Pregenerated sensors for DUOXA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027224Ensembl transcript IDs: ENSMUST00000028653.14, ENSMUST00000110537.8, ENSMUST00000110538.8, ENSMUST00000147788.8, ENSMUST00000148417.8, ENSMUST00000154412.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGCTCTGGGGGAGGTGCGCCCTCTAGTGAGATCTGAGAGGAACTaGCAGGCATCTCCTCCAACGGGTGGTGGGTTACGTTCTACCCAA | + |
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Preference number: 1 (lower is better) Translates to: RALGEVRPLVRSERN*QASPPTGGGLRSTQ Trigger: TTGGGTAGAACGTAACCCACCACCCGTTGGAGGAGATGCCTGCCAGTTCCTCTCAGATCTCACTAGAGGGCGCACCTCCCCCAGAGCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR GCA 90 bp | AGGGCATGTCTGCAATGCCCCCTCCTGGCCTCTGCAGGCACTGCGTaGAAGTGGTTCACAGACATACAATCAGGCAAAGTACTTATACAC | + |
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Preference number: 1 (lower is better) Translates to: RACLQCPLLASAGTA*KWFTDIQSGKVLIH Trigger: GTGTATAAGTACTTTGCCTGATTGTATGTCTGTGAACCACTTGCACGCAGTGCCTGCAGAGGCCAGGAGGGGGCATTGCAGACATGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR GCA 90 bp | TTCCAGGGCATGTCTGCAATGCCCCCTCCTGGCCTCTGCAGGCACTaGGTGCAAGTGGTTCACAGACATACAATCAGGCAAAGTACTTAT | + |
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Preference number: 1 (lower is better) Translates to: FQGMSAMPPPGLCRH*VQVVHRHTIRQSTY Trigger: ATAAGTACTTTGCCTGATTGTATGTCTGTGAACCACTTGCACGCAGTGCCTGCAGAGGCCAGGAGGGGGCATTGCAGACATGCCCTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR CCA 90 bp | ATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTaGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: MIQLKPTSWTVLLVL*GSNNVWRQSGNSVA Trigger: AGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| 3UTR CCA 90 bp | TGTCTGCAATGCCCCCTCCTGGCCTCTGCAGGCACTGCGTGCAAGTaGTTCACAGACATACAATCAGGCAAAGTACTTATACACATTATA | + |
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Preference number: 1 (lower is better) Translates to: CLQCPLLASAGTACK*FTDIQSGKVLIHII Trigger: TATAATGTGTATAAGTACTTTGCCTGATTGTATGTCTGTGAACCACTTGCACGCAGTGCCTGCAGAGGCCAGGAGGGGGCATTGCAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR CCA 90 bp | TTTTTCTTCAAAATTCCCATGCCCATCAATTTCCTTGGCTTCTCTTaGCCATTTGGAGCTACAACCTTGAGAAACTCCTCTAGGCTAGTA | + |
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Preference number: 1 (lower is better) Translates to: FFFKIPMPINFLGFS*PFGATTLRNSSRLV Trigger: TACTAGCCTAGAGGAGTTTCTCAAGGTTGTAGCTCCAAATGGCCAAGAGAAGCCAAGGAAATTGATGGGCATGGGAATTTTGAAGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCCTCCTCCTCGGAGGGGCGGTGGTGATTCTCCACTATACTCGGCCCAGCTGCAATGCCCCCTCCTaGCCTCTGCAGGCACTGCGT | + |
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Preference number: 2 (lower is better) Translates to: LSLLLGGAVVILHYTRPSCNAPS*PLQALR Trigger: ACGCAGTGCCTGCAGAGGCCAGGAGGGGGCATTGCA...GCTGGGCCGAGTATAGTGGAGAATCACCACCGCCCCTCCGAGGAGGAGGCTCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGTGATTCTCCACTATACTCGGCCCAGCGCCCTTCGCTCCTTTCTGGATCTCCCCCTCCTGGCCTCTaGAGGCACTGCGTGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: GGDSPLYSAQRPSLLSGSPPPGL*RHCVQV Trigger: CACTTGCACGCAGTGCCTGCAGAGGCCAGGAGGGGG...AGATCCAGAAAGGAGCGAAGGGCGCTGGGCCGAGTATAGTGGAGAATCACCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGAGCCTCCTCCTCGGAGGGGCGGTGGTGATTCTCCACTATACTCGGCCCGCCCATCAATTTCCTTaGCTTCTCTTGGCCATTTGG | + |
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Preference number: 2 (lower is better) Translates to: ILSLLLGGAVVILHYTRPAHQFP*LLLAIW Trigger: CCAAATGGCCAAGAGAAGCCAAGGAAATTGATGGGC...GGGCCGAGTATAGTGGAGAATCACCACCGCCCCTCCGAGGAGGAGGCTCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR-3UTR CCA 90 bp | CGGCCCAGCGCCCTTCGCTCCTTTCTGGATCTAAGTGTCAAAGACTGTAGCAACGAGCATAGCTTAGTCTaGAGAACTGCTTGTCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: RPSALRSFLDLSVKDCSNEHSLV*RTACPC Trigger: GCAGGGACAAGCAGTTCTCCAGACTAAGCTATGCTC...GTTGCTACAGTCTTTGACACTTAGATCCAGAAAGGAGCGAAGGGCGCTGGGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTATGTACATTCAGGTGCTGAGAAGCCTGAGAAACACAGTAGGGCTCTGGGGTGGGGTCTGGAGAGATaGTTCAGTGGTAGAACACTA | + |
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Preference number: 2 (lower is better) Translates to: LYVHSGAEKPEKHSRALGWGLER*FSGRTL Trigger: TAGTGTTCTACCACTGAACCATCTCTCCAGACCCCA...CCCCAGAGCCCTACTGTGTTTCTCAGGCTTCTCAGCACCTGAATGTACATACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCATGCCCATCAATTTCCTTGGCTTCTCTTGGCCATTTGGAGCTACAACCTTAGATCTGAGAGGAACTaGCAGGCATCTCCTCCAACG | + |
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Preference number: 2 (lower is better) Translates to: SHAHQFPWLLLAIWSYNLRSERN*QASPPT Trigger: CGTTGGAGGAGATGCCTGCCAGTTCCTCTCAGATCT...AAGGTTGTAGCTCCAAATGGCCAAGAGAAGCCAAGGAAATTGATGGGCATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGAGATGGTTCAGTGGTAGAACACTAGCTGCCCTTTCAGGTATTGGTATTGTTCTCCAGCTAATGTaGACCCAGAGGTCACAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LERWFSGRTLAALSGIGIVLQLM*TQRSQK Trigger: CTTTTGTGACCTCTGGGTCCACATTAGCTGGAGAAC...AATACCAATACCTGAAAGGGCAGCTAGTGTTCTACCACTGAACCATCTCTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTTCAAAATTCCCATGCCCATCAATTTCCTTGGCTTCTCTTGGCCATTTGGTTTCTGGGCATGTCTaGCATCTCTTCAGAGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: FSSKFPCPSISLASLGHLVSGHV*HLFRAL Trigger: TAAGGCTCTGAAGAGATGTCAGACATGCCCAGAAAC...CAAATGGCCAAGAGAAGCCAAGGAAATTGATGGGCATGGGAATTTTGAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR GCA 72 bp | TGGCCAGTTCCTGTAACTCCAGTTCCAGGGCATGTCTaGAATGCCCCCTCCTGGCCTCTGCAGGCACTGCGT | + |
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Preference number: 3 (lower is better) Translates to: WPVPVTPVPGHV*NAPSWPLQALR Trigger: ACGCAGTGCCTGCAGAGGCCAGGAGGGGGCATTGCAGACATGCCCTGGAACTGGAGTTACAGGAACTGGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR CCA 72 bp | ACTCCAGTTCCAGGGCATGTCTGCAATGCCCCCTCCTaGCCTCTGCAGGCACTGCGTGCAAGTGGTTCACAG | + |
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Preference number: 3 (lower is better) Translates to: TPVPGHVCNAPS*PLQALRASGSQ Trigger: CTGTGAACCACTTGCACGCAGTGCCTGCAGAGGCCAGGAGGGGGCATTGCAGACATGCCCTGGAACTGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR CCA 72 bp | GGGGAGGTGCGCCCTCTAGTGAGATCTGAGAGGAACTaGCAGGCATCTCCTCCAACGGGTGGTGGGTTACGT | + |
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Preference number: 3 (lower is better) Translates to: GEVRPLVRSERN*QASPPTGGGLR Trigger: ACGTAACCCACCACCCGTTGGAGGAGATGCCTGCCAGTTCCTCTCAGATCTCACTAGAGGGCGCACCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR GCA 72 bp | AGTTCCTGTAACTCCAGTTCCAGGGCATGTCTGCAATaGCCCCTCCTGGCCTCTGCAGGCACTGCGTGCAAG | + |
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Preference number: 3 (lower is better) Translates to: SSCNSSSRACLQ*PLLASAGTACK Trigger: CTTGCACGCAGTGCCTGCAGAGGCCAGGAGGGGGCATTGCAGACATGCCCTGGAACTGGAGTTACAGGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR-3UTR CAA 90 bp | CTGAGCCTCCTCCTCGGAGGGGCGGTGGTGATTCTCCACTATACTCGGCCCAGCTGCCCATCAATTTCCTaGGCTTCTCTTGGCCATTTG | + |
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Preference number: 3 (lower is better) Translates to: LSLLLGGAVVILHYTRPSCPSIS*ASLGHL Trigger: CAAATGGCCAAGAGAAGCCAAGGAAATTGATGGGCA...GCTGGGCCGAGTATAGTGGAGAATCACCACCGCCCCTCCGAGGAGGAGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR GCA 72 bp | GCTTGTCCCTGCGGGACGACAAGGGGGCACCCCATGTaGCTTTGCTCTAGAGAATGGATTTCTCAGGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: ACPCGTTRGHPM*LCSREWISQEN Trigger: GTTCTCCTGAGAAATCCATTCTCTAGAGCAAAGGCACATGGGGTGCCCCCTTGTCGTCCCGCAGGGACAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR GCA 72 bp | CTGCAATGCCCCCTCCTGGCCTCTGCAGGCACTGCGTaGAAGTGGTTCACAGACATACAATCAGGCAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: LQCPLLASAGTA*KWFTDIQSGKV Trigger: TACTTTGCCTGATTGTATGTCTGTGAACCACTTGCACGCAGTGCCTGCAGAGGCCAGGAGGGGGCATTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR GCA 72 bp | CCCTGCGGGACGACAAGGGGGCACCCCATGTGCCTTTaGTCTAGAGAATGGATTTCTCAGGAGAACTGTAAA | + |
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Preference number: 3 (lower is better) Translates to: PCGTTRGHPMCL*SREWISQENCK Trigger: TTTACAGTTCTCCTGAGAAATCCATTCTCTAGAGCAAAGGCACATGGGGTGCCCCCTTGTCGTCCCGCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR-3UTR CAA 90 bp | CGGCCCAGCGCCCTTCGCTCCTTTCTGGATCTAAGTGTCAAAGACTGTAGCAACGATTTCTACCCCTCTTaGGGACCCCATAGACCTGAA | + |
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Preference number: 3 (lower is better) Translates to: RPSALRSFLDLSVKDCSNDFYPS*GPHRPE Trigger: TTCAGGTCTATGGGGTCCCAAAGAGGGGTAGAAATC...GTTGCTACAGTCTTTGACACTTAGATCCAGAAAGGAGCGAAGGGCGCTGGGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR TCA 72 bp | GTTGGCACCTTGACGAGGCAAAGCTTTCAAGAAGGTTaGTGCTGTGCAGACATAGCCACCCCTGTGCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: VGTLTRQSFQEG*CCADIATPVLS Trigger: TGACAGCACAGGGGTGGCTATGTCTGCACAGCATCAACCTTCTTGAAAGCTTTGCCTCGTCAAGGTGCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR CCA 72 bp | TGCCCCCTCCTGGCCTCTGCAGGCACTGCGTGCAAGTaGTTCACAGACATACAATCAGGCAAAGTACTTATA | + |
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Preference number: 3 (lower is better) Translates to: CPLLASAGTACK*FTDIQSGKVLI Trigger: TATAAGTACTTTGCCTGATTGTATGTCTGTGAACCACTTGCACGCAGTGCCTGCAGAGGCCAGGAGGGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR CCA 72 bp | CTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTaGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: LKPTSWTVLLVL*GSNNVWRQSGN Trigger: GTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| 3UTR TCA 72 bp | TGTGCTGTCACCACGACAACGGTTTCTGGGCATGTCTaGCATCTCTTCAGAGCCTTAGCACTTTTGTTCATT | + |
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Preference number: 3 (lower is better) Translates to: CAVTTTTVSGHV*HLFRALALLFI Trigger: AATGAACAAAAGTGCTAAGGCTCTGAAGAGATGTCAGACATGCCCAGAAACCGTTGTCGTGGTGACAGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTATGTACATTCAGGTGCTGAGAAGCCTGAGAAACACAGTAGGGCTCTGGGGCTTTTATGTTTGTATTaGAGAGCTAAGAGAGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: LYVHSGAEKPEKHSRALGLLCLY*RAKREV Trigger: GACCTCTCTCTTAGCTCTCAAATACAAACATAAAAG...CCCCAGAGCCCTACTGTGTTTCTCAGGCTTCTCAGCACCTGAATGTACATACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR CCA 72 bp | ATGGATGCTGAGGATGCCCAATGTATTTGTTATGAGTaGAAGGTTGGCACCTTGACGAGGCAAAGCTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: MDAEDAQCICYE*KVGTLTRQSFQ Trigger: TTGAAAGCTTTGCCTCGTCAAGGTGCCAACCTTCCACTCATAACAAATACATTGGGCATCCTCAGCATCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR CCA 72 bp | AAAATTCCCATGCCCATCAATTTCCTTGGCTTCTCTTaGCCATTTGGAGCTACAACCTTGAGAAACTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: KIPMPINFLGFS*PFGATTLRNSS Trigger: AGAGGAGTTTCTCAAGGTTGTAGCTCCAAATGGCCAAGAGAAGCCAAGGAAATTGATGGGCATGGGAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGACATACAATCAGGCAAAGTACTTATACACATTATACCTACCCTGGGACTTACAGTTCTGCTGGTTTaGTGGGGCTCCAATAATGTC | + |
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Preference number: 3 (lower is better) Translates to: TDIQSGKVLIHIIPTLGLTVLLV*WGSNNV Trigger: GACATTATTGGAGCCCCACAAAACCAGCAGAACTGT...AAGTCCCAGGGTAGGTATAATGTGTATAAGTACTTTGCCTGATTGTATGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| CDS-3UTR TCA 90 bp | ATCCTGAGCCTCCTCCTCGGAGGGGCGGTGGTGATTCTCCACTATACTCGGCCCCTCAGAGGAAGCCACTaGCATGGGAATGTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: ILSLLLGGAVVILHYTRPLRGSH*HGNVLG Trigger: ACCCAGGACATTCCCATGTCAGTGGCTTCCTCTGAG...GGGCCGAGTATAGTGGAGAATCACCACCGCCCCTCCGAGGAGGAGGCTCAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| CDS-3UTR GCA 90 bp | ATCCTGAGCCTCCTCCTCGGAGGGGCGGTGGTGATTCTCCACTATACTCGGCCCCTTTGCATACTCCTCTaGATAGCTCCTGCCCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: ILSLLLGGAVVILHYTRPLCILL*IAPAQA Trigger: CGCCTGGGCAGGAGCTATGCAGAGGAGTATGCAAAG...GGGCCGAGTATAGTGGAGAATCACCACCGCCCCTCCGAGGAGGAGGCTCAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| CDS-3UTR TCA 90 bp | GCGGGACGACAAGGGGGCACCCCATGTGCCTTTGCTCTAGAGAATGGATTTCTCAAAGCGGGCCCATGGTaGGTGTGCAGCACAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: AGRQGGTPCAFALENGFLKAGPW*VCSTAV Trigger: CACTGCTGTGCTGCACACTCACCATGGGCCCGCTTT...GAGAAATCCATTCTCTAGAGCAAAGGCACATGGGGTGCCCCCTTGTCGTCCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| CDS-3UTR TCA 90 bp | GCGGGACGACAAGGGGGCACCCCATGTGCCTTTGCTCTAGAGAATGGATTTCTCTGTGGGCCACTGCCATaGCCAGGCCAAGCAGAATAC | + |
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Preference number: 4 (lower is better) Translates to: AGRQGGTPCAFALENGFLCGPLP*PGQAEY Trigger: GTATTCTGCTTGGCCTGGTCATGGCAGTGGCCCACA...GAGAAATCCATTCTCTAGAGCAAAGGCACATGGGGTGCCCCCTTGTCGTCCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| CDS-3UTR GCA 90 bp | CTGAGCCTCCTCCTCGGAGGGGCGGTGGTGATTCTCCACTATACTCGGCCCAGCGATGAAGGTGACCAGTaGAGTCAGGAAGATGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LSLLLGGAVVILHYTRPSDEGDQ*SQEDGD Trigger: ATCACCATCTTCCTGACTGCACTGGTCACCTTCATC...GCTGGGCCGAGTATAGTGGAGAATCACCACCGCCCCTCCGAGGAGGAGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| CDS-3UTR GCA 90 bp | TGCTGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGTGTGCAGCACAGCAGTaGCCAAGCGCAGGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: CWFCGAPIMSGGSLETQWCAAQQ*PSAGDR Trigger: CCTGTCCCCTGCGCTTGGGCACTGCTGTGCTGCACA...CCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS-3UTR GCA 90 bp | GGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTACCAGGAGAAGATGTGCAGCACAGCAGTaGCCAAGCGCAGGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: GSNNVWRQSGNSVATRRRCAAQQ*PSAGDR Trigger: CCTGTCCCCTGCGCTTGGGCACTGCTGTGCTGCACA...TCTTCTCCTGGTAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS-3UTR GCA 90 bp | CATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGGCTCGCTGCTGCACTGGGGTaGCCAGGATCACAGCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: HDTTETHFLDSSAGFVGLAAALG*PGSQPR Trigger: TCGGGGCTGTGATCCTGGGCACCCCAGTGCAGCAGC...GAGCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| CDS-3UTR CCA 90 bp | ACCCCTGTGCTGTCACCACGACAACGGTTTCTGGGCATGTCTGACATCTCTTCAGCTGGAAGAGACCAGTaGCCAGCAGCATGTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TPVLSPRQRFLGMSDISSAGRDQ*PAACGH Trigger: GTGGCCACATGCTGCTGGCCACTGGTCTCTTCCAGC...TGAAGAGATGTCAGACATGCCCAGAAACCGTTGTCGTGGTGACAGCACAGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| CDS-3UTR CCA 90 bp | CGGCCCAGCGCCCTTCGCTCCTTTCTGGATCTAAGTGTCAAAGACTGTAGCAACATTCAGCTGCTGCACTaGGGTGCCCAGGATCACAGC | + |
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Preference number: 4 (lower is better) Translates to: RPSALRSFLDLSVKDCSNIQLLH*GAQDHS Trigger: GCTGTGATCCTGGGCACCCCAGTGCAGCAGCTGAAT...GTTGCTACAGTCTTTGACACTTAGATCCAGAAAGGAGCGAAGGGCGCTGGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| CDS-3UTR TCA 90 bp | TGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTACCAGGAAAAGCCTTCAGTCTGTaGGGCTGCATCCTGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: CGAPIMSGGSLETQWLPGKAFSL*GCILWA Trigger: GGCCCACAGGATGCAGCCTCACAGACTGAAGGCTTT...TCCTGGTAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS-3UTR CCA 90 bp | TGCTGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCCTGCCAGGCGGTACTaGTTGTACAGGCCACATGGG | + |
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Preference number: 4 (lower is better) Translates to: CWFCGAPIMSGGSLETQWPARRY*LYRPHG Trigger: CCCATGTGGCCTGTACAACCAGTACCGCCTGGCAGG...CCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS-3UTR TCA 90 bp | GGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTACCAGGAGAAGAGGATCACAGCCCCGATaGATAAGCTGGTCACCACCC | + |
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Preference number: 4 (lower is better) Translates to: GSNNVWRQSGNSVATRRRGSQPR*ISWSPP Trigger: GGGTGGTGACCAGCTTATTCATCGGGGCTGTGATCC...TCTTCTCCTGGTAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS-3UTR TCA 90 bp | CATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGGCTCAAAGCGGGCCCATGGTaGGTGTGCAGCACAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: HDTTETHFLDSSAGFVGLKAGPW*VCSTAV Trigger: CACTGCTGTGCTGCACACTCACCATGGGCCCGCTTT...GAGCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS-3UTR TCA 90 bp | TGCTGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGTGTGGGCCACTGCCATaGCCAGGCCAAGCAGAATAC | + |
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Preference number: 4 (lower is better) Translates to: CWFCGAPIMSGGSLETQWCGPLP*PGQAEY Trigger: GTATTCTGCTTGGCCTGGTCATGGCAGTGGCCCACA...CCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS-3UTR GCA 90 bp | TGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTACCAGGACTTTGCATACTCCTCTaGATAGCTCCTGCCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CGAPIMSGGSLETQWLPGLCILL*IAPAQA Trigger: CGCCTGGGCAGGAGCTATGCAGAGGAGTATGCAAAG...TCCTGGTAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR GCA 90 bp | CATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGGCTCCATCCTGTGGGCCACTaGCATGACCAGGCCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HDTTETHFLDSSAGFVGLHPVGH*HDQAKQ Trigger: CTGCTTGGCCTGGTCATGGCAGTGGCCCACAGGATG...GAGCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | CATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGGCTCCCTGCCAGGCGGTACTaGTTGTACAGGCCACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: HDTTETHFLDSSAGFVGLPARRY*LYRPHG Trigger: CCCATGTGGCCTGTACAACCAGTACCGCCTGGCAGG...GAGCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTAGCTGGAAGAGACCAGTaGCCAGCAGCATGTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WFCGAPIMSGGSLETQWLAGRDQ*PAACGH Trigger: GTGGCCACATGCTGCTGGCCACTGGTCTCTTCCAGC...TAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCAGGACTCTCAGCTATaGACCGGTAGTGGGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CWFCGAPIMSGGSLETQWQDSQL*TGSGGS Trigger: TGAGCCCCCACTACCGGTCCATAGCTGAGAGTCCTG...CCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| 3UTR CAA 72 bp | GGTTGGCACCTTGACGAGGCAAAGCTTTCAAGAAGGTaGATGCTGTGCAGACATAGCCACCCCTGTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GWHLDEAKLSRR*MLCRHSHPCAV Trigger: GACAGCACAGGGGTGGCTATGTCTGCACAGCATCAACCTTCTTGAAAGCTTTGCCTCGTCAAGGTGCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTAGGATCACAGCCCCGATaGATAAGCTGGTCACCACCC | + |
|
Preference number: 4 (lower is better) Translates to: WFCGAPIMSGGSLETQWLGSQPR*ISWSPP Trigger: GGGTGGTGACCAGCTTATTCATCGGGGCTGTGATCC...TAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGACGTTGTGTTGGCGTTaGCATGGCCCACAGACCACT | + |
|
Preference number: 4 (lower is better) Translates to: CWFCGAPIMSGGSLETQWTLCWR*HGPQTT Trigger: AGTGGTCTGTGGGCCATGTCAACGCCAACACAACGT...CCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110537.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTACCAGGAAGGAAGCCACTGACATaGGAATGTCCTGGGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGAPIMSGGSLETQWLPGRKPLT*ECPGSQ Trigger: CTGAGACCCAGGACATTCCCATGTCAGTGGCTTCCT...TCCTGGTAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR GCA 90 bp | CATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGGCTCGTTTCATTCAGCTGCTaGACTGGGGTGCCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HDTTETHFLDSSAGFVGLVSFSC*TGVPVR Trigger: CCTCACAGGCACCCCAGTGCAGCAGCTGAATGAAAC...GAGCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110537.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTACCAGGACAGGCGCCATGCGAATaGCTCATTGTAGTTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: CGAPIMSGGSLETQWLPGQAPCE*LIVVDG Trigger: ACCATCAACTACAATGAGGCATTCGCATGGCGCCTG...TCCTGGTAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAGAGATGGTTCAGTGGTAGAACACTAGCTGCCCTTTCAGGTATTGGTATTCATCCTGTGGGCCACTaGCATGACCAGGCCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LERWFSGRTLAALSGIGIHPVGH*HDQAKQ Trigger: CTGCTTGGCCTGGTCATGGCAGTGGCCCACAGGATG...AATACCAATACCTGAAAGGGCAGCTAGTGTTCTACCACTGAACCATCTCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTACCAGGATCGACAACATCACATTaGCCAGTAGCCAGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGAPIMSGGSLETQWLPGSTTSH*PVASRG Trigger: TCCTCTGCTGGCTACTGGCCAATGTGATGTTGTCGA...TCCTGGTAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | AACATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGGCAACAGGGCCAACAGCTaGAAGAGACCAGTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NMIQLKPTSWTVLLVLWGNRANS*KRPVAS Trigger: GCTGGCCACTGGTCTCTTCCAGCTGTTGGCCCTGTT...GCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGTGATTCTCCACTATACTCGGCCCAGCGCCCTTCGCTCCTTTCTGGATCTATGCCTCATTGTAGTTaGTGGTTTCATTCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGDSPLYSAQRPSLLSGSMPHCS*WFHSAA Trigger: AGCAGCTGAATGAAACCATCAACTACAATGAGGCAT...AGATCCAGAAAGGAGCGAAGGGCGCTGGGCCGAGTATAGTGGAGAATCACCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
||
| CDS-3UTR GCA 90 bp | CATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGGCTCATGGTTTCATTCAGCTaGTGCACTGGGGTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HDTTETHFLDSSAGFVGLMVSFS*CTGVPV Trigger: CACAGGCACCCCAGTGCAGCAGCTGAATGAAACCAT...GAGCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110537.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGTTGGAAAGGTTGGCTTaGTGCCAGTGTAGAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CWFCGAPIMSGGSLETQWLERLA*CQCRRA Trigger: TGCCCTTCTACACTGGCACCAAGCCAACCTTTCCAA...CCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTAGTGTTGGCGTTGACATaGCCCACAGACCACTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WFCGAPIMSGGSLETQWLVLALT*PTDHSE Trigger: TTCTGAGTGGTCTGTGGGCCATGTCAACGCCAACAC...TAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110537.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTAGACATGGGAATGTCCTaGGTCTCAGGACTCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WFCGAPIMSGGSLETQWLDMGMS*VSGLSA Trigger: AGCTGAGAGTCCTGAGACCCAGGACATTCCCATGTC...TAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTACCAGGAGAAGACCTCTGAACTCTGGTTaGAGAAAGCCTTCAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSNNVWRQSGNSVATRRRPLNSG*RKPSVC Trigger: ACAGACTGAAGGCTTTCTTCAACCAGAGTTCAGAGG...TCTTCTCCTGGTAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR TCA 90 bp | CTGAACATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGCTCAGAGGAAGCCACTaGCATGGGAATGTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNMIQLKPTSWTVLLVLWLRGSH*HGNVLG Trigger: ACCCAGGACATTCCCATGTCAGTGGCTTCCTCTGAG...CCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR GCA 90 bp | CATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGGCTCCAGGCGCCATGCGAATaGCTCATTGTAGTTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HDTTETHFLDSSAGFVGLQAPCE*LIVVDG Trigger: ACCATCAACTACAATGAGGCATTCGCATGGCGCCTG...GAGCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTACTTCTCCAGGGCCTTTaGATACTCCTCTGCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WFCGAPIMSGGSLETQWLLLQGL*ILLCIA Trigger: AGCTATGCAGAGGAGTATGCAAAGGCCCTGGAGAAG...TAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR GCA 90 bp | AACATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGGCAGAGGCATAGTGTCCTaGCAGGCGGTACTGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NMIQLKPTSWTVLLVLWGRGIVS*QAVLVV Trigger: TACAACCAGTACCGCCTGGCAGGACACTATGCCTCT...GCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | CATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGGCTCCAGAGTAGTGTCCATTaGAAAGGTTGGCTTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HDTTETHFLDSSAGFVGLQSSVH*KGWLGA Trigger: GGCACCAAGCCAACCTTTCCAATGGACACTACTCTG...GAGCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGATTCAGCTGCTGCACTaGGGTGCCTGTGAGGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LNMIQLKPTSWTVLLVLWIQLLH*GACEGD Trigger: ATCACCCTCACAGGCACCCCAGTGCAGCAGCTGAAT...CCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110537.8 |
||
| CDS-3UTR CCA 90 bp | TCCCATGCCCATCAATTTCCTTGGCTTCTCTTGGCCATTTGGAGCTACAACCTTGACATGGGAATGTCCTaGGTCTCAGGACTCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHAHQFPWLLLAIWSYNLDMGMS*VSGLSA Trigger: AGCTGAGAGTCCTGAGACCCAGGACATTCCCATGTC...AAGGTTGTAGCTCCAAATGGCCAAGAGAAGCCAAGGAAATTGATGGGCATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | TCCCATGCCCATCAATTTCCTTGGCTTCTCTTGGCCATTTGGAGCTACAACCTTAGGAAGCCACTGACATaGGAATGTCCTGGGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHAHQFPWLLLAIWSYNLRKPLT*ECPGSQ Trigger: CTGAGACCCAGGACATTCCCATGTCAGTGGCTTCCT...AAGGTTGTAGCTCCAAATGGCCAAGAGAAGCCAAGGAAATTGATGGGCATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
||
| CDS-3UTR GCA 90 bp | CTGAACATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGAAAGGTTGGCTTGGTaGCAGTGTAGAAGGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNMIQLKPTSWTVLLVLWERLAW*QCRRAV Trigger: CACTGCCCTTCTACACTGGCACCAAGCCAACCTTTC...CCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATGTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTAGGGTCCTCTGAACTCTaGTTGAAGAAAGCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WFCGAPIMSGGSLETQWLGSSEL*LKKAFS Trigger: ACTGAAGGCTTTCTTCAACCAGAGTTCAGAGGACCC...TAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTTCAAAATTCCCATGCCCATCAATTTCCTTGGCTTCTCTTGGCCATTTGAAAGCCTTCAGTCTGTaGGGCTGCATCCTGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSSKFPCPSISLASLGHLKAFSL*GCILWA Trigger: GGCCCACAGGATGCAGCCTCACAGACTGAAGGCTTT...CAAATGGCCAAGAGAAGCCAAGGAAATTGATGGGCATGGGAATTTTGAAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
||
| CDS-3UTR TCA 90 bp | AACATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGGCCCTCTGAACTCTGGTTaGAGAAAGCCTTCAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NMIQLKPTSWTVLLVLWGPLNSG*RKPSVC Trigger: ACAGACTGAAGGCTTTCTTCAACCAGAGTTCAGAGG...GCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAACATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGAAAGGTTGGCTTGGTaGCAGTGTAGAAGGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TEHDTTETHFLDSSAGFVERLAW*QCRRAV Trigger: CACTGCCCTTCTACACTGGCACCAAGCCAACCTTTC...CACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATGTTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR GCA 90 bp | AACATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGGCGATGAAGGTGACCAGTaGAGTCAGGAAGATGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NMIQLKPTSWTVLLVLWGDEGDQ*SQEDGD Trigger: ATCACCATCTTCCTGACTGCACTGGTCACCTTCATC...GCCCCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | CACAGACATACAATCAGGCAAAGTACTTATACACATTATACCTACCCTGGGACTAACAGGGCCAACAGCTaGAAGAGACCAGTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRHTIRQSTYTHYTYPGTNRANS*KRPVAS Trigger: GCTGGCCACTGGTCTCTTCCAGCTGTTGGCCCTGTT...AGTCCCAGGGTAGGTATAATGTGTATAAGTACTTTGCCTGATTGTATGTCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | CACAGACATACAATCAGGCAAAGTACTTATACACATTATACCTACCCTGGGACTCAGGACTCTCAGCTATaGACCGGTAGTGGGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HRHTIRQSTYTHYTYPGTQDSQL*TGSGGS Trigger: TGAGCCCCCACTACCGGTCCATAGCTGAGAGTCCTG...AGTCCCAGGGTAGGTATAATGTGTATAAGTACTTTGCCTGATTGTATGTCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTAATGCCTCATTGTAGTTaGTGGTTTCATTCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WFCGAPIMSGGSLETQWLMPHCS*WFHSAA Trigger: AGCAGCTGAATGAAACCATCAACTACAATGAGGCAT...TAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAACATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGCTTCTCCAGGGCCTTTaGATACTCCTCTGCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TEHDTTETHFLDSSAGFVLLQGL*ILLCIA Trigger: AGCTATGCAGAGGAGTATGCAAAGGCCCTGGAGAAG...CACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATGTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTTCAAAATTCCCATGCCCATCAATTTCCTTGGCTTCTCTTGGCCATTTGGTTTCATTCAGCTGCTaGACTGGGGTGCCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: FSSKFPCPSISLASLGHLVSFSC*TGVPRI Trigger: GATCCTGGGCACCCCAGTGCAGCAGCTGAATGAAAC...CAAATGGCCAAGAGAAGCCAAGGAAATTGATGGGCATGGGAATTTTGAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
||
| CDS-3UTR GCA 90 bp | CACAGACATACAATCAGGCAAAGTACTTATACACATTATACCTACCCTGGGACTATGGTTTCATTCAGCTaGTGCACTGGGGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRHTIRQSTYTHYTYPGTMVSFS*CTGVPR Trigger: CCTGGGCACCCCAGTGCAGCAGCTGAATGAAACCAT...AGTCCCAGGGTAGGTATAATGTGTATAAGTACTTTGCCTGATTGTATGTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAACATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGTTGGAAAGGTTGGCTTaGTGCCAGTGTAGAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TEHDTTETHFLDSSAGFVLERLA*CQCRRA Trigger: TGCCCTTCTACACTGGCACCAAGCCAACCTTTCCAA...CACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATGTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGGTCCATTGGAAAGGTTaGCTTGGTGCCAGTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNMIQLKPTSWTVLLVLWVHWKG*LGASVE Trigger: TTCTACACTGGCACCAAGCCAACCTTTCCAATGGAC...CCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATGTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAGAGATGGTTCAGTGGTAGAACACTAGCTGCCCTTTCAGGTATTGGTATTGTCCATTGGAAAGGTTaGCTTGGTGCCAGTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LERWFSGRTLAALSGIGIVHWKG*LGASVE Trigger: TTCTACACTGGCACCAAGCCAACCTTTCCAATGGAC...AATACCAATACCTGAAAGGGCAGCTAGTGTTCTACCACTGAACCATCTCTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
||
| 3UTR CAA 72 bp | CAAAATTCCCATGCCCATCAATTTCCTTGGCTTCTCTaGGCCATTTGGAGCTACAACCTTGAGAAACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QNSHAHQFPWLL*AIWSYNLEKLL Trigger: GAGGAGTTTCTCAAGGTTGTAGCTCCAAATGGCCAAGAGAAGCCAAGGAAATTGATGGGCATGGGAATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTCAAAATTCCCATGCCCATCAATTTCCTTGGCTTCTCTTGGCCATTTGTCGACAACATCACATTaGCCAGTAGCCAGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSSKFPCPSISLASLGHLSTTSH*PVASRG Trigger: TCCTCTGCTGGCTACTGGCCAATGTGATGTTGTCGA...CAAATGGCCAAGAGAAGCCAAGGAAATTGATGGGCATGGGAATTTTGAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACATACAATCAGGCAAAGTACTTATACACATTATACCTACCCTGGGACTTGGGTCCTCTGAACTCTaGTTGAAGAAAGCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TDIQSGKVLIHIIPTLGLGSSEL*LKKAFS Trigger: ACTGAAGGCTTTCTTCAACCAGAGTTCAGAGGACCC...AAGTCCCAGGGTAGGTATAATGTGTATAAGTACTTTGCCTGATTGTATGTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| 3UTR CAA 72 bp | CTAGCCACACTGAATGTATTGGGGAAGATTAGGATTTaGGCGTTCATTCGCAAATTCTTTCAGGTTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LATLNVLGKIRI*AFIRKFFQVVF Trigger: GAAGACAACCTGAAAGAATTTGCGAATGAACGCCAAAATCCTAATCTTCCCCAATACATTCAGTGTGGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| CDS GCA 90 bp | ACTGGGGTGCCTGTGAGGGTGATGTTGACGCCGCCGAGCCCGATCTaGAGTCCCACGTCCACACTGACCCACTTGGGACTGAAGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGVPVRVMLTPPSPI*SPTSTLTHLGLKAL Trigger: CAAAGCCTTCAGTCCCAAGTGGGTCAGTGTGGACGTGGGACTGCAGATCGGGCTCGGCGGCGTCAACATCACCCTCACAGGCACCCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000147788.8 ENSMUST00000148417.8 |
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| CDS TCA 90 bp | GTGCAGCACAGCAGTGCCCAAGCGCAGGGGACAGGGCGATATGAGTaGCGTGGTCATGGAGAAGAAGAACAGGGCCAACAGCTGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: VQHSSAQAQGTGRYE*RGHGEEEQGQQLEE Trigger: CTCTTCCAGCTGTTGGCCCTGTTCTTCTTCTCCATGACCACGTCACTCATATCGCCCTGTCCCCTGCGCTTGGGCACTGCTGTGCTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS CCA 90 bp | AAGCCACTGACATGGGAATGTCCTGGGTCTCAGGACTCTCAGCTATaGACCGGTAGTGGGGGCTCAAGAGTCCTCCTTCTTCAGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KPLTWECPGSQDSQL*TGSGGSRVLLLQSP Trigger: GGGGCTCTGAAGAAGGAGGACTCTTGAGCCCCCACTACCGGTCCATAGCTGAGAGTCCTGAGACCCAGGACATTCCCATGTCAGTGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS-3UTR CAA 90 bp | ATCCTGAGCCTCCTCCTCGGAGGGGCGGTGGTGATTCTCCACTATACTCGGCCCTGTCCATTGGAAAGGTaGGCTTGGTGCCAGTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: ILSLLLGGAVVILHYTRPCPLER*AWCQCR Trigger: TCTACACTGGCACCAAGCCAACCTTTCCAATGGACA...GGGCCGAGTATAGTGGAGAATCACCACCGCCCCTCCGAGGAGGAGGCTCAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| CDS CCA 90 bp | GCATGTGGCCACCATAAACCAGCACTGGCATCGACAACATCACATTaGCCAGTAGCCAGCAGAGGAATGCCACCCACAGCATGGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ACGHHKPALASTTSH*PVASRGMPPTAWQR Trigger: CCTCTGCCATGCTGTGGGTGGCATTCCTCTGCTGGCTACTGGCCAATGTGATGTTGTCGATGCCAGTGCTGGTTTATGGTGGCCACATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 ENSMUST00000148417.8 |
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| CDS TCA 90 bp | CAAGAGTCCTCCTTCTTCAGAGCCCCACTCCAGCACTGGGTCCTCTaGACTCTGGTTGAAGAAAGCCTTCAGTCTGTGAGGCTGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: QESSFFRAPLQHWVL*TLVEESLQSVRLHP Trigger: AGGATGCAGCCTCACAGACTGAAGGCTTTCTTCAACCAGAGTTCAGAGGACCCAGTGCTGGAGTGGGGCTCTGAAGAAGGAGGACTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS GCA 90 bp | CAGGGCCTTTGCATACTCCTCTGCATAGCTCCTGCCCAGGCGCCATaGGAATGCCTCATTGTAGTTGATGGTTTCATTCAGCTGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QGLCILLCIAPAQAP*ECLIVVDGFIQLLH Trigger: GTGCAGCAGCTGAATGAAACCATCAACTACAATGAGGCATTCGCATGGCGCCTGGGCAGGAGCTATGCAGAGGAGTATGCAAAGGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 ENSMUST00000148417.8 |
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| CDS-3UTR CAA 90 bp | TGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTACCAGGACCTTCTCCAGGGCCTTaGCATACTCCTCTGCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: CGAPIMSGGSLETQWLPGPSPGP*HTPLHS Trigger: GCTATGCAGAGGAGTATGCAAAGGCCCTGGAGAAGG...TCCTGGTAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS-3UTR CAA 90 bp | GGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGCTACCAGGAGAAGATACGTTGTGTTGGCGTaGACATGGCCCACAGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSNNVWRQSGNSVATRRRYVVLA*TWPTDH Trigger: GTGGTCTGTGGGCCATGTCAACGCCAACACAACGTA...TCTTCTCCTGGTAGCCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110537.8 |
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| CDS-3UTR CAA 90 bp | CTGTATGTACATTCAGGTGCTGAGAAGCCTGAGAAACACAGTAGGGCTCTGGGGCCTTCTCCAGGGCCTTaGCATACTCCTCTGCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYVHSGAEKPEKHSRALGPSPGP*HTPLHS Trigger: GCTATGCAGAGGAGTATGCAAAGGCCCTGGAGAAGG...CCCCAGAGCCCTACTGTGTTTCTCAGGCTTCTCAGCACCTGAATGTACATACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| CDS TCA 90 bp | CTCTTTGGGGTGTTCCTCCTTAAAACATGTCTCAGAGGAAGCCACTaGCATGGGAATGTCCTGGGTCTCAGGACTCTCAGCTATGGACCG | + |
|
Preference number: 5 (lower is better) Translates to: LFGVFLLKTCLRGSH*HGNVLGLRTLSYGP Trigger: CGGTCCATAGCTGAGAGTCCTGAGACCCAGGACATTCCCATGTCAGTGGCTTCCTCTGAGACATGTTTTAAGGAGGAACACCCCAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS GCA 90 bp | CGTCTTCCCACGGATGCCAGGCAGGATAATGATGAAGGTGACCAGTaGAGTCAGGAAGATGGTGATAATGACAGCCAGAGTAGTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RLPTDARQDNDEGDQ*SQEDGDNDSQSSVH Trigger: ATGGACACTACTCTGGCTGTCATTATCACCATCTTCCTGACTGCACTGGTCACCTTCATCATTATCCTGCCTGGCATCCGTGGGAAGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 ENSMUST00000147788.8 ENSMUST00000148417.8 ENSMUST00000154412.2 |
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| CDS CCA 90 bp | TGCAGTCAGGAAGATGGTGATAATGACAGCCAGAGTAGTGTCCATTaGAAAGGTTGGCTTGGTGCCAGTGTAGAAGGGCAGTGTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSQEDGDNDSQSSVH*KGWLGASVEGQCVS Trigger: GGACACACACTGCCCTTCTACACTGGCACCAAGCCAACCTTTCCAATGGACACTACTCTGGCTGTCATTATCACCATCTTCCTGACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 ENSMUST00000147788.8 ENSMUST00000148417.8 ENSMUST00000154412.2 |
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| CDS-3UTR CAA 90 bp | TGCTGGTTTTGTGGGGCTCCAATAATGTCTGGAGGCAGTCTGGAAACTCAGTGGTGTCCATTGGAAAGGTaGGCTTGGTGCCAGTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: CWFCGAPIMSGGSLETQWCPLER*AWCQCR Trigger: TCTACACTGGCACCAAGCCAACCTTTCCAATGGACA...CCACTGAGTTTCCAGACTGCCTCCAGACATTATTGGAGCCCCACAAAACCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS-3UTR CAA 90 bp | CTGAACATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGGATCGACAACATCACATaGGCCAGTAGCCAGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LNMIQLKPTSWTVLLVLWIDNIT*ASSQQR Trigger: CCTCTGCTGGCTACTGGCCAATGTGATGTTGTCGAT...CCACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATGTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS-3UTR CAA 90 bp | ACTGAACATGATACAACTGAAACCCACTTCCTGGACAGTTCTGCTGGTTTTGTGATCGACAACATCACATaGGCCAGTAGCCAGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TEHDTTETHFLDSSAGFVIDNIT*ASSQQR Trigger: CCTCTGCTGGCTACTGGCCAATGTGATGTTGTCGAT...CACAAAACCAGCAGAACTGTCCAGGAAGTGGGTTTCAGTTGTATCATGTTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS CAA 72 bp | TTCAGCTGCTGCACTGGGGTGCCTGTGAGGGTGATGTaGACGCCGCCGAGCCCGATCTGCAGTCCCACGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FSCCTGVPVRVM*TPPSPICSPTS Trigger: GGACGTGGGACTGCAGATCGGGCTCGGCGGCGTCAACATCACCCTCACAGGCACCCCAGTGCAGCAGCTGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000147788.8 ENSMUST00000148417.8 |
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| CDS GCA 72 bp | CCTGTGAGGGTGATGTTGACGCCGCCGAGCCCGATCTaGAGTCCCACGTCCACACTGACCCACTTGGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: PVRVMLTPPSPI*SPTSTLTHLGL Trigger: CAGTCCCAAGTGGGTCAGTGTGGACGTGGGACTGCAGATCGGGCTCGGCGGCGTCAACATCACCCTCACAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000147788.8 ENSMUST00000148417.8 |
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| CDS CAA 90 bp | ACGCCGCCGAGCCCGATCTGCAGTCCCACGTCCACACTGACCCACTaGGGACTGAAGGCTTTGTACGTTGTGTTGGCGTTGACATGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TPPSPICSPTSTLTH*GLKALYVVLALTWP Trigger: GGGCCATGTCAACGCCAACACAACGTACAAAGCCTTCAGTCCCAAGTGGGTCAGTGTGGACGTGGGACTGCAGATCGGGCTCGGCGGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000147788.8 ENSMUST00000148417.8 |
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| CDS TCA 72 bp | GCTGCTGCACTGGGGTGCCCAGGATCACAGCCCCGATaGATAAGCTGGTCACCACCCGAAGCAGCCAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: AAALGCPGSQPR*ISWSPPEAART Trigger: TGTTCTGGCTGCTTCGGGTGGTGACCAGCTTATTCATCGGGGCTGTGATCCTGGGCACCCCAGTGCAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110538.8 |
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| CDS GCA 72 bp | TGGAAGGCCCTTCTCCAGGGCCTTTGCATACTCCTCTaGATAGCTCCTGCCCAGGCGCCATGCGAATGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WKALLQGLCILL*IAPAQAPCECL Trigger: GAGGCATTCGCATGGCGCCTGGGCAGGAGCTATGCAGAGGAGTATGCAAAGGCCCTGGAGAAGGGCCTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 ENSMUST00000148417.8 |
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| CDS TCA 72 bp | GCACAGCAGTGCCCAAGCGCAGGGGACAGGGCGATATaGGTGACGTGGTCATGGAGAAGAAGAACAGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AQQCPSAGDRAI*VTWSWRRRTGP Trigger: TGGCCCTGTTCTTCTTCTCCATGACCACGTCACTCATATCGCCCTGTCCCCTGCGCTTGGGCACTGCTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS TCA 72 bp | AGCAGTGCCCAAGCGCAGGGGACAGGGCGATATGAGTaGCGTGGTCATGGAGAAGAAGAACAGGGCCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: SSAQAQGTGRYE*RGHGEEEQGQQ Trigger: CTGTTGGCCCTGTTCTTCTTCTCCATGACCACGTCACTCATATCGCCCTGTCCCCTGCGCTTGGGCACTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS GCA 72 bp | AGCCTTCAGTCTGTGAGGCTGCATCCTGTGGGCCACTaGCATGACCAGGCCAAGCAGAATACACAGCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLQSVRLHPVGH*HDQAKQNTQQS Trigger: GGACTGCTGTGTATTCTGCTTGGCCTGGTCATGGCAGTGGCCCACAGGATGCAGCCTCACAGACTGAAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS TCA 72 bp | GGCCAAGCAGAATACACAGCAGTCCTGTGGCTAACGTaGTCCAGAAAGCGGGCCCATGGTGAGTGTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GQAEYTAVLWLT*SRKRAHGECAA Trigger: TGCTGCACACTCACCATGGGCCCGCTTTCTGGATCACGTTAGCCACAGGACTGCTGTGTATTCTGCTTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS CAA 72 bp | CCCACGTCCACACTGACCCACTTGGGACTGAAGGCTTaGTACGTTGTGTTGGCGTTGACATGGCCCACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PTSTLTHLGLKA*YVVLALTWPTD Trigger: GTCTGTGGGCCATGTCAACGCCAACACAACGTACAAAGCCTTCAGTCCCAAGTGGGTCAGTGTGGACGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000147788.8 ENSMUST00000148417.8 ENSMUST00000154412.2 |
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| CDS CCA 72 bp | ACATGGGAATGTCCTGGGTCTCAGGACTCTCAGCTATaGACCGGTAGTGGGGGCTCAAGAGTCCTCCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: TWECPGSQDSQL*TGSGGSRVLLL Trigger: AAGAAGGAGGACTCTTGAGCCCCCACTACCGGTCCATAGCTGAGAGTCCTGAGACCCAGGACATTCCCATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS CAA 90 bp | ATCTGCAGTCCCACGTCCACACTGACCCACTTGGGACTGAAGGCTTaGTACGTTGTGTTGGCGTTGACATGGCCCACAGACCACTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ICSPTSTLTHLGLKA*YVVLALTWPTDHSE Trigger: TTCTGAGTGGTCTGTGGGCCATGTCAACGCCAACACAACGTACAAAGCCTTCAGTCCCAAGTGGGTCAGTGTGGACGTGGGACTGCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000147788.8 ENSMUST00000148417.8 |
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| CDS TCA 72 bp | TCCTTCTTCAGAGCCCCACTCCAGCACTGGGTCCTCTaGACTCTGGTTGAAGAAAGCCTTCAGTCTGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SFFRAPLQHWVL*TLVEESLQSVR Trigger: CCTCACAGACTGAAGGCTTTCTTCAACCAGAGTTCAGAGGACCCAGTGCTGGAGTGGGGCTCTGAAGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS GCA 72 bp | CTCCTCTGCATAGCTCCTGCCCAGGCGCCATGCGAATaGCTCATTGTAGTTGATGGTTTCATTCAGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLCIAPAQAPCE*LIVVDGFIQLL Trigger: CAGCAGCTGAATGAAACCATCAACTACAATGAGGCATTCGCATGGCGCCTGGGCAGGAGCTATGCAGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 ENSMUST00000148417.8 |
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| CDS CCA 72 bp | CACCATAAACCAGCACTGGCATCGACAACATCACATTaGCCAGTAGCCAGCAGAGGAATGCCACCCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HHKPALASTTSH*PVASRGMPPTA Trigger: TGCTGTGGGTGGCATTCCTCTGCTGGCTACTGGCCAATGTGATGTTGTCGATGCCAGTGCTGGTTTATGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 ENSMUST00000148417.8 |
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| CDS TCA 72 bp | GTGTTCCTCCTTAAAACATGTCTCAGAGGAAGCCACTaGCATGGGAATGTCCTGGGTCTCAGGACTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VFLLKTCLRGSH*HGNVLGLRTLS Trigger: GCTGAGAGTCCTGAGACCCAGGACATTCCCATGTCAGTGGCTTCCTCTGAGACATGTTTTAAGGAGGAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 |
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| CDS GCA 72 bp | TGCATACTCCTCTGCATAGCTCCTGCCCAGGCGCCATaGGAATGCCTCATTGTAGTTGATGGTTTCATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: CILLCIAPAQAP*ECLIVVDGFIQ Trigger: CTGAATGAAACCATCAACTACAATGAGGCATTCGCATGGCGCCTGGGCAGGAGCTATGCAGAGGAGTATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 ENSMUST00000148417.8 |
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| CDS CCA 72 bp | GATAATGACAGCCAGAGTAGTGTCCATTGGAAAGGTTaGCTTGGTGCCAGTGTAGAAGGGCAGTGTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: DNDSQSSVHWKG*LGASVEGQCVS Trigger: GGACACACACTGCCCTTCTACACTGGCACCAAGCCAACCTTTCCAATGGACACTACTCTGGCTGTCATTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 ENSMUST00000147788.8 ENSMUST00000148417.8 ENSMUST00000154412.2 |
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| CDS GCA 72 bp | ACGGATGCCAGGCAGGATAATGATGAAGGTGACCAGTaGAGTCAGGAAGATGGTGATAATGACAGCCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TDARQDNDEGDQ*SQEDGDNDSQS Trigger: ACTCTGGCTGTCATTATCACCATCTTCCTGACTGCACTGGTCACCTTCATCATTATCCTGCCTGGCATCCGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028653.14 ENSMUST00000110537.8 ENSMUST00000110538.8 ENSMUST00000147788.8 ENSMUST00000148417.8 ENSMUST00000154412.2 |
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