Pregenerated sensors for DUS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031901Ensembl transcript IDs: ENSMUST00000034375.11, ENSMUST00000119736.8
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGACGAAGGCCATCCTTGAGGAAGATGGAGGGGTTCCACATGGCTaGTCGAGCCACCATCACAGAGGAGGCAGCCGTGGCTTGTCGAAA | + |
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Preference number: 1 (lower is better) Translates to: GTKAILEEDGGVPHG*SSHHHRGGSRGLSK Trigger: TTTCGACAAGCCACGGCTGCCTCCTCTGTGATGGTGGCTCGAGCAGCCATGTGGAACCCCTCCATCTTCCTCAAGGATGGCCTTCGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CCA 90 bp | TTCAAGGAGGGACTCTCCTCACCCAGCCGACCCTCAGGGAGGCCCTaGCTCCTAAGACACACAATTGCTGCAGTCTGCTCCGCCAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: FKEGLSSPSRPSGRP*LLRHTIAAVCSASF Trigger: GAAACTGGCGGAGCAGACTGCAGCAATTGTGTGTCTTAGGAGCCAGGGCCTCCCTGAGGGTCGGCTGGGTGAGGAGAGTCCCTCCTTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR GCA 90 bp | CAGCCGACCCTCAGGGAGGCCCTGGCTCCTAAGACACACAATTGCTaGAGTCTGCTCCGCCAGTTTCTTGGACTTGTCCCACAAGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: QPTLREALAPKTHNC*SLLRQFLGLVPQGG Trigger: TCCACCTTGTGGGACAAGTCCAAGAAACTGGCGGAGCAGACTGCAGCAATTGTGTGTCTTAGGAGCCAGGGCCTCCCTGAGGGTCGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR GCA 90 bp | ACCCAGCCGACCCTCAGGGAGGCCCTGGCTCCTAAGACACACAATTaGTGCAGTCTGCTCCGCCAGTTTCTTGGACTTGTCCCACAAGGT | + |
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Preference number: 1 (lower is better) Translates to: TQPTLREALAPKTHN*CSLLRQFLGLVPQG Trigger: ACCTTGTGGGACAAGTCCAAGAAACTGGCGGAGCAGACTGCAGCAATTGTGTGTCTTAGGAGCCAGGGCCTCCCTGAGGGTCGGCTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CCA 90 bp | TGCCAGAAGTATCTTCAGCTGGCTCCTCAACAGCCTCTGGAGTCTTaGCCAGGAGGTCAGCTCGCCGAGCATCGAGCTCCCGAATGGTCT | + |
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Preference number: 1 (lower is better) Translates to: CQKYLQLAPQQPLES*PGGQLAEHRAPEWS Trigger: AGACCATTCGGGAGCTCGATGCTCGGCGAGCTGACCTCCTGGCCAAGACTCCAGAGGCTGTTGAGGAGCCAGCTGAAGATACTTCTGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR GCA 90 bp | CCCTCAGGGAGGCCCTGGCTCCTAAGACACACAATTGCTGCAGTCTaGTCCGCCAGTTTCTTGGACTTGTCCCACAAGGTGGACTGGTAC | + |
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Preference number: 1 (lower is better) Translates to: PSGRPWLLRHTIAAV*SASFLDLSHKVDWY Trigger: GTACCAGTCCACCTTGTGGGACAAGTCCAAGAAACTGGCGGAGCAGACTGCAGCAATTGTGTGTCTTAGGAGCCAGGGCCTCCCTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CCA 90 bp | CCGGGTGCTGAGGTCGCTCGTCACGATTCCTCCCATGAACTGCAATaGCTGAAATGCCAGTCCTCTCTATCCGCTTCACCAAGTTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: PGAEVARHDSSHELQ*LKCQSSLSASPSSG Trigger: CCCTGAACTTGGTGAAGCGGATAGAGAGGACTGGCATTTCAGCCATTGCAGTTCATGGGAGGAATCGTGACGAGCGACCTCAGCACCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CCA 90 bp | GAGTCTTGGCCAGGAGGTCAGCTCGCCGAGCATCGAGCTCCCGAATaGTCTCCTCATAGAAGGCACCAAGGCCAAAGGCCTCACAAATTT | + |
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Preference number: 1 (lower is better) Translates to: ESWPGGQLAEHRAPE*SPHRRHQGQRPHKF Trigger: AAATTTGTGAGGCCTTTGGCCTTGGTGCCTTCTATGAGGAGACCATTCGGGAGCTCGATGCTCGGCGAGCTGACCTCCTGGCCAAGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR TCA 90 bp | GTGCTGAGGTCGCTCGTCACGATTCCTCCCATGAACTGCAATGGCTaGAATGCCAGTCCTCTCTATCCGCTTCACCAAGTTCAGGGTATC | + |
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Preference number: 1 (lower is better) Translates to: VLRSLVTIPPMNCNG*NASPLYPLHQVQGI Trigger: GATACCCTGAACTTGGTGAAGCGGATAGAGAGGACTGGCATTTCAGCCATTGCAGTTCATGGGAGGAATCGTGACGAGCGACCTCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR GCA 90 bp | GAGGTCGCTCGTCACGATTCCTCCCATGAACTGCAATGGCTGAAATaGCAGTCCTCTCTATCCGCTTCACCAAGTTCAGGGTATCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: EVARHDSSHELQWLK*QSSLSASPSSGYLP Trigger: TGGAAGATACCCTGAACTTGGTGAAGCGGATAGAGAGGACTGGCATTTCAGCCATTGCAGTTCATGGGAGGAATCGTGACGAGCGACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR GCA 90 bp | CCAGAAGATTCTCCTCACTACTGTCCAAGGTTACAAATGGCTTCTTaGATATCTCCCCAGGTAGTGCTGGCTCCTGAACTCTTGGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: PEDSPHYCPRLQMAS*ISPQVVLAPELLGP Trigger: GGGGCCCAAGAGTTCAGGAGCCAGCACTACCTGGGGAGATATGCAAGAAGCCATTTGTAACCTTGGACAGTAGTGAGGAGAATCTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CCA 90 bp | CCTCCGACACCATTCCAGCAGGCACATCTTGGGAGTGATCTGGGGTaGATATGCTCTCCGGTCAAACCTGATAGCCATTTTAATGATGCC | + |
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Preference number: 1 (lower is better) Translates to: PPTPFQQAHLGSDLG*ICSPVKPDSHFNDA Trigger: GGCATCATTAAAATGGCTATCAGGTTTGACCGGAGAGCATATCCACCCCAGATCACTCCCAAGATGTGCCTGCTGGAATGGTGTCGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CCA 90 bp | GTCAAACCTGATAGCCATTTTAATGATGCCAGAAGTATCTTCAGCTaGCTCCTCAACAGCCTCTGGAGTCTTGGCCAGGAGGTCAGCTCG | + |
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Preference number: 1 (lower is better) Translates to: VKPDSHFNDARSIFS*LLNSLWSLGQEVSS Trigger: CGAGCTGACCTCCTGGCCAAGACTCCAGAGGCTGTTGAGGAGCCAGCTGAAGATACTTCTGGCATCATTAAAATGGCTATCAGGTTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CCA 90 bp | TTCTCCCTCCGACACCATTCCAGCAGGCACATCTTGGGAGTGATCTaGGGTGGATATGCTCTCCGGTCAAACCTGATAGCCATTTTAATG | + |
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Preference number: 1 (lower is better) Translates to: FSLRHHSSRHILGVI*GGYALRSNLIAILM Trigger: CATTAAAATGGCTATCAGGTTTGACCGGAGAGCATATCCACCCCAGATCACTCCCAAGATGTGCCTGCTGGAATGGTGTCGGAGGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CCA 90 bp | AAACATGCGATCTATAGTTCGCTGAACTGTTTCATACACAGGTTGTaGCAGCTTCTCCCTCCGACACCATTCCAGCAGGCACATCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: KHAIYSSLNCFIHRL*QLLPPTPFQQAHLG Trigger: CCCAAGATGTGCCTGCTGGAATGGTGTCGGAGGGAGAAGCTGCCACAACCTGTGTATGAAACAGTTCAGCGAACTATAGATCGCATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR TCA 90 bp | TCCGCAACAGTGACAACAGAGCAAAACATGCGATCTATAGTTCGCTaGACTGTTTCATACACAGGTTGTGGCAGCTTCTCCCTCCGACAC | + |
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Preference number: 1 (lower is better) Translates to: SATVTTEQNMRSIVR*TVSYTGCGSFSLRH Trigger: GTGTCGGAGGGAGAAGCTGCCACAACCTGTGTATGAAACAGTTCAGCGAACTATAGATCGCATGTTTTGCTCTGTTGTCACTGTTGCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR GCA 90 bp | ACACCATTCCAGCAGGCACATCTTGGGAGTGATCTGGGGTGGATATaGTCTCCGGTCAAACCTGATAGCCATTTTAATGATGCCAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: TPFQQAHLGSDLGWI*SPVKPDSHFNDARS Trigger: ACTTCTGGCATCATTAAAATGGCTATCAGGTTTGACCGGAGAGCATATCCACCCCAGATCACTCCCAAGATGTGCCTGCTGGAATGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CCA 90 bp | TATTACCCTTGGGCATTTCTTGGCACTTGTTTCAGACTGATGACCTaGGCCAAGACCTCTAGGTTTGCATGTCAACGGCCAGCAAACTGT | + |
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Preference number: 1 (lower is better) Translates to: YYPWAFLGTCFRLMT*AKTSRFACQRPANC Trigger: ACAGTTTGCTGGCCGTTGACATGCAAACCTAGAGGTCTTGGCCCAGGTCATCAGTCTGAAACAAGTGCCAAGAAATGCCCAAGGGTAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| 3UTR CCA 90 bp | CCTAAAAACCTCATTTTCAAAGACACACTCAGGTCATTAGGAACTTaGATTGGCCATCAGACATATGAGAGACAGTATTACCCTTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: PKNLIFKDTLRSLGT*IGHQTYERQYYPWA Trigger: TGCCCAAGGGTAATACTGTCTCTCATATGTCTGATGGCCAATCCAAGTTCCTAATGACCTGAGTGTGTCTTTGAAAATGAGGTTTTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| 3UTR CAA 90 bp | ACTCTTGGGCCCCCAGGGTCTTGGTCAGGGGCCTCTCGCTTGCGCTaGTTCAAGGAGGGACTCTCCTCACCCAGCCGACCCTCAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TLGPPGSWSGASRLR*FKEGLSSPSRPSGR Trigger: CCTCCCTGAGGGTCGGCTGGGTGAGGAGAGTCCCTCCTTGAACAAGCGCAAGCGAGAGGCCCCTGACCAAGACCCTGGGGGCCCAAGAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CAA 90 bp | CTGATGTACTTCTGCATGACTTCCTCCAGGGGACGAAGGCCATCCTaGAGGAAGATGGAGGGGTTCCACATGGCTGCTCGAGCCACCATC | + |
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Preference number: 2 (lower is better) Translates to: LMYFCMTSSRGRRPS*RKMEGFHMAARATI Trigger: GATGGTGGCTCGAGCAGCCATGTGGAACCCCTCCATCTTCCTCAAGGATGGCCTTCGTCCCCTGGAGGAAGTCATGCAGAAGTACATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAATTTCCTGGGAAGACTGGGCAGCATGAAGCAGTCTTCCCTGGGGCGACTCGGGGTTCCACATGGCTaGTCGAGCCACCATCACAGA | + |
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Preference number: 2 (lower is better) Translates to: TNFLGRLGSMKQSSLGRLGVPHG*SSHHHR Trigger: TCTGTGATGGTGGCTCGAGCAGCCATGTGGAACCCC...GAGTCGCCCCAGGGAAGACTGCTTCATGCTGCCCAGTCTTCCCAGGAAATTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGCAGGAGTCAGCAGCCTTCCAGAAGATTCTCCTCACTACTGTCCAAGGTTGGCTCCTGAACTCTTaGGCCCCCAGGGTCTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: PEQESAAFQKILLTTVQGWLLNS*APRVLV Trigger: GACCAAGACCCTGGGGGCCCAAGAGTTCAGGAGCCA...ACCTTGGACAGTAGTGAGGAGAATCTTCTGGAAGGCTGCTGACTCCTGCTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CAA 90 bp | GGTTGTGGCAGCTTCTCCCTCCGACACCATTCCAGCAGGCACATCTaGGGAGTGATCTGGGGTGGATATGCTCTCCGGTCAAACCTGATA | + |
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Preference number: 2 (lower is better) Translates to: GCGSFSLRHHSSRHI*GVIWGGYALRSNLI Trigger: TATCAGGTTTGACCGGAGAGCATATCCACCCCAGATCACTCCCAAGATGTGCCTGCTGGAATGGTGTCGGAGGGAGAAGCTGCCACAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGCCAGAGCAGGAGTCAGCAGCCTTCCAGAAGATTCTCCTCACTACTGTCCTCCTCAACAGCCTCTaGAGTCTTGGCCAGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: CQPEQESAAFQKILLTTVLLNSL*SLGQEV Trigger: GACCTCCTGGCCAAGACTCCAGAGGCTGTTGAGGAG...GACAGTAGTGAGGAGAATCTTCTGGAAGGCTGCTGACTCCTGCTCTGGCTGACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAAGGAGGGACTCTCCTCACCCAGCCGACCCTCAGGGAGGCCCTGGCTCCTAATGTCAAGTTGGAAGTaGGGCCTAAAAACCTCATTT | + |
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Preference number: 2 (lower is better) Translates to: FKEGLSSPSRPSGRPWLLMSSWK*GLKTSF Trigger: AAATGAGGTTTTTAGGCCTCACTTCCAACTTGACAT...TAGGAGCCAGGGCCTCCCTGAGGGTCGGCTGGGTGAGGAGAGTCCCTCCTTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR CCA 90 bp | ACACAGGTTGTGGCAGCTTCTCCCTCCGACACCATTCCAGCAGGCACATCTTGGTGTTCCCGCAGCATTTaGCACAAGCAGTACTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: TQVVAASPSDTIPAGTSWCSRSI*HKQYLV Trigger: CACCAAGTACTGCTTGTGCCAAATGCTGCGGGAACA...CCAAGATGTGCCTGCTGGAATGGTGTCGGAGGGAGAAGCTGCCACAACCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCAGCCAGAGCAGGAGTCAGCAGCCTTCCAGAAGATTCTCCTCACTACTGTACAATTGCTGCAGTCTaGTCCGCCAGTTTCTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LSARAGVSSLPEDSPHYCTIAAV*SASFLD Trigger: GTCCAAGAAACTGGCGGAGCAGACTGCAGCAATTGT...ACAGTAGTGAGGAGAATCTTCTGGAAGGCTGCTGACTCCTGCTCTGGCTGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CAA 90 bp | ATGAAGCAGTCTTCCCTGGGGCGACTCCAACTGTTCCCGCAGCATTaGGCACAAGCAGTACTTGGTGTTGGTGTAGTGGTTATCATACTG | + |
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Preference number: 2 (lower is better) Translates to: MKQSSLGRLQLFPQH*AQAVLGVGVVVIIL Trigger: CAGTATGATAACCACTACACCAACACCAAGTACTGCTTGTGCCAAATGCTGCGGGAACAGTTGGAGTCGCCCCAGGGAAGACTGCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR CCA 90 bp | CTCACAAATTTCCTGGGAAGACTGGGCAGCATGAAGCAGTCTTCCCTGGGGCGACCCTTGGGCATTTCTTaGCACTTGTTTCAGACTGAT | + |
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Preference number: 2 (lower is better) Translates to: LTNFLGRLGSMKQSSLGRPLGIS*HLFQTD Trigger: ATCAGTCTGAAACAAGTGCCAAGAAATGCCCAAGGG...TCGCCCCAGGGAAGACTGCTTCATGCTGCCCAGTCTTCCCAGGAAATTTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGCCAGAGCAGGAGTCAGCAGCCTTCCAGAAGATTCTCCTCACTACTGTCACTTGTCCCACAAGGTaGACTGGTACTTTTGTTCCG | + |
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Preference number: 2 (lower is better) Translates to: CQPEQESAAFQKILLTTVTCPTR*TGTFVP Trigger: CGGAACAAAAGTACCAGTCCACCTTGTGGGACAAGT...GACAGTAGTGAGGAGAATCTTCTGGAAGGCTGCTGACTCCTGCTCTGGCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CAA 90 bp | AGAGGAGGCAGCCGTGGCTTGTCGAAAGTCTTCTATGTCCACATGTaGCTGGATATGGTCATGAGATCCTCCGTTGGCTATGACAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: RGGSRGLSKVFYVHM*LDMVMRSSVGYDRN Trigger: ATTCCTGTCATAGCCAACGGAGGATCTCATGACCATATCCAGCAACATGTGGACATAGAAGACTTTCGACAAGCCACGGCTGCCTCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR GCA 90 bp | TACCCTTGGGCATTTCTTGGCACTTGTTTCAGACTGATGACCTGGGCCAAGACCAAGACACACAATTGCTaGAGTCTGCTCCGCCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: YPWAFLGTCFRLMTWAKTKTHNC*SLLRQF Trigger: AAACTGGCGGAGCAGACTGCAGCAATTGTGTGTCTT...GGTCTTGGCCCAGGTCATCAGTCTGAAACAAGTGCCAAGAAATGCCCAAGGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR CCA 90 bp | TACCCTTGGGCATTTCTTGGCACTTGTTTCAGACTGATGACCTGGGCCAAGACCTCCCACAAGGTGGACTaGTACTTTTGTTCCGCAACA | + |
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Preference number: 2 (lower is better) Translates to: YPWAFLGTCFRLMTWAKTSHKVD*YFCSAT Trigger: TGTTGCGGAACAAAAGTACCAGTCCACCTTGTGGGA...GGTCTTGGCCCAGGTCATCAGTCTGAAACAAGTGCCAAGAAATGCCCAAGGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CAA 90 bp | GCAAAACATGCGATCTATAGTTCGCTGAACTGTTTCATACACAGGTaGTGGCAGCTTCTCCCTCCGACACCATTCCAGCAGGCACATCTT | + |
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Preference number: 2 (lower is better) Translates to: AKHAIYSSLNCFIHR*WQLLPPTPFQQAHL Trigger: AAGATGTGCCTGCTGGAATGGTGTCGGAGGGAGAAGCTGCCACAACCTGTGTATGAAACAGTTCAGCGAACTATAGATCGCATGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR CCA 90 bp | AGATTCTCCTCACTACTGTCCAAGGTTACAAATGGCTTCTTGCATATCTCCCCAGCTCCGCCAGTTTCTTaGACTTGTCCCACAAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RFSSLLSKVTNGFLHISPAPPVS*TCPTRW Trigger: CCACCTTGTGGGACAAGTCCAAGAAACTGGCGGAGC...TGGGGAGATATGCAAGAAGCCATTTGTAACCTTGGACAGTAGTGAGGAGAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR CAA 90 bp | CTCCGCCAGTTTCTTGGACTTGTCCCACAAGGTGGACTGGTACTTTaGTTCCGCAACAGTGACAACAGAGCAAAACATGCGATCTATAGT | + |
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Preference number: 2 (lower is better) Translates to: LRQFLGLVPQGGLVL*FRNSDNRAKHAIYS Trigger: ACTATAGATCGCATGTTTTGCTCTGTTGTCACTGTTGCGGAACAAAAGTACCAGTCCACCTTGTGGGACAAGTCCAAGAAACTGGCGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTTATCATACTGCACCGCATATCTGATGTACTTCTGCATGACTTCCTCCAGGATCCTCCGTTGGCTATaGCAGGAATGGAGAGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: WLSYCTAYLMYFCMTSSRILRWL*QEWRGF Trigger: AAACCCTCTCCATTCCTGTCATAGCCAACGGAGGAT...CCTGGAGGAAGTCATGCAGAAGTACATCAGATATGCGGTGCAGTATGATAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGTTACAAATGGCTTCTTGCATATCTCCCCAGGTAGTGCTGGCTCCTGAATATCTGATGTACTTCTaGATGACTTCCTCCAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: PRLQMASCISPQVVLAPEYLMYF*MTSSRG Trigger: TCCCCTGGAGGAAGTCATGCAGAAGTACATCAGATA...TTCAGGAGCCAGCACTACCTGGGGAGATATGCAAGAAGCCATTTGTAACCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR TCA 90 bp | TACCCTTGGGCATTTCTTGGCACTTGTTTCAGACTGATGACCTGGGCCAAGACCATGTCAAGTTGGAAGTaGGGCCTAAAAACCTCATTT | + |
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Preference number: 2 (lower is better) Translates to: YPWAFLGTCFRLMTWAKTMSSWK*GLKTSF Trigger: AAATGAGGTTTTTAGGCCTCACTTCCAACTTGACAT...GGTCTTGGCCCAGGTCATCAGTCTGAAACAAGTGCCAAGAAATGCCCAAGGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCAGAAGATTCTCCTCACTACTGTCCAAGGTTACAAATGGCTTCTTGCATTTCATACACAGGTTGTaGCAGCTTCTCCCTCCGACA | + |
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Preference number: 2 (lower is better) Translates to: PSRRFSSLLSKVTNGFLHFIHRL*QLLPPT Trigger: TGTCGGAGGGAGAAGCTGCCACAACCTGTGTATGAA...ATGCAAGAAGCCATTTGTAACCTTGGACAGTAGTGAGGAGAATCTTCTGGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTGGCACTTGTTTCAGACTGATGACCTGGGCCAAGACCTCTAGGTTTGCAAGTGGAATACTCTTTTaGACAGCCCATGTTGACATC | + |
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Preference number: 2 (lower is better) Translates to: FLGTCFRLMTWAKTSRFASGILF*TAHVDI Trigger: GATGTCAACATGGGCTGTCCAAAAGAGTATTCCACT...TGCAAACCTAGAGGTCTTGGCCCAGGTCATCAGTCTGAAACAAGTGCCAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR CCA 90 bp | TACTGTCCAAGGTTACAAATGGCTTCTTGCATATCTCCCCAGGTAGTGCTGGCTAGCAGTACTTGGTGTTaGTGTAGTGGTTATCATACT | + |
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Preference number: 2 (lower is better) Translates to: YCPRLQMASCISPQVVLASSTWC*CSGYHT Trigger: AGTATGATAACCACTACACCAACACCAAGTACTGCT...AGCCAGCACTACCTGGGGAGATATGCAAGAAGCCATTTGTAACCTTGGACAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAATGTCAAGTTGGAAGTGAGGCCTAAAAACCTCATTTTCAAAGACACACTCTGGCCATCAGACATATaGGAGACAGTATTACCCTTG | + |
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Preference number: 2 (lower is better) Translates to: TNVKLEVRPKNLIFKDTLWPSDI*ETVLPL Trigger: CAAGGGTAATACTGTCTCTCATATGTCTGATGGCCA...GAGTGTGTCTTTGAAAATGAGGTTTTTAGGCCTCACTTCCAACTTGACATTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAATGTCAAGTTGGAAGTGAGGCCTAAAAACCTCATTTTCAAAGACACACTCAGACAGTATTACCCTTaGGCATTTCTTGGCACTTGT | + |
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Preference number: 2 (lower is better) Translates to: TNVKLEVRPKNLIFKDTLRQYYP*AFLGTC Trigger: ACAAGTGCCAAGAAATGCCCAAGGGTAATACTGTCT...GAGTGTGTCTTTGAAAATGAGGTTTTTAGGCCTCACTTCCAACTTGACATTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| 3UTR-3UTR CCA 90 bp | GATACCAATGTCAAGTTGGAAGTGAGGCCTAAAAACCTCATTTTCAAAGACACAAGACAGTATTACCCTTaGGCATTTCTTGGCACTTGT | + |
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Preference number: 2 (lower is better) Translates to: DTNVKLEVRPKNLIFKDTRQYYP*AFLGTC Trigger: ACAAGTGCCAAGAAATGCCCAAGGGTAATACTGTCT...TGTGTCTTTGAAAATGAGGTTTTTAGGCCTCACTTCCAACTTGACATTGGTATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| 3UTR CCA 72 bp | CCAGGAGGTCAGCTCGCCGAGCATCGAGCTCCCGAATaGTCTCCTCATAGAAGGCACCAAGGCCAAAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PGGQLAEHRAPE*SPHRRHQGQRP Trigger: AGGCCTTTGGCCTTGGTGCCTTCTATGAGGAGACCATTCGGGAGCTCGATGCTCGGCGAGCTGACCTCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR CCA 72 bp | TATCTTCAGCTGGCTCCTCAACAGCCTCTGGAGTCTTaGCCAGGAGGTCAGCTCGCCGAGCATCGAGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: YLQLAPQQPLES*PGGQLAEHRAP Trigger: GGGAGCTCGATGCTCGGCGAGCTGACCTCCTGGCCAAGACTCCAGAGGCTGTTGAGGAGCCAGCTGAAGATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR CCA 72 bp | GCCAGCAAACTGTCCAAGGGCACCTGGTTTAGGTCCTaGCACCCATCACCCCTTCACATCAGTCCCACACAC | + |
|
Preference number: 3 (lower is better) Translates to: ASKLSKGTWFRS*HPSPLHISPTH Trigger: GTGTGTGGGACTGATGTGAAGGGGTGATGGGTGCCAGGACCTAAACCAGGTGCCCTTGGACAGTTTGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
||
| 3UTR-3UTR CAA 90 bp | TACCCTTGGGCATTTCTTGGCACTTGTTTCAGACTGATGACCTGGGCCAAGACCACAGCCTCTGGAGTCTaGGCCAGGAGGTCAGCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: YPWAFLGTCFRLMTWAKTTASGV*ARRSAR Trigger: GCGAGCTGACCTCCTGGCCAAGACTCCAGAGGCTGT...GGTCTTGGCCCAGGTCATCAGTCTGAAACAAGTGCCAAGAAATGCCCAAGGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR GCA 72 bp | CTCAGGGAGGCCCTGGCTCCTAAGACACACAATTGCTaGAGTCTGCTCCGCCAGTTTCTTGGACTTGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LREALAPKTHNC*SLLRQFLGLVP Trigger: TGGGACAAGTCCAAGAAACTGGCGGAGCAGACTGCAGCAATTGTGTGTCTTAGGAGCCAGGGCCTCCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR CCA 72 bp | CGACACCATTCCAGCAGGCACATCTTGGGAGTGATCTaGGGTGGATATGCTCTCCGGTCAAACCTGATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RHHSSRHILGVI*GGYALRSNLIA Trigger: GGCTATCAGGTTTGACCGGAGAGCATATCCACCCCAGATCACTCCCAAGATGTGCCTGCTGGAATGGTGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCTTCTTGCATATCTCCCCAGGTAGTGCTGGCTCCTGAACTCTTGGGCCCCAGGATCTTCTCGATCTaGTCAGGGTCTGACAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: MASCISPQVVLAPELLGPRIFSI*SGSDSR Trigger: TCTGCTGTCAGACCCTGACAAGATCGAGAAGATCCT...GGGGCCCAAGAGTTCAGGAGCCAGCACTACCTGGGGAGATATGCAAGAAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR TCA 72 bp | AAGAGTGCTGAGGATCTTCTCGATCTTGTCAGGGTCTaGCAGCAGAGCGGCTCCCATTCCTCCCTTAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: KSAEDLLDLVRV*QQSGSHSSLSG Trigger: TCCACTAAGGGAGGAATGGGAGCCGCTCTGCTGTCAGACCCTGACAAGATCGAGAAGATCCTCAGCACTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR CCA 72 bp | GAGGTCGCTCGTCACGATTCCTCCCATGAACTGCAATaGCTGAAATGCCAGTCCTCTCTATCCGCTTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: EVARHDSSHELQ*LKCQSSLSASP Trigger: TGGTGAAGCGGATAGAGAGGACTGGCATTTCAGCCATTGCAGTTCATGGGAGGAATCGTGACGAGCGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR GCA 72 bp | CGTCACGATTCCTCCCATGAACTGCAATGGCTGAAATaGCAGTCCTCTCTATCCGCTTCACCAAGTTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RHDSSHELQWLK*QSSLSASPSSG Trigger: CCCTGAACTTGGTGAAGCGGATAGAGAGGACTGGCATTTCAGCCATTGCAGTTCATGGGAGGAATCGTGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR TCA 72 bp | TCGCTCGTCACGATTCCTCCCATGAACTGCAATGGCTaGAATGCCAGTCCTCTCTATCCGCTTCACCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SLVTIPPMNCNG*NASPLYPLHQV Trigger: AACTTGGTGAAGCGGATAGAGAGGACTGGCATTTCAGCCATTGCAGTTCATGGGAGGAATCGTGACGAGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR CCA 72 bp | TGGGCATTTCTTGGCACTTGTTTCAGACTGATGACCTaGGCCAAGACCTCTAGGTTTGCATGTCAACGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: WAFLGTCFRLMT*AKTSRFACQRP Trigger: TGGCCGTTGACATGCAAACCTAGAGGTCTTGGCCCAGGTCATCAGTCTGAAACAAGTGCCAAGAAATGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
||
| 3UTR CCA 72 bp | CCATTCCAGCAGGCACATCTTGGGAGTGATCTGGGGTaGATATGCTCTCCGGTCAAACCTGATAGCCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: PFQQAHLGSDLG*ICSPVKPDSHF Trigger: AAAATGGCTATCAGGTTTGACCGGAGAGCATATCCACCCCAGATCACTCCCAAGATGTGCCTGCTGGAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR GCA 72 bp | TCTCCTCACTACTGTCCAAGGTTACAAATGGCTTCTTaGATATCTCCCCAGGTAGTGCTGGCTCCTGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: SPHYCPRLQMAS*ISPQVVLAPEL Trigger: GAGTTCAGGAGCCAGCACTACCTGGGGAGATATGCAAGAAGCCATTTGTAACCTTGGACAGTAGTGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR CCA 72 bp | ATCTATAGTTCGCTGAACTGTTTCATACACAGGTTGTaGCAGCTTCTCCCTCCGACACCATTCCAGCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: IYSSLNCFIHRL*QLLPPTPFQQA Trigger: TGCCTGCTGGAATGGTGTCGGAGGGAGAAGCTGCCACAACCTGTGTATGAAACAGTTCAGCGAACTATAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR GCA 72 bp | CAGCAGGCACATCTTGGGAGTGATCTGGGGTGGATATaGTCTCCGGTCAAACCTGATAGCCATTTTAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: QQAHLGSDLGWI*SPVKPDSHFND Trigger: ATCATTAAAATGGCTATCAGGTTTGACCGGAGAGCATATCCACCCCAGATCACTCCCAAGATGTGCCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAACTGTTTCATACACAGGTTGTGGCAGCTTCTCCCTCCGACACCATTCCAGGATACCAATGTCAAGTaGGAAGTGAGGCCTAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LNCFIHRLWQLLPPTPFQDTNVK*EVRPKN Trigger: GTTTTTAGGCCTCACTTCCAACTTGACATTGGTATC...CTGGAATGGTGTCGGAGGGAGAAGCTGCCACAACCTGTGTATGAAACAGTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR TCA 72 bp | AAGTCTTCTATGTCCACATGTTGCTGGATATGGTCATaGGATCCTCCGTTGGCTATGACAGGAATGGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSSMSTCCWIWS*DPPLAMTGMER Trigger: CCTCTCCATTCCTGTCATAGCCAACGGAGGATCTCATGACCATATCCAGCAACATGTGGACATAGAAGACTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR TCA 72 bp | GTGACAACAGAGCAAAACATGCGATCTATAGTTCGCTaGACTGTTTCATACACAGGTTGTGGCAGCTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VTTEQNMRSIVR*TVSYTGCGSFS Trigger: GGAGAAGCTGCCACAACCTGTGTATGAAACAGTTCAGCGAACTATAGATCGCATGTTTTGCTCTGTTGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR CCA 72 bp | ATTGGCCATCAGACATATGAGAGACAGTATTACCCTTaGGCATTTCTTGGCACTTGTTTCAGACTGATGACC | + |
|
Preference number: 3 (lower is better) Translates to: IGHQTYERQYYP*AFLGTCFRLMT Trigger: GGTCATCAGTCTGAAACAAGTGCCAAGAAATGCCCAAGGGTAATACTGTCTCTCATATGTCTGATGGCCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
||
| 3UTR CCA 72 bp | CTCATTTTCAAAGACACACTCAGGTCATTAGGAACTTaGATTGGCCATCAGACATATGAGAGACAGTATTAC | + |
|
Preference number: 3 (lower is better) Translates to: LIFKDTLRSLGT*IGHQTYERQYY Trigger: GTAATACTGTCTCTCATATGTCTGATGGCCAATCCAAGTTCCTAATGACCTGAGTGTGTCTTTGAAAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
||
| 3UTR CAA 72 bp | CCCCCAGGGTCTTGGTCAGGGGCCTCTCGCTTGCGCTaGTTCAAGGAGGGACTCTCCTCACCCAGCCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: PPGSWSGASRLR*FKEGLSSPSRP Trigger: GGGTCGGCTGGGTGAGGAGAGTCCCTCCTTGAACAAGCGCAAGCGAGAGGCCCCTGACCAAGACCCTGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR CAA 72 bp | CTTGGGCCCCCAGGGTCTTGGTCAGGGGCCTCTCGCTaGCGCTTGTTCAAGGAGGGACTCTCCTCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGPPGSWSGASR*RLFKEGLSSPS Trigger: GCTGGGTGAGGAGAGTCCCTCCTTGAACAAGCGCAAGCGAGAGGCCCCTGACCAAGACCCTGGGGGCCCAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCACCTGGTTTAGGTCCTGGCACCCATCACCCCTTCACATCAGTCCCACACGGTAGTGCTGGCTCCTaGACTCTTGGGCCCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAPGLGPGTHHPFTSVPHGSAGS*TLGPPG Trigger: CCCTGGGGGCCCAAGAGTTCAGGAGCCAGCACTACC...GTGTGGGACTGATGTGAAGGGGTGATGGGTGCCAGGACCTAAACCAGGTGCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| 3UTR CAA 72 bp | GTATCTTCAGCTGGCTCCTCAACAGCCTCTGGAGTCTaGGCCAGGAGGTCAGCTCGCCGAGCATCGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSSAGSSTASGV*ARRSARRASSS Trigger: GGAGCTCGATGCTCGGCGAGCTGACCTCCTGGCCAAGACTCCAGAGGCTGTTGAGGAGCCAGCTGAAGATAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTTGCATGTCAACGGCCAGCAAACTGTCCAAGGGCACCTGGTTTAGGTCCTGGGCCCCCAGGGTCTTaGTCAGGGGCCTCTCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RFACQRPANCPRAPGLGPGPPGS*SGASRL Trigger: CAAGCGAGAGGCCCCTGACCAAGACCCTGGGGGCCC...AGGACCTAAACCAGGTGCCCTTGGACAGTTTGCTGGCCGTTGACATGCAAACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR TCA 90 bp | TTTGCATGTCAACGGCCAGCAAACTGTCCAAGGGCACCTGGTTTAGGTCCTGGCGGCTCGCTCTGCGTCTaGAGTCCCCATCTGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FACQRPANCPRAPGLGPGGSLCV*SPHLED Trigger: GTCTTCCAGATGGGGACTTCAGACGCAGAGCGAGCC...GCCAGGACCTAAACCAGGTGCCCTTGGACAGTTTGCTGGCCGTTGACATGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR TCA 90 bp | TGCATGTCAACGGCCAGCAAACTGTCCAAGGGCACCTGGTTTAGGTCCTGGCACGATCTTGTCAGGGTCTaGCAGCAGAGCGGCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CMSTASKLSKGTWFRSWHDLVRV*QQSGSH Trigger: ATGGGAGCCGCTCTGCTGTCAGACCCTGACAAGATC...GTGCCAGGACCTAAACCAGGTGCCCTTGGACAGTTTGCTGGCCGTTGACATGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR TCA 90 bp | GCATGTCAACGGCCAGCAAACTGTCCAAGGGCACCTGGTTTAGGTCCTGGCACCGGCACATCTTGGGAGTaGTCTGGGGTGGATATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ACQRPANCPRAPGLGPGTGTSWE*SGVDML Trigger: GAGCATATCCACCCCAGATCACTCCCAAGATGTGCC...GGTGCCAGGACCTAAACCAGGTGCCCTTGGACAGTTTGCTGGCCGTTGACATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR GCA 90 bp | GCAAACTGTCCAAGGGCACCTGGTTTAGGTCCTGGCACCCATCACCCCTTCACAGGGGTTCCACATGGCTaGTCGAGCCACCATCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ANCPRAPGLGPGTHHPFTGVPHG*SSHHHR Trigger: TCTGTGATGGTGGCTCGAGCAGCCATGTGGAACCCC...TGTGAAGGGGTGATGGGTGCCAGGACCTAAACCAGGTGCCCTTGGACAGTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR GCA 90 bp | TCACCCAGCCGACCCTCAGGGAGGCCCTGGCTCCTAAGACACACAATTGCTGCATCTGGAAGACCACCCTaGTCTGTTCTCTTTCACACG | + |
|
Preference number: 4 (lower is better) Translates to: SPSRPSGRPWLLRHTIAASGRPP*SVLFHT Trigger: CGTGTGAAAGAGAACAGAGCAGGGTGGTCTTCCAGA...TGCAGCAATTGTGTGTCTTAGGAGCCAGGGCCTCCCTGAGGGTCGGCTGGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR CAA 72 bp | AGCTTCTCCCTCCGACACCATTCCAGCAGGCACATCTaGGGAGTGATCTGGGGTGGATATGCTCTCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFSLRHHSSRHI*GVIWGGYALRS Trigger: TGACCGGAGAGCATATCCACCCCAGATCACTCCCAAGATGTGCCTGCTGGAATGGTGTCGGAGGGAGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCACCTGGTTTAGGTCCTGGCACCCATCACCCCTTCACATCAGTCCCACACATCCTCCGTTGGCTATaGCAGGAATGGAGAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RAPGLGPGTHHPFTSVPHILRWL*QEWRGF Trigger: AAACCCTCTCCATTCCTGTCATAGCCAACGGAGGAT...GTGTGGGACTGATGTGAAGGGGTGATGGGTGCCAGGACCTAAACCAGGTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR TCA 90 bp | GCAAACTGTCCAAGGGCACCTGGTTTAGGTCCTGGCACCCATCACCCCTTCACACAAAGTCCACTGTGCTaGGCACCTCGTTTACAACTC | + |
|
Preference number: 4 (lower is better) Translates to: ANCPRAPGLGPGTHHPFTQSPLC*APRLQL Trigger: GAGTTGTAAACGAGGTGCTCAGCACAGTGGACTTTG...TGTGAAGGGGTGATGGGTGCCAGGACCTAAACCAGGTGCCCTTGGACAGTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCATGTCAACGGCCAGCAAACTGTCCAAGGGCACCTGGTTTAGGTCCTGGCCATTTTCTACAAGCCTaGCCACAGCAAGGGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FACQRPANCPRAPGLGPGHFLQA*PQQGLA Trigger: AGCGAGCCCTTGCTGTGGCCAGGCTTGTAGAAAATG...GCCAGGACCTAAACCAGGTGCCCTTGGACAGTTTGCTGGCCGTTGACATGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR CCA 90 bp | AGGGCACCTGGTTTAGGTCCTGGCACCCATCACCCCTTCACATCAGTCCCACACACTTGTCCCACAAGGTaGACTGGTACTTTTGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RAPGLGPGTHHPFTSVPHTCPTR*TGTFVP Trigger: CGGAACAAAAGTACCAGTCCACCTTGTGGGACAAGT...GTGTGGGACTGATGTGAAGGGGTGATGGGTGCCAGGACCTAAACCAGGTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| 3UTR CAA 72 bp | TGCTCGAGCCACCATCACAGAGGAGGCAGCCGTGGCTaGTCGAAAGTCTTCTATGTCCACATGTTGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CSSHHHRGGSRG*SKVFYVHMLLD Trigger: ATCCAGCAACATGTGGACATAGAAGACTTTCGACAAGCCACGGCTGCCTCCTCTGTGATGGTGGCTCGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| 3UTR CAA 72 bp | TCTTCCCTGGGGCGACTCCAACTGTTCCCGCAGCATTaGGCACAAGCAGTACTTGGTGTTGGTGTAGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLGRLQLFPQH*AQAVLGVGVVV Trigger: AACCACTACACCAACACCAAGTACTGCTTGTGCCAAATGCTGCGGGAACAGTTGGAGTCGCCCCAGGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGCACCTGGTTTAGGTCCTGGCACCCATCACCCCTTCACATCAGTCCCACAAAGACACACAATTGCTaGAGTCTGCTCCGCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KGTWFRSWHPSPLHISPTKTHNC*SLLRQF Trigger: AAACTGGCGGAGCAGACTGCAGCAATTGTGTGTCTT...TGTGGGACTGATGTGAAGGGGTGATGGGTGCCAGGACCTAAACCAGGTGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR CCA 90 bp | AGACTGATGACCTGGGCCAAGACCTCTAGGTTTGCATGTCAACGGCCAGCAAACTCTGAAGTCCCCATCTaGAAGACCACCCTGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLMTWAKTSRFACQRPANSEVPI*KTTLLC Trigger: ACAGAGCAGGGTGGTCTTCCAGATGGGGACTTCAGA...GTTTGCTGGCCGTTGACATGCAAACCTAGAGGTCTTGGCCCAGGTCATCAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR TCA 90 bp | AAGGGCACCTGGTTTAGGTCCTGGCACCCATCACCCCTTCACATCAGTCCCACATTGGACAGCCCATGTTaGCATCAATACCAGCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: KGTWFRSWHPSPLHISPTLDSPC*HQYQLH Trigger: ATGTAGCTGGTATTGATGTCAACATGGGCTGTCCAA...TGTGGGACTGATGTGAAGGGGTGATGGGTGCCAGGACCTAAACCAGGTGCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR CCA 90 bp | TTTGCATGTCAACGGCCAGCAAACTGTCCAAGGGCACCTGGTTTAGGTCCTGGCTCCCATGAACTGCAATaGCTGAAATGCCAGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FACQRPANCPRAPGLGPGSHELQ*LKCQSS Trigger: AGAGGACTGGCATTTCAGCCATTGCAGTTCATGGGA...GCCAGGACCTAAACCAGGTGCCCTTGGACAGTTTGCTGGCCGTTGACATGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR CCA 90 bp | AGACTGATGACCTGGGCCAAGACCTCTAGGTTTGCATGTCAACGGCCAGCAAACAGAAGTATCTTCAGCTaGCTCCTCAACAGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLMTWAKTSRFACQRPANRSIFS*LLNSLW Trigger: CCAGAGGCTGTTGAGGAGCCAGCTGAAGATACTTCT...GTTTGCTGGCCGTTGACATGCAAACCTAGAGGTCTTGGCCCAGGTCATCAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR TCA 90 bp | GTTCAGGGTATCTTCCAGCGAGGGCAGGATTCGGATTTTACAGGTCACAGGTCTCAAAGTCCACTGTGCTaGGCACCTCGTTTACAACTC | + |
|
Preference number: 4 (lower is better) Translates to: VQGIFQRGQDSDFTGHRSQSPLC*APRLQL Trigger: GAGTTGTAAACGAGGTGCTCAGCACAGTGGACTTTG...AGACCTGTGACCTGTAAAATCCGAATCCTGCCCTCGCTGGAAGATACCCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| CDS-3UTR TCA 90 bp | AGACTGATGACCTGGGCCAAGACCTCTAGGTTTGCATGTCAACGGCCAGCAAACATGAACTGCAATGGCTaGAATGCCAGTCCTCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RLMTWAKTSRFACQRPANMNCNG*NASPLY Trigger: ATAGAGAGGACTGGCATTTCAGCCATTGCAGTTCAT...GTTTGCTGGCCGTTGACATGCAAACCTAGAGGTCTTGGCCCAGGTCATCAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR GCA 90 bp | AGACCTCTAGGTTTGCATGTCAACGGCCAGCAAACTGTCCAAGGGCACCTGGTTTATCTGATGTACTTCTaGATGACTTCCTCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPLGLHVNGQQTVQGHLVYLMYF*MTSSRG Trigger: TCCCCTGGAGGAAGTCATGCAGAAGTACATCAGATA...AACCAGGTGCCCTTGGACAGTTTGCTGGCCGTTGACATGCAAACCTAGAGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR CCA 90 bp | GTTCAGGGTATCTTCCAGCGAGGGCAGGATTCGGATTTTACAGGTCACAGGTCTACAACTCGCTTGCACTaGAGCATCTTGAGGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: VQGIFQRGQDSDFTGHRSTTRLH*SILRSI Trigger: GATTGACCTCAAGATGCTCCAGTGCAAGCGAGTTGT...AGACCTGTGACCTGTAAAATCCGAATCCTGCCCTCGCTGGAAGATACCCTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCATGTCAACGGCCAGCAAACTGTCCAAGGGCACCTGGTTTAGGTCCTGGCAGTGGAATACTCTTTTaGACAGCCCATGTTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: FACQRPANCPRAPGLGPGSGILF*TAHVDI Trigger: GATGTCAACATGGGCTGTCCAAAAGAGTATTCCACT...GCCAGGACCTAAACCAGGTGCCCTTGGACAGTTTGCTGGCCGTTGACATGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
||
| CDS-3UTR CCA 90 bp | AGACCTCTAGGTTTGCATGTCAACGGCCAGCAAACTGTCCAAGGGCACCTGGTTGTCCAAGGTTACAAATaGCTTCTTGCATATCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPLGLHVNGQQTVQGHLVVQGYK*LLAYLP Trigger: GGGGAGATATGCAAGAAGCCATTTGTAACCTTGGAC...AACCAGGTGCCCTTGGACAGTTTGCTGGCCGTTGACATGCAAACCTAGAGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| 3UTR CAA 72 bp | AGCCGTGGCTTGTCGAAAGTCTTCTATGTCCACATGTaGCTGGATATGGTCATGAGATCCTCCGTTGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: SRGLSKVFYVHM*LDMVMRSSVGY Trigger: ATAGCCAACGGAGGATCTCATGACCATATCCAGCAACATGTGGACATAGAAGACTTTCGACAAGCCACGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| CDS-3UTR CCA 90 bp | AGGTTTGCATGTCAACGGCCAGCAAACTGTCCAAGGGCACCTGGTTTAGGTCCTAGCAGTACTTGGTGTTaGTGTAGTGGTTATCATACT | + |
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Preference number: 4 (lower is better) Translates to: RFACQRPANCPRAPGLGPSSTWC*CSGYHT Trigger: AGTATGATAACCACTACACCAACACCAAGTACTGCT...AGGACCTAAACCAGGTGCCCTTGGACAGTTTGCTGGCCGTTGACATGCAAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CCA 90 bp | AGGCCTAAAAACCTCATTTTCAAAGACACACTCAGGTCATTAGGAACTTGGATTTGGCTCCTGAACTCTTaGGCCCCCAGGGTCTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: RPKNLIFKDTLRSLGTWIWLLNS*APRVLV Trigger: GACCAAGACCCTGGGGGCCCAAGAGTTCAGGAGCCA...AATCCAAGTTCCTAATGACCTGAGTGTGTCTTTGAAAATGAGGTTTTTAGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CCA 90 bp | GATACCAATGTCAAGTTGGAAGTGAGGCCTAAAAACCTCATTTTCAAAGACACACTCCTCAACAGCCTCTaGAGTCTTGGCCAGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: DTNVKLEVRPKNLIFKDTLLNSL*SLGQEV Trigger: GACCTCCTGGCCAAGACTCCAGAGGCTGTTGAGGAG...TGTGTCTTTGAAAATGAGGTTTTTAGGCCTCACTTCCAACTTGACATTGGTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CCA 90 bp | ACCAATGTCAAGTTGGAAGTGAGGCCTAAAAACCTCATTTTCAAAGACACACTCGCTCCGCCAGTTTCTTaGACTTGTCCCACAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TNVKLEVRPKNLIFKDTLAPPVS*TCPTRW Trigger: CCACCTTGTGGGACAAGTCCAAGAAACTGGCGGAGC...GAGTGTGTCTTTGAAAATGAGGTTTTTAGGCCTCACTTCCAACTTGACATTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CCA 90 bp | ACCAATGTCAAGTTGGAAGTGAGGCCTAAAAACCTCATTTTCAAAGACACACTCCCCTCAGGGAGGCCCTaGCTCCTAAGACACACAATT | + |
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Preference number: 4 (lower is better) Translates to: TNVKLEVRPKNLIFKDTLPSGRP*LLRHTI Trigger: AATTGTGTGTCTTAGGAGCCAGGGCCTCCCTGAGGG...GAGTGTGTCTTTGAAAATGAGGTTTTTAGGCCTCACTTCCAACTTGACATTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| 3UTR CAA 72 bp | TTTCTTGGACTTGTCCCACAAGGTGGACTGGTACTTTaGTTCCGCAACAGTGACAACAGAGCAAAACATGCG | + |
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Preference number: 4 (lower is better) Translates to: FLGLVPQGGLVL*FRNSDNRAKHA Trigger: CGCATGTTTTGCTCTGTTGTCACTGTTGCGGAACAAAAGTACCAGTCCACCTTGTGGGACAAGTCCAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| CDS-3UTR GCA 90 bp | CATCAGACATATGAGAGACAGTATTACCCTTGGGCATTTCTTGGCACTTGTTTCACAATTGCTGCAGTCTaGTCCGCCAGTTTCTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: HQTYERQYYPWAFLGTCFTIAAV*SASFLD Trigger: GTCCAAGAAACTGGCGGAGCAGACTGCAGCAATTGT...GAAACAAGTGCCAAGAAATGCCCAAGGGTAATACTGTCTCTCATATGTCTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR GCA 90 bp | CCTAAAAACCTCATTTTCAAAGACACACTCAGGTCATTAGGAACTTGGATTGGCTCTGGAAGACCACCCTaGTCTGTTCTCTTTCACACG | + |
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Preference number: 4 (lower is better) Translates to: PKNLIFKDTLRSLGTWIGSGRPP*SVLFHT Trigger: CGTGTGAAAGAGAACAGAGCAGGGTGGTCTTCCAGA...GCCAATCCAAGTTCCTAATGACCTGAGTGTGTCTTTGAAAATGAGGTTTTTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| CDS-3UTR CCA 90 bp | AGGCCTAAAAACCTCATTTTCAAAGACACACTCAGGTCATTAGGAACTTGGATTCAGAGGAGGCAGCCGTaGCTTGTCGAAAGTCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: RPKNLIFKDTLRSLGTWIQRRQP*LVESLL Trigger: TAGAAGACTTTCGACAAGCCACGGCTGCCTCCTCTG...AATCCAAGTTCCTAATGACCTGAGTGTGTCTTTGAAAATGAGGTTTTTAGGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CCA 90 bp | AGGCCTAAAAACCTCATTTTCAAAGACACACTCAGGTCATTAGGAACTTGGATTCATCGAGCTCCCGAATaGTCTCCTCATAGAAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RPKNLIFKDTLRSLGTWIHRAPE*SPHRRH Trigger: GTGCCTTCTATGAGGAGACCATTCGGGAGCTCGATG...AATCCAAGTTCCTAATGACCTGAGTGTGTCTTTGAAAATGAGGTTTTTAGGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CCA 90 bp | TTGGAAGTGAGGCCTAAAAACCTCATTTTCAAAGACACACTCAGGTCATTAGGATTCATACACAGGTTGTaGCAGCTTCTCCCTCCGACA | + |
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Preference number: 4 (lower is better) Translates to: LEVRPKNLIFKDTLRSLGFIHRL*QLLPPT Trigger: TGTCGGAGGGAGAAGCTGCCACAACCTGTGTATGAA...TCCTAATGACCTGAGTGTGTCTTTGAAAATGAGGTTTTTAGGCCTCACTTCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CCA 90 bp | CCTAAAAACCTCATTTTCAAAGACACACTCAGGTCATTAGGAACTTGGATTGGCACAACTCGCTTGCACTaGAGCATCTTGAGGTCAATC | + |
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Preference number: 4 (lower is better) Translates to: PKNLIFKDTLRSLGTWIGTTRLH*SILRSI Trigger: GATTGACCTCAAGATGCTCCAGTGCAAGCGAGTTGT...GCCAATCCAAGTTCCTAATGACCTGAGTGTGTCTTTGAAAATGAGGTTTTTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| CDS-3UTR CCA 90 bp | AGGCCTAAAAACCTCATTTTCAAAGACACACTCAGGTCATTAGGAACTTGGATTTGTTCCCGCAGCATTTaGCACAAGCAGTACTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RPKNLIFKDTLRSLGTWICSRSI*HKQYLV Trigger: CACCAAGTACTGCTTGTGCCAAATGCTGCGGGAACA...AATCCAAGTTCCTAATGACCTGAGTGTGTCTTTGAAAATGAGGTTTTTAGGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CCA 90 bp | CCTAAAAACCTCATTTTCAAAGACACACTCAGGTCATTAGGAACTTGGATTGGCTCCCACAAGGTGGACTaGTACTTTTGTTCCGCAACA | + |
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Preference number: 4 (lower is better) Translates to: PKNLIFKDTLRSLGTWIGSHKVD*YFCSAT Trigger: TGTTGCGGAACAAAAGTACCAGTCCACCTTGTGGGA...GCCAATCCAAGTTCCTAATGACCTGAGTGTGTCTTTGAAAATGAGGTTTTTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR GCA 90 bp | ACATATGAGAGACAGTATTACCCTTGGGCATTTCTTGGCACTTGTTTCAGACTGTTACAAATGGCTTCTTaGATATCTCCCCAGGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: TYERQYYPWAFLGTCFRLLQMAS*ISPQVV Trigger: CACTACCTGGGGAGATATGCAAGAAGCCATTTGTAA...CAGTCTGAAACAAGTGCCAAGAAATGCCCAAGGGTAATACTGTCTCTCATATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CCA 90 bp | GATACCAATGTCAAGTTGGAAGTGAGGCCTAAAAACCTCATTTTCAAAGACACAGGCACAAGCAGTACTTaGTGTTGGTGTAGTGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: DTNVKLEVRPKNLIFKDTGTSST*CWCSGY Trigger: ATAACCACTACACCAACACCAAGTACTGCTTGTGCC...TGTGTCTTTGAAAATGAGGTTTTTAGGCCTCACTTCCAACTTGACATTGGTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CAA 90 bp | CTGTCAGCCAGAGCAGGAGTCAGCAGCCTTCCAGAAGATTCTCCTCACTACTGTGGGCTAGGAGGCGCATaGGCAGAGTCCCCACCCGAA | + |
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Preference number: 5 (lower is better) Translates to: LSARAGVSSLPEDSPHYCGLGGA*AESPPE Trigger: TTCGGGTGGGGACTCTGCCAATGCGCCTCCTAGCCC...ACAGTAGTGAGGAGAATCTTCTGGAAGGCTGCTGACTCCTGCTCTGGCTGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| CDS-3UTR CAA 90 bp | AGGTTTGCATGTCAACGGCCAGCAAACTGTCCAAGGGCACCTGGTTTAGGTCCTACAGCCTCTGGAGTCTaGGCCAGGAGGTCAGCTCGC | + |
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Preference number: 5 (lower is better) Translates to: RFACQRPANCPRAPGLGPTASGV*ARRSAR Trigger: GCGAGCTGACCTCCTGGCCAAGACTCCAGAGGCTGT...AGGACCTAAACCAGGTGCCCTTGGACAGTTTGCTGGCCGTTGACATGCAAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CAA 90 bp | AGACTGATGACCTGGGCCAAGACCTCTAGGTTTGCATGTCAACGGCCAGCAAACCTGGCTCCTGAACTCTaGGGCCCCCAGGGTCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: RLMTWAKTSRFACQRPANLAPEL*GPQGLG Trigger: ACCAAGACCCTGGGGGCCCAAGAGTTCAGGAGCCAG...GTTTGCTGGCCGTTGACATGCAAACCTAGAGGTCTTGGCCCAGGTCATCAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CAA 90 bp | TTTCTTGGCACTTGTTTCAGACTGATGACCTGGGCCAAGACCTCTAGGTTTGCAGGGCTAGGAGGCGCATaGGCAGAGTCCCCACCCGAA | + |
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Preference number: 5 (lower is better) Translates to: FLGTCFRLMTWAKTSRFAGLGGA*AESPPE Trigger: TTCGGGTGGGGACTCTGCCAATGCGCCTCCTAGCCC...TGCAAACCTAGAGGTCTTGGCCCAGGTCATCAGTCTGAAACAAGTGCCAAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| CDS-3UTR CAA 90 bp | AGACCTCTAGGTTTGCATGTCAACGGCCAGCAAACTGTCCAAGGGCACCTGGTTTCCAGCAGGCACATCTaGGGAGTGATCTGGGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: RPLGLHVNGQQTVQGHLVSSRHI*GVIWGG Trigger: TCCACCCCAGATCACTCCCAAGATGTGCCTGCTGGA...AACCAGGTGCCCTTGGACAGTTTGCTGGCCGTTGACATGCAAACCTAGAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CAA 90 bp | AGACTGATGACCTGGGCCAAGACCTCTAGGTTTGCATGTCAACGGCCAGCAAACTGCTCCGCCAGTTTCTaGGACTTGTCCCACAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: RLMTWAKTSRFACQRPANCSASF*DLSHKV Trigger: CACCTTGTGGGACAAGTCCAAGAAACTGGCGGAGCA...GTTTGCTGGCCGTTGACATGCAAACCTAGAGGTCTTGGCCCAGGTCATCAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CAA 90 bp | ACAAATTTCCTGGGAAGACTGGGCAGCATGAAGCAGTCTTCCCTGGGGCGACTCTTGCACTGGAGCATCTaGAGGTCAATCAGCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: TNFLGRLGSMKQSSLGRLLHWSI*RSISSS Trigger: TGAGGAGCTGATTGACCTCAAGATGCTCCAGTGCAA...GAGTCGCCCCAGGGAAGACTGCTTCATGCTGCCCAGTCTTCCCAGGAAATTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119736.8 |
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| CDS-3UTR CAA 90 bp | AGACCTCTAGGTTTGCATGTCAACGGCCAGCAAACTGTCCAAGGGCACCTGGTTCTGTTCCCGCAGCATTaGGCACAAGCAGTACTTGGT | + |
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Preference number: 5 (lower is better) Translates to: RPLGLHVNGQQTVQGHLVLFPQH*AQAVLG Trigger: ACCAAGTACTGCTTGTGCCAAATGCTGCGGGAACAG...AACCAGGTGCCCTTGGACAGTTTGCTGGCCGTTGACATGCAAACCTAGAGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CAA 90 bp | ACATATGAGAGACAGTATTACCCTTGGGCATTTCTTGGCACTTGTTTCAGACTGTGGGCCCCCAGGGTCTaGGTCAGGGGCCTCTCGCTT | + |
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Preference number: 5 (lower is better) Translates to: TYERQYYPWAFLGTCFRLWAPRV*VRGLSL Trigger: AAGCGAGAGGCCCCTGACCAAGACCCTGGGGGCCCA...CAGTCTGAAACAAGTGCCAAGAAATGCCCAAGGGTAATACTGTCTCTCATATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CAA 90 bp | AAGGGCACCTGGTTTAGGTCCTGGCACCCATCACCCCTTCACATCAGTCCCACATTTGGACAGCCCATGTaGACATCAATACCAGCTACA | + |
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Preference number: 5 (lower is better) Translates to: KGTWFRSWHPSPLHISPTFGQPM*TSIPAT Trigger: TGTAGCTGGTATTGATGTCAACATGGGCTGTCCAAA...TGTGGGACTGATGTGAAGGGGTGATGGGTGCCAGGACCTAAACCAGGTGCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CAA 90 bp | TTTCTTGGCACTTGTTTCAGACTGATGACCTGGGCCAAGACCTCTAGGTTTGCAGCCAGTTTCTTGGACTaGTCCCACAAGGTGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: FLGTCFRLMTWAKTSRFAASFLD*SHKVDW Trigger: CCAGTCCACCTTGTGGGACAAGTCCAAGAAACTGGC...TGCAAACCTAGAGGTCTTGGCCCAGGTCATCAGTCTGAAACAAGTGCCAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CAA 90 bp | TTTCTTGGCACTTGTTTCAGACTGATGACCTGGGCCAAGACCTCTAGGTTTGCATGTTTCATACACAGGTaGTGGCAGCTTCTCCCTCCG | + |
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Preference number: 5 (lower is better) Translates to: FLGTCFRLMTWAKTSRFACFIHR*WQLLPP Trigger: CGGAGGGAGAAGCTGCCACAACCTGTGTATGAAACA...TGCAAACCTAGAGGTCTTGGCCCAGGTCATCAGTCTGAAACAAGTGCCAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CAA 90 bp | TTTCTTGGCACTTGTTTCAGACTGATGACCTGGGCCAAGACCTCTAGGTTTGCAAGGATCTTCTCGATCTaGTCAGGGTCTGACAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: FLGTCFRLMTWAKTSRFARIFSI*SGSDSR Trigger: TCTGCTGTCAGACCCTGACAAGATCGAGAAGATCCT...TGCAAACCTAGAGGTCTTGGCCCAGGTCATCAGTCTGAAACAAGTGCCAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CAA 90 bp | AGACATATGAGAGACAGTATTACCCTTGGGCATTTCTTGGCACTTGTTTCAGACGGACGAAGGCCATCCTaGAGGAAGATGGAGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RHMRDSITLGHFLALVSDGRRPS*RKMEGF Trigger: GAACCCCTCCATCTTCCTCAAGGATGGCCTTCGTCC...GTCTGAAACAAGTGCCAAGAAATGCCCAAGGGTAATACTGTCTCTCATATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CAA 90 bp | TTTCTTGGCACTTGTTTCAGACTGATGACCTGGGCCAAGACCTCTAGGTTTGCAGTTACAAATGGCTTCTaGCATATCTCCCCAGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: FLGTCFRLMTWAKTSRFAVTNGF*HISPGS Trigger: ACTACCTGGGGAGATATGCAAGAAGCCATTTGTAAC...TGCAAACCTAGAGGTCTTGGCCCAGGTCATCAGTCTGAAACAAGTGCCAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS-3UTR CAA 90 bp | CCTAAAAACCTCATTTTCAAAGACACACTCAGGTCATTAGGAACTTGGATTGGCTTGCACTGGAGCATCTaGAGGTCAATCAGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PKNLIFKDTLRSLGTWIGLHWSI*RSISSS Trigger: TGAGGAGCTGATTGACCTCAAGATGCTCCAGTGCAA...GCCAATCCAAGTTCCTAATGACCTGAGTGTGTCTTTGAAAATGAGGTTTTTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| CDS CAA 72 bp | CAATGTCCGCTCCATAATCCAGGGCTAGGAGGCGCATaGGCAGAGTCCCCACCCGAACCATCGGGGCTAAGA | + |
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Preference number: 6 (lower is better) Translates to: QCPLHNPGLGGA*AESPPEPSGLR Trigger: TCTTAGCCCCGATGGTTCGGGTGGGGACTCTGCCAATGCGCCTCCTAGCCCTGGATTATGGAGCGGACATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| CDS TCA 72 bp | TTGGCAGAGTCCCCACCCGAACCATCGGGGCTAAGATaGGCTTATTGTGGTAGCACAGGGAGAGGCTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LAESPPEPSGLR*AYCGSTGRGCS Trigger: TGAACAGCCTCTCCCTGTGCTACCACAATAAGCTCATCTTAGCCCCGATGGTTCGGGTGGGGACTCTGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| CDS GCA 72 bp | GCTCTGCGTCTGAAGTCCCCATCTGGAAGACCACCCTaGTCTGTTCTCTTTCACACGTACGGAAGACTACCC | + |
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Preference number: 6 (lower is better) Translates to: ALRLKSPSGRPP*SVLFHTYGRLP Trigger: GGGTAGTCTTCCGTACGTGTGAAAGAGAACAGAGCAGGGTGGTCTTCCAGATGGGGACTTCAGACGCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034375.11 |
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| CDS TCA 72 bp | CTACCCGGTCATCAGGAGCAACAAAGTCCACTGTGCTaGGCACCTCGTTTACAACTCGCTTGCACTGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: LPGHQEQQSPLC*APRLQLACTGA Trigger: TGCTCCAGTGCAAGCGAGTTGTAAACGAGGTGCTCAGCACAGTGGACTTTGTTGCTCCTGATGACCGGGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| CDS CAA 72 bp | AAGTCCACTGTGCTGAGCACCTCGTTTACAACTCGCTaGCACTGGAGCATCTTGAGGTCAATCAGCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: KSTVLSTSFTTR*HWSILRSISSS Trigger: TGAGGAGCTGATTGACCTCAAGATGCTCCAGTGCAAGCGAGTTGTAAACGAGGTGCTCAGCACAGTGGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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| CDS TCA 72 bp | GCACCTCGTTTACAACTCGCTTGCACTGGAGCATCTTaGGGTCAATCAGCTCCTCACAGTAAACAATGTCCG | + |
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Preference number: 6 (lower is better) Translates to: APRLQLACTGAS*GQSAPHSKQCP Trigger: CGGACATTGTTTACTGTGAGGAGCTGATTGACCTCAAGATGCTCCAGTGCAAGCGAGTTGTAAACGAGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034375.11 ENSMUST00000119736.8 |
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