Pregenerated sensors for DUS4L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020648Ensembl transcript IDs: ENSMUST00000020977.4
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTATTGGATGGTCAAAACTCCGGAGTTCTTTACAACTTCTGGGTCTaGTCACAATCTACTGAATCCATGAGGACGGAGTACCGGGCGGAT | + |
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Preference number: 1 (lower is better) Translates to: LLDGQNSGVLYNFWV*SQSTESMRTEYRAD Trigger: ATCCGCCCGGTACTCCGTCCTCATGGATTCAGTAGATTGTGAGCAGACCCAGAAGTTGTAAAGAACTCCGGAGTTTTGACCATCCAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR CCA 90 bp | GTGGCCATTGTTGCTAGTTTTATGTGTATGAATGTTTTGCTTGCATaGCTGTCTGTACACATTGTGCTTAGCTGGTGCCTGAGGAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: VAIVASFMCMNVLLA*LSVHIVLSWCLRRP Trigger: AGGCCTCCTCAGGCACCAGCTAAGCACAATGTGTACAGACAGCCATGCAAGCAAAACATTCATACACATAAAACTAGCAACAATGGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR TCA 90 bp | AGCAGCGAGGTTTTAACTGGTGAGCCATCTCTACAGTCCCAGGTTTaGGTTCTTGGTTATGGAAAAGTTCCGTTTATTCTTTCAGATAAA | + |
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Preference number: 1 (lower is better) Translates to: SSEVLTGEPSLQSQV*VLGYGKVPFILSDK Trigger: TTTATCTGAAAGAATAAACGGAACTTTTCCATAACCAAGAACTCAAACCTGGGACTGTAGAGATGGCTCACCAGTTAAAACCTCGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR CCA 90 bp | CGCACACCCATAAAGATTAGAAGCAGAGGTTTTCAATATTTGATCTaGGATTATTGGATGGTCAAAACTCCGGAGTTCTTTACAACTTCT | + |
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Preference number: 1 (lower is better) Translates to: RTPIKIRSRGFQYLI*DYWMVKTPEFFTTS Trigger: AGAAGTTGTAAAGAACTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCTCTGCTTCTAATCTTTATGGGTGTGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR-3UTR CCA 90 bp | ATCCATGAGGACGGAGTACCGGGCGGATTTTTGTGGCCATTGTTGCTAGTTTTAGGCTGTAACCTCATGTaGTTCCATGTAGGTAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: IHEDGVPGGFLWPLLLVLGCNLM*FHVGKK Trigger: CTTCTTACCTACATGGAACCACATGAGGTTACAGCC...TAAAACTAGCAACAATGGCCACAAAAATCCGCCCGGTACTCCGTCCTCATGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGTTTTCAATATTTGATCTGGGATTATTGGATGGTCAAAACTCCGGAGTTATGTGCCGCCATGTCTaGCCCCAGGGATTGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: QRFSIFDLGLLDGQNSGVMCRHV*PQGLLL Trigger: CAACAGCAATCCCTGGGGCCAGACATGGCGGCACAT...AACTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR-3UTR CCA 90 bp | ATCCATGAGGACGGAGTACCGGGCGGATTTTTGTGGCCATTGTTGCTAGTTTTAAATGTTTTGCTTGCATaGCTGTCTGTACACATTGTG | + |
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Preference number: 2 (lower is better) Translates to: IHEDGVPGGFLWPLLLVLNVLLA*LSVHIV Trigger: CACAATGTGTACAGACAGCCATGCAAGCAAAACATT...TAAAACTAGCAACAATGGCCACAAAAATCCGCCCGGTACTCCGTCCTCATGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR CAA 90 bp | CGGATTTTTGTGGCCATTGTTGCTAGTTTTATGTGTATGAATGTTTaGCTTGCATGGCTGTCTGTACACATTGTGCTTAGCTGGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RIFVAIVASFMCMNV*LAWLSVHIVLSWCL Trigger: CAGGCACCAGCTAAGCACAATGTGTACAGACAGCCATGCAAGCAAAACATTCATACACATAAAACTAGCAACAATGGCCACAAAAATCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGGTTTTCAATATTTGATCTGGGATTATTGGATGGTCAAAACTCCGGAGCCGGGCGGATTTTTGTaGCCATTGTTGCTAGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: SRGFQYLIWDYWMVKTPEPGGFL*PLLLVL Trigger: TAAAACTAGCAACAATGGCCACAAAAATCCGCCCGG...CTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCTCTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR-3UTR CCA 90 bp | CCCATAAAGATTAGAAGCAGAGGTTTTCAATATTTGATCTGGGATTATTGGATGAGTTTTCTGAGTAGCTaGATAAAAGACATGTGCCGC | + |
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Preference number: 2 (lower is better) Translates to: PIKIRSRGFQYLIWDYWMSFLSS*IKDMCR Trigger: GCGGCACATGTCTTTTATCCAGCTACTCAGAAAACT...CATCCAATAATCCCAGATCAAATATTGAAAACCTCTGCTTCTAATCTTTATGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR-3UTR CCA 90 bp | CCCATAAAGATTAGAAGCAGAGGTTTTCAATATTTGATCTGGGATTATTGGATGCAGATAAAGTTTTGCTaGCCTAGAATTTCCAAACCT | + |
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Preference number: 2 (lower is better) Translates to: PIKIRSRGFQYLIWDYWMQIKFC*PRISKP Trigger: AGGTTTGGAAATTCTAGGCCAGCAAAACTTTATCTG...CATCCAATAATCCCAGATCAAATATTGAAAACCTCTGCTTCTAATCTTTATGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR GCA 72 bp | CTTGCATGGCTGTCTGTACACATTGTGCTTAGCTGGTaGCTGAGGAGGCCTGAAAAGCCTGTTGAATCCCCT | + |
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Preference number: 3 (lower is better) Translates to: LAWLSVHIVLSW*LRRPEKPVESP Trigger: AGGGGATTCAACAGGCTTTTCAGGCCTCCTCAGGCACCAGCTAAGCACAATGTGTACAGACAGCCATGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR CCA 72 bp | TTGCTTGCATGGCTGTCTGTACACATTGTGCTTAGCTaGTGCCTGAGGAGGCCTGAAAAGCCTGTTGAATCC | + |
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Preference number: 3 (lower is better) Translates to: LLAWLSVHIVLS*CLRRPEKPVES Trigger: GGATTCAACAGGCTTTTCAGGCCTCCTCAGGCACCAGCTAAGCACAATGTGTACAGACAGCCATGCAAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR TCA 72 bp | TCAGGTCCTGTAGAAGAGCAGCGAGGTTTTAACTGGTaGGCCATCTCTACAGTCCCAGGTTTGAGTTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: SGPVEEQRGFNW*AISTVPGLSSW Trigger: CCAAGAACTCAAACCTGGGACTGTAGAGATGGCTCACCAGTTAAAACCTCGCTGCTCTTCTACAGGACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR GCA 72 bp | GGTCAAAACTCCGGAGTTCTTTACAACTTCTGGGTCTaGTCACAATCTACTGAATCCATGAGGACGGAGTAC | + |
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Preference number: 3 (lower is better) Translates to: GQNSGVLYNFWV*SQSTESMRTEY Trigger: GTACTCCGTCCTCATGGATTCAGTAGATTGTGAGCAGACCCAGAAGTTGTAAAGAACTCCGGAGTTTTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR-3UTR CAA 90 bp | CCCATAAAGATTAGAAGCAGAGGTTTTCAATATTTGATCTGGGATTATTGGATGGGCCTGAAAAGCCTGTaGAATCCCCTGGAACTGGAG | + |
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Preference number: 3 (lower is better) Translates to: PIKIRSRGFQYLIWDYWMGLKSL*NPLELE Trigger: CTCCAGTTCCAGGGGATTCAACAGGCTTTTCAGGCC...CATCCAATAATCCCAGATCAAATATTGAAAACCTCTGCTTCTAATCTTTATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR-3UTR CAA 90 bp | AGCAGAGGTTTTCAATATTTGATCTGGGATTATTGGATGGTCAAAACTCCGGAGTCTACAGTCCCAGGTTaGAGTTCTTGGTTATGGAAA | + |
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Preference number: 3 (lower is better) Translates to: SRGFQYLIWDYWMVKTPESTVPG*SSWLWK Trigger: TTTCCATAACCAAGAACTCAAACCTGGGACTGTAGA...CTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCTCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR TCA 72 bp | GTTTTAACTGGTGAGCCATCTCTACAGTCCCAGGTTTaGGTTCTTGGTTATGGAAAAGTTCCGTTTATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VLTGEPSLQSQV*VLGYGKVPFIL Trigger: AAGAATAAACGGAACTTTTCCATAACCAAGAACTCAAACCTGGGACTGTAGAGATGGCTCACCAGTTAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR CCA 72 bp | AGAAGCAGAGGTTTTCAATATTTGATCTGGGATTATTaGATGGTCAAAACTCCGGAGTTCTTTACAACTTCT | + |
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Preference number: 3 (lower is better) Translates to: RSRGFQYLIWDY*MVKTPEFFTTS Trigger: AGAAGTTGTAAAGAACTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCTCTGCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR GCA 72 bp | ATGGAAAAGTTCCGTTTATTCTTTCAGATAAAGTTTTaGTGGCCTAGAATTTCCAAACCTCTTCCTTTAGTT | + |
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Preference number: 3 (lower is better) Translates to: MEKFRLFFQIKF*WPRISKPLPLV Trigger: AACTAAAGGAAGAGGTTTGGAAATTCTAGGCCAGCAAAACTTTATCTGAAAGAATAAACGGAACTTTTCCAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR CCA 72 bp | ATAAAGATTAGAAGCAGAGGTTTTCAATATTTGATCTaGGATTATTGGATGGTCAAAACTCCGGAGTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: IKIRSRGFQYLI*DYWMVKTPEFF Trigger: AAAGAACTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCTCTGCTTCTAATCTTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR GCA 90 bp | AGTAGCTGGATAAAAGACATGTGCCGCCATGTCTGGCCCCAGGGATTGCTGTTGAAGATCTATGGTTCTTaGCAGGTCATCGTGGATCCT | + |
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Preference number: 4 (lower is better) Translates to: SSWIKDMCRHVWPQGLLLKIYGS*QVIVDP Trigger: AGGATCCACGATGACCTGGCAAGAACCATAGATCTT...CAACAGCAATCCCTGGGGCCAGACATGGCGGCACATGTCTTTTATCCAGCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR TCA 90 bp | AGTAGCTGGATAAAAGACATGTGCCGCCATGTCTGGCCCCAGGGATTGCTGTTGTATCTTAATGGAAACTaGAAACCTTGGGCTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SSWIKDMCRHVWPQGLLLYLNGN*KPWAFH Trigger: GTGGAAAGCCCAAGGTTTTCAGTTTCCATTAAGATA...CAACAGCAATCCCTGGGGCCAGACATGGCGGCACATGTCTTTTATCCAGCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR TCA 90 bp | GCCGCCATGTCTGGCCCCAGGGATTGCTGTTGTACTGATGTTAAAAGCCATAGATCTCTTCTCCTGCCTTaGCGTTATCTTTTCCATCAT | + |
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Preference number: 4 (lower is better) Translates to: AAMSGPRDCCCTDVKSHRSLLLP*RYLFHH Trigger: ATGATGGAAAAGATAACGTCAAGGCAGGAGAAGAGA...TCTATGGCTTTTAACATCAGTACAACAGCAATCCCTGGGGCCAGACATGGCGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR CCA 90 bp | ACATGTGCCGCCATGTCTGGCCCCAGGGATTGCTGTTGTACTGATGTTAAAAGCCCAGATACATTTCAGTaGGGTTTCTTCATATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TCAAMSGPRDCCCTDVKSPDTFQ*GFFISS Trigger: GCTGGATATGAAGAAACCCCACTGAAATGTATCTGG...GCTTTTAACATCAGTACAACAGCAATCCCTGGGGCCAGACATGGCGGCACATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR TCA 90 bp | CAGAGGTTTTCAATATTTGATCTGGGATTATTGGATGGTCAAAACTCCGGAGTTGCCATCGCCCACCTCTaGGGGCAACCACAGTTAATA | + |
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Preference number: 4 (lower is better) Translates to: QRFSIFDLGLLDGQNSGVAIAHL*GQPQLI Trigger: TATTAACTGTGGTTGCCCTCAGAGGTGGGCGATGGC...AACTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR TCA 90 bp | AGCAGAGGTTTTCAATATTTGATCTGGGATTATTGGATGGTCAAAACTCCGGAGCAAGCTCTGGCTTGTTaGTCAAGCAAGCTCCATAAC | + |
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Preference number: 4 (lower is better) Translates to: SRGFQYLIWDYWMVKTPEQALAC*SSKLHN Trigger: GTTATGGAGCTTGCTTGATCAACAAGCCAGAGCTTG...CTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCTCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR CCA 90 bp | CAGAGGTTTTCAATATTTGATCTGGGATTATTGGATGGTCAAAACTCCGGAGTTGGCATCGTAGTGGACTaGCTGGTGTCTTTCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: QRFSIFDLGLLDGQNSGVGIVVD*LVSFFN Trigger: GTTGAAGAAAGACACCAGCCAGTCCACTACGATGCC...AACTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR TCA 90 bp | AGCAGAGGTTTTCAATATTTGATCTGGGATTATTGGATGGTCAAAACTCCGGAGTCAACTGTCCTTCCATaGACTGTAATCCAGGACACT | + |
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Preference number: 4 (lower is better) Translates to: SRGFQYLIWDYWMVKTPESTVLP*TVIQDT Trigger: AGTGTCCTGGATTACAGTTCATGGAAGGACAGTTGA...CTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR CAA 72 bp | CTGGTGAGCCATCTCTACAGTCCCAGGTTTGAGTTCTaGGTTATGGAAAAGTTCCGTTTATTCTTTCAGATA | + |
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Preference number: 4 (lower is better) Translates to: LVSHLYSPRFEF*VMEKFRLFFQI Trigger: TATCTGAAAGAATAAACGGAACTTTTCCATAACCAAGAACTCAAACCTGGGACTGTAGAGATGGCTCACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR TCA 90 bp | AGGTTTTCAATATTTGATCTGGGATTATTGGATGGTCAAAACTCCGGAGTTCTTTGTCTCACCATATCGTaGACAAGCTCTGGCTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: RFSIFDLGLLDGQNSGVLCLTIS*TSSGLL Trigger: CAACAAGCCAGAGCTTGTTCACGATATGGTGAGACA...AAGAACTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR GCA 90 bp | ATGTCTGGCCCCAGGGATTGCTGTTGTACTGATGTTAAAAGCCATAGACTTAAAAATACTCTCTTCTCCTaGCTTGACGTTATCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: MSGPRDCCCTDVKSHRLKNTLFS*LDVIFS Trigger: GGAAAAGATAACGTCAAGGCAGGAGAAGAGAGTATT...TTTAAGTCTATGGCTTTTAACATCAGTACAACAGCAATCCCTGGGGCCAGACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR CCA 90 bp | AGGTTTTCAATATTTGATCTGGGATTATTGGATGGTCAAAACTCCGGAGTTCTTATCGTGAACAAGCTCTaGCTTGTTGATCAAGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: RFSIFDLGLLDGQNSGVLIVNKL*LVDQAS Trigger: GCTTGCTTGATCAACAAGCCAGAGCTTGTTCACGAT...AAGAACTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| 3UTR CAA 72 bp | ACACCCATAAAGATTAGAAGCAGAGGTTTTCAATATTaGATCTGGGATTATTGGATGGTCAAAACTCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: TPIKIRSRGFQY*IWDYWMVKTPE Trigger: CTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCTCTGCTTCTAATCTTTATGGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR TCA 90 bp | CCCATAAAGATTAGAAGCAGAGGTTTTCAATATTTGATCTGGGATTATTGGATGTCATTAGCAGCAAACTaGACAATCAACGGGCAATCA | + |
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Preference number: 4 (lower is better) Translates to: PIKIRSRGFQYLIWDYWMSLAAN*TINGQS Trigger: TGATTGCCCGTTGATTGTTCAGTTTGCTGCTAATGA...CATCCAATAATCCCAGATCAAATATTGAAAACCTCTGCTTCTAATCTTTATGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR TCA 90 bp | AGGTTTTCAATATTTGATCTGGGATTATTGGATGGTCAAAACTCCGGAGTTCTTATGTACATCAGATGCTaGTGGAAGCACATAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: RFSIFDLGLLDGQNSGVLMYIRC*WKHIKG Trigger: TCCTTTTATGTGCTTCCATCAGCATCTGATGTACAT...AAGAACTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR CCA 90 bp | TTCTTGGTTATGGAAAAGTTCCGTTTATTCTTTCAGATAAAGTTTTGCTGGCCTTTTCTTGACATATTGTaGTTGGTAAGGAGTCACTTC | + |
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Preference number: 4 (lower is better) Translates to: FLVMEKFRLFFQIKFCWPFLDIL*LVRSHF Trigger: GAAGTGACTCCTTACCAACCACAATATGTCAAGAAA...AGGCCAGCAAAACTTTATCTGAAAGAATAAACGGAACTTTTCCATAACCAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS TCA 90 bp | GATTTCTCACTTGTCTCACCATATCGTGAACAAGCTCTGGCTTGTTaGTCAAGCAAGCTCCATAACCGTCCGCCATCGCCCACCTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: DFSLVSPYREQALAC*SSKLHNRPPSPTSE Trigger: CTCAGAGGTGGGCGATGGCGGACGGTTATGGAGCTTGCTTGATCAACAAGCCAGAGCTTGTTCACGATATGGTGAGACAAGTGAGAAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS CCA 90 bp | TTCCACCCGATTTCTCACTTGTCTCACCATATCGTGAACAAGCTCTaGCTTGTTGATCAAGCAAGCTCCATAACCGTCCGCCATCGCCCA | + |
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Preference number: 5 (lower is better) Translates to: FHPISHLSHHIVNKL*LVDQASSITVRHRP Trigger: TGGGCGATGGCGGACGGTTATGGAGCTTGCTTGATCAACAAGCCAGAGCTTGTTCACGATATGGTGAGACAAGTGAGAAATCGGGTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS GCA 90 bp | TTCTTCAACTGTCCTTCCATGAACTGTAATCCAGGACACTCCTGTTaGTTCAGCCTTCCGGCAAAGATCTATGGTTCTTGCCAGGTCATC | + |
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Preference number: 5 (lower is better) Translates to: FFNCPSMNCNPGHSC*FSLPAKIYGSCQVI Trigger: GATGACCTGGCAAGAACCATAGATCTTTGCCGGAAGGCTGAAGCAACAGGAGTGTCCTGGATTACAGTTCATGGAAGGACAGTTGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR CAA 90 bp | GAGGACGGAGTACCGGGCGGATTTTTGTGGCCATTGTTGCTAGTTTTATGTGTATTGTTAAAAGTCCTCTaGCAACCATCACACCATCTG | + |
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Preference number: 5 (lower is better) Translates to: EDGVPGGFLWPLLLVLCVLLKVL*QPSHHL Trigger: CAGATGGTGTGATGGTTGCAAGAGGACTTTTAACAA...TACACATAAAACTAGCAACAATGGCCACAAAAATCCGCCCGGTACTCCGTCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR CAA 90 bp | ATGTCTGGCCCCAGGGATTGCTGTTGTACTGATGTTAAAAGCCATAGACTTAAATGGAAACTGAAAACCTaGGGCTTTCCACCCGATTTC | + |
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Preference number: 5 (lower is better) Translates to: MSGPRDCCCTDVKSHRLKWKLKT*GFPPDF Trigger: GAAATCGGGTGGAAAGCCCAAGGTTTTCAGTTTCCA...TTTAAGTCTATGGCTTTTAACATCAGTACAACAGCAATCCCTGGGGCCAGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR CAA 90 bp | ATGTCTGGCCCCAGGGATTGCTGTTGTACTGATGTTAAAAGCCATAGACTTAAAAAAGATCTATGGTTCTaGCCAGGTCATCGTGGATCC | + |
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Preference number: 5 (lower is better) Translates to: MSGPRDCCCTDVKSHRLKKDLWF*PGHRGS Trigger: GGATCCACGATGACCTGGCAAGAACCATAGATCTTT...TTTAAGTCTATGGCTTTTAACATCAGTACAACAGCAATCCCTGGGGCCAGACAT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS TCA 90 bp | AGCAGGGCAGCATCAGATAAAAGTCTTGCATCATTAGCAGCAAACTaGACAATCAACGGGCAATCACCTTGGTTTGTGGTAAATTCACTG | + |
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Preference number: 5 (lower is better) Translates to: SRAASDKSLASLAAN*TINGQSPWFVVNSL Trigger: CAGTGAATTTACCACAAACCAAGGTGATTGCCCGTTGATTGTTCAGTTTGCTGCTAATGATGCAAGACTTTTATCTGATGCTGCCCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR CAA 90 bp | TTCTTGGTTATGGAAAAGTTCCGTTTATTCTTTCAGATAAAGTTTTGCTGGCCTTCCAGGACACTCCTGTaGCTTCAGCCTTCCGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: FLVMEKFRLFFQIKFCWPSRTLL*LQPSGK Trigger: TTTGCCGGAAGGCTGAAGCAACAGGAGTGTCCTGGA...AGGCCAGCAAAACTTTATCTGAAAGAATAAACGGAACTTTTCCATAACCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS TCA 90 bp | TTCTCCTGCCTTGACGTTATCTTTTCCATCATGTACATCAGATGCTaGTGGAAGCACATAAAAGGAGTTCCAAGTTCAAGAGAGATGTCA | + |
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Preference number: 5 (lower is better) Translates to: FSCLDVIFSIMYIRC*WKHIKGVPSSREMS Trigger: TGACATCTCTCTTGAACTTGGAACTCCTTTTATGTGCTTCCATCAGCATCTGATGTACATGATGGAAAAGATAACGTCAAGGCAGGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR CAA 90 bp | TATTTGATCTGGGATTATTGGATGGTCAAAACTCCGGAGTTCTTTACAACTTCTCTCTCTTCTCCTGCCTaGACGTTATCTTTTCCATCA | + |
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Preference number: 5 (lower is better) Translates to: YLIWDYWMVKTPEFFTTSLSSPA*TLSFPS Trigger: TGATGGAAAAGATAACGTCAAGGCAGGAGAAGAGAG...AGAAGTTGTAAAGAACTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR CAA 90 bp | AGGTTTTCAATATTTGATCTGGGATTATTGGATGGTCAAAACTCCGGAGTTCTTCTTGACATATTGTGGTaGGTAAGGAGTCACTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: RFSIFDLGLLDGQNSGVLLDILW*VRSHFS Trigger: TGAGAAGTGACTCCTTACCAACCACAATATGTCAAG...AAGAACTCCGGAGTTTTGACCATCCAATAATCCCAGATCAAATATTGAAAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS-3UTR CAA 90 bp | TTCTTGGTTATGGAAAAGTTCCGTTTATTCTTTCAGATAAAGTTTTGCTGGCCTCAGCAGCAATTATCATaGGTGTGTAACACAGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: FLVMEKFRLFFQIKFCWPQQQLS*VCNTGH Trigger: GTGACCTGTGTTACACACCAATGATAATTGCTGCTG...AGGCCAGCAAAACTTTATCTGAAAGAATAAACGGAACTTTTCCATAACCAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS TCA 72 bp | CTTGTCTCACCATATCGTGAACAAGCTCTGGCTTGTTaGTCAAGCAAGCTCCATAACCGTCCGCCATCGCCC | + |
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Preference number: 6 (lower is better) Translates to: LVSPYREQALAC*SSKLHNRPPSP Trigger: GGGCGATGGCGGACGGTTATGGAGCTTGCTTGATCAACAAGCCAGAGCTTGTTCACGATATGGTGAGACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS TCA 72 bp | TGGACTGGCTGGTGTCTTTCTTCAACTGTCCTTCCATaGACTGTAATCCAGGACACTCCTGTTGCTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: WTGWCLSSTVLP*TVIQDTPVASA Trigger: GGCTGAAGCAACAGGAGTGTCCTGGATTACAGTTCATGGAAGGACAGTTGAAGAAAGACACCAGCCAGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS GCA 72 bp | TGTCCTTCCATGAACTGTAATCCAGGACACTCCTGTTaGTTCAGCCTTCCGGCAAAGATCTATGGTTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: CPSMNCNPGHSC*FSLPAKIYGSC Trigger: GCAAGAACCATAGATCTTTGCCGGAAGGCTGAAGCAACAGGAGTGTCCTGGATTACAGTTCATGGAAGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS TCA 72 bp | CTTTCCACCCGATTTCTCACTTGTCTCACCATATCGTaGACAAGCTCTGGCTTGTTGATCAAGCAAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LSTRFLTCLTIS*TSSGLLIKQAP Trigger: TGGAGCTTGCTTGATCAACAAGCCAGAGCTTGTTCACGATATGGTGAGACAAGTGAGAAATCGGGTGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS CCA 72 bp | ATTTCTCACTTGTCTCACCATATCGTGAACAAGCTCTaGCTTGTTGATCAAGCAAGCTCCATAACCGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: ISHLSHHIVNKL*LVDQASSITVR Trigger: GCGGACGGTTATGGAGCTTGCTTGATCAACAAGCCAGAGCTTGTTCACGATATGGTGAGACAAGTGAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS TCA 72 bp | TGCCAGGTCATCGTGGATCCTTATCTTAATGGAAACTaGAAACCTTGGGCTTTCCACCCGATTTCTCACTTG | + |
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Preference number: 6 (lower is better) Translates to: CQVIVDPYLNGN*KPWAFHPISHL Trigger: CAAGTGAGAAATCGGGTGGAAAGCCCAAGGTTTTCAGTTTCCATTAAGATAAGGATCCACGATGACCTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS GCA 72 bp | TGTTGCTTCAGCCTTCCGGCAAAGATCTATGGTTCTTaGCAGGTCATCGTGGATCCTTATCTTAATGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: CCFSLPAKIYGS*QVIVDPYLNGN Trigger: GTTTCCATTAAGATAAGGATCCACGATGACCTGGCAAGAACCATAGATCTTTGCCGGAAGGCTGAAGCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS CCA 72 bp | AAGAGAGATGTCAACCCAGTCCCAGATACATTTCAGTaGGGTTTCTTCATATCCAGCAAACATAGCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: KRDVNPVPDTFQ*GFFISSKHSWV Trigger: AACCCAGCTATGTTTGCTGGATATGAAGAAACCCCACTGAAATGTATCTGGGACTGGGTTGACATCTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS TCA 72 bp | GCATCAGATAAAAGTCTTGCATCATTAGCAGCAAACTaGACAATCAACGGGCAATCACCTTGGTTTGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: ASDKSLASLAAN*TINGQSPWFVV Trigger: TACCACAAACCAAGGTGATTGCCCGTTGATTGTTCAGTTTGCTGCTAATGATGCAAGACTTTTATCTGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS GCA 72 bp | GATGTGCTTGACAAGGCATTAAATACTCTCTTCTCCTaGCTTGACGTTATCTTTTCCATCATGTACATCAGA | + |
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Preference number: 6 (lower is better) Translates to: DVLDKALNTLFS*LDVIFSIMYIR Trigger: TCTGATGTACATGATGGAAAAGATAACGTCAAGGCAGGAGAAGAGAGTATTTAATGCCTTGTCAAGCACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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| CDS TCA 72 bp | CTTGACGTTATCTTTTCCATCATGTACATCAGATGCTaGTGGAAGCACATAAAAGGAGTTCCAAGTTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: LDVIFSIMYIRC*WKHIKGVPSSR Trigger: TCTTGAACTTGGAACTCCTTTTATGTGCTTCCATCAGCATCTGATGTACATGATGGAAAAGATAACGTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020977.4 |
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