RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DUS3L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000007603

Ensembl transcript IDs: ENSMUST00000007747.10

Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GGGACAACAGTGGGCATGGGGCTCTGGGTGAGGCGGTTCAGGGCCTaGTCAGCTCGCTCAAAGCACACTTGGCGCTTCCGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GTTVGMGLWVRRFRA*SARSKHTWRFRSCC
Trigger: GCAGCAGCTGCGGAAGCGCCAAGTGTGCTTTGAGCGAGCTGAGCAGGCCCTGAACCGCCTCACCCAGAGCCCCATGCCCACTGTTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 90 bp GCGCCCCACATCGTGCAGGAAGCGGCAACGGTCTCCAAATGCACATaGGGTGGCCGGCTCCTGGAGGAAGGACGGGCAGAGCCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: APHIVQEAATVSKCT*GGRLLEEGRAEPVL
Trigger: AAGGACAGGCTCTGCCCGTCCTTCCTCCAGGAGCCGGCCACCCCATGTGCATTTGGAGACCGTTGCCGCTTCCTGCACGATGTGGGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 90 bp AGGGCCTGCTCAGCTCGCTCAAAGCACACTTGGCGCTTCCGCAGCTaGTGCTGCAGGGCCCTGTCTAAGCCATTCCGCACTGAAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RACSARSKHTWRFRS*CCRALSKPFRTEGS
Trigger: GCTCCCTTCAGTGCGGAATGGCTTAGACAGGGCCCTGCAGCAGCAGCTGCGGAAGCGCCAAGTGTGCTTTGAGCGAGCTGAGCAGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 90 bp CCACATCGTGCAGGAAGCGGCAACGGTCTCCAAATGCACATGGGGTaGCCGGCTCCTGGAGGAAGGACGGGCAGAGCCTGTCCTTGTCGT +
Preference number: 5 (lower is better)
Translates to: PHRAGSGNGLQMHMG*PAPGGRTGRACPCR
Trigger: ACGACAAGGACAGGCTCTGCCCGTCCTTCCTCCAGGAGCCGGCCACCCCATGTGCATTTGGAGACCGTTGCCGCTTCCTGCACGATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 90 bp GGGAACGCGCCCTCCAGCTGCACCCCAAAGATGTCCTCACAGGGGTaGCGCTTGAGCAAAGCCCACTCAGACATCTGTCCCTGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: GNAPSSCTPKMSSQG*RLSKAHSDICPWSR
Trigger: CCTGCTCCAGGGACAGATGTCTGAGTGGGCTTTGCTCAAGCGCCACCCCTGTGAGGACATCTTTGGGGTGCAGCTGGAGGGCGCGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 90 bp TCCCGCAGTTCGGGCAGCAGTCGGTGTGCCAGGCTCACACGCTCCTaGACACCTGTGCGCATCTTCACAGTCAGTGGGACGTCCAACACC +
Preference number: 5 (lower is better)
Translates to: SRSSGSSRCARLTRS*TPVRIFTVSGTSNT
Trigger: GGTGTTGGACGTCCCACTGACTGTGAAGATGCGCACAGGTGTCCAGGAGCGTGTGAGCCTGGCACACCGACTGCTGCCCGAACTGCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 90 bp GCCTGCTCAGCTCGCTCAAAGCACACTTGGCGCTTCCGCAGCTGCTaGTGCAGGGCCCTGTCTAAGCCATTCCGCACTGAAGGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: ACSARSKHTWRFRSC*CRALSKPFRTEGSC
Trigger: ACAGCTCCCTTCAGTGCGGAATGGCTTAGACAGGGCCCTGCAGCAGCAGCTGCGGAAGCGCCAAGTGTGCTTTGAGCGAGCTGAGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS TCA 90 bp CGCCCTCCAGCTGCACCCCAAAGATGTCCTCACAGGGGTGGCGCTTaGGCAAAGCCCACTCAGACATCTGTCCCTGGAGCAGGTTCGTAC +
Preference number: 5 (lower is better)
Translates to: RPPAAPQRCPHRGGA*AKPTQTSVPGAGSY
Trigger: GTACGAACCTGCTCCAGGGACAGATGTCTGAGTGGGCTTTGCTCAAGCGCCACCCCTGTGAGGACATCTTTGGGGTGCAGCTGGAGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS TCA 90 bp CCACGCCCTGTGTGTCGGAGCCCCAGTGTTCTAAACCGTAGTGAGTaGAGTCCCTCAGGATGTCCAGGCGCTCGGAGGACGAGATGTCCC +
Preference number: 5 (lower is better)
Translates to: PRPVCRSPSVLNRSE*SPSGCPGARRTRCP
Trigger: GGGACATCTCGTCCTCCGAGCGCCTGGACATCCTGAGGGACTTCACTCACTACGGTTTAGAACACTGGGGCTCCGACACACAGGGCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 90 bp TGCTCAGCTCGCTCAAAGCACACTTGGCGCTTCCGCAGCTGCTGCTaGAGGGCCCTGTCTAAGCCATTCCGCACTGAAGGGAGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: CSARSKHTWRFRSCC*RALSKPFRTEGSCA
Trigger: TGCACAGCTCCCTTCAGTGCGGAATGGCTTAGACAGGGCCCTGCAGCAGCAGCTGCGGAAGCGCCAAGTGTGCTTTGAGCGAGCTGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 90 bp CGGTATCTAGCTGGGCATGGCAGCTATTCTGCTTTGGGGTCGCCATaGCCACAGTGGTCTCAGGGACAACAGTGGGCATGGGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RYLAGHGSYSALGSP*PQWSQGQQWAWGSG
Trigger: CCCAGAGCCCCATGCCCACTGTTGTCCCTGAGACCACTGTGGCCATGGCGACCCCAAAGCAGAATAGCTGCCATGCCCAGCTAGATACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS TCA 90 bp GTGTCTCCAGGTAGTCACGGCCTAAGTAATAGGGTGGCCTCTCATTaGTCCTCTGTGGGGGTCGCTCGAGCAGGCCCACGGGCACATACC +
Preference number: 5 (lower is better)
Translates to: VSPGSHGLSNRVASH*SSVGVARAGPRAHT
Trigger: GGTATGTGCCCGTGGGCCTGCTCGAGCGACCCCCACAGAGGATCAATGAGAGGCCACCCTATTACTTAGGCCGTGACTACCTGGAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 90 bp TCACAGGGGTGGCGCTTGAGCAAAGCCCACTCAGACATCTGTCCCTaGAGCAGGTTCGTACACACGGCCATCTCACCGCAGGTCACATCC +
Preference number: 5 (lower is better)
Translates to: SQGWRLSKAHSDICP*SRFVHTAISPQVTS
Trigger: GGATGTGACCTGCGGTGAGATGGCCGTGTGTACGAACCTGCTCCAGGGACAGATGTCTGAGTGGGCTTTGCTCAAGCGCCACCCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 90 bp TTTGGCCCCTGGCTCAGCTGGGTCTCCTGTGGGCACTTCCTGGCATaGACCCTCCTGCTTGTCTCCATCCAGATATTCGTGGAACCGTTC +
Preference number: 5 (lower is better)
Translates to: FGPWLSWVSCGHFLA*TLLLVSIQIFVEPF
Trigger: GAACGGTTCCACGAATATCTGGATGGAGACAAGCAGGAGGGTGCATGCCAGGAAGTGCCCACAGGAGACCCAGCTGAGCCAGGGGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 90 bp AGGAGGTACTGGTCCAAGCAGCATCTCACTGATGCGAATCCAGTCTaGAGCCTGCTGGCTGGCCATCAGTGTCTCCAGGTAGTCACGGCC +
Preference number: 5 (lower is better)
Translates to: RRYWSKQHLTDANPV*SLLAGHQCLQVVTA
Trigger: GGCCGTGACTACCTGGAGACACTGATGGCCAGCCAGCAGGCTGCAGACTGGATTCGCATCAGTGAGATGCTGCTTGGACCAGTACCTCCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 90 bp CTTCCAGGCGAATTCTTTTGGCCCCTGGCTCAGCTGGGTCTCCTGTaGGCACTTCCTGGCATGCACCCTCCTGCTTGTCTCCATCCAGAT +
Preference number: 5 (lower is better)
Translates to: LPGEFFWPLAQLGLL*ALPGMHPPACLHPD
Trigger: ATCTGGATGGAGACAAGCAGGAGGGTGCATGCCAGGAAGTGCCCACAGGAGACCCAGCTGAGCCAGGGGCCAAAAGAATTCGCCTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS TCA 90 bp GCAGGAAGACGAAGCCAGGAGGTACTGGTCCAAGCAGCATCTCACTaGTGCGAATCCAGTCTGCAGCCTGCTGGCTGGCCATCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: AGRRSQEVLVQAASH*CESSLQPAGWPSVS
Trigger: AGACACTGATGGCCAGCCAGCAGGCTGCAGACTGGATTCGCATCAGTGAGATGCTGCTTGGACCAGTACCTCCTGGCTTCGTCTTCCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 90 bp CGGCCATCTCACCGCAGGTCACATCCGCGCCAAAGCGCTTGCAAATaGGGCGAAAGGGTAGGTTTCCACACGTGGTTAAAGGAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: RPSHRRSHPRQSACK*GERVGFHTWLKEPD
Trigger: ATCTGGCTCCTTTAACCACGTGTGGAAACCTACCCTTTCGCCGCATTTGCAAGCGCTTTGGCGCGGATGTGACCTGCGGTGAGATGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 90 bp AAGTCCCTCAGGATGTCCAGGCGCTCGGAGGACGAGATGTCCCAGTaGCTCTGTTCTTTGATCTCCGTGAACAGCCAGGGCTTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: KSLRMSRRSEDEMSQ*LCSLISVNSQGLSK
Trigger: CTTGCTCAAGCCCTGGCTGTTCACGGAGATCAAAGAACAGAGGCACTGGGACATCTCGTCCTCCGAGCGCCTGGACATCCTGAGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 90 bp GTCAGTGGGACGTCCAACACCTCATTCACGCCCCGCACAATCTGTTaGAACTTGGCGGAGCGATTCATGAGTGCACAGCCACCACCCTTC +
Preference number: 5 (lower is better)
Translates to: VSGTSNTSFTPRTIC*NLAERFMSAQPPPF
Trigger: GAAGGGTGGTGGCTGTGCACTCATGAATCGCTCCGCCAAGTTCCAACAGATTGTGCGGGGCGTGAATGAGGTGTTGGACGTCCCACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 90 bp TTGGCCACGGGCCCTCTTGGGCACCTGCCTTTCACGGGATTCAATTaGCACCTCTGTCTTCCCATTTTCCTGCCCATCTTCCAGGCGAAT +
Preference number: 5 (lower is better)
Translates to: LATGPLGHLPFTGFN*HLCLPIFLPIFQAN
Trigger: ATTCGCCTGGAAGATGGGCAGGAAAATGGGAAGACAGAGGTGGCAATTGAATCCCGTGAAAGGCAGGTGCCCAAGAGGGCCCGTGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 90 bp TACACACGGCCATCTCACCGCAGGTCACATCCGCGCCAAAGCGCTTaGAAATGCGGCGAAAGGGTAGGTTTCCACACGTGGTTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: YTRPSHRRSHPRQSA*KCGERVGFHTWLKE
Trigger: CTCCTTTAACCACGTGTGGAAACCTACCCTTTCGCCGCATTTGCAAGCGCTTTGGCGCGGATGTGACCTGCGGTGAGATGGCCGTGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 90 bp TTGAGCAAGGCACCACGGGCAACCATGATCCCCGCAACGCCTGTCTaGATGGCACAGTTGGCGTCCTCAAACGAAAGGATGTCCCCATTT +
Preference number: 5 (lower is better)
Translates to: LSKAPRATMIPATPV*MAQLASSNERMSPF
Trigger: AAATGGGGACATCCTTTCGTTTGAGGACGCCAACTGTGCCATGCAGACAGGCGTTGCGGGGATCATGGTTGCCCGTGGTGCCTTGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 72 bp GCGCTGTTCCCGGGAGCGGCCATGGAGCGTGACCAGTaGGACACCCCAGTCCCGCAGTTCGGGCAGCAGTCG +
Preference number: 6 (lower is better)
Translates to: ALFPGAAMERDQ*DTPVPQFGQQS
Trigger: CGACTGCTGCCCGAACTGCGGGACTGGGGTGTCGCACTGGTCACGCTCCATGGCCGCTCCCGGGAACAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 72 bp GTGGGCATGGGGCTCTGGGTGAGGCGGTTCAGGGCCTaGTCAGCTCGCTCAAAGCACACTTGGCGCTTCCGC +
Preference number: 6 (lower is better)
Translates to: VGMGLWVRRFRA*SARSKHTWRFR
Trigger: GCGGAAGCGCCAAGTGTGCTTTGAGCGAGCTGAGCAGGCCCTGAACCGCCTCACCCAGAGCCCCATGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 72 bp GACACCCCAGTCCCGCAGTTCGGGCAGCAGTCGGTGTaGCAGGCTCACACGCTCCTGGACACCTGTGCGCAT +
Preference number: 6 (lower is better)
Translates to: DTPVPQFGQQSV*QAHTLLDTCAH
Trigger: ATGCGCACAGGTGTCCAGGAGCGTGTGAGCCTGGCACACCGACTGCTGCCCGAACTGCGGGACTGGGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 72 bp ATCGTGCAGGAAGCGGCAACGGTCTCCAAATGCACATaGGGTGGCCGGCTCCTGGAGGAAGGACGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: IVQEAATVSKCT*GGRLLEEGRAE
Trigger: CTCTGCCCGTCCTTCCTCCAGGAGCCGGCCACCCCATGTGCATTTGGAGACCGTTGCCGCTTCCTGCACGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 72 bp TGGCACACTGTTCTATGTAGGGCCAGTCAGCCAGCCTaGTGTAGCGCTGTTCCCGGGAGCGGCCATGGAGCG +
Preference number: 6 (lower is better)
Translates to: WHTVLCRASQPA*CSAVPGSGHGA
Trigger: CGCTCCATGGCCGCTCCCGGGAACAGCGCTACACCAGGCTGGCTGACTGGCCCTACATAGAACAGTGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 72 bp CGCTCAAAGCACACTTGGCGCTTCCGCAGCTGCTGCTaGAGGGCCCTGTCTAAGCCATTCCGCACTGAAGGG +
Preference number: 6 (lower is better)
Translates to: RSKHTWRFRSCC*RALSKPFRTEG
Trigger: CCCTTCAGTGCGGAATGGCTTAGACAGGGCCCTGCAGCAGCAGCTGCGGAAGCGCCAAGTGTGCTTTGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 90 bp GCGCCCTCCAGCTGCACCCCAAAGATGTCCTCACAGGGGTGGCGCTaGAGCAAAGCCCACTCAGACATCTGTCCCTGGAGCAGGTTCGTA +
Preference number: 6 (lower is better)
Translates to: APSSCTPKMSSQGWR*SKAHSDICPWSRFV
Trigger: TACGAACCTGCTCCAGGGACAGATGTCTGAGTGGGCTTTGCTCAAGCGCCACCCCTGTGAGGACATCTTTGGGGTGCAGCTGGAGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 90 bp GGGCAGCCCACGTTGATGTCCACGAAGTCCACGTCAATGGTGCGGTaGAGGAGCTCGGCACATTTGGTCATGGTGTCAGGGAACGCGCCC +
Preference number: 6 (lower is better)
Translates to: GQPTLMSTKSTSMVR*RSSAHLVMVSGNAP
Trigger: GGGCGCGTTCCCTGACACCATGACCAAATGTGCCGAGCTCCTCAACCGCACCATTGACGTGGACTTCGTGGACATCAACGTGGGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS TCA 72 bp GCCCCAGGTGTGCTCCAGCAAAGCGACAGGTCATGCTaGAAGGGCACCGGCCAAAGGTTTCGAAGAGCACGC +
Preference number: 6 (lower is better)
Translates to: APGVLQQSDRSC*KGTGQRFRRAR
Trigger: GCGTGCTCTTCGAAACCTTTGGCCGGTGCCCTTTCAGCATGACCTGTCGCTTTGCTGGAGCACACCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS TCA 72 bp GGTAGTCACGGCCTAAGTAATAGGGTGGCCTCTCATTaGTCCTCTGTGGGGGTCGCTCGAGCAGGCCCACGG +
Preference number: 6 (lower is better)
Translates to: GSHGLSNRVASH*SSVGVARAGPR
Trigger: CCGTGGGCCTGCTCGAGCGACCCCCACAGAGGATCAATGAGAGGCCACCCTATTACTTAGGCCGTGACTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 72 bp GCTCGCTCAAAGCACACTTGGCGCTTCCGCAGCTGCTaGTGCAGGGCCCTGTCTAAGCCATTCCGCACTGAA +
Preference number: 6 (lower is better)
Translates to: ARSKHTWRFRSC*CRALSKPFRTE
Trigger: TTCAGTGCGGAATGGCTTAGACAGGGCCCTGCAGCAGCAGCTGCGGAAGCGCCAAGTGTGCTTTGAGCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 72 bp TCAGCTCGCTCAAAGCACACTTGGCGCTTCCGCAGCTaGTGCTGCAGGGCCCTGTCTAAGCCATTCCGCACT +
Preference number: 6 (lower is better)
Translates to: SARSKHTWRFRS*CCRALSKPFRT
Trigger: AGTGCGGAATGGCTTAGACAGGGCCCTGCAGCAGCAGCTGCGGAAGCGCCAAGTGTGCTTTGAGCGAGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 72 bp GCCCCTGGCTCAGCTGGGTCTCCTGTGGGCACTTCCTaGCATGCACCCTCCTGCTTGTCTCCATCCAGATAT +
Preference number: 6 (lower is better)
Translates to: APGSAGSPVGTS*HAPSCLSPSRY
Trigger: ATATCTGGATGGAGACAAGCAGGAGGGTGCATGCCAGGAAGTGCCCACAGGAGACCCAGCTGAGCCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 72 bp GCTGGGCATGGCAGCTATTCTGCTTTGGGGTCGCCATaGCCACAGTGGTCTCAGGGACAACAGTGGGCATGG +
Preference number: 6 (lower is better)
Translates to: AGHGSYSALGSP*PQWSQGQQWAW
Trigger: CCATGCCCACTGTTGTCCCTGAGACCACTGTGGCCATGGCGACCCCAAAGCAGAATAGCTGCCATGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 72 bp CCCTCCAGCTGCACCCCAAAGATGTCCTCACAGGGGTaGCGCTTGAGCAAAGCCCACTCAGACATCTGTCCC +
Preference number: 6 (lower is better)
Translates to: PSSCTPKMSSQG*RLSKAHSDICP
Trigger: GGGACAGATGTCTGAGTGGGCTTTGCTCAAGCGCCACCCCTGTGAGGACATCTTTGGGGTGCAGCTGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 72 bp GTAGTGTGCTGGCTTCACATGGGGCCGGCTTTTGTTTaGGCCACGGGCCCTCTTGGGCACCTGCCTTTCACG +
Preference number: 6 (lower is better)
Translates to: VVCWLHMGPAFV*ATGPLGHLPFT
Trigger: CGTGAAAGGCAGGTGCCCAAGAGGGCCCGTGGCCAAAACAAAAGCCGGCCCCATGTGAAGCCAGCACACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 72 bp TCCACGTCAATGGTGCGGTTGAGGAGCTCGGCACATTaGGTCATGGTGTCAGGGAACGCGCCCTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: STSMVRLRSSAH*VMVSGNAPSSC
Trigger: GCAGCTGGAGGGCGCGTTCCCTGACACCATGACCAAATGTGCCGAGCTCCTCAACCGCACCATTGACGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 90 bp TCCACGAAGTCCACGTCAATGGTGCGGTTGAGGAGCTCGGCACATTaGGTCATGGTGTCAGGGAACGCGCCCTCCAGCTGCACCCCAAAG +
Preference number: 6 (lower is better)
Translates to: STKSTSMVRLRSSAH*VMVSGNAPSSCTPK
Trigger: CTTTGGGGTGCAGCTGGAGGGCGCGTTCCCTGACACCATGACCAAATGTGCCGAGCTCCTCAACCGCACCATTGACGTGGACTTCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS TCA 72 bp GCTGCACCCCAAAGATGTCCTCACAGGGGTGGCGCTTaGGCAAAGCCCACTCAGACATCTGTCCCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: AAPQRCPHRGGA*AKPTQTSVPGA
Trigger: TGCTCCAGGGACAGATGTCTGAGTGGGCTTTGCTCAAGCGCCACCCCTGTGAGGACATCTTTGGGGTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS TCA 72 bp GTGTGTCGGAGCCCCAGTGTTCTAAACCGTAGTGAGTaGAGTCCCTCAGGATGTCCAGGCGCTCGGAGGACG +
Preference number: 6 (lower is better)
Translates to: VCRSPSVLNRSE*SPSGCPGARRT
Trigger: CGTCCTCCGAGCGCCTGGACATCCTGAGGGACTTCACTCACTACGGTTTAGAACACTGGGGCTCCGACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS TCA 72 bp CGAAGCCAGGAGGTACTGGTCCAAGCAGCATCTCACTaGTGCGAATCCAGTCTGCAGCCTGCTGGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: RSQEVLVQAASH*CESSLQPAGWP
Trigger: TGGCCAGCCAGCAGGCTGCAGACTGGATTCGCATCAGTGAGATGCTGCTTGGACCAGTACCTCCTGGCTTCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 72 bp CCTCCTACGGTATCTAGCTGGGCATGGCAGCTATTCTaGTTTGGGGTCGCCATGGCCACAGTGGTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: PPTVSSWAWQLF*FGVAMATVVSG
Trigger: CCCTGAGACCACTGTGGCCATGGCGACCCCAAAGCAGAATAGCTGCCATGCCCAGCTAGATACCGTAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 72 bp CCATCTCACCGCAGGTCACATCCGCGCCAAAGCGCTTaGAAATGCGGCGAAAGGGTAGGTTTCCACACGTGG +
Preference number: 6 (lower is better)
Translates to: PSHRRSHPRQSA*KCGERVGFHTW
Trigger: CCACGTGTGGAAACCTACCCTTTCGCCGCATTTGCAAGCGCTTTGGCGCGGATGTGACCTGCGGTGAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 72 bp AGGATGTCCAGGCGCTCGGAGGACGAGATGTCCCAGTaGCTCTGTTCTTTGATCTCCGTGAACAGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: RMSRRSEDEMSQ*LCSLISVNSQG
Trigger: GCCCTGGCTGTTCACGGAGATCAAAGAACAGAGGCACTGGGACATCTCGTCCTCCGAGCGCCTGGACATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 72 bp ATCTTCCAGGCGAATTCTTTTGGCCCCTGGCTCAGCTaGGTCTCCTGTGGGCACTTCCTGGCATGCACCCTC +
Preference number: 6 (lower is better)
Translates to: IFQANSFGPWLS*VSCGHFLACTL
Trigger: GAGGGTGCATGCCAGGAAGTGCCCACAGGAGACCCAGCTGAGCCAGGGGCCAAAAGAATTCGCCTGGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 72 bp TTCCTGCCCATCTTCCAGGCGAATTCTTTTGGCCCCTaGCTCAGCTGGGTCTCCTGTGGGCACTTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: FLPIFQANSFGP*LSWVSCGHFLA
Trigger: TGCCAGGAAGTGCCCACAGGAGACCCAGCTGAGCCAGGGGCCAAAAGAATTCGCCTGGAAGATGGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 72 bp TGGCGCTTGAGCAAAGCCCACTCAGACATCTGTCCCTaGAGCAGGTTCGTACACACGGCCATCTCACCGCAG +
Preference number: 6 (lower is better)
Translates to: WRLSKAHSDICP*SRFVHTAISPQ
Trigger: CTGCGGTGAGATGGCCGTGTGTACGAACCTGCTCCAGGGACAGATGTCTGAGTGGGCTTTGCTCAAGCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 72 bp GCCATCTCACCGCAGGTCACATCCGCGCCAAAGCGCTaGCAAATGCGGCGAAAGGGTAGGTTTCCACACGTG +
Preference number: 6 (lower is better)
Translates to: AISPQVTSAPKR*QMRRKGRFPHV
Trigger: CACGTGTGGAAACCTACCCTTTCGCCGCATTTGCAAGCGCTTTGGCGCGGATGTGACCTGCGGTGAGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 72 bp AGCTGCACCCCAAAGATGTCCTCACAGGGGTGGCGCTaGAGCAAAGCCCACTCAGACATCTGTCCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: SCTPKMSSQGWR*SKAHSDICPWS
Trigger: GCTCCAGGGACAGATGTCTGAGTGGGCTTTGCTCAAGCGCCACCCCTGTGAGGACATCTTTGGGGTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 90 bp ATGTCCCAGTGCCTCTGTTCTTTGATCTCCGTGAACAGCCAGGGCTaGAGCAAGGCACCACGGGCAACCATGATCCCCGCAACGCCTGTC +
Preference number: 6 (lower is better)
Translates to: MSQCLCSLISVNSQG*SKAPRATMIPATPV
Trigger: GACAGGCGTTGCGGGGATCATGGTTGCCCGTGGTGCCTTGCTCAAGCCCTGGCTGTTCACGGAGATCAAAGAACAGAGGCACTGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 90 bp GTCCTTGTCGTAGTGTGCTGGCTTCACATGGGGCCGGCTTTTGTTTaGGCCACGGGCCCTCTTGGGCACCTGCCTTTCACGGGATTCAAT +
Preference number: 6 (lower is better)
Translates to: VLVVVCWLHMGPAFV*ATGPLGHLPFTGFN
Trigger: ATTGAATCCCGTGAAAGGCAGGTGCCCAAGAGGGCCCGTGGCCAAAACAAAAGCCGGCCCCATGTGAAGCCAGCACACTACGACAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 72 bp ACGCTCCTGGACACCTGTGCGCATCTTCACAGTCAGTaGGACGTCCAACACCTCATTCACGCCCCGCACAAT +
Preference number: 6 (lower is better)
Translates to: TLLDTCAHLHSQ*DVQHLIHAPHN
Trigger: ATTGTGCGGGGCGTGAATGAGGTGTTGGACGTCCCACTGACTGTGAAGATGCGCACAGGTGTCCAGGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 72 bp CGCTCGGAGGACGAGATGTCCCAGTGCCTCTGTTCTTaGATCTCCGTGAACAGCCAGGGCTTGAGCAAGGCA +
Preference number: 6 (lower is better)
Translates to: RSEDEMSQCLCS*ISVNSQGLSKA
Trigger: TGCCTTGCTCAAGCCCTGGCTGTTCACGGAGATCAAAGAACAGAGGCACTGGGACATCTCGTCCTCCGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 90 bp TTTGGCCACGGGCCCTCTTGGGCACCTGCCTTTCACGGGATTCAATaGCCACCTCTGTCTTCCCATTTTCCTGCCCATCTTCCAGGCGAA +
Preference number: 6 (lower is better)
Translates to: FGHGPSWAPAFHGIQ*PPLSSHFPAHLPGE
Trigger: TTCGCCTGGAAGATGGGCAGGAAAATGGGAAGACAGAGGTGGCAATTGAATCCCGTGAAAGGCAGGTGCCCAAGAGGGCCCGTGGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 90 bp GTACACACGGCCATCTCACCGCAGGTCACATCCGCGCCAAAGCGCTaGCAAATGCGGCGAAAGGGTAGGTTTCCACACGTGGTTAAAGGA +
Preference number: 6 (lower is better)
Translates to: VHTAISPQVTSAPKR*QMRRKGRFPHVVKG
Trigger: TCCTTTAACCACGTGTGGAAACCTACCCTTTCGCCGCATTTGCAAGCGCTTTGGCGCGGATGTGACCTGCGGTGAGATGGCCGTGTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 90 bp AGTCAGTGGGACGTCCAACACCTCATTCACGCCCCGCACAATCTGTaGGAACTTGGCGGAGCGATTCATGAGTGCACAGCCACCACCCTT +
Preference number: 6 (lower is better)
Translates to: SQWDVQHLIHAPHNL*ELGGAIHECTATTL
Trigger: AAGGGTGGTGGCTGTGCACTCATGAATCGCTCCGCCAAGTTCCAACAGATTGTGCGGGGCGTGAATGAGGTGTTGGACGTCCCACTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS TCA 72 bp CACACGTGGTTAAAGGAGCCAGATACAGCTTTCCGCTaGTGTCTAGCCGCTTCTTCTCACAGGGCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: HTWLKEPDTAFR*CLAASSHRAAA
Trigger: GGCTGCGGCCCTGTGAGAAGAAGCGGCTAGACATCAGCGGAAAGCTGTATCTGGCTCCTTTAACCACGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 72 bp GGGTCTCCTGTGGGCACTTCCTGGCATGCACCCTCCTaGTTGTCTCCATCCAGATATTCGTGGAACCGTTCT +
Preference number: 6 (lower is better)
Translates to: GSPVGTSWHAPS*LSPSRYSWNRS
Trigger: AGAACGGTTCCACGAATATCTGGATGGAGACAAGCAGGAGGGTGCATGCCAGGAAGTGCCCACAGGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 72 bp CACCGCAGGTCACATCCGCGCCAAAGCGCTTGCAAATaGGGCGAAAGGGTAGGTTTCCACACGTGGTTAAAG +
Preference number: 6 (lower is better)
Translates to: HRRSHPRQSACK*GERVGFHTWLK
Trigger: CTTTAACCACGTGTGGAAACCTACCCTTTCGCCGCATTTGCAAGCGCTTTGGCGCGGATGTGACCTGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS GCA 72 bp TGGTCCAAGCAGCATCTCACTGATGCGAATCCAGTCTaGAGCCTGCTGGCTGGCCATCAGTGTCTCCAGGTA +
Preference number: 6 (lower is better)
Translates to: WSKQHLTDANPV*SLLAGHQCLQV
Trigger: TACCTGGAGACACTGATGGCCAGCCAGCAGGCTGCAGACTGGATTCGCATCAGTGAGATGCTGCTTGGACCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 72 bp TTCCCATTTTCCTGCCCATCTTCCAGGCGAATTCTTTaGGCCCCTGGCTCAGCTGGGTCTCCTGTGGGCACT +
Preference number: 6 (lower is better)
Translates to: FPFSCPSSRRIL*APGSAGSPVGT
Trigger: AGTGCCCACAGGAGACCCAGCTGAGCCAGGGGCCAAAAGAATTCGCCTGGAAGATGGGCAGGAAAATGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 72 bp AACACCTCATTCACGCCCCGCACAATCTGTTGGAACTaGGCGGAGCGATTCATGAGTGCACAGCCACCACCC +
Preference number: 6 (lower is better)
Translates to: NTSFTPRTICWN*AERFMSAQPPP
Trigger: GGGTGGTGGCTGTGCACTCATGAATCGCTCCGCCAAGTTCCAACAGATTGTGCGGGGCGTGAATGAGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 72 bp GACGTCCAACACCTCATTCACGCCCCGCACAATCTGTaGGAACTTGGCGGAGCGATTCATGAGTGCACAGCC +
Preference number: 6 (lower is better)
Translates to: DVQHLIHAPHNL*ELGGAIHECTA
Trigger: GGCTGTGCACTCATGAATCGCTCCGCCAAGTTCCAACAGATTGTGCGGGGCGTGAATGAGGTGTTGGACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS TCA 72 bp CCCGCACAATCTGTTGGAACTTGGCGGAGCGATTCATaGGTGCACAGCCACCACCCTTCTTGTAGACGAGGT +
Preference number: 6 (lower is better)
Translates to: PAQSVGTWRSDS*VHSHHPSCRRG
Trigger: ACCTCGTCTACAAGAAGGGTGGTGGCTGTGCACTCATGAATCGCTCCGCCAAGTTCCAACAGATTGTGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 72 bp ACGTCCAACACCTCATTCACGCCCCGCACAATCTGTTaGAACTTGGCGGAGCGATTCATGAGTGCACAGCCA +
Preference number: 6 (lower is better)
Translates to: TSNTSFTPRTIC*NLAERFMSAQP
Trigger: TGGCTGTGCACTCATGAATCGCTCCGCCAAGTTCCAACAGATTGTGCGGGGCGTGAATGAGGTGTTGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 72 bp GGGCCCTCTTGGGCACCTGCCTTTCACGGGATTCAATaGCCACCTCTGTCTTCCCATTTTCCTGCCCATCTT +
Preference number: 6 (lower is better)
Translates to: GPSWAPAFHGIQ*PPLSSHFPAHL
Trigger: AAGATGGGCAGGAAAATGGGAAGACAGAGGTGGCAATTGAATCCCGTGAAAGGCAGGTGCCCAAGAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 72 bp ACGTTGATGTCCACGAAGTCCACGTCAATGGTGCGGTaGAGGAGCTCGGCACATTTGGTCATGGTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: TLMSTKSTSMVR*RSSAHLVMVSG
Trigger: CCCTGACACCATGACCAAATGTGCCGAGCTCCTCAACCGCACCATTGACGTGGACTTCGTGGACATCAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 72 bp ACCATGATCCCCGCAACGCCTGTCTGCATGGCACAGTaGGCGTCCTCAAACGAAAGGATGTCCCCATTTCCA +
Preference number: 6 (lower is better)
Translates to: TMIPATPVCMAQ*ASSNERMSPFP
Trigger: TGGAAATGGGGACATCCTTTCGTTTGAGGACGCCAACTGTGCCATGCAGACAGGCGTTGCGGGGATCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CCA 72 bp CAAACGAAAGGATGTCCCCATTTCCAAACAGGGGCATaGGGCTGGCCACCTTGGCACACTGTTCTATGTAGG +
Preference number: 6 (lower is better)
Translates to: QTKGCPHFQTGA*GWPPWHTVLCR
Trigger: CCTACATAGAACAGTGTGCCAAGGTGGCCAGCCCCATGCCCCTGTTTGGAAATGGGGACATCCTTTCGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10
CDS CAA 72 bp TCTCCTGTGGGCACTTCCTGGCATGCACCCTCCTGCTaGTCTCCATCCAGATATTCGTGGAACCGTTCTTTG +
Preference number: 6 (lower is better)
Translates to: SPVGTSWHAPSC*SPSRYSWNRSL
Trigger: CAAAGAACGGTTCCACGAATATCTGGATGGAGACAAGCAGGAGGGTGCATGCCAGGAAGTGCCCACAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007747.10