCTGGCAGCCATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR CCA 90 bp | CATGGCTGCCAGATCCATAAGACACTTGAGGTCCTCCAGGAAGCAGGTCTTGAGAGGTCAGCAAGAAGCTaGTCAAATCCCAACACTGAC | + |
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Preference number: 2 (lower is better) Translates to: HGCQIHKTLEVLQEAGLERSARS*SNPNTD Trigger: GTCAGTGTTGGGATTTGACCAGCTTCTTGCTGACCT...CTCAAGACCTGCTTCCTGGAGGACCTCAAGTGTCTTATGGATCTGGCAGCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGAAAGCTGGAAGGGTGGAGTCTGGGGCTGCGGTAAATTCCTTGGTCAGGCACTGGTGTTTTCTTTaGCGTACACATACATACAGA | + |
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Preference number: 2 (lower is better) Translates to: PEKAGRVESGAAVNSLVRHWCFL*RTHTYR Trigger: TCTGTATGTATGTGTACGTCAAAGAAAACACCAGTG...CCTGACCAAGGAATTTACCGCAGCCCCAGACTCCACCCTTCCAGCTTTCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR GCA 90 bp | GGTAGCTCTGGCCGTCCTGGATCTCCCTCTGTAGACCAAGCAGGTCTGGAGATCGAGAGAAAACTACTGTaGATAGCAAAAACTTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GSSGRPGSPSVDQAGLEIERKLL*IAKTCC Trigger: ACAGCAAGTTTTTGCTATGCACAGTAGTTTTCTCTC...GATCTCCAGACCTGCTTGGTCTACAGAGGGAGATCCAGGACGGCCAGAGCTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CCA 90 bp | CATACACGGCAGCATTCCACTCCAAGGGGAGGGGGAAGGAAAGATGTTTACATAGGGTTTCTAGCCTCCTaGATAGTTCTACCCTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: HTRQHSTPRGGGRKDVYIGFLAS*IVLPCW Trigger: CCAACAGGGTAGAACTATCCAGGAGGCTAGAAACCC...TATGTAAACATCTTTCCTTCCCCCTCCCCTTGGAGTGGAATGCTGCCGTGTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CCA 90 bp | TCATCAAAGGACAGGAGCAGAGAAGCAAACAGATCCACTTCTGTGGCTCGGCTGTTGAGAAGACAGAGCTaGCGATGCATCTCAGCGTAT | + |
|
Preference number: 2 (lower is better) Translates to: SSKDRSREANRSTSVARLLRRQS*RCISAY Trigger: ATACGCTGAGATGCATCGCCAGCTCTGTCTTCTCAA...CAGCCGAGCCACAGAAGTGGATCTGTTTGCTTCTCTGCTCCTGTCCTTTGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAGAAAGCTGGAAGGGTGGAGTCTGGGGCTGCGGTAAATTCCTTGGTCAGGAGGCTTTCTAAAAAGTaGTTCATACATGGATGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: PEKAGRVESGAAVNSLVRRLSKK*FIHGCL Trigger: CAGGCATCCATGTATGAACCACTTTTTAGAAAGCCT...CCTGACCAAGGAATTTACCGCAGCCCCAGACTCCACCCTTCCAGCTTTCTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CAA 90 bp | GCTGCCAGATCCATAAGACACTTGAGGTCCTCCAGGAAGCAGGTCTaGAGGCGAGGATTAAGAACTAAGTCACTGGTGTTTTCTTTGACG | + |
|
Preference number: 2 (lower is better) Translates to: AARSIRHLRSSRKQV*RRGLRTKSLVFSLT Trigger: CGTCAAAGAAAACACCAGTGACTTAGTTCTTAATCCTCGCCTCAAGACCTGCTTCCTGGAGGACCTCAAGTGTCTTATGGATCTGGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR TCA 90 bp | AAATTCTTGCTGACTCTATCCTTCCCAGCTTCTAAAACTATGAGACACAAAAAGGGTCTCAGGTGGCCCTaGCGACAGTCCAGCCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: KFLLTLSFPASKTMRHKKGLRWP*RQSSHS Trigger: GCTGTGGCTGGACTGTCGTCAGGGCCACCTGAGACC...CTTTTTGTGTCTCATAGTTTTAGAAGCTGGGAAGGATAGAGTCAGCAAGAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR TCA 90 bp | CCTACCTACTGCTCATCAAAGGACAGGAGCAGAGAAGCAAACAGATCCACTTCTAACTCTGAGAAAAGTTaGGGCCTGGAATGGAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: PTYCSSKDRSREANRSTSNSEKS*GLEWRC Trigger: GCACCTCCATTCCAGGCCTCAACTTTTCTCAGAGTT...AGAAGTGGATCTGTTTGCTTCTCTGCTCCTGTCCTTTGATGAGCAGTAGGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CCA 90 bp | CATGGCTGCCAGATCCATAAGACACTTGAGGTCCTCCAGGAAGCAGGTCTTGAGAGCTTTGTCCTCTTTTaGTTCCTAACTGTCTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: HGCQIHKTLEVLQEAGLESFVLF*FLTVCS Trigger: GGAACAGACAGTTAGGAACCAAAAGAGGACAAAGCT...CTCAAGACCTGCTTCCTGGAGGACCTCAAGTGTCTTATGGATCTGGCAGCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR TCA 90 bp | ACCTCTGAGACTGACAATCAAGAAACATGCAGGGTGCCTTTCCATGGGAATTTCGGCCTTTGTATTGTGTaGCATGGACAGAAGCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: TSETDNQETCRVPFHGNFGLCIV*HGQKPD Trigger: GTCTGGCTTCTGTCCATGTCACACAATACAAAGGCC...GAAATTCCCATGGAAAGGCACCCTGCATGTTTCTTGATTGTCAGTCTCAGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGAAAGCTGGAAGGGTGGAGTCTGGGGCTGCGGTAAATTCCTTGGTCAGGGGAAGCTGTAAGTTTTaGTGGAAAGGCTATTTAATT | + |
|
Preference number: 2 (lower is better) Translates to: PEKAGRVESGAAVNSLVRGSCKF*WKGYLI Trigger: AATTAAATAGCCTTTCCAGCAAAACTTACAGCTTCC...CCTGACCAAGGAATTTACCGCAGCCCCAGACTCCACCCTTCCAGCTTTCTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CCA 90 bp | CCTACCTACTGCTCATCAAAGGACAGGAGCAGAGAAGCAAACAGATCCACTTCTCAGGGTGCCTTTCCATaGGAATTTCAGGAAAGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: PTYCSSKDRSREANRSTSQGAFP*EFQESY Trigger: GTAGCTTTCCTGAAATTCCCATGGAAAGGCACCCTG...AGAAGTGGATCTGTTTGCTTCTCTGCTCCTGTCCTTTGATGAGCAGTAGGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CCA 90 bp | CATACACGGCAGCATTCCACTCCAAGGGGAGGGGGAAGGAAAGATGTTTACATAAAAGTGGTTCATACATaGATGCCTGGCTCAGATCAC | + |
|
Preference number: 2 (lower is better) Translates to: HTRQHSTPRGGGRKDVYIKVVHT*MPGSDH Trigger: GTGATCTGAGCCAGGCATCCATGTATGAACCACTTT...TATGTAAACATCTTTCCTTCCCCCTCCCCTTGGAGTGGAATGCTGCCGTGTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CAA 90 bp | GTCCAGACTGGGTGCATTCTGTACCTGTCCCAGCTTTGTCCTCTTTaGGTTCCTAACTGTCTGTTCCAGTTTCTTACACTGGACAATACA | + |
|
Preference number: 2 (lower is better) Translates to: VQTGCILYLSQLCPL*VPNCLFQFLTLDNT Trigger: TGTATTGTCCAGTGTAAGAAACTGGAACAGACAGTTAGGAACCAAAAGAGGACAAAGCTGGGACAGGTACAGAATGCACCCAGTCTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR GCA 90 bp | TCATCAAAGGACAGGAGCAGAGAAGCAAACAGATCCACTTCTGTGGCTCGGCTGTTGGGCAAAATTAGCTaGAAGCTGGAATACATGATC | + |
|
Preference number: 2 (lower is better) Translates to: SSKDRSREANRSTSVARLLGKIS*KLEYMI Trigger: GATCATGTATTCCAGCTTGCAGCTAATTTTGCCCAA...CAGCCGAGCCACAGAAGTGGATCTGTTTGCTTCTCTGCTCCTGTCCTTTGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CCA 90 bp | CATACACGGCAGCATTCCACTCCAAGGGGAGGGGGAAGGAAAGATGTTTACATATGTTATGCTGAGACATaGGACTTGCATAAACAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: HTRQHSTPRGGGRKDVYICYAET*DLHKQS Trigger: TGACTGTTTATGCAAGTCCCATGTCTCAGCATAACA...TATGTAAACATCTTTCCTTCCCCCTCCCCTTGGAGTGGAATGCTGCCGTGTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR TCA 90 bp | ACCTCTGAGACTGACAATCAAGAAACATGCAGGGTGCCTTTCCATGGGAATTTCATCTATTCAGAACTCTaGGAAAAGTTGAGGCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: TSETDNQETCRVPFHGNFIYSEL*EKLRPG Trigger: TCCAGGCCTCAACTTTTCTCAGAGTTCTGAATAGAT...GAAATTCCCATGGAAAGGCACCCTGCATGTTTCTTGATTGTCAGTCTCAGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CCA 90 bp | CATACACGGCAGCATTCCACTCCAAGGGGAGGGGGAAGGAAAGATGTTTACATACAGGAATTTGTTTTCTaGGAAGCTGTAAGTTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HTRQHSTPRGGGRKDVYIQEFVF*EAVSFA Trigger: AGCAAAACTTACAGCTTCCCAGAAAACAAATTCCTG...TATGTAAACATCTTTCCTTCCCCCTCCCCTTGGAGTGGAATGCTGCCGTGTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CCA 90 bp | AAATTCTTGCTGACTCTATCCTTCCCAGCTTCTAAAACTATGAGACACAAAAAGTTCTCCCTCAGTCTGTaGTACTCTAGCATGGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: KFLLTLSFPASKTMRHKKFSLSL*YSSMAA Trigger: GGCTGCCATGCTAGAGTACCACAGACTGAGGGAGAA...CTTTTTGTGTCTCATAGTTTTAGAAGCTGGGAAGGATAGAGTCAGCAAGAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CCA 90 bp | AAATTCTTGCTGACTCTATCCTTCCCAGCTTCTAAAACTATGAGACACAAAAAGAGAAAAGTTGAGGCCTaGAATGGAGGTGCTCTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: KFLLTLSFPASKTMRHKKRKVEA*NGGALD Trigger: GTCTAGAGCACCTCCATTCCAGGCCTCAACTTTTCT...CTTTTTGTGTCTCATAGTTTTAGAAGCTGGGAAGGATAGAGTCAGCAAGAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CCA 90 bp | AAATTCTTGCTGACTCTATCCTTCCCAGCTTCTAAAACTATGAGACACAAAAAGAACTTGACTAAAGTTTaGGCAAAATTAGCTGCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: KFLLTLSFPASKTMRHKKNLTKV*AKLAAS Trigger: GCTTGCAGCTAATTTTGCCCAAACTTTAGTCAAGTT...CTTTTTGTGTCTCATAGTTTTAGAAGCTGGGAAGGATAGAGTCAGCAAGAATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR GCA 72 bp | AGAAAAGTTGAGGCCTGGAATGGAGGTGCTCTAGACTaGCGGAGCCACCGCGTCCGCCAGCACAGAGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RKVEAWNGGALD*RSHRVRQHRAV Trigger: CACTGCTCTGTGCTGGCGGACGCGGTGGCTCCGGCAGTCTAGAGCACCTCCATTCCAGGCCTCAACTTTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | CAGGAACAACTCCTAACCGTGGCAGAACTCACGCAGTaGCCCTACCTGGCAGTGTCCTCCAGAGGCTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QEQLLTVAELTQ*PYLAVSSRGCL Trigger: CAAGCAGCCTCTGGAGGACACTGCCAGGTAGGGTCACTGCGTGAGTTCTGCCACGGTTAGGAGTTGTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CCA 72 bp | AGGACAGGAGCAGAGAAGCAAACAGATCCACTTCTGTaGCTCGGCTGTTACACCCTCCCAGCCCTGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RTGAEKQTDPLL*LGCYTLPALRG Trigger: GCCTCTCAGGGCTGGGAGGGTGTAACAGCCGAGCCACAGAAGTGGATCTGTTTGCTTCTCTGCTCCTGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR GCA 72 bp | ACAAGTGATCTACAGCAGAACAGGAAGAACGTCGTCTaGTTGCTAGGCGCCTCCTGTCCTCTGCAGGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TSDLQQNRKNVV*LLGASCPLQGE Trigger: CTCCCCCTGCAGAGGACAGGAGGCGCCTAGCAAGCAGACGACGTTCTTCCTGTTCTGCTGTAGATCACTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | CACTTCTGTGGCTCGGCTGTTACACCCTCCCAGCCCTaGGAGGCTGCTGAAGGACATAATGAGCAAATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HFCGSAVTPSQP*EAAEGHNEQMG Trigger: TCCCATTTGCTCATTATGTCCTTCAGCAGCCTCTCAGGGCTGGGAGGGTGTAACAGCCGAGCCACAGAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CCA 72 bp | CCCTGCTTCAGTAAGCCAAGAACACGCCAGGCTCCCTaGCATGACAGTCTCAGTCTGGACTTTCTCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PCFSKPRTRQAP*HDSLSLDFLWK Trigger: CTTCCAGAGAAAGTCCAGACTGAGACTGTCATGCCAGGGAGCCTGGCGTGTTCTTGGCTTACTGAAGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR GCA 72 bp | CAGTGTCCTCCAGAGGCTGCTTGTCAATGTGTTCTTTaGACCGTCCAGACTGGGTGCATTCTGTACCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QCPPEAACQCVL*TVQTGCILYLS Trigger: GGACAGGTACAGAATGCACCCAGTCTGGACGGTGCAAAGAACACATTGACAAGCAGCCTCTGGAGGACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| 3UTR CCA 72 bp | CACTCTCTGGCAAGCAGCTCAAGGAGCCTGATGCCATaGCCTAGTGTGTCCCATCCCCCTTTAGTTGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: HSLASSSRSLMP*PSVSHPPLVES Trigger: ACTTTCAACTAAAGGGGGATGGGACACACTAGGCCATGGCATCAGGCTCCTTGAGCTGCTTGCCAGAGAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | ACCATTCTAGTGTGGGAGGCCAGTGGACAGAGATCCTaGATTGAGGTCCTCGGAGTCAGTATAACCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TILVWEASGQRS*IEVLGVSITLS Trigger: GCTGAGGGTTATACTGACTCCGAGGACCTCAATTCAGGATCTCTGTCCACTGGCCTCCCACACTAGAATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CCA 72 bp | GGCTGCTTGTCAATGTGTTCTTTGCACCGTCCAGACTaGGTGCATTCTGTACCTGTCCCAGCTTTGTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GCLSMCSLHRPD*VHSVPVPALSS Trigger: AGAGGACAAAGCTGGGACAGGTACAGAATGCACCCAGTCTGGACGGTGCAAAGAACACATTGACAAGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CAA 90 bp | GCTCATCAAAGGACAGGAGCAGAGAAGCAAACAGATCCACTTCTGTGGCTCGGCGCCTCCTATGGACAGTaGTGTTTCCTCAAATTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AHQRTGAEKQTDPLLWLGASYGQ*CFLKLL Trigger: CAGCAATTTGAGGAAACACAACTGTCCATAGGAGGC...GCCGAGCCACAGAAGTGGATCTGTTTGCTTCTCTGCTCCTGTCCTTTGATGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR GCA 72 bp | TTTTGTGACCATTTTCTGAGTGAGTACGGTGAGCTCTaGGTCTGGTGCTGGAAATGCTGGGAAGGTGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FCDHFLSEYGEL*VWCWKCWEGAR Trigger: TCTGGCACCTTCCCAGCATTTCCAGCACCAGACGCAGAGCTCACCGTACTCACTCAGAAAATGGTCACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201530.2 |
||
| 3UTR CCA 72 bp | TGTTATCTATTCAGAACTCTGAGAAAAGTTGAGGCCTaGAATGGAGGTGCTCTAGACTGCCGGAGCCACCGC | + |
|
Preference number: 3 (lower is better) Translates to: CYLFRTLRKVEA*NGGALDCRSHR Trigger: GCGGTGGCTCCGGCAGTCTAGAGCACCTCCATTCCAGGCCTCAACTTTTCTCAGAGTTCTGAATAGATAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CCA 72 bp | TTGAAAAGTCAGTTTACGGCCAGATACAGAAAGCCTTaGCAGTCCCTGCCCCAAGGCCGTAAGCCATTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LKSQFTARYRKP*QSLPQGRKPFV Trigger: GACAAATGGCTTACGGCCTTGGGGCAGGGACTGCCAAGGCTTTCTGTATCTGGCCGTAAACTGACTTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CAA 90 bp | TCATCAAAGGACAGGAGCAGAGAAGCAAACAGATCCACTTCTGTGGCTCGGCTGGAAATATCACCGCATTaGGGGAGTCTTTCAAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SSKDRSREANRSTSVARLEISPH*GSLSRG Trigger: GCCTCTTGAAAGACTCCCCAAATGCGGTGATATTTC...CAGCCGAGCCACAGAAGTGGATCTGTTTGCTTCTCTGCTCCTGTCCTTTGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CAA 90 bp | CATACACGGCAGCATTCCACTCCAAGGGGAGGGGGAAGGAAAGATGTTTACATAGTCATACTGTGCTACTaGACATGGTGGCACAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: HTRQHSTPRGGGRKDVYIVILCY*TWWHRT Trigger: GGTTCTGTGCCACCATGTCAAGTAGCACAGTATGAC...TATGTAAACATCTTTCCTTCCCCCTCCCCTTGGAGTGGAATGCTGCCGTGTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CAA 90 bp | CATACACGGCAGCATTCCACTCCAAGGGGAGGGGGAAGGAAAGATGTTTACATATCCAGGAAGCAGGTCTaGAGGCGAGGATTAAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: HTRQHSTPRGGGRKDVYISRKQV*RRGLRT Trigger: AGTTCTTAATCCTCGCCTCAAGACCTGCTTCCTGGA...TATGTAAACATCTTTCCTTCCCCCTCCCCTTGGAGTGGAATGCTGCCGTGTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | TCCACAGTGAGTCTGAGTCTAATGACCTGGCATCTTTaGGAAGACAGAGCTGGCGATGCATCTCAGCGTATC | + |
|
Preference number: 3 (lower is better) Translates to: STVSLSLMTWHL*EDRAGDASQRI Trigger: GATACGCTGAGATGCATCGCCAGCTCTGTCTTCTCAAAGATGCCAGGTCATTAGACTCAGACTCACTGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR GCA 72 bp | GCTTGTCAATGTGTTCTTTGCACCGTCCAGACTGGGTaGATTCTGTACCTGTCCCAGCTTTGTCCTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ACQCVLCTVQTG*ILYLSQLCPLL Trigger: CAAAAGAGGACAAAGCTGGGACAGGTACAGAATGCACCCAGTCTGGACGGTGCAAAGAACACATTGACAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CCA 72 bp | AGAGGGTTTCTAGCCTCCTGGATAGTTCTACCCTGTTaGTGGCAGTTACCCAACTTGGCAATCAACCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: RGFLASWIVLPC*WQLPNLAINQY Trigger: GTACTGGTTGATTGCCAAGTTGGGTAACTGCCACCAACAGGGTAGAACTATCCAGGAGGCTAGAAACCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CCA 72 bp | CAATTACAGAGTACATGCCTGGCATGCTCAAGGCCCTaGTCAATCCCAGCATCTACAACCCCAATGTATCAG | + |
|
Preference number: 3 (lower is better) Translates to: QLQSTCLACSRP*SIPASTTPMYQ Trigger: CTGATACATTGGGGTTGTAGATGCTGGGATTGACCAGGGCCTTGAGCATGCCAGGCATGTACTCTGTAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CAA 90 bp | CCTACCTACTGCTCATCAAAGGACAGGAGCAGAGAAGCAAACAGATCCACTTCTTCCTCCAGAGGCTGCTaGTCAATGTGTTCTTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PTYCSSKDRSREANRSTSSSRGC*SMCSLH Trigger: GTGCAAAGAACACATTGACAAGCAGCCTCTGGAGGA...AGAAGTGGATCTGTTTGCTTCTCTGCTCCTGTCCTTTGATGAGCAGTAGGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CAA 90 bp | CCTACCTACTGCTCATCAAAGGACAGGAGCAGAGAAGCAAACAGATCCACTTCTAATGACCTGGCATCTTaGAGAAGACAGAGCTGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: PTYCSSKDRSREANRSTSNDLAS*RRQSWR Trigger: TCGCCAGCTCTGTCTTCTCAAAGATGCCAGGTCATT...AGAAGTGGATCTGTTTGCTTCTCTGCTCCTGTCCTTTGATGAGCAGTAGGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CAA 90 bp | CATACACGGCAGCATTCCACTCCAAGGGGAGGGGGAAGGAAAGATGTTTACATAAAGGCCGTAAGCCATTaGTCTCTTCCAAGAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HTRQHSTPRGGGRKDVYIKAVSH*SLPRGK Trigger: CTTTCCTCTTGGAAGAGACAAATGGCTTACGGCCTT...TATGTAAACATCTTTCCTTCCCCCTCCCCTTGGAGTGGAATGCTGCCGTGTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | CAACAGCAACCGTCTGAACACCATGAACTAGGACTCTaGAAAGTGCCTACCTACTGCTCATCAAAGGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: QQQPSEHHELGL*KVPTYCSSKDR Trigger: CCTGTCCTTTGATGAGCAGTAGGTAGGCACTTTTCAGAGTCCTAGTTCATGGTGTTCAGACGGTTGCTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | TTTGTTGTTGGTGTAGACTTGCTCCGTAGGATCTGCTaGGTCTTCAAGGCCATCTGTCCTAGGTGCACTAAC | + |
|
Preference number: 3 (lower is better) Translates to: FVVGVDLLRRIC*VFKAICPRCTN Trigger: GTTAGTGCACCTAGGACAGATGGCCTTGAAGACTCAGCAGATCCTACGGAGCAAGTCTACACCAACAACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201530.2 |
||
| 3UTR CCA 72 bp | AAAGAGATCACTCGCTGGGGCAGGCTTTCTAAAAAGTaGTTCATACATGGATGCCTGGCTCAGATCACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KEITRWGRLSKK*FIHGCLAQITA Trigger: TGCTGTGATCTGAGCCAGGCATCCATGTATGAACCACTTTTTAGAAAGCCTGCCCCAGCGAGTGATCTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | ACTGTCTGTTCCAGTTTCTTACACTGGACAATACACTaGCCCAGTATATTCTGGGGAAGAATTCCTCGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TVCSSFLHWTIH*PSIFWGRIPRG Trigger: CCCCCGAGGAATTCTTCCCCAGAATATACTGGGTCAGTGTATTGTCCAGTGTAAGAAACTGGAACAGACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | ATATCACCGCATTTGGGGAGTCTTTCAAGAGGCAAATaGGGTCTCCACAGTGAGTCTGAGTCTAATGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: ISPHLGSLSRGK*GLHSESESNDL Trigger: CAGGTCATTAGACTCAGACTCACTGTGGAGACCTCATTTGCCTCTTGAAAGACTCCCCAAATGCGGTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR GCA 72 bp | CTACCTCTGAGACTGACAATCAAGAAACATGCAGGGTaGCTTTCCATGGGAATTTCAGGAAAGCTACCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPLRLTIKKHAG*LSMGISGKLPE Trigger: CTCAGGTAGCTTTCCTGAAATTCCCATGGAAAGGCACCCTGCATGTTTCTTGATTGTCAGTCTCAGAGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR GCA 72 bp | TGGGGCAGGCTTTCTAAAAAGTGGTTCATACATGGATaGCTGGCTCAGATCACAGCACAGATTACAGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: WGRLSKKWFIHG*LAQITAQITAK Trigger: TTTGGCTGTAATCTGTGCTGTGATCTGAGCCAGGCATCCATGTATGAACCACTTTTTAGAAAGCCTGCCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CCA 72 bp | GGTGCATTCTGTACCTGTCCCAGCTTTGTCCTCTTTTaGTTCCTAACTGTCTGTTCCAGTTTCTTACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GAFCTCPSFVLF*FLTVCSSFLHW Trigger: CCAGTGTAAGAAACTGGAACAGACAGTTAGGAACCAAAAGAGGACAAAGCTGGGACAGGTACAGAATGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CCA 72 bp | TGCCCCACGTGTAAGGAACAGCCAGTTTGCCTCCTATaGACAGTTGTGTTTCCTCAAATTGCTGGTAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: CPTCKEQPVCLL*TVVFPQIAGKV Trigger: AACTTTACCAGCAATTTGAGGAAACACAACTGTCCATAGGAGGCAAACTGGCTGTTCCTTACACGTGGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | GTTACCCAACTTGGCAATCAACCAGTACCTAAAGTTTaGACCTTCTCTGTGTTAGATGCCTTAGCTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VTQLGNQPVPKV*TFSVLDALAGR Trigger: CCTGCCAGCTAAGGCATCTAACACAGAGAAGGTTCAAACTTTAGGTACTGGTTGATTGCCAAGTTGGGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR GCA 72 bp | TTGGGCAAAATTAGCTGCAAGCTGGAATACATGATCTaGCGGGACTTCATTAGGGAAAAGTTCCCTCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: LGKISCKLEYMI*RDFIREKFPPH Trigger: ATGTGGAGGGAACTTTTCCCTAATGAAGTCCCGGCAGATCATGTATTCCAGCTTGCAGCTAATTTTGCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR GCA 72 bp | TTCATGTGTAAGGTCAAACCATTAAGAGTGCATGGCTaGCAGATCCATAAGACACTTGAGGTCCTCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FMCKVKPLRVHG*QIHKTLEVLQE Trigger: TTCCTGGAGGACCTCAAGTGTCTTATGGATCTGGCAGCCATGCACTCTTAATGGTTTGACCTTACACATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CAA 90 bp | CATACACGGCAGCATTCCACTCCAAGGGGAGGGGGAAGGAAAGATGTTTACATATTACAATTTGCCATATaGAAAGGACTCAGCTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: HTRQHSTPRGGGRKDVYILQFAI*KGLSWY Trigger: ATACCAGCTGAGTCCTTTCAATATGGCAAATTGTAA...TATGTAAACATCTTTCCTTCCCCCTCCCCTTGGAGTGGAATGCTGCCGTGTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | AAAGTTTGGGCAAAATTAGCTGCAAGCTGGAATACATaGTCTGCCGGGACTTCATTAGGGAAAAGTTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KVWAKLAASWNT*SAGTSLGKSSL Trigger: GAGGGAACTTTTCCCTAATGAAGTCCCGGCAGATCATGTATTCCAGCTTGCAGCTAATTTTGCCCAAACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | GGTCTCACAACAAGAAGCACTTTGAATCTGTTAATGTaGTGGGTAGAGAAAAAGCCATCACTGGAGTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GLTTRSTLNLLM*WVEKKPSLECR Trigger: TCTGCACTCCAGTGATGGCTTTTTCTCTACCCATCACATTAACAGATTCAAAGTGCTTCTTGTTGTGAGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | GGTGTTTTCTTTGACGTACACATACATACAGAATGGTaGGGAAAGGTCTTAAGCAGGAAACAGCAAAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GVFFDVHIHTEW*GKVLSRKQQSH Trigger: GTGGCTTTGCTGTTTCCTGCTTAAGACCTTTCCTCACCATTCTGTATGTATGTGTACGTCAAAGAAAACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | AAAACTACTGTGCATAGCAAAAACTTGCTGTGGACTTaGTGTGTTATGAGGAGCAACTTCCTGAGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: KTTVHSKNLLWT*CVMRSNFLSEF Trigger: GAACTCACTCAGGAAGTTGCTCCTCATAACACATCAAGTCCACAGCAAGTTTTTGCTATGCACAGTAGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | GGAGATGTTAAGACACAGAAGACCGCAAGAAGACAGTaGAGTACCAGTCATCTACAAGAAGAAATTCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GDVKTQKTARRQ*STSHLQEEILA Trigger: AGCAAGAATTTCTTCTTGTAGATGACTGGTACTTCACTGTCTTCTTGCGGTCTTCTGTGTCTTAACATCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | CCACTATATAGCATATGGAAGTTAGTTCAGAATGCATaGCAGGGTGTTATGCTGAGACATGGGACTTGCATA | + |
|
Preference number: 3 (lower is better) Translates to: PLYSIWKLVQNA*QGVMLRHGTCI Trigger: TATGCAAGTCCCATGTCTCAGCATAACACCCTGTCATGCATTCTGAACTAACTTCCATATGCTATATAGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CCA 72 bp | TACACAAAGTACACTGTAGAAAAAGAGATCACTCGCTaGGGCAGGCTTTCTAAAAAGTGGTTCATACATGGA | + |
|
Preference number: 3 (lower is better) Translates to: YTKYTVEKEITR*GRLSKKWFIHG Trigger: TCCATGTATGAACCACTTTTTAGAAAGCCTGCCCCAGCGAGTGATCTCTTTTTCTACAGTGTACTTTGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR-3UTR CAA 90 bp | AAATTCTTGCTGACTCTATCCTTCCCAGCTTCTAAAACTATGAGACACAAAAAGCAGCTTTGTCCTCTTTaGGTTCCTAACTGTCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: KFLLTLSFPASKTMRHKKQLCPL*VPNCLF Trigger: GAACAGACAGTTAGGAACCAAAAGAGGACAAAGCTG...CTTTTTGTGTCTCATAGTTTTAGAAGCTGGGAAGGATAGAGTCAGCAAGAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR TCA 72 bp | ACTGAGACGGTTTATAATGCTATCAGATGGAGAAGATaGATTTGTGACATAATCAACAGAAAATGGCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TETVYNAIRWRR*ICDIINRKWPN Trigger: ATTTGGCCATTTTCTGTTGATTATGTCACAAATTCATCTTCTCCATCTGATAGCATTATAAACCGTCTCAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CAA 72 bp | AGAGCCAGGCAAGAGAGCAGGTACCTGACGTCCTACTaGCTCTGGAGCCTGGGGCAGATGACTGCTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RARQESRYLTSY*LWSLGQMTAGA Trigger: GGCTCCAGCAGTCATCTGCCCCAGGCTCCAGAGCAAGTAGGACGTCAGGTACCTGCTCTCTTGCCTGGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR CCA 90 bp | GGTAGCTCTGGCCGTCCTGGATCTCCCTCTGTAGACCAAGCAGGTCTGGAGATCATAGTCCTCTCCGGCTaGACCAGGAGGAGGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSSGRPGSPSVDQAGLEIIVLSG*TRRRDK Trigger: CTTGTCCCTCCTCCTGGTCCAGCCGGAGAGGACTAT...GATCTCCAGACCTGCTTGGTCTACAGAGGGAGATCCAGGACGGCCAGAGCTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGGCACAGCTCAATTACAGAGTACATGCCTGGCATGCTCAAGGCCCTGGCTCTGCGTCTGGTGCTaGAAATGCTGGGAAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGGTAQLQSTCLACSRPWLCVWC*KCWEGA Trigger: GGCACCTTCCCAGCATTTCCAGCACCAGACGCAGAG...CCAGGGCCTTGAGCATGCCAGGCATGTACTCTGTAATTGAGCTGTGCCTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR GCA 90 bp | CTGGCAGTGTCCTCCAGAGGCTGCTTGTCAATGTGTTCTTTGCACCGTCCAGACGAAATGCTGGGAAGGTaGCAGATGACCACCACGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LAVSSRGCLSMCSLHRPDEMLGR*QMTTTP Trigger: CGGCGTGGTGGTCATCTGGCACCTTCCCAGCATTTC...GTCTGGACGGTGCAAAGAACACATTGACAAGCAGCCTCTGGAGGACACTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR CCA 90 bp | CCAGAGAAAGCTGGAAGGGTGGAGTCTGGGGCTGCGGTAAATTCCTTGGTCAGGTTCTGCCCTTCTTCTTaGGTGGGGCACAGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PEKAGRVESGAAVNSLVRFCPSS*VGHRQQ Trigger: TTGCTGCCTGTGCCCCACCCAAGAAGAAGGGCAGAA...CCTGACCAAGGAATTTACCGCAGCCCCAGACTCCACCCTTCCAGCTTTCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR GCA 90 bp | TCATCAAAGGACAGGAGCAGAGAAGCAAACAGATCCACTTCTGTGGCTCGGCTGCGGGGATGTGGTTTCTaGCCTTCTTCTTGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKDRSREANRSTSVARLRGCGF*PSSWVG Trigger: CCCCACCCAAGAAGAAGGGCAGAAACCACATCCCCG...CAGCCGAGCCACAGAAGTGGATCTGTTTGCTTCTCTGCTCCTGTCCTTTGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR TCA 90 bp | GGTAGCTCTGGCCGTCCTGGATCTCCCTCTGTAGACCAAGCAGGTCTGGAGATCTTTGTGACCATTTTCTaGGTGAGTACGGTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGRPGSPSVDQAGLEIFVTIF*VSTVSS Trigger: AGAGCTCACCGTACTCACTCAGAAAATGGTCACAAA...GATCTCCAGACCTGCTTGGTCTACAGAGGGAGATCCAGGACGGCCAGAGCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR CCA 90 bp | GTGAGTACGGTGAGCTCTGCGTCTGGTGCTGGAAATGCTGGGAAGGTGCCAGATGTCCTATTTAAGCCATaGGTGCAGTGGACACCGATA | + |
|
Preference number: 4 (lower is better) Translates to: VSTVSSASGAGNAGKVPDVLFKP*VQWTPI Trigger: TATCGGTGTCCACTGCACCCATGGCTTAAATAGGAC...ATCTGGCACCTTCCCAGCATTTCCAGCACCAGACGCAGAGCTCACCGTACTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201530.2 |
||
| 3UTR CAA 72 bp | AGCCTTGGCAGTCCCTGCCCCAAGGCCGTAAGCCATTaGTCTCTTCCAAGAGGAAAGGAACACAGGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLGSPCPKAVSH*SLPRGKEHRNL Trigger: CAAATTCCTGTGTTCCTTTCCTCTTGGAAGAGACAAATGGCTTACGGCCTTGGGGCAGGGACTGCCAAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGGCACAGCTCAATTACAGAGTACATGCCTGGCATGCTCAAGGCCCTGGCCATTCCCAGTAGTATaGGTAGAAAGGTCTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGGTAQLQSTCLACSRPWPFPVV*VERSLV Trigger: TACCAGAGACCTTTCTACCCATACTACTGGGAATGG...CCAGGGCCTTGAGCATGCCAGGCATGTACTCTGTAATTGAGCTGTGCCTCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGGCACAGCTCAATTACAGAGTACATGCCTGGCATGCTCAAGGCCCTGGCATCATCTGGCCTCATaGCTTCTACATCAATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGGTAQLQSTCLACSRPWHHLAS*LLHQSN Trigger: ATTTGATTGATGTAGAAGGCATGAGGCCAGATGATG...CCAGGGCCTTGAGCATGCCAGGCATGTACTCTGTAATTGAGCTGTGCCTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CAA 72 bp | CAGAGGGTTTCTAGCCTCCTGGATAGTTCTACCCTGTaGGTGGCAGTTACCCAACTTGGCAATCAACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QRVSSLLDSSTL*VAVTQLGNQPV Trigger: TACTGGTTGATTGCCAAGTTGGGTAACTGCCACCAACAGGGTAGAACTATCCAGGAGGCTAGAAACCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CAA 72 bp | CTCCACAGTGAGTCTGAGTCTAATGACCTGGCATCTTaGAGAAGACAGAGCTGGCGATGCATCTCAGCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LHSESESNDLAS*RRQSWRCISAY Trigger: ATACGCTGAGATGCATCGCCAGCTCTGTCTTCTCAAAGATGCCAGGTCATTAGACTCAGACTCACTGTGGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR CCA 90 bp | TCTGCCGGGACTTCATTAGGGAAAAGTTCCCTCCACATGTTCATACATGAGAGACATCCGCTGCCCAACTaGGAGATAGTCTTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGTSLGKSSLHMFIHERHPLPN*EIVFPP Trigger: AGGTGGAAAGACTATCTCCCAGTTGGGCAGCGGATG...TCTCTCATGTATGAACATGTGGAGGGAACTTTTCCCTAATGAAGTCCCGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGGCACAGCTCAATTACAGAGTACATGCCTGGCATGCTCAAGGCCCTGGGGAAAAGCATTCTTCTaGCATAAGCTTTGCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGGTAQLQSTCLACSRPWGKAFF*HKLCFK Trigger: TTTGAAGCAAAGCTTATGCCAGAAGAATGCTTTTCC...CCAGGGCCTTGAGCATGCCAGGCATGTACTCTGTAATTGAGCTGTGCCTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR CCA 90 bp | CATACACGGCAGCATTCCACTCCAAGGGGAGGGGGAAGGAAAGATGTTTACATAGTCCTATTTAAGCCATaGGTGCAGTGGACACCGATA | + |
|
Preference number: 4 (lower is better) Translates to: HTRQHSTPRGGGRKDVYIVLFKP*VQWTPI Trigger: TATCGGTGTCCACTGCACCCATGGCTTAAATAGGAC...TATGTAAACATCTTTCCTTCCCCCTCCCCTTGGAGTGGAATGCTGCCGTGTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR TCA 90 bp | CTGGCAGTGTCCTCCAGAGGCTGCTTGTCAATGTGTTCTTTGCACCGTCCAGACTCAAATATCTGCAAATaGGGTAGCCAGTCCTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LAVSSRGCLSMCSLHRPDSNICK*GSQSYL Trigger: TAAATAGGACTGGCTACCTCATTTGCAGATATTTGA...GTCTGGACGGTGCAAAGAACACATTGACAAGCAGCCTCTGGAGGACACTGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR TCA 90 bp | ACCTCTGAGACTGACAATCAAGAAACATGCAGGGTGCCTTTCCATGGGAATTTCGCCCCCGGCAGCTGTTaGACAATTCAATTGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSETDNQETCRVPFHGNFAPGSC*TIQLHH Trigger: ATGATGCAATTGAATTGTTCAACAGCTGCCGGGGGC...GAAATTCCCATGGAAAGGCACCCTGCATGTTTCTTGATTGTCAGTCTCAGAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR TCA 90 bp | CCTACCTACTGCTCATCAAAGGACAGGAGCAGAGAAGCAAACAGATCCACTTCTCATTCCGGTTCTTTCTaGCATGACGTTTCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTYCSSKDRSREANRSTSHSGSF*HDVSAG Trigger: ACCTGCAGAAACGTCATGTCAGAAAGAACCGGAATG...AGAAGTGGATCTGTTTGCTTCTCTGCTCCTGTCCTTTGATGAGCAGTAGGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CAA 72 bp | GGGTGCATTCTGTACCTGTCCCAGCTTTGTCCTCTTTaGGTTCCTAACTGTCTGTTCCAGTTTCTTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: GCILYLSQLCPL*VPNCLFQFLTL Trigger: CAGTGTAAGAAACTGGAACAGACAGTTAGGAACCAAAAGAGGACAAAGCTGGGACAGGTACAGAATGCACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGCCATCTGTCCTAGGTGCACTAACATTCCGGTTCTTTCTGACATGACGGTTGAACACTGCAAATaGGGTAGCCAGTCCTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: FKAICPRCTNIPVLSDMTVEHCK*GSQSYL Trigger: TAAATAGGACTGGCTACCTCATTTGCAGTGTTCAAC...CGTCATGTCAGAAAGAACCGGAATGTTAGTGCACCTAGGACAGATGGCCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201530.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCCGGGACTTCATTAGGGAAAAGTTCCCTCCACATGTTCATACATGAGAGATTCAATTGCATCATCTaGCCTCATGCCTTCTACATC | + |
|
Preference number: 4 (lower is better) Translates to: SAGTSLGKSSLHMFIHERFNCII*PHAFYI Trigger: GATGTAGAAGGCATGAGGCCAGATGATGCAATTGAA...TCTCTCATGTATGAACATGTGGAGGGAACTTTTCCCTAATGAAGTCCCGGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CAA 72 bp | TGGATAGTTCTACCCTGTTGGTGGCAGTTACCCAACTaGGCAATCAACCAGTACCTAAAGTTTGAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WIVLPCWWQLPN*AINQYLKFEPS Trigger: AGAAGGTTCAAACTTTAGGTACTGGTTGATTGCCAAGTTGGGTAACTGCCACCAACAGGGTAGAACTATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR CCA 90 bp | CACAACAAGAAGCACTTTGAATCTGTTAATGTGATGGGTAGAGAAAAAGCCATCCACCTTTCGGGGATGTaGTTTCTGCCCTTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HNKKHFESVNVMGREKAIHLSGM*FLPFFL Trigger: CAAGAAGAAGGGCAGAAACCACATCCCCGAAAGGTG...GATGGCTTTTTCTCTACCCATCACATTAACAGATTCAAAGTGCTTCTTGTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR CCA 90 bp | TGTCCTAGGTGCACTAACATTCCGGTTCTTTCTGACATGACGTTTCTGCAGGTTGGAAAAGCATTCTTCTaGCATAAGCTTTGCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CPRCTNIPVLSDMTFLQVGKAFF*HKLCFK Trigger: TTTGAAGCAAAGCTTATGCCAGAAGAATGCTTTTCC...AACCTGCAGAAACGTCATGTCAGAAAGAACCGGAATGTTAGTGCACCTAGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201530.2 |
||
| 3UTR CAA 72 bp | AGGCGAGGATTAAGAACTAAGTCACTGGTGTTTTCTTaGACGTACACATACATACAGAATGGTGAGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRGLRTKSLVFS*TYTYIQNGEER Trigger: CCTTTCCTCACCATTCTGTATGTATGTGTACGTCAAAGAAAACACCAGTGACTTAGTTCTTAATCCTCGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CAA 72 bp | GACAGTGAAGTACCAGTCATCTACAAGAAGAAATTCTaGCTGACTCTATCCTTCCCAGCTTCTAAAACTATG | + |
|
Preference number: 4 (lower is better) Translates to: DSEVPVIYKKKF*LTLSFPASKTM Trigger: CATAGTTTTAGAAGCTGGGAAGGATAGAGTCAGCAAGAATTTCTTCTTGTAGATGACTGGTACTTCACTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS-3UTR GCA 90 bp | AAATTCTTGCTGACTCTATCCTTCCCAGCTTCTAAAACTATGAGACACAAAAAGGTTGAACAATTCAATTaGATCATCTGGCCTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KFLLTLSFPASKTMRHKKVEQFN*IIWPHA Trigger: GGCATGAGGCCAGATGATGCAATTGAATTGTTCAAC...CTTTTTGTGTCTCATAGTTTTAGAAGCTGGGAAGGATAGAGTCAGCAAGAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| 3UTR CAA 72 bp | ATAACTGATAATGGTATTTTCAAATGCTCCAAGTTTTaGTGGTATGTCAAGTCAGGAAGAGACCAGGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: ITDNGIFKCSKF*WYVKSGRDQVY Trigger: ATATACCTGGTCTCTTCCTGACTTGACATACCACAAAAACTTGGAGCATTTGAAAATACCATTATCAGTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
||
| CDS CCA 90 bp | GTCTTTCCACCTTTCGGGGATGTGGTTTCTGCCCTTCTTCTTGGGTaGGGCACAGGCAGCAAAGTCCCGGCCCCGTCCACGACCATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VFPPFGDVVSALLLG*GTGSKVPAPSTTMS Trigger: CGACATGGTCGTGGACGGGGCCGGGACTTTGCTGCCTGTGCCCCACCCAAGAAGAAGGGCAGAAACCACATCCCCGAAAGGTGGAAAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| CDS-3UTR CAA 90 bp | GGTAGCTCTGGCCGTCCTGGATCTCCCTCTGTAGACCAAGCAGGTCTGGAGATCTGCCCCCGGCAGCTGTaGAACAATTCAATTGCATCA | + |
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Preference number: 5 (lower is better) Translates to: GSSGRPGSPSVDQAGLEICPRQL*NNSIAS Trigger: TGATGCAATTGAATTGTTCAACAGCTGCCGGGGGCA...GATCTCCAGACCTGCTTGGTCTACAGAGGGAGATCCAGGACGGCCAGAGCTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| CDS TCA 90 bp | CTGCCTTTCTATGCAGTGCCCCCGGCAGCTGTTGAACACTGCAAATaGGGTAGCCAGTCCTATTTAAGCCATGGGTGCAGTGGACACCGA | + |
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Preference number: 5 (lower is better) Translates to: LPFYAVPPAAVEHCK*GSQSYLSHGCSGHR Trigger: TCGGTGTCCACTGCACCCATGGCTTAAATAGGACTGGCTACCTCATTTGCAGTGTTCAACAGCTGCCGGGGGCACTGCATAGAAAGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201530.2 |
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| CDS TCA 90 bp | AGCAGTCCACTTATTTGGCCTCGCACTCCAGAAGAATCTTCTTTGTaGATAGTCCTCTCCGGCTGGACCAGGAGGAGGGACAAGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: SSPLIWPRTPEESSL*IVLSGWTRRRDKAS Trigger: AGAGGCCTTGTCCCTCCTCCTGGTCCAGCCGGAGAGGACTATTCACAAAGAAGATTCTTCTGGAGTGCGAGGCCAAATAAGTGGACTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| CDS TCA 90 bp | GGACAAGGCCTCTCTGGTAAACACTCTGATTTTGTGACCATTTTCTaGGTGAGTACGGTGAGCTCTGCGTCTGGTGCTGGAAATGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: GQGLSGKHSDFVTIF*VSTVSSASGAGNAG Trigger: CCCAGCATTTCCAGCACCAGACGCAGAGCTCACCGTACTCACTCAGAAAATGGTCACAAAATCAGAGTGTTTACCAGAGAGGCCTTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| CDS-3UTR CAA 90 bp | TTCAAGGCCATCTGTCCTAGGTGCACTAACATTCCGGTTCTTTCTGACATGACGTGCCCCCGGCAGCTGTaGAACACTGCAAATGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: FKAICPRCTNIPVLSDMTCPRQL*NTANEV Trigger: TACCTCATTTGCAGTGTTCAACAGCTGCCGGGGGCA...CGTCATGTCAGAAAGAACCGGAATGTTAGTGCACCTAGGACAGATGGCCTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201530.2 |
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| CDS-3UTR CAA 90 bp | GTGAGTACGGTGAGCTCTGCGTCTGGTGCTGGAAATGCTGGGAAGGTGCCAGATTTTTGCAAAGGAACTTaGAAAGCAATGAAACGAGTC | + |
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Preference number: 5 (lower is better) Translates to: VSTVSSASGAGNAGKVPDFCKGT*KAMKRV Trigger: GACTCGTTTCATTGCTTTCAAAGTTCCTTTGCAAAA...ATCTGGCACCTTCCCAGCATTTCCAGCACCAGACGCAGAGCTCACCGTACTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201530.2 |
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| CDS-3UTR CAA 90 bp | ACCTCTGAGACTGACAATCAAGAAACATGCAGGGTGCCTTTCCATGGGAATTTCCAGCAGTCCACTTATTaGGCCTCGCACTCCAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: TSETDNQETCRVPFHGNFQQSTY*ASHSRR Trigger: TCTTCTGGAGTGCGAGGCCAAATAAGTGGACTGCTG...GAAATTCCCATGGAAAGGCACCCTGCATGTTTCTTGATTGTCAGTCTCAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| CDS GCA 90 bp | CTGCCTTTCTATGCAGTGCCCCCGGCAGCTGTTGAACAATTCAATTaGATCATCTGGCCTCATGCCTTCTACATCAATCAAATATCTGCA | + |
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Preference number: 5 (lower is better) Translates to: LPFYAVPPAAVEQFN*IIWPHAFYINQISA Trigger: TGCAGATATTTGATTGATGTAGAAGGCATGAGGCCAGATGATGCAATTGAATTGTTCAACAGCTGCCGGGGGCACTGCATAGAAAGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| CDS-3UTR CAA 90 bp | CACAACAAGAAGCACTTTGAATCTGTTAATGTGATGGGTAGAGAAAAAGCCATCTTTTGCAAAGGAACTTaGAAAGCAATGAAACGAGTC | + |
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Preference number: 5 (lower is better) Translates to: HNKKHFESVNVMGREKAIFCKGT*KAMKRV Trigger: GACTCGTTTCATTGCTTTCAAAGTTCCTTTGCAAAA...GATGGCTTTTTCTCTACCCATCACATTAACAGATTCAAAGTGCTTCTTGTTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| CDS GCA 72 bp | GGAGATAGTCTTTCCACCTTTCGGGGATGTGGTTTCTaGCCTTCTTCTTGGGTGGGGCACAGGCAGCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: GDSLSTFRGCGF*PSSWVGHRQQS Trigger: ACTTTGCTGCCTGTGCCCCACCCAAGAAGAAGGGCAGAAACCACATCCCCGAAAGGTGGAAAGACTATCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| CDS CCA 72 bp | AGCAATGAAACGAGTCCCAGGCATCCGCTGCCCAACTaGGAGATAGTCTTTCCACCTTTCGGGGATGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: SNETSPRHPLPN*EIVFPPFGDVV Trigger: AACCACATCCCCGAAAGGTGGAAAGACTATCTCCCAGTTGGGCAGCGGATGCCTGGGACTCGTTTCATTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| CDS TCA 72 bp | CTTATTTGGCCTCGCACTCCAGAAGAATCTTCTTTGTaGATAGTCCTCTCCGGCTGGACCAGGAGGAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: LIWPRTPEESSL*IVLSGWTRRRD Trigger: GTCCCTCCTCCTGGTCCAGCCGGAGAGGACTATTCACAAAGAAGATTCTTCTGGAGTGCGAGGCCAAATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| CDS TCA 72 bp | AGTTCTGCCTTTCTATGCAGTGCCCCCGGCAGCTGTTaGACAATTCAATTGCATCATCTGGCCTCATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: SSAFLCSAPGSC*TIQLHHLASCL Trigger: AAGGCATGAGGCCAGATGATGCAATTGAATTGTTCAACAGCTGCCGGGGGCACTGCATAGAAAGGCAGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| CDS TCA 72 bp | CTCTCTGGTAAACACTCTGATTTTGTGACCATTTTCTaGGTGAGTACGGTGAGCTCTGCGTCTGGTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LSGKHSDFVTIF*VSTVSSASGAG Trigger: TCCAGCACCAGACGCAGAGCTCACCGTACTCACTCAGAAAATGGTCACAAAATCAGAGTGTTTACCAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| CDS CAA 90 bp | AGTATGGGTAGAAAGGTCTCTGGTAACTCTCAGCAGTCCACTTATTaGGCCTCGCACTCCAGAAGAATCTTCTTTGTGAATAGTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SMGRKVSGNSQQSTY*ASHSRRIFFVNSPL Trigger: GAGAGGACTATTCACAAAGAAGATTCTTCTGGAGTGCGAGGCCAAATAAGTGGACTGCTGAGAGTTACCAGAGACCTTTCTACCCATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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| CDS CAA 72 bp | AGAAAGGTCTCTGGTAACTCTCAGCAGTCCACTTATTaGGCCTCGCACTCCAGAAGAATCTTCTTTGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: RKVSGNSQQSTY*ASHSRRIFFVN Trigger: ATTCACAAAGAAGATTCTTCTGGAGTGCGAGGCCAAATAAGTGGACTGCTGAGAGTTACCAGAGACCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032071.13 |
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