Pregenerated sensors for DUSP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024190Ensembl transcript IDs: ENSMUST00000025025.7, ENSMUST00000235532.2, ENSMUST00000236661.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTGCCCTGTTTTGTCAGAGGGACTTGATGTACCCACAATATATTaGTCCCGAATGTGCCGAGTTCAGCAAATGTCTTGCGGTCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: FCPVLSEGLDVPTIY*SRMCRVQQMSCGQV Trigger: GACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCGGGACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAACAGGGCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR GCA 90 bp | TTGTCAGAGGGACTTGATGTACCCACAATATATTGGTCCCGAATGTaGCGAGTTCAGCAAATGTCTTGCGGTCAAGTCATTGTTGTGACT | + |
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Preference number: 1 (lower is better) Translates to: LSEGLDVPTIYWSRM*RVQQMSCGQVIVVT Trigger: AGTCACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCGGGACCAATATATTGTGGGTACATCAAGTCCCTCTGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR GCA 90 bp | AACAGGCAAGCGAAGAAACTGCCTCAAACAGAGTCCTTTCTCTTCTaGCCTGTTTTGTCAGAGGGACTTGATGTACCCACAATATATTGG | + |
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Preference number: 1 (lower is better) Translates to: NRQAKKLPQTESFLF*PVLSEGLDVPTIYW Trigger: CCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAACAGGGCAGAAGAGAAAGGACTCTGTTTGAGGCAGTTTCTTCGCTTGCCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR GCA 90 bp | CTACAAACCTACACTGGCTTTGTCTGTCAGTGCCGAAAGCAAACCTaGTCTGGGTCTATTTACAAGATAGTACAGTACGCAAACACAAAA | + |
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Preference number: 1 (lower is better) Translates to: LQTYTGFVCQCRKQT*SGSIYKIVQYANTK Trigger: TTTTGTGTTTGCGTACTGTACTATCTTGTAAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACAAAGCCAGTGTAGGTTTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR CCA 90 bp | AACCTACACTGGCTTTGTCTGTCAGTGCCGAAAGCAAACCTGCTCTaGGTCTATTTACAAGATAGTACAGTACGCAAACACAAAATTGAG | + |
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Preference number: 1 (lower is better) Translates to: NLHWLCLSVPKANLL*VYLQDSTVRKHKIE Trigger: CTCAATTTTGTGTTTGCGTACTGTACTATCTTGTAAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACAAAGCCAGTGTAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTCCCGAATGTGCCGAGTTCAGCAAATGTCTTGCGGTCAAGTCATTGTTGTGCGACCCGGTGGCAAGTaGAACTCCACACCTCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: WSRMCRVQQMSCGQVIVVRPGGK*NSTPPL Trigger: AAGGGGAGGTGTGGAGTTTCACTTGCCACCGGGTCG...CACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCGGGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTCAGAGGGACTTGATGTACCCACAATATATTGGTCCCGAATGTGCCGAGCGACCCGGTGGCAAGTaGAACTCCACACCTCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: FCQRDLMYPQYIGPECAERPGGK*NSTPPL Trigger: AAGGGGAGGTGTGGAGTTTCACTTGCCACCGGGTCG...CTCGGCACATTCGGGACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR TCA 90 bp | GACTTGATGTACCCACAATATATTGGTCCCGAATGTGCCGAGTTCAGCAAATGTCGACCCGGTGGCAAGTaGAACTCCACACCTCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: DLMYPQYIGPECAEFSKCRPGGK*NSTPPL Trigger: AAGGGGAGGTGTGGAGTTTCACTTGCCACCGGGTCG...ACATTTGCTGAACTCGGCACATTCGGGACCAATATATTGTGGGTACATCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR GCA 90 bp | CCGAATGTGCCGAGTTCAGCAAATGTCTTGCGGTCAAGTCATTGTTGTGACTGCCTCTCCCAGAGTTATTaGATTGCTCCTCCCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: PNVPSSANVLRSSHCCDCLSQSY*IAPPTG Trigger: TCCTGTGGGAGGAGCAATGCAATAACTCTGGGAGAG...GCAGTCACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTTTGTCTGTCAGTGCCGAAAGCAAACCTGCTCTGGGTCTATTTACAAGACCAGAGTTATTGCATTaGTCCTCCCACAGGAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: LALSVSAESKPALGLFTRPELLH*SSHRRS Trigger: ACTCCTCCTGTGGGAGGAGCAATGCAATAACTCTGG...TCTTGTAAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACAAAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR CAA 90 bp | ACCCACAATATATTGGTCCCGAATGTGCCGAGTTCAGCAAATGTCTaGCGGTCAAGTCATTGTTGTGACTGCTTAGGAACTCAGTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: THNILVPNVPSSANV*RSSHCCDCLGTQWN Trigger: GTTCCACTGAGTTCCTAAGCAGTCACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCGGGACCAATATATTGTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR CAA 90 bp | GCGAAGAAACTGCCTCAAACAGAGTCCTTTCTCTTCTGCCCTGTTTaGTCAGAGGGACTTGATGTACCCACAATATATTGGTCCCGAATG | + |
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Preference number: 2 (lower is better) Translates to: AKKLPQTESFLFCPV*SEGLDVPTIYWSRM Trigger: CATTCGGGACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAACAGGGCAGAAGAGAAAGGACTCTGTTTGAGGCAGTTTCTTCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTCATCGGGAATGGTTAATACTGGTGGGTGTGTCAAGCATGAAGTTTCTAGACTCTCCCAGAGTTATTaGATTGCTCCTCCCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: MSSGMVNTGGCVKHEVSRLSQSY*IAPPTG Trigger: TCCTGTGGGAGGAGCAATGCAATAACTCTGGGAGAG...TCTAGAAACTTCATGCTTGACACACCCACCAGTATTAACCATTCCCGATGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR CAA 90 bp | AACATACAACTGTCGATAACTGAAAGCTACAAACCTACACTGGCTTaGTCTGTCAGTGCCGAAAGCAAACCTGCTCTGGGTCTATTTACA | + |
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Preference number: 2 (lower is better) Translates to: NIQLSITESYKPTLA*SVSAESKPALGLFT Trigger: TGTAAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACAAAGCCAGTGTAGGTTTGTAGCTTTCAGTTATCGACAGTTGTATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAACCTGCTCTGGGTCTATTTACAAGATAGTACAGTACGCAAACACAAAATTCCAGAGTTATTGCATTaGTCCTCCCACAGGAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: ANLLWVYLQDSTVRKHKIPELLH*SSHRRS Trigger: ACTCCTCCTGTGGGAGGAGCAATGCAATAACTCTGG...AATTTTGTGTTTGCGTACTGTACTATCTTGTAAATAGACCCAGAGCAGGTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTCTGGGTCTATTTACAAGATAGTACAGTACGCAAACACAAAATTGAGGTATCCAGAGTTATTGCATTaGTCCTCCCACAGGAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: CSGSIYKIVQYANTKLRYPELLH*SSHRRS Trigger: ACTCCTCCTGTGGGAGGAGCAATGCAATAACTCTGG...ATACCTCAATTTTGTGTTTGCGTACTGTACTATCTTGTAAATAGACCCAGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTTCTGCCCTGTTTTGTCAGAGGGACTTGATGTACCCACAATATATTGGTAGTCATTGTTGTGACTaGTTAGGAACTCAGTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: FSSALFCQRDLMYPQYIGSHCCD*LGTQWN Trigger: GTTCCACTGAGTTCCTAAGCAGTCACAACAATGACT...ACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAACAGGGCAGAAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTCATCGGGAATGGTTAATACTGGTGGGTGTGTCAAGCATGAAGTTTCTAGAGTTCAGCAAATGTCTTaGGGTCAAGTCATTGTTGTG | + |
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Preference number: 2 (lower is better) Translates to: MSSGMVNTGGCVKHEVSRVQQMS*GQVIVV Trigger: CACAACAATGACTTGACCGCAAGACATTTGCTGAAC...TCTAGAAACTTCATGCTTGACACACCCACCAGTATTAACCATTCCCGATGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCTATTTACAAGATAGTACAGTACGCAAACACAAAATTGAGGTATTTGGTGTCAAGTCATTGTTGTaGCTGCTTAGGAACTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: WVYLQDSTVRKHKIEVFGVKSLL*LLRNSV Trigger: CACTGAGTTCCTAAGCAGTCACAACAATGACTTGAC...ACCAAATACCTCAATTTTGTGTTTGCGTACTGTACTATCTTGTAAATAGACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAATAAAGGTAAAAACTCTCATACGCGCATGTCATCGGGAATGGTTAATACTTATTGGTCCCGAATGTaGCGAGTTCAGCAAATGTCT | + |
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Preference number: 2 (lower is better) Translates to: INKGKNSHTRMSSGMVNTYWSRM*RVQQMS Trigger: AGACATTTGCTGAACTCGGCACATTCGGGACCAATA...AGTATTAACCATTCCCGATGACATGCGCGTATGAGAGTTTTTACCTTTATTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAATAAAGGTAAAAACTCTCATACGCGCATGTCATCGGGAATGGTTAATACTGTACCCACAATATATTaGTCCCGAATGTGCCGAGTT | + |
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Preference number: 2 (lower is better) Translates to: INKGKNSHTRMSSGMVNTVPTIY*SRMCRV Trigger: AACTCGGCACATTCGGGACCAATATATTGTGGGTAC...AGTATTAACCATTCCCGATGACATGCGCGTATGAGAGTTTTTACCTTTATTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR CAA 90 bp | CGAATGTGCCGAGTTCAGCAAATGTCTTGCGGTCAAGTCATTGTTGTGACTGCTCCCAGAGTTATTGCATaGCTCCTCCCACAGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: RMCRVQQMSCGQVIVVTAPRVIA*LLPQEE Trigger: CTCCTCCTGTGGGAGGAGCAATGCAATAACTCTGGG...AGCAGTCACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR CAA 90 bp | GACTTGATGTACCCACAATATATTGGTCCCGAATGTGCCGAGTTCAGCAAATGTCCTCTCCCAGAGTTATaGCATTGCTCCTCCCACAGG | + |
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Preference number: 3 (lower is better) Translates to: DLMYPQYIGPECAEFSKCPLPEL*HCSSHR Trigger: CCTGTGGGAGGAGCAATGCAATAACTCTGGGAGAGG...ACATTTGCTGAACTCGGCACATTCGGGACCAATATATTGTGGGTACATCAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR GCA 72 bp | TCAGCAAATGTCTTGCGGTCAAGTCATTGTTGTGACTaGTTAGGAACTCAGTGGAACTCAGGAGGAGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: SANVLRSSHCCD*LGTQWNSGGVG Trigger: CCCAACTCCTCCTGAGTTCCACTGAGTTCCTAAGCAGTCACAACAATGACTTGACCGCAAGACATTTGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCTGTCAGTGCCGAAAGCAAACCTGCTCTGGGTCTATTTACAAGATAGTACATGTACCCACAATATATaGGTCCCGAATGTGCCGAGT | + |
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Preference number: 3 (lower is better) Translates to: CLSVPKANLLWVYLQDSTCTHNI*VPNVPS Trigger: ACTCGGCACATTCGGGACCAATATATTGTGGGTACA...TGTACTATCTTGTAAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR GCA 72 bp | GGACTTGATGTACCCACAATATATTGGTCCCGAATGTaGCGAGTTCAGCAAATGTCTTGCGGTCAAGTCATT | + |
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Preference number: 3 (lower is better) Translates to: GLDVPTIYWSRM*RVQQMSCGQVI Trigger: AATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCGGGACCAATATATTGTGGGTACATCAAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR GCA 72 bp | TACACTGGCTTTGTCTGTCAGTGCCGAAAGCAAACCTaGTCTGGGTCTATTTACAAGATAGTACAGTACGCA | + |
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Preference number: 3 (lower is better) Translates to: YTGFVCQCRKQT*SGSIYKIVQYA Trigger: TGCGTACTGTACTATCTTGTAAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACAAAGCCAGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR CCA 72 bp | GTTTTGTCAGAGGGACTTGATGTACCCACAATATATTaGTCCCGAATGTGCCGAGTTCAGCAAATGTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: VLSEGLDVPTIY*SRMCRVQQMSC Trigger: GCAAGACATTTGCTGAACTCGGCACATTCGGGACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR CCA 72 bp | TGGCTTTGTCTGTCAGTGCCGAAAGCAAACCTGCTCTaGGTCTATTTACAAGATAGTACAGTACGCAAACAC | + |
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Preference number: 3 (lower is better) Translates to: WLCLSVPKANLL*VYLQDSTVRKH Trigger: GTGTTTGCGTACTGTACTATCTTGTAAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACAAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTCTGGGTCTATTTACAAGATAGTACAGTACGCAAACACAAAATTGAGGTATCCTCTCCCAGAGTTATaGCATTGCTCCTCCCACAGG | + |
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Preference number: 3 (lower is better) Translates to: CSGSIYKIVQYANTKLRYPLPEL*HCSSHR Trigger: CCTGTGGGAGGAGCAATGCAATAACTCTGGGAGAGG...ATACCTCAATTTTGTGTTTGCGTACTGTACTATCTTGTAAATAGACCCAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAATAAAGGTAAAAACTCTCATACGCGCATGTCATCGGGAATGGTTAATACTCCCAGAGTTATTGCATaGCTCCTCCCACAGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: INKGKNSHTRMSSGMVNTPRVIA*LLPQEE Trigger: CTCCTCCTGTGGGAGGAGCAATGCAATAACTCTGGG...AGTATTAACCATTCCCGATGACATGCGCGTATGAGAGTTTTTACCTTTATTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGGCTTTGTCTGTCAGTGCCGAAAGCAAACCTGCTCTGGGTCTATTTACAAGTTTTGTCAGAGGGACTaGATGTACCCACAATATATT | + |
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Preference number: 3 (lower is better) Translates to: TGFVCQCRKQTCSGSIYKFCQRD*MYPQYI Trigger: AATATATTGTGGGTACATCAAGTCCCTCTGACAAAA...CTTGTAAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACAAAGCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR TCA 90 bp | GAGCCTCTCCCAGAGTTATTGCATTGCTCCTCCCACAGGAGGAGTGGCGACCCGGAAGCGCACGTTCACTaGGCCCGCGATGTGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: EPLPELLHCSSHRRSGDPEAHVH*ARDVAG Trigger: GCCGGCCACATCGCGGGCTCAGTGAACGTGCGCTTC...CGGGTCGCCACTCCTCCTGTGGGAGGAGCAATGCAATAACTCTGGGAGAGGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS-3UTR CCA 90 bp | GAGCCTCTCCCAGAGTTATTGCATTGCTCCTCCCACAGGAGGAGTGGCGACCCGGGTAAGCAAGGCAGATaGTGGCTGACCGGGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: EPLPELLHCSSHRRSGDPGKQGR*WLTGRC Trigger: GCATCTCCCGGTCAGCCACCATCTGCCTTGCTTACC...CGGGTCGCCACTCCTCCTGTGGGAGGAGCAATGCAATAACTCTGGGAGAGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR CCA 90 bp | AGTTATTGCATTGCTCCTCCCACAGGAGGAGTGGCGACCCGGTGGCAAGTGAAAGCACTGTTCGTGGGGTaGACGGGGATGGAAACAGGG | + |
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Preference number: 4 (lower is better) Translates to: SYCIAPPTGGVATRWQVKALFVG*TGMETG Trigger: CCCTGTTTCCATCCCCGTCCACCCCACGAACAGTGC...TTTCACTTGCCACCGGGTCGCCACTCCTCCTGTGGGAGGAGCAATGCAATAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR GCA 90 bp | GAGCCTCTCCCAGAGTTATTGCATTGCTCCTCCCACAGGAGGAGTGGCGACCCGTGTCCTCCACAGGGATaGTCTTGTACTGGTAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: EPLPELLHCSSHRRSGDPCPPQG*SCTGSD Trigger: GTCACTACCAGTACAAGAGCATCCCTGTGGAGGACA...CGGGTCGCCACTCCTCCTGTGGGAGGAGCAATGCAATAACTCTGGGAGAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR GCA 90 bp | AGTTATTGCATTGCTCCTCCCACAGGAGGAGTGGCGACCCGGTGGCAAGTGAAATGGCTGACCGGGAGATaGCGGCCTGGCAATGAACAA | + |
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Preference number: 4 (lower is better) Translates to: SYCIAPPTGGVATRWQVKWLTGR*RPGNEQ Trigger: TTGTTCATTGCCAGGCCGGCATCTCCCGGTCAGCCA...TTTCACTTGCCACCGGGTCGCCACTCCTCCTGTGGGAGGAGCAATGCAATAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR GCA 90 bp | CCTGTTTTGTCAGAGGGACTTGATGTACCCACAATATATTGGTCCCGAATGTGCCGTCCAGGGAGGCGCTaGGCTCGTCCAGCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: PVLSEGLDVPTIYWSRMCRPGRR*ARPAAP Trigger: TGGTGCTGCTGGACGAGCGCAGCGCCTCCCTGGACG...GCACATTCGGGACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS-3UTR TCA 90 bp | TCCCATGAGCCTCTCCCAGAGTTATTGCATTGCTCCTCCCACAGGAGGAGTGGCGTTAGGACAATTGGCTaGGACGTTGATCAAGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: SHEPLPELLHCSSHRRSGVRTIG*DVDQGG Trigger: ACCGCCTTGATCAACGTCTCAGCCAATTGTCCTAAC...GCCACTCCTCCTGTGGGAGGAGCAATGCAATAACTCTGGGAGAGGCTCATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR TCA 90 bp | ATAAGGACCAGCTCCCATGAGCCTCTCCCAGAGTTATTGCATTGCTCCTCCCACATGCCGGCCTGGCAATaGACAAACACTCTCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IRTSSHEPLPELLHCSSHMPAWQ*TNTLPP Trigger: TGGAGGGAGAGTGTTTGTTCATTGCCAGGCCGGCAT...GTGGGAGGAGCAATGCAATAACTCTGGGAGAGGCTCATGGGAGCTGGTCCTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR GCA 90 bp | AGTTATTGCATTGCTCCTCCCACAGGAGGAGTGGCGACCCGGTGGCAAGTGAAAAGGCTGGAAACCTCTTaGAGGGACAGCAGACTCAAC | + |
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Preference number: 4 (lower is better) Translates to: SYCIAPPTGGVATRWQVKRLETS*RDSRLN Trigger: GTTGAGTCTGCTGTCCCTGCAAGAGGTTTCCAGCCT...TTTCACTTGCCACCGGGTCGCCACTCCTCCTGTGGGAGGAGCAATGCAATAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235532.2 |
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| CDS-3UTR GCA 90 bp | CCGAATGTGCCGAGTTCAGCAAATGTCTTGCGGTCAAGTCATTGTTGTGACTGCTGGCTGACCGGGAGATaGCGGCCTGGCAATGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PNVPSSANVLRSSHCCDCWLTGR*RPGNEQ Trigger: TTGTTCATTGCCAGGCCGGCATCTCCCGGTCAGCCA...GCAGTCACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTTGTCTGTCAGTGCCGAAAGCAAACCTGCTCTGGGTCTATTTACAAGAGGTCAAGGACAGCCATaGCAGGGCTCCCAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LALSVSAESKPALGLFTRGQGQP*QGSQLQ Trigger: CTGAAGCTGGGAGCCCTGCCATGGCTGTCCTTGACC...TCTTGTAAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACAAAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR TCA 90 bp | TTTTGTCAGAGGGACTTGATGTACCCACAATATATTGGTCCCGAATGTGCCGAGCGATGTGGCCGGCGTTaGAAGCGAAGAAGGAGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: FCQRDLMYPQYIGPECAERCGRR*KRRRSD Trigger: GTCGCTCCTTCTTCGCTTTCAACGCCGGCCACATCG...CTCGGCACATTCGGGACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
||
| CDS-3UTR TCA 90 bp | TGGTCCCGAATGTGCCGAGTTCAGCAAATGTCTTGCGGTCAAGTCATTGTTGTGATGCCGGCCTGGCAATaGACAAACACTCTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WSRMCRVQQMSCGQVIVVMPAWQ*TNTLPP Trigger: TGGAGGGAGAGTGTTTGTTCATTGCCAGGCCGGCAT...CACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCGGGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTTTTGTCAGAGGGACTTGATGTACCCACAATATATTGGTCCCGAATGTGCTGGGGGTGGACTGTTTaGTGCACAGCTCAGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVLSEGLDVPTIYWSRMCWGWTV*CTAQGR Trigger: CCTGCCCTGAGCTGTGCAGCAAACAGTCCACCCCCA...GCACATTCGGGACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGTCATTGTTGTGACTGCTTAGGAACTCAGTGGAACTCAGGAGGAGTTGGGGGTAAGCAAGGCAGATaGTGGCTGACCGGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SSHCCDCLGTQWNSGGVGGKQGR*WLTGRC Trigger: GCATCTCCCGGTCAGCCACCATCTGCCTTGCTTACC...CCCAACTCCTCCTGAGTTCCACTGAGTTCCTAAGCAGTCACAACAATGACTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTTTTGTCAGAGGGACTTGATGTACCCACAATATATTGGTCCCGAATGTGCGCACTGTTCGTGGGGTaGACGGGGATGGAAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVLSEGLDVPTIYWSRMCALFVG*TGMETG Trigger: CCCTGTTTCCATCCCCGTCCACCCCACGAACAGTGC...GCACATTCGGGACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGCTTTGTCTGTCAGTGCCGAAAGCAAACCTGCTCTGGGTCTATTTACAAGTCAGGGCACTGTTCGTaGGGTGGACGGGGATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGFVCQCRKQTCSGSIYKSGHCS*GGRGWK Trigger: TTTCCATCCCCGTCCACCCCACGAACAGTGCCCTGA...CTTGTAAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACAAAGCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR TCA 90 bp | CGAATGTGCCGAGTTCAGCAAATGTCTTGCGGTCAAGTCATTGTTGTGACTGCTATGCCGGCCTGGCAATaGACAAACACTCTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RMCRVQQMSCGQVIVVTAMPAWQ*TNTLPP Trigger: TGGAGGGAGAGTGTTTGTTCATTGCCAGGCCGGCAT...AGCAGTCACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR GCA 90 bp | GACTTGATGTACCCACAATATATTGGTCCCGAATGTGCCGAGTTCAGCAAATGTTGGGGGTGGACTGTTTaGTGCACAGCTCAGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLMYPQYIGPECAEFSKCWGWTV*CTAQGR Trigger: CCTGCCCTGAGCTGTGCAGCAAACAGTCCACCCCCA...ACATTTGCTGAACTCGGCACATTCGGGACCAATATATTGTGGGTACATCAAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 |
||
| CDS-3UTR CCA 90 bp | GACTTGATGTACCCACAATATATTGGTCCCGAATGTGCCGAGTTCAGCAAATGTGGTCAAGGACAGCCATaGCAGGGCTCCCAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLMYPQYIGPECAEFSKCGQGQP*QGSQLQ Trigger: CTGAAGCTGGGAGCCCTGCCATGGCTGTCCTTGACC...ACATTTGCTGAACTCGGCACATTCGGGACCAATATATTGTGGGTACATCAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCAGAGGGACTTGATGTACCCACAATATATTGGTCCCGAATGTGCCGAGTCAGGGCACTGTTCGTaGGGTGGACGGGGATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FCQRDLMYPQYIGPECAESGHCS*GGRGWK Trigger: TTTCCATCCCCGTCCACCCCACGAACAGTGCCCTGA...CTCGGCACATTCGGGACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTTTTGTCAGAGGGACTTGATGTACCCACAATATATTGGTCCCGAATGTGCTCAGGGCACTGTTCGTaGGGTGGACGGGGATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PVLSEGLDVPTIYWSRMCSGHCS*GGRGWK Trigger: TTTCCATCCCCGTCCACCCCACGAACAGTGCCCTGA...GCACATTCGGGACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR TCA 90 bp | CTTGATGTACCCACAATATATTGGTCCCGAATGTGCCGAGTTCAGCAAATGTCTTGGAGAAAGAAGACTTaGGTGGAGCGCGCCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LDVPTIYWSRMCRVQQMSWRKKT*VERASR Trigger: CCGAGAGGCGCGCTCCACTCAAGTCTTCTTTCTCCA...AGACATTTGCTGAACTCGGCACATTCGGGACCAATATATTGTGGGTACATCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
||
| CDS-3UTR TCA 90 bp | CCGAATGTGCCGAGTTCAGCAAATGTCTTGCGGTCAAGTCATTGTTGTGACTGCGTTAGGACAATTGGCTaGGACGTTGATCAAGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PNVPSSANVLRSSHCCDCVRTIG*DVDQGG Trigger: ACCGCCTTGATCAACGTCTCAGCCAATTGTCCTAAC...GCAGTCACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCATCGGGAATGGTTAATACTGGTGGGTGTGTCAAGCATGAAGTTTCTAGAACTGAGCCCGCGATGTaGCCGGCGTTGAAAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MSSGMVNTGGCVKHEVSRTEPAM*PALKAK Trigger: CTTCGCTTTCAACGCCGGCCACATCGCGGGCTCAGT...TCTAGAAACTTCATGCTTGACACACCCACCAGTATTAACCATTCCCGATGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
||
| CDS-3UTR CCA 90 bp | TGGGTCTATTTACAAGATAGTACAGTACGCAAACACAAAATTGAGGTATTTGGTTATGCTCCAGGCCCATaGCGCCCTTGGCGCGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: WVYLQDSTVRKHKIEVFGYAPGP*RPWRGA Trigger: GGCGCCGCGCCAAGGGCGCCATGGGCCTGGAGCATA...ACCAAATACCTCAATTTTGTGTTTGCGTACTGTACTATCTTGTAAATAGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
||
| CDS-3UTR CCA 90 bp | ATGTCATCGGGAATGGTTAATACTGGTGGGTGTGTCAAGCATGAAGTTTCTAGAGCACTGTTCGTGGGGTaGACGGGGATGGAAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MSSGMVNTGGCVKHEVSRALFVG*TGMETG Trigger: CCCTGTTTCCATCCCCGTCCACCCCACGAACAGTGC...TCTAGAAACTTCATGCTTGACACACCCACCAGTATTAACCATTCCCGATGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCATCGGGAATGGTTAATACTGGTGGGTGTGTCAAGCATGAAGTTTCTAGAGGGTGGACTGTTTGCTaGACAGCTCAGGGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MSSGMVNTGGCVKHEVSRGWTVC*TAQGRK Trigger: CTTCCTGCCCTGAGCTGTGCAGCAAACAGTCCACCC...TCTAGAAACTTCATGCTTGACACACCCACCAGTATTAACCATTCCCGATGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 |
||
| CDS-3UTR GCA 90 bp | CCGAATGTGCCGAGTTCAGCAAATGTCTTGCGGTCAAGTCATTGTTGTGACTGCATGATACTCCGCCTCTaGTTCACAAACTCAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PNVPSSANVLRSSHCCDCMILRL*FTNSKA Trigger: GGCCTTTGAGTTTGTGAAGCAGAGGCGGAGTATCAT...GCAGTCACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR GCA 90 bp | TCAAGTCATTGTTGTGACTGCTTAGGAACTCAGTGGAACTCAGGAGGAGTTGGGATGATACTCCGCCTCTaGTTCACAAACTCAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSHCCDCLGTQWNSGGVGMILRL*FTNSKA Trigger: GGCCTTTGAGTTTGTGAAGCAGAGGCGGAGTATCAT...CCCAACTCCTCCTGAGTTCCACTGAGTTCCTAAGCAGTCACAACAATGACTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR GCA 90 bp | GCAAACCTGCTCTGGGTCTATTTACAAGATAGTACAGTACGCAAACACAAAATTGGGTGGACTGTTTGCTaGACAGCTCAGGGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ANLLWVYLQDSTVRKHKIGWTVC*TAQGRK Trigger: CTTCCTGCCCTGAGCTGTGCAGCAAACAGTCCACCC...AATTTTGTGTTTGCGTACTGTACTATCTTGTAAATAGACCCAGAGCAGGTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 |
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| CDS-3UTR GCA 90 bp | TTCTCTTCTGCCCTGTTTTGTCAGAGGGACTTGATGTACCCACAATATATTGGTAAGCGTGATAGGCACTaGCCAGGTACAGGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FSSALFCQRDLMYPQYIGKRDRH*PGTGRT Trigger: TGTCCTTCCTGTACCTGGGCAGTGCCTATCACGCTT...ACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAACAGGGCAGAAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 |
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| CDS-3UTR GCA 90 bp | ATGTCATCGGGAATGGTTAATACTGGTGGGTGTGTCAAGCATGAAGTTTCTAGAAAGCGTGATAGGCACTaGCCAGGTACAGGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: MSSGMVNTGGCVKHEVSRKRDRH*PGTGRT Trigger: TGTCCTTCCTGTACCTGGGCAGTGCCTATCACGCTT...TCTAGAAACTTCATGCTTGACACACCCACCAGTATTAACCATTCCCGATGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 |
||
| CDS-3UTR GCA 90 bp | CTTGATGTACCCACAATATATTGGTCCCGAATGTGCCGAGTTCAGCAAATGTCTTGTCCTCCACAGGGATaGTCTTGTACTGGTAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LDVPTIYWSRMCRVQQMSCPPQG*SCTGSD Trigger: GTCACTACCAGTACAAGAGCATCCCTGTGGAGGACA...AGACATTTGCTGAACTCGGCACATTCGGGACCAATATATTGTGGGTACATCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTCTATTTACAAGATAGTACAGTACGCAAACACAAAATTGAGGTATTTGGTGGTCAAGGACAGCCATaGCAGGGCTCCCAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WVYLQDSTVRKHKIEVFGGQGQP*QGSQLQ Trigger: CTGAAGCTGGGAGCCCTGCCATGGCTGTCCTTGACC...ACCAAATACCTCAATTTTGTGTTTGCGTACTGTACTATCTTGTAAATAGACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| 3UTR CAA 72 bp | ATATTGGTCCCGAATGTGCCGAGTTCAGCAAATGTCTaGCGGTCAAGTCATTGTTGTGACTGCTTAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ILVPNVPSSANV*RSSHCCDCLGT Trigger: AGTTCCTAAGCAGTCACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCGGGACCAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR CCA 90 bp | ATAAATAAAGGTAAAAACTCTCATACGCGCATGTCATCGGGAATGGTTAATACTGGTAAGCAAGGCAGATaGTGGCTGACCGGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: INKGKNSHTRMSSGMVNTGKQGR*WLTGRC Trigger: GCATCTCCCGGTCAGCCACCATCTGCCTTGCTTACC...AGTATTAACCATTCCCGATGACATGCGCGTATGAGAGTTTTTACCTTTATTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR GCA 90 bp | GCAAACCTGCTCTGGGTCTATTTACAAGATAGTACAGTACGCAAACACAAAATTTGTCCTCCACAGGGATaGTCTTGTACTGGTAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ANLLWVYLQDSTVRKHKICPPQG*SCTGSD Trigger: GTCACTACCAGTACAAGAGCATCCCTGTGGAGGACA...AATTTTGTGTTTGCGTACTGTACTATCTTGTAAATAGACCCAGAGCAGGTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTCTATTTACAAGATAGTACAGTACGCAAACACAAAATTGAGGTATTTGGTATGATACTCCGCCTCTaGTTCACAAACTCAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WVYLQDSTVRKHKIEVFGMILRL*FTNSKA Trigger: GGCCTTTGAGTTTGTGAAGCAGAGGCGGAGTATCAT...ACCAAATACCTCAATTTTGTGTTTGCGTACTGTACTATCTTGTAAATAGACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS GCA 90 bp | TGGAGCGCGCCTCTCGGCAGAGCGCGCCCGCGGCCAGGGCCAGGGTaGCGTCGCGCTTGGCGCCGTCCAGGGAGGCGCTGCGCTCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WSAPLGRARPRPGPG*RRAWRRPGRRCARP Trigger: TGGACGAGCGCAGCGCCTCCCTGGACGGCGCCAAGCGCGACGGCACCCTGGCCCTGGCCGCGGGCGCGCTCTGCCGAGAGGCGCGCTCCA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
||
| CDS CCA 90 bp | CTCGGCAGAGCGCGCCCGCGGCCAGGGCCAGGGTGCCGTCGCGCTTaGCGCCGTCCAGGGAGGCGCTGCGCTCGTCCAGCAGCACCACGG | + |
|
Preference number: 5 (lower is better) Translates to: LGRARPRPGPGCRRA*RRPGRRCARPAAPR Trigger: CCGTGGTGCTGCTGGACGAGCGCAGCGCCTCCCTGGACGGCGCCAAGCGCGACGGCACCCTGGCCCTGGCCGCGGGCGCGCTCTGCCGAG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
||
| CDS GCA 90 bp | CCAGGGCCAGGGTGCCGTCGCGCTTGGCGCCGTCCAGGGAGGCGCTaGGCTCGTCCAGCAGCACCACGGCGTGGTAGGCTCCGGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGPGCRRAWRRPGRR*ARPAAPRRGRLRPA Trigger: TGCTGGCCGGAGCCTACCACGCCGTGGTGCTGCTGGACGAGCGCAGCGCCTCCCTGGACGGCGCCAAGCGCGACGGCACCCTGGCCCTGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
||
| CDS CCA 90 bp | CGGCGTGGTAGGCTCCGGCCAGCAGGCGGCCACGCAGTTCAGCGTTaGGCACGATATGCTCCAGGCCCATGGCGCCCTTGGCGCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRGRLRPAGGHAVQR*ARYAPGPWRPWRGA Trigger: GGCGCCGCGCCAAGGGCGCCATGGGCCTGGAGCATATCGTGCCCAACGCTGAACTGCGTGGCCGCCTGCTGGCCGGAGCCTACCACGCCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
||
| CDS TCA 90 bp | CAGGAAGCCGAAAACGCTTCATATCCTCCTTGGAGAAAGAAGACTTaGGTGGAGCGCGCCTCTCGGCAGAGCGCGCCCGCGGCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QEAENASYPPWRKKT*VERASRQSAPAARA Trigger: GGCCCTGGCCGCGGGCGCGCTCTGCCGAGAGGCGCGCTCCACTCAAGTCTTCTTTCTCCAAGGAGGATATGAAGCGTTTTCGGCTTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTCTGCCCTGTTTTGTCAGAGGGACTTGATGTACCCACAATATATTGGTAGGCCCATGGCGCCCTaGGCGCGGCGCCGCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: FSSALFCQRDLMYPQYIGRPMAP*ARRRTM Trigger: CATCGTGCGGCGCCGCGCCAAGGGCGCCATGGGCCT...ACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAACAGGGCAGAAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
||
| CDS-3UTR CAA 90 bp | AGTTATTGCATTGCTCCTCCCACAGGAGGAGTGGCGACCCGGTGGCAAGTGAAACAATTGGCTGAGACGTaGATCAAGGCGGTGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SYCIAPPTGGVATRWQVKQLAET*IKAVMP Trigger: GGGCATCACCGCCTTGATCAACGTCTCAGCCAATTG...TTTCACTTGCCACCGGGTCGCCACTCCTCCTGTGGGAGGAGCAATGCAATAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS-3UTR CAA 90 bp | TCCCATGAGCCTCTCCCAGAGTTATTGCATTGCTCCTCCCACAGGAGGAGTGGCAAGGCTGGAAACCTCTaGCAGGGACAGCAGACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SHEPLPELLHCSSHRRSGKAGNL*QGQQTQ Trigger: TTGAGTCTGCTGTCCCTGCAAGAGGTTTCCAGCCTT...GCCACTCCTCCTGTGGGAGGAGCAATGCAATAACTCTGGGAGAGGCTCATGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235532.2 |
||
| CDS-3UTR CAA 90 bp | CGAATGTGCCGAGTTCAGCAAATGTCTTGCGGTCAAGTCATTGTTGTGACTGCTGCGATGTGGCCGGCGTaGAAAGCGAAGAAGGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RMCRVQQMSCGQVIVVTAAMWPA*KAKKER Trigger: TCGCTCCTTCTTCGCTTTCAACGCCGGCCACATCGC...AGCAGTCACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
||
| CDS-3UTR CAA 90 bp | TGTCTGTCAGTGCCGAAAGCAAACCTGCTCTGGGTCTATTTACAAGATAGTACAGTGGGGGTGGACTGTTaGCTGCACAGCTCAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CLSVPKANLLWVYLQDSTVGVDC*LHSSGQ Trigger: CTGCCCTGAGCTGTGCAGCAAACAGTCCACCCCCAC...TGTACTATCTTGTAAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 |
||
| CDS-3UTR CAA 90 bp | TGGTCCCGAATGTGCCGAGTTCAGCAAATGTCTTGCGGTCAAGTCATTGTTGTGCAATTGGCTGAGACGTaGATCAAGGCGGTGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WSRMCRVQQMSCGQVIVVQLAET*IKAVMP Trigger: GGGCATCACCGCCTTGATCAACGTCTCAGCCAATTG...CACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCGGGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
||
| CDS TCA 90 bp | TCATATCCTCCTTCTCGGAAAGATGGCAGACGGTGTGTAAGACAGTaGTCCCTGAAGATGATGGCAAGGCTGGAAACCTCTTGCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SYPPSRKDGRRCVRQ*SLKMMARLETSCRD Trigger: GTCCCTGCAAGAGGTTTCCAGCCTTGCCATCATCTTCAGGGATCACTGTCTTACACACCGTCTGCCATCTTTCCGAGAAGGAGGATATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235532.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGCTTTGTCTGTCAGTGCCGAAAGCAAACCTGCTCTGGGTCTATTTACAAGTTGGAGAAAGAAGACTaGAGTGGAGCGCGCCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TGFVCQCRKQTCSGSIYKLEKED*SGARLS Trigger: CGAGAGGCGCGCTCCACTCAAGTCTTCTTTCTCCAA...CTTGTAAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACAAAGCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS-3UTR CAA 90 bp | AGTTATTGCATTGCTCCTCCCACAGGAGGAGTGGCGACCCGGTGGCAAGTGAAACGCTTCATATCCTCCTaGGAGAAAGAAGACTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: SYCIAPPTGGVATRWQVKRFISS*EKEDLS Trigger: ACTCAAGTCTTCTTTCTCCAAGGAGGATATGAAGCG...TTTCACTTGCCACCGGGTCGCCACTCCTCCTGTGGGAGGAGCAATGCAATAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS-3UTR CAA 90 bp | AGTTATTGCATTGCTCCTCCCACAGGAGGAGTGGCGACCCGGTGGCAAGTGAAAAAGTGGTTAGGACAATaGGCTGAGACGTTGATCAAG | + |
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Preference number: 5 (lower is better) Translates to: SYCIAPPTGGVATRWQVKKWLGQ*AETLIK Trigger: CTTGATCAACGTCTCAGCCAATTGTCCTAACCACTT...TTTCACTTGCCACCGGGTCGCCACTCCTCCTGTGGGAGGAGCAATGCAATAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR CAA 90 bp | CCGAATGTGCCGAGTTCAGCAAATGTCTTGCGGTCAAGTCATTGTTGTGACTGCAAGTCAATAGCCTCGTaGAACCAGGAGCTGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: PNVPSSANVLRSSHCCDCKSIAS*NQELMS Trigger: AGACATCAGCTCCTGGTTCAACGAGGCTATTGACTT...GCAGTCACAACAATGACTTGACCGCAAGACATTTGCTGAACTCGGCACATTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR CAA 90 bp | TTCTCTTCTGCCCTGTTTTGTCAGAGGGACTTGATGTACCCACAATATATTGGTCAATTGGCTGAGACGTaGATCAAGGCGGTGATGCCC | + |
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Preference number: 5 (lower is better) Translates to: FSSALFCQRDLMYPQYIGQLAET*IKAVMP Trigger: GGGCATCACCGCCTTGATCAACGTCTCAGCCAATTG...ACCAATATATTGTGGGTACATCAAGTCCCTCTGACAAAACAGGGCAGAAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTTTGTCTGTCAGTGCCGAAAGCAAACCTGCTCTGGGTCTATTTACAAGAAAGTCAATAGCCTCGTaGAACCAGGAGCTGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: LALSVSAESKPALGLFTRKSIAS*NQELMS Trigger: AGACATCAGCTCCTGGTTCAACGAGGCTATTGACTT...TCTTGTAAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACAAAGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR CAA 90 bp | ATGTCATCGGGAATGGTTAATACTGGTGGGTGTGTCAAGCATGAAGTTTCTAGAAAGTGGTTAGGACAATaGGCTGAGACGTTGATCAAG | + |
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Preference number: 5 (lower is better) Translates to: MSSGMVNTGGCVKHEVSRKWLGQ*AETLIK Trigger: CTTGATCAACGTCTCAGCCAATTGTCCTAACCACTT...TCTAGAAACTTCATGCTTGACACACCCACCAGTATTAACCATTCCCGATGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR CAA 90 bp | TGCTCTGGGTCTATTTACAAGATAGTACAGTACGCAAACACAAAATTGAGGTATAAGTGGTTAGGACAATaGGCTGAGACGTTGATCAAG | + |
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Preference number: 5 (lower is better) Translates to: CSGSIYKIVQYANTKLRYKWLGQ*AETLIK Trigger: CTTGATCAACGTCTCAGCCAATTGTCCTAACCACTT...ATACCTCAATTTTGTGTTTGCGTACTGTACTATCTTGTAAATAGACCCAGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS-3UTR CAA 90 bp | TGGGTCTATTTACAAGATAGTACAGTACGCAAACACAAAATTGAGGTATTTGGTAAGTCAATAGCCTCGTaGAACCAGGAGCTGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: WVYLQDSTVRKHKIEVFGKSIAS*NQELMS Trigger: AGACATCAGCTCCTGGTTCAACGAGGCTATTGACTT...ACCAAATACCTCAATTTTGTGTTTGCGTACTGTACTATCTTGTAAATAGACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 ENSMUST00000236661.2 |
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| CDS CAA 90 bp | TCTCGGCAGAGCGCGCCCGCGGCCAGGGCCAGGGTGCCGTCGCGCTaGGCGCCGTCCAGGGAGGCGCTGCGCTCGTCCAGCAGCACCACG | + |
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Preference number: 6 (lower is better) Translates to: SRQSAPAARARVPSR*APSREALRSSSSTT Trigger: CGTGGTGCTGCTGGACGAGCGCAGCGCCTCCCTGGACGGCGCCAAGCGCGACGGCACCCTGGCCCTGGCCGCGGGCGCGCTCTGCCGAGA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS GCA 72 bp | GGGTGCCGTCGCGCTTGGCGCCGTCCAGGGAGGCGCTaGGCTCGTCCAGCAGCACCACGGCGTGGTAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GCRRAWRRPGRR*ARPAAPRRGRL Trigger: GAGCCTACCACGCCGTGGTGCTGCTGGACGAGCGCAGCGCCTCCCTGGACGGCGCCAAGCGCGACGGCACCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS CCA 72 bp | AGGCTCCGGCCAGCAGGCGGCCACGCAGTTCAGCGTTaGGCACGATATGCTCCAGGCCCATGGCGCCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RLRPAGGHAVQR*ARYAPGPWRPW Trigger: CCAAGGGCGCCATGGGCCTGGAGCATATCGTGCCCAACGCTGAACTGCGTGGCCGCCTGCTGGCCGGAGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS GCA 72 bp | AAAGCGAAGAAGGAGCGACAATCCAACAACAGGCACTaGGCGGCGCCCTCTCGCAGCAGCGCGCGCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: KAKKERQSNNRH*AAPSRSSARSP Trigger: GGGGCTGCGCGCGCTGCTGCGAGAGGGCGCCGCGCAGTGCCTGTTGTTGGATTGTCGCTCCTTCTTCGCTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS CAA 90 bp | GCAGGAAGCCGAAAACGCTTCATATCCTCCTTGGAGAAAGAAGACTaGAGTGGAGCGCGCCTCTCGGCAGAGCGCGCCCGCGGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: AGSRKRFISSLEKED*SGARLSAERARGQG Trigger: GCCCTGGCCGCGGGCGCGCTCTGCCGAGAGGCGCGCTCCACTCAAGTCTTCTTTCTCCAAGGAGGATATGAAGCGTTTTCGGCTTCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS CAA 90 bp | ATGGTGCTGAAGCGCACGTTCACTGAGCCCGCGATGTGGCCGGCGTaGAAAGCGAAGAAGGAGCGACAATCCAACAACAGGCACTGCGCG | + |
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Preference number: 6 (lower is better) Translates to: MVLKRTFTEPAMWPA*KAKKERQSNNRHCA Trigger: CGCGCAGTGCCTGTTGTTGGATTGTCGCTCCTTCTTCGCTTTCAACGCCGGCCACATCGCGGGCTCAGTGAACGTGCGCTTCAGCACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS TCA 72 bp | AGCGCACGTTCACTGAGCCCGCGATGTGGCCGGCGTTaGAAGCGAAGAAGGAGCGACAATCCAACAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: SARSLSPRCGRR*KRRRSDNPTTG Trigger: GCCTGTTGTTGGATTGTCGCTCCTTCTTCGCTTTCAACGCCGGCCACATCGCGGGCTCAGTGAACGTGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS TCA 72 bp | GAAAACGCTTCATATCCTCCTTGGAGAAAGAAGACTTaGGTGGAGCGCGCCTCTCGGCAGAGCGCGCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: ENASYPPWRKKT*VERASRQSAPA Trigger: CGCGGGCGCGCTCTGCCGAGAGGCGCGCTCCACTCAAGTCTTCTTTCTCCAAGGAGGATATGAAGCGTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS CCA 72 bp | ATGGTGCTGAAGCGCACGTTCACTGAGCCCGCGATGTaGCCGGCGTTGAAAGCGAAGAAGGAGCGACAATCC | + |
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Preference number: 6 (lower is better) Translates to: MVLKRTFTEPAM*PALKAKKERQS Trigger: GGATTGTCGCTCCTTCTTCGCTTTCAACGCCGGCCACATCGCGGGCTCAGTGAACGTGCGCTTCAGCACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS CAA 72 bp | CGAAAACGCTTCATATCCTCCTTGGAGAAAGAAGACTaGAGTGGAGCGCGCCTCTCGGCAGAGCGCGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: RKRFISSLEKED*SGARLSAERAR Trigger: GCGGGCGCGCTCTGCCGAGAGGCGCGCTCCACTCAAGTCTTCTTTCTCCAAGGAGGATATGAAGCGTTTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS CAA 90 bp | GCTGCACAGCTCAGGGCAGGAAGCCGAAAACGCTTCATATCCTCCTaGGAGAAAGAAGACTTGAGTGGAGCGCGCCTCTCGGCAGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: AAQLRAGSRKRFISS*EKEDLSGARLSAER Trigger: GCGCTCTGCCGAGAGGCGCGCTCCACTCAAGTCTTCTTTCTCCAAGGAGGATATGAAGCGTTTTCGGCTTCCTGCCCTGAGCTGTGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS CAA 72 bp | AAGCGCACGTTCACTGAGCCCGCGATGTGGCCGGCGTaGAAAGCGAAGAAGGAGCGACAATCCAACAACAGG | + |
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Preference number: 6 (lower is better) Translates to: KRTFTEPAMWPA*KAKKERQSNNR Trigger: CCTGTTGTTGGATTGTCGCTCCTTCTTCGCTTTCAACGCCGGCCACATCGCGGGCTCAGTGAACGTGCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS GCA 72 bp | GTAGAGAGGGGTACTACAGGAGCTGCATCCGGATTCTaGACTGTCAGGCACACTAGTACTCAGGGGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: VERGTTGAASGF*TVRHTSTQGEA Trigger: AGCCTCCCCCTGAGTACTAGTGTGCCTGACAGTGCAGAATCCGGATGCAGCTCCTGTAGTACCCCTCTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025025.7 ENSMUST00000235532.2 |
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| CDS CAA 72 bp | CTCAGGGCAGGAAGCCGAAAACGCTTCATATCCTCCTaGGAGAAAGAAGACTTGAGTGGAGCGCGCCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LRAGSRKRFISS*EKEDLSGARLS Trigger: CGAGAGGCGCGCTCCACTCAAGTCTTCTTTCTCCAAGGAGGATATGAAGCGTTTTCGGCTTCCTGCCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025025.7 |
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| CDS TCA 72 bp | CCTTCTCGGAAAGATGGCAGACGGTGTGTAAGACAGTaGTCCCTGAAGATGATGGCAAGGCTGGAAACCTCT | + |
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Preference number: 6 (lower is better) Translates to: PSRKDGRRCVRQ*SLKMMARLETS Trigger: AGAGGTTTCCAGCCTTGCCATCATCTTCAGGGATCACTGTCTTACACACCGTCTGCCATCTTTCCGAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235532.2 |
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| CDS CCA 72 bp | AGCCGAAAACGCTTCATATCCTCCTTCTCGGAAAGATaGCAGACGGTGTGTAAGACAGTGATCCCTGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SRKRFISSFSER*QTVCKTVIPED Trigger: ATCTTCAGGGATCACTGTCTTACACACCGTCTGCCATCTTTCCGAGAAGGAGGATATGAAGCGTTTTCGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235532.2 |
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