Pregenerated sensors for DUOX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033268Ensembl transcript IDs: ENSMUST00000099461.4
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCAGGTGGGAAGGGCCAAGGCTGAGGTGGCCAGAAATGAGTACTaGGTTAAGGCACAGGCCAAAGCCCCTGCTGTCCCAGCAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: WQVGRAKAEVARNEY*VKAQAKAPAVPAGQ Trigger: CTGCCCTGCTGGGACAGCAGGGGCTTTGGCCTGTGCCTTAACCCAGTACTCATTTCTGGCCACCTCAGCCTTGGCCCTTCCCACCTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR CCA 90 bp | ACTTGGACCAACCAAGTTGGCAGGTGGGAAGGGCCAAGGCTGAGGTaGCCAGAAATGAGTACTGGGTTAAGGCACAGGCCAAAGCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: TWTNQVGRWEGPRLR*PEMSTGLRHRPKPL Trigger: CAGGGGCTTTGGCCTGTGCCTTAACCCAGTACTCATTTCTGGCCACCTCAGCCTTGGCCCTTCCCACCTGCCAACTTGGTTGGTCCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR CCA 90 bp | AGCCTACACATGATGCCTGAGCGAGGCTACTTGGACCAACCAAGTTaGCAGGTGGGAAGGGCCAAGGCTGAGGTGGCCAGAAATGAGTAC | + |
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Preference number: 1 (lower is better) Translates to: SLHMMPERGYLDQPS*QVGRAKAEVARNEY Trigger: GTACTCATTTCTGGCCACCTCAGCCTTGGCCCTTCCCACCTGCCAACTTGGTTGGTCCAAGTAGCCTCGCTCAGGCATCATGTGTAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR TCA 90 bp | TCTCCCAACCATTTTGAAGAGAGGAAGAACACAGTGAAGAGGACTTaGAGACGCCAGCATCCATACTATCACTCAGACTCACTTTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: SPNHFEERKNTVKRT*RRQHPYYHSDSLSK Trigger: TTTTGAAAGTGAGTCTGAGTGATAGTATGGATGCTGGCGTCTTCAAGTCCTCTTCACTGTGTTCTTCCTCTCTTCAAAATGGTTGGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGACGCCAGCATCCATACTATCACTCAGACTCACTTTCAAAAACTTGACAGGTTGGACCAACCAAGTTaGCAGGTGGGAAGGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: EDASIHTITQTHFQKLDRLDQPS*QVGRAK Trigger: CTTGGCCCTTCCCACCTGCCAACTTGGTTGGTCCAA...CCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAGTATGGATGCTGGCGTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR-3UTR CCA 90 bp | TCACTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTACTGTCAAGTTTTTGCAACCAAGTTGGCAGGTaGGAAGGGCCAAGGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SLRLTFKNLTGCLLSSFCNQVGR*EGPRLR Trigger: CCTCAGCCTTGGCCCTTCCCACCTGCCAACTTGGTT...GCAAAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR CAA 90 bp | AAGACGCCAGCATCCATACTATCACTCAGACTCACTTTCAAAAACTaGACAGGTTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTG | + |
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Preference number: 2 (lower is better) Translates to: KTPASILSLRLTFKN*TGCLLSSFCLILTL Trigger: CAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAGTATGGATGCTGGCGTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR CAA 90 bp | AGCATCCATACTATCACTCAGACTCACTTTCAAAAACTTGACAGGTaGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACC | + |
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Preference number: 2 (lower is better) Translates to: SIHTITQTHFQKLDR*STVKFLLNSHFVST Trigger: GGTTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAGTATGGATGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR GCA 72 bp | AGACCACTAGAAGAGGGAGATGGGGCTGAGGGGCACTaGTCCAGGCGGTTAGTGGGCACAGAAAGGTCTGAC | + |
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Preference number: 3 (lower is better) Translates to: RPLEEGDGAEGH*SRRLVGTERSD Trigger: GTCAGACCTTTCTGTGCCCACTAACCGCCTGGAGCAGTGCCCCTCAGCCCCATCTCCCTCTTCTAGTGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR CCA 72 bp | ATGATGCCTGAGCGAGGCTACTTGGACCAACCAAGTTaGCAGGTGGGAAGGGCCAAGGCTGAGGTGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: MMPERGYLDQPS*QVGRAKAEVAR Trigger: TCTGGCCACCTCAGCCTTGGCCCTTCCCACCTGCCAACTTGGTTGGTCCAAGTAGCCTCGCTCAGGCATCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR-3UTR CAA 90 bp | GAACACAGTGAAGAGGACTTGAAGACGCCAGCATCCATACTATCACTCAGACTCCTTGGACCAACCAAGTaGGCAGGTGGGAAGGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: EHSEEDLKTPASILSLRLLGPTK*AGGKGQ Trigger: TTGGCCCTTCCCACCTGCCAACTTGGTTGGTCCAAG...GAGTCTGAGTGATAGTATGGATGCTGGCGTCTTCAAGTCCTCTTCACTGTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR TCA 72 bp | CATCTCCCAACCATTTTGAAGAGAGGAAGAACACAGTaGAGAGGACTTGAAGACGCCAGCATCCATACTATC | + |
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Preference number: 3 (lower is better) Translates to: HLPTILKRGRTQ*RGLEDASIHTI Trigger: GATAGTATGGATGCTGGCGTCTTCAAGTCCTCTTCACTGTGTTCTTCCTCTCTTCAAAATGGTTGGGAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR GCA 72 bp | AGCTCCCCTACTTCTGAACCTATAGTTCTTAAACAGTaGTCCTTCGACAAACTCAAGACACATTCTGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: SSPTSEPIVLKQ*SFDKLKTHSGP Trigger: AGGGCCAGAATGTGTCTTGAGTTTGTCGAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR TCA 72 bp | CATTTTGAAGAGAGGAAGAACACAGTGAAGAGGACTTaGAGACGCCAGCATCCATACTATCACTCAGACTCA | + |
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Preference number: 3 (lower is better) Translates to: HFEERKNTVKRT*RRQHPYYHSDS Trigger: TGAGTCTGAGTGATAGTATGGATGCTGGCGTCTTCAAGTCCTCTTCACTGTGTTCTTCCTCTCTTCAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR-3UTR CAA 90 bp | AGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGATCATGCTTAATTCTCACTTaGTCTCAACCCAAAAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: RRLVGTERSDYILHFERSCLILT*SQPKSS Trigger: GGAGCTTTTGGGTTGAGACAAAGTGAGAATTAAGCA...TGATCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR GCA 90 bp | GTGGGAAGGGCCAAGGCTGAGGTGGCCAGAAATGAGTACTGGGTTAAGGCACAGCAGTGCGGGTGCTCCTaGGCCAGCTTCCTGGCACAC | + |
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Preference number: 4 (lower is better) Translates to: VGRAKAEVARNEYWVKAQQCGCS*ASFLAH Trigger: GTGTGCCAGGAAGCTGGCGCAGGAGCACCCGCACTG...CTGTGCCTTAACCCAGTACTCATTTCTGGCCACCTCAGCCTTGGCCCTTCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CCA 90 bp | GAGCGAGGCTACTTGGACCAACCAAGTTGGCAGGTGGGAAGGGCCAAGGCTGAGCCTGCCAGTGGGAAATaGGAGACAGGCCCAGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: ERGYLDQPSWQVGRAKAEPASGK*ETGPVP Trigger: AGGCACTGGGCCTGTCTCCCATTTCCCACTGGCAGG...CTCAGCCTTGGCCCTTCCCACCTGCCAACTTGGTTGGTCCAAGTAGCCTCGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CCA 90 bp | GAGGTGGCCAGAAATGAGTACTGGGTTAAGGCACAGGCCAAAGCCCCTGCTGTCTGTGGGGGTCGCAGCTaGATGGTCCGGAGCACGGTG | + |
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Preference number: 4 (lower is better) Translates to: EVARNEYWVKAQAKAPAVCGGRS*MVRSTV Trigger: CACCGTGCTCCGGACCATCCAGCTGCGACCCCCACA...GACAGCAGGGGCTTTGGCCTGTGCCTTAACCCAGTACTCATTTCTGGCCACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR TCA 90 bp | GAGGTGGCCAGAAATGAGTACTGGGTTAAGGCACAGGCCAAAGCCCCTGCTGTCTGGCGGCGGCTGCGTTaGAACTTCTCTCGGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: EVARNEYWVKAQAKAPAVWRRLR*NFSRCA Trigger: GGCACACCGAGAGAAGTTTCAACGCAGCCGCCGCCA...GACAGCAGGGGCTTTGGCCTGTGCCTTAACCCAGTACTCATTTCTGGCCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CCA 90 bp | GAGGTGGCCAGAAATGAGTACTGGGTTAAGGCACAGGCCAAAGCCCCTGCTGTCCCCTCTGCAGGCAGCTaGCCAGGTAGTCTGTACGGG | + |
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Preference number: 4 (lower is better) Translates to: EVARNEYWVKAQAKAPAVPSAGS*PGSLYG Trigger: CCCGTACAGACTACCTGGCCAGCTGCCTGCAGAGGG...GACAGCAGGGGCTTTGGCCTGTGCCTTAACCCAGTACTCATTTCTGGCCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR GCA 90 bp | GAGGTGGCCAGAAATGAGTACTGGGTTAAGGCACAGGCCAAAGCCCCTGCTGTCGGCTCTGTCCAGTGTTaGGGTCCCAGCGGCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: EVARNEYWVKAQAKAPAVGSVQC*GPSGSF Trigger: AAAGGAGCCGCTGGGACCGCAACACTGGACAGAGCC...GACAGCAGGGGCTTTGGCCTGTGCCTTAACCCAGTACTCATTTCTGGCCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CCA 90 bp | TGGCAGGTGGGAAGGGCCAAGGCTGAGGTGGCCAGAAATGAGTACTGGGTTAAGTCTCTCTCAGCAATCTaGGAGGCCATGCCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: WQVGRAKAEVARNEYWVKSLSAI*EAMPSS Trigger: GCTGCTGGGCATGGCCTCCCAGATTGCTGAGAGAGA...CTTAACCCAGTACTCATTTCTGGCCACCTCAGCCTTGGCCCTTCCCACCTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CCA 90 bp | GTGGGAAGGGCCAAGGCTGAGGTGGCCAGAAATGAGTACTGGGTTAAGGCACAGTCCGACCCATCATCGTaGAAGAGGCCAGGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: VGRAKAEVARNEYWVKAQSDPSS*KRPGKR Trigger: CCTCTTCCCTGGCCTCTTCCACGATGATGGGTCGGA...CTGTGCCTTAACCCAGTACTCATTTCTGGCCACCTCAGCCTTGGCCCTTCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR TCA 90 bp | TGGCAGGTGGGAAGGGCCAAGGCTGAGGTGGCCAGAAATGAGTACTGGGTTAAGCCCTCCTACCAGCACTaGCACCTCAAACTTGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: WQVGRAKAEVARNEYWVKPSYQH*HLKLVP Trigger: TGGCACAAGTTTGAGGTGTCAGTGCTGGTAGGAGGG...CTTAACCCAGTACTCATTTCTGGCCACCTCAGCCTTGGCCCTTCCCACCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR GCA 90 bp | TGGCAGGTGGGAAGGGCCAAGGCTGAGGTGGCCAGAAATGAGTACTGGGTTAAGCATGCCCAGCAGCAGTaGATCCACATCTTCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: WQVGRAKAEVARNEYWVKHAQQQ*IHIFSP Trigger: AGGGCTGAAGATGTGGATGCACTGCTGCTGGGCATG...CTTAACCCAGTACTCATTTCTGGCCACCTCAGCCTTGGCCCTTCCCACCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| 3UTR CAA 72 bp | TCTCTGAGCCTACACATGATGCCTGAGCGAGGCTACTaGGACCAACCAAGTTGGCAGGTGGGAAGGGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: SLSLHMMPERGY*DQPSWQVGRAK Trigger: CTTGGCCCTTCCCACCTGCCAACTTGGTTGGTCCAAGTAGCCTCGCTCAGGCATCATGTGTAGGCTCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR TCA 90 bp | GAACACAGTGAAGAGGACTTGAAGACGCCAGCATCCATACTATCACTCAGACTCTGGCCGTGGAGGCGATaGGGCGATGGAAGTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: EHSEEDLKTPASILSLRLWPWRR*GDGSPR Trigger: CCGTGGACTTCCATCGCCTCATCGCCTCCACGGCCA...GAGTCTGAGTGATAGTATGGATGCTGGCGTCTTCAAGTCCTCTTCACTGTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR GCA 90 bp | GAGGTGGCCAGAAATGAGTACTGGGTTAAGGCACAGGCCAAAGCCCCTGCTGTCAAGAGATGGCTGCCCTaGAGAACCTCTCATGACCCT | + |
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Preference number: 4 (lower is better) Translates to: EVARNEYWVKAQAKAPAVKRWLP*RTSHDP Trigger: AGGGTCATGAGAGGTTCTGCAGGGCAGCCATCTCTT...GACAGCAGGGGCTTTGGCCTGTGCCTTAACCCAGTACTCATTTCTGGCCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR GCA 90 bp | GTGGGAAGGGCCAAGGCTGAGGTGGCCAGAAATGAGTACTGGGTTAAGGCACAGATTGCTCCTGGAGAGTaGAGGGTTGATGTCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VGRAKAEVARNEYWVKAQIAPGE*RVDVLP Trigger: TGGCAGGACATCAACCCTGCACTCTCCAGGAGCAAT...CTGTGCCTTAACCCAGTACTCATTTCTGGCCACCTCAGCCTTGGCCCTTCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR GCA 90 bp | TGGCAGGTGGGAAGGGCCAAGGCTGAGGTGGCCAGAAATGAGTACTGGGTTAAGCAGAGGCAGAGTCCCTaGATCAGCCTGATTGATGTC | + |
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Preference number: 4 (lower is better) Translates to: WQVGRAKAEVARNEYWVKQRQSP*ISLIDV Trigger: GACATCAATCAGGCTGATGCAGGGACTCTGCCTCTG...CTTAACCCAGTACTCATTTCTGGCCACCTCAGCCTTGGCCCTTCCCACCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CCA 90 bp | TGGCAGGTGGGAAGGGCCAAGGCTGAGGTGGCCAGAAATGAGTACTGGGTTAAGACAGCTTTGGGTATCTaGCACAGGTGTCACCCGTTG | + |
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Preference number: 4 (lower is better) Translates to: WQVGRAKAEVARNEYWVKTALGI*HRCHPL Trigger: CAACGGGTGACACCTGTGCCAGATACCCAAAGCTGT...CTTAACCCAGTACTCATTTCTGGCCACCTCAGCCTTGGCCCTTCCCACCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR TCA 90 bp | GTGGGAAGGGCCAAGGCTGAGGTGGCCAGAAATGAGTACTGGGTTAAGGCACAGCCCATCTGTGCTCCATaGGGTTGTTATACCATCCAT | + |
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Preference number: 4 (lower is better) Translates to: VGRAKAEVARNEYWVKAQPICAP*GCYTIH Trigger: ATGGATGGTATAACAACCTCATGGAGCACAGATGGG...CTGTGCCTTAACCCAGTACTCATTTCTGGCCACCTCAGCCTTGGCCCTTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR GCA 90 bp | GAACACAGTGAAGAGGACTTGAAGACGCCAGCATCCATACTATCACTCAGACTCGGGAGACAGGCCCAGTaGCTCCCTGGCTTTGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: EHSEEDLKTPASILSLRLGRQAQ*LPGFGV Trigger: TACACCAAAGCCAGGGAGGCACTGGGCCTGTCTCCC...GAGTCTGAGTGATAGTATGGATGCTGGCGTCTTCAAGTCCTCTTCACTGTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CCA 90 bp | TCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGAGGTCCCGGGGGTTGCTaGGGCTCTGTCCAGTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SRRLVGTERSDYILHFERGPGGC*GSVQCC Trigger: GCAACACTGGACAGAGCCCCAGCAACCCCCGGGACC...TCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CCA 90 bp | GGTTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACCCAAAAGCGCCCTCCCTGCCCTGTaGAGGGGTCCGGCGCCATCC | + |
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Preference number: 4 (lower is better) Translates to: GCLLSSFCLILTLSQPKSALPAL*RGPAPS Trigger: GGATGGCGCCGGACCCCTCCACAGGGCAGGGAGGGC...GCTTTTGGGTTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CCA 90 bp | GAACACAGTGAAGAGGACTTGAAGACGCCAGCATCCATACTATCACTCAGACTCGAGGCGATGAGGCGATaGAAGTCCACGGCAGCATCG | + |
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Preference number: 4 (lower is better) Translates to: EHSEEDLKTPASILSLRLEAMRR*KSTAAS Trigger: CGATGCTGCCGTGGACTTCCATCGCCTCATCGCCTC...GAGTCTGAGTGATAGTATGGATGCTGGCGTCTTCAAGTCCTCTTCACTGTGTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR TCA 90 bp | AACAGTGCTCCTTCGACAAACTCAAGACACATTCTGGCCCTAGAGATCTCTGAGGCGGGATGTAAATGTTaGGGAACTCTGCGGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: NSAPSTNSRHILALEISEAGCKC*GTLRGS Trigger: GCTGCCCCGCAGAGTTCCTCAACATTTACATCCCGC...CTCAGAGATCTCTAGGGCCAGAATGTGTCTTGAGTTTGTCGAAGGAGCACTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR TCA 90 bp | GAACACAGTGAAGAGGACTTGAAGACGCCAGCATCCATACTATCACTCAGACTCGCCGGCAGAGGTTCTTaGTCACTTCCGGCACTTCCA | + |
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Preference number: 4 (lower is better) Translates to: EHSEEDLKTPASILSLRLAGRGS*SLPALP Trigger: TGGAAGTGCCGGAAGTGATCAAGAACCTCTGCCGGC...GAGTCTGAGTGATAGTATGGATGCTGGCGTCTTCAAGTCCTCTTCACTGTGTTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR GCA 90 bp | TCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCGACAAACTCAAGCCAGCCGCCCGGATGTaGAGGCTGAGTGTGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SPTSEPIVLKQCSFDKLKPAARM*RLSVSS Trigger: CGAGGACACACTCAGCCTGCACATCCGGGCGGCTGG...CTTGAGTTTGTCGAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR TCA 90 bp | AACAGTGCTCCTTCGACAAACTCAAGACACATTCTGGCCCTAGAGATCTCTGAGTGGAGAGTGCAGGGTTaGTGTCCTGCCAGTGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: NSAPSTNSRHILALEISEWRVQG*CPASGK Trigger: TTTCCCACTGGCAGGACATCAACCCTGCACTCTCCA...CTCAGAGATCTCTAGGGCCAGAATGTGTCTTGAGTTTGTCGAAGGAGCACTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR TCA 90 bp | CAACCCAAAAGCTCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCAGATCTTCTCCTGGCTaGTGTAGGAGGCTCGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: QPKSSPTSEPIVLKQCSFRSSPG*CRRLAG Trigger: GCCGGCGAGCCTCCTACATCAGCCAGGAGAAGATCT...GAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR TCA 90 bp | GAAGACGCCAGCATCCATACTATCACTCAGACTCACTTTCAAAAACTTGACAGGCAGGTGGGTCACTCCTaGTGGCAGCAGCTCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: EDASIHTITQTHFQKLDRQVGHS*WQQLSL Trigger: AAGGCTGAGCTGCTGCCATCAGGAGTGACCCACCTG...CCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAGTATGGATGCTGGCGTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR GCA 90 bp | TGCTCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGTGGCCTCCAGCACAGTaGCATTGCTCCTGGAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: CSRRLVGTERSDYILHFEWPPAQ*HCSWRV Trigger: CACTCTCCAGGAGCAATGGCACTGTGCTGGAGGCCA...CTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR GCA 90 bp | CAACCCAAAAGCTCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCGCCTGCAGGGTTCATTaGGGCCCTGCCACTCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QPKSSPTSEPIVLKQCSFACRVH*GPATPK Trigger: CTTTGGAGTGGCAGGGCCGCAATGAACCCTGCAGGC...GAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CCA 90 bp | TGCTCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGGGGCCTCACGCACTTTaGTCGAGGAATCCAGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: CSRRLVGTERSDYILHFEGPHAL*SRNPEA Trigger: TGCCTCTGGATTCCTCGACCAAAGTGCGTGAGGCCC...CTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR TCA 90 bp | TGCTCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGTGGGGTCCACATTGGTaGCAGCCACTAGAATGTCCC | + |
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Preference number: 4 (lower is better) Translates to: CSRRLVGTERSDYILHFEWGPHW*QPLECP Trigger: GGGACATTCTAGTGGCTGTCACCAATGTGGACCCCA...CTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR TCA 90 bp | CCAGCATCCATACTATCACTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTATGGTCCGGAGCACGGTaGGCCTGCCATCCACTACTC | + |
|
Preference number: 4 (lower is better) Translates to: PASILSLRLTFKNLTGCLWSGAR*ACHPLL Trigger: GAGTAGTGGATGGCAGGCTCACCGTGCTCCGGACCA...TAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAGTATGGATGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR TCA 90 bp | CAACCCAAAAGCTCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCCCTTCAGAGCTCCCCTaGCGTTTTCCACCAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPKSSPTSEPIVLKQCSFPSELP*RFPPVP Trigger: AGGCACTGGTGGAAAACGTCAGGGGAGCTCTGAAGG...GAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGAGACTCCAGTAGCTGTTaGAGACCCGGAGAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRRLVGTERSDYILHFERDSSSC*RPGELQ Trigger: CTGGAGCTCTCCGGGTCTGCAACAGCTACTGGAGTC...TCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | TCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCGACAAACTCAAGAGGATGAGGTTGACCTaGTGTGGGGGTCGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPTSEPIVLKQCSFDKLKRMRLT*CGGRSW Trigger: CCAGCTGCGACCCCCACAGCAGGTCAACCTCATCCT...CTTGAGTTTGTCGAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | GAAGACGCCAGCATCCATACTATCACTCAGACTCACTTTCAAAAACTTGACAGGATCTGCATAGCTGGCTaGAACAAGGCGCTGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EDASIHTITQTHFQKLDRICIAG*NKALQP Trigger: CGGCTGCAGCGCCTTGTTCCAGCCAGCTATGCAGAT...CCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAGTATGGATGCTGGCGTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | AACAGTGCTCCTTCGACAAACTCAAGACACATTCTGGCCCTAGAGATCTCTGAGTCCTCAACCACCACGTaGTCCTCTCTCTCAGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: NSAPSTNSRHILALEISESSTTT*SSLSAI Trigger: GATTGCTGAGAGAGAGGACCACGTGGTGGTTGAGGA...CTCAGAGATCTCTAGGGCCAGAATGTGTCTTGAGTTTGTCGAAGGAGCACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | TCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGAGGCCCAGTGCCTCCCTaGCTTTGGTGTAAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRRLVGTERSDYILHFERGPVPP*LWCKKA Trigger: TGCCTTCTTACACCAAAGCCAGGGAGGCACTGGGCC...TCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | GAAGACGCCAGCATCCATACTATCACTCAGACTCACTTTCAAAAACTTGACAGGGCAGGGTTGATGTCCTaGCAGTGGGAAATGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EDASIHTITQTHFQKLDRAGLMS*QWEMGD Trigger: GTCTCCCATTTCCCACTGGCAGGACATCAACCCTGC...CCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAGTATGGATGCTGGCGTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGAGTGTCCATGGGGCACTaGAGTCTCTGTGGTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SRRLVGTERSDYILHFERVSMGH*SLCGDD Trigger: GTCATCACCACAGAGACTGCAGTGCCCCATGGACAC...TCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR TCA 90 bp | AGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGATCACTCCGTCGAATCTCTTaGGGAGGGTCTGTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RRLVGTERSDYILHFERSLRRIS*GGSVSM Trigger: CATGGACACAGACCCTCCTCAAGAGATTCGACGGAG...TGATCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR TCA 90 bp | AGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGATCACTCGGTGTGCCTCAGTaGACAGTAAGGGCTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RRLVGTERSDYILHFERSLGVPQ*TVRAGM Trigger: CATTCCAGCCCTTACTGTTCACTGAGGCACACCGAG...TGATCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | GGTTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACCCAAAAGCGCAGCCGAGAGCCTTTaGTGCCCCATCTGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCLLSSFCLILTLSQPKSAAESL*CPICAP Trigger: TGGAGCACAGATGGGGCAGCAAAGGCTCTCGGCTGC...GCTTTTGGGTTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | CAACCCAAAAGCTCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCACCTGGGAGAAAAGGTaGCTGAAGAAGGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPKSSPTSEPIVLKQCSFTWEKR*LKKVSR Trigger: CCTGGAGACCTTCTTCAGGCACCTTTTCTCCCAGGT...GAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | TCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCGACAAACTCAAGTTTGGTGGCGGCGGCTaGGTTGAAACTTCTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPTSEPIVLKQCSFDKLKFGGGG*VETSLG Trigger: ACCGAGAGAAGTTTCAACGCAGCCGCCGCCACCAAA...CTTGAGTTTGTCGAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | CAACCCAAAAGCTCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCGCCGCTGTGGTGTGCTaGAAATGCATAGTAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPKSSPTSEPIVLKQCSFAAVVC*KCIVVG Trigger: GCCTACTACTATGCATTTGCAGCACACCACAGCGGC...GAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | AACAGTGCTCCTTCGACAAACTCAAGACACATTCTGGCCCTAGAGATCTCTGAGGCAATCCGAACCCACTaGCCTGACTTATACTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSAPSTNSRHILALEISEAIRTH*PDLYSK Trigger: CTTTGAGTATAAGTCAGGGCAGTGGGTTCGGATTGC...CTCAGAGATCTCTAGGGCCAGAATGTGTCTTGAGTTTGTCGAAGGAGCACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | GAAGACGCCAGCATCCATACTATCACTCAGACTCACTTTCAAAAACTTGACAGGACTCTGGGGAGATACTaGGGTCCAGAAATGGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: EDASIHTITQTHFQKLDRTLGRY*GPEMDG Trigger: ACCGTCCATTTCTGGACCCCAGTATCTCCCCAGAGT...CCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAGTATGGATGCTGGCGTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | TGCTCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGTGGCGGTCTTGTCTCTaGAGCCTCTTGAAATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSRRLVGTERSDYILHFEWRSCL*SLLKFL Trigger: GAGGAATTTCAAGAGGCTCCAGAGACAAGACCGCCA...CTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR TCA 90 bp | TCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCGACAAACTCAAGAAAGGGTCCCAATGGTaGGTCCGAAGCCAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPTSEPIVLKQCSFDKLKKGSQW*VRSQIH Trigger: GTGGATTTGGCTTCGGACTCACCATTGGGACCCTTT...CTTGAGTTTGTCGAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | ATTCTCACTTTGTCTCAACCCAAAAGCTCCCCTACTTCTGAACCTATAGTTCTTAACAAGCCCAGAGCCTaGAGAAAGGGCTCCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILTLSQPKSSPTSEPIVLNKPRA*RKGSLF Trigger: GAACAGGGAGCCCTTTCTGCAGGCTCTGGGCTTGTT...AAGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTGAGACAAAGTGAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | CTATCACTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTACTGTCAAGTTTTAAGCGCTTGAACTGCTaGACCGTTTGGTGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLRLTFKNLTGCLLSSFKRLNC*TVWWRR Trigger: CCGCCGCCACCAAACGGTGCAGCAGTTCAAGCGCTT...AAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | AGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGATCAATAAAGCGCTTGAACTaGTGCACCGTTTGGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RRLVGTERSDYILHFERSIKRLN*CTVWWR Trigger: CCGCCACCAAACGGTGCAGCAGTTCAAGCGCTTTAT...TGATCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | AGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGATCATGTGTCCTCGTGGGGTaGAGAAGTCAGTGTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRLVGTERSDYILHFERSCVLVG*RSQCER Trigger: CCTTTCACACTGACTTCTGCACCCCACGAGGACACA...TGATCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | TCACTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTACTGTCAAGTTTTTGCGGCCACAACGAACTCTaGGGAGATACTGGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLTFKNLTGCLLSSFCGHNEL*GDTGVQ Trigger: CTGGACCCCAGTATCTCCCCAGAGTTCGTTGTGGCC...GCAAAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | GGTTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACCCAAAAGCGAGGGTCTGTGTCCATaGGGCACTGCAGTCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GCLLSSFCLILTLSQPKSEGLCP*GTAVSV Trigger: CACAGAGACTGCAGTGCCCCATGGACACAGACCCTC...GCTTTTGGGTTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | ATTCTCACTTTGTCTCAACCCAAAAGCTCCCCTACTTCTGAACCTATAGTTCTTCCTTCTCCACATTCTTaGTCATGCCAGGGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILTLSQPKSSPTSEPIVLPSPHS*SCQGDH Trigger: GTGGTCCCCCTGGCATGACCAAGAATGTGGAGAAGG...AAGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTGAGACAAAGTGAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR TCA 90 bp | AGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGATCAGTCTCTGGAGCCTCTTaGAATTCCTCTTTCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRLVGTERSDYILHFERSVSGAS*NSSFEA Trigger: GGCTTCGAAAGAGGAATTTCAAGAGGCTCCAGAGAC...TGATCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR TCA 90 bp | GGTTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACCCAAAAGCCAAGCTTCTCCGACATaGTGCTCTGGCGGTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GCLLSSFCLILTLSQPKSQASPT*CSGGLV Trigger: GACAAGACCGCCAGAGCATCATGTCGGAGAAGCTTG...GCTTTTGGGTTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR TCA 90 bp | CTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTACTGTCAAGTTTTTGCTTAGGAAGAGCGCCCCAGTaGTGGTGTAAAACACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLTFKNLTGCLLSSFCLGRAPQ*WCKTPP Trigger: TGGCGGTGTTTTACACCATCACTGGGGCGCTCTTCC...TAAGCAAAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | TCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCGACAAACTCAAGATGGTAGAGAGGAACTaGTCAGAGGCCACAACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPTSEPIVLKQCSFDKLKMVERN*SEATTN Trigger: GTTCGTTGTGGCCTCTGAGCAGTTCCTCTCTACCAT...CTTGAGTTTGTCGAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | GAAGACGCCAGCATCCATACTATCACTCAGACTCACTTTCAAAAACTTGACAGGCGTAGCCTGACAAACTaGTCAAGGACAATAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EDASIHTITQTHFQKLDRRSLTN*SRTIVL Trigger: CAGCACTATTGTCCTTGACCAGTTTGTCAGGCTACG...CCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAGTATGGATGCTGGCGTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR TCA 90 bp | ATTCTCACTTTGTCTCAACCCAAAAGCTCCCCTACTTCTGAACCTATAGTTCTTGGAATCCCCTGGAAATaGCAACTGGCATTCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: ILTLSQPKSSPTSEPIVLGIPWK*QLAFLM Trigger: CATGAGGAATGCCAGTTGTCATTTCCAGGGGATTCC...AAGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTGAGACAAAGTGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR TCA 90 bp | CTATCACTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTACTGTCAAGTTTTAGGGAATGTAGCGGTTaGGGAAGGTCTCCCGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLRLTFKNLTGCLLSSFRECSG*GRSPAR Trigger: TCTTGCGGGAGACCTTCCTCAACCGCTACATTCCCT...AAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | ATTCTCACTTTGTCTCAACCCAAAAGCTCCCCTACTTCTGAACCTATAGTTCTTCTGGTAGACACCATCTaGATAGCTGGCTGGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILTLSQPKSSPTSEPIVLLVDTI*IAGWNK Trigger: CTTGTTCCAGCCAGCTATGCAGATGGTGTCTACCAG...AAGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTGAGACAAAGTGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | TGCTCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGTGTTTCGGATCTCTaGGATCTCTTCCTTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSRRLVGTERSDYILHFESVSDL*DLFLRE Trigger: TTCTCTAAGGAAGAGATCGCAGAGATCCGAAACACT...CTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | AGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGATCATGGACAGGGGTCTCCTaGAAGCCAAAAGAAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: RRLVGTERSDYILHFERSWTGVS*KPKEDI Trigger: AATGTCTTCTTTTGGCTTGCAGGAGACCCCTGTCCA...TGATCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | AACTTGACAGGTTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAATTGCCTGGTCACTGCTaGCCTCATCAGCTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLTGCLLSSFCLILTLSQLPGHC*PHQLLL Trigger: GAGCAGGAGCTGATGAGGGCAGCAGTGACCAGGCAA...TTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACCTGTCAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | CTATCACTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTACTGTCAAGTTTTTTGTTGCCTGGTCACTaGTGCCCTCATCAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLRLTFKNLTGCLLSSFLLPGH*CPHQLL Trigger: CAGGAGCTGATGAGGGCAGCAGTGACCAGGCAACAA...AAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | TCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCGACAAACTCAAGGTACCTCCCAAGAAATaGAGTTCTGAGCTCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPTSEPIVLKQCSFDKLKVPPKK*SSELPK Trigger: CTTTGGGAGCTCAGAACTCCATTTCTTGGGAGGTAC...CTTGAGTTTGTCGAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | CTATCACTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTACTGTCAAGTTTTTTGATGTCCTGCCAGTaGGAAATGGGAGACAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLRLTFKNLTGCLLSSFLMSCQ*EMGDRP Trigger: GGGCCTGTCTCCCATTTCCCACTGGCAGGACATCAA...AAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | ATTCTCACTTTGTCTCAACCCAAAAGCTCCCCTACTTCTGAACCTATAGTTCTTACGAGACTTCTCCTCTaGGGAGCCTTTCATGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILTLSQPKSSPTSEPIVLTRLLL*GAFHED Trigger: GTCTTCATGAAAGGCTCCCCAGAGGAGAAGTCTCGT...AAGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTGAGACAAAGTGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR TCA 90 bp | CCAGCATCCATACTATCACTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTACAAGAAATGGAGTTCTaGGCTCCCAAAGAAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PASILSLRLTFKNLTGCLQEMEF*APKEAS Trigger: ACTGGCTTCTTTGGGAGCTCAGAACTCCATTTCTTG...TAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAGTATGGATGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | ATTCTCACTTTGTCTCAACCCAAAAGCTCCCCTACTTCTGAACCTATAGTTCTTTTGCTGCCCCATCTGTaGTCCATGAGGTTGTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: ILTLSQPKSSPTSEPIVLLLPHL*SMRLLY Trigger: GTATAACAACCTCATGGAGCACAGATGGGGCAGCAA...AAGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTGAGACAAAGTGAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | CTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTACTGTCAAGTTTTTGCTTACCAGGCCAGAAATCTTaGATGTCCTCAACCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: LRLTFKNLTGCLLSSFCLPGQKS*MSSTTT Trigger: CGTGGTGGTTGAGGACATGCAAGATTTCTGGCCTGG...TAAGCAAAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR GCA 90 bp | GGTTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACCCAAAAGCTTTTCCACCAGTGCCTaGCGTTCCTCCTCCATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GCLLSSFCLILTLSQPKSFSTSA*RSSSML Trigger: TAACATGGAGGAGGAACGGCAGGCACTGGTGGAAAA...GCTTTTGGGTTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | TCACTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTACTGTCAAGTTTTTGCACGGGAAAACTTCAGTaGCCCAGGCCAGAAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLTFKNLTGCLLSSFCTGKLQ*PRPEIL Trigger: CAAGATTTCTGGCCTGGGCCACTGAAGTTTTCCCGT...GCAAAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | CTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTACTGTCAAGTTTTTGCTTAGCCAAAAGAAGACATTaGGCTGTAGGGCACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRLTFKNLTGCLLSSFCLAKRRH*AVGHWG Trigger: ACCCCAGTGCCCTACAGCCCAATGTCTTCTTTTGGC...TAAGCAAAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | TTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACCCAAAAGCTCCTCAGTTCCCACTCCTaGAAGCTCAGCCCATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTVKFLLNSHFVSTQKLLSSHS*KLSPFS Trigger: GGAAAATGGGCTGAGCTTCCAGGAGTGGGAACTGAG...GAGCTTTTGGGTTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | AACTTGACAGGTTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACTGAGTGTGTCCTCGTaGGGTGCAGAAGTCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLTGCLLSSFCLILTLSQLSVSS*GAEVSV Trigger: CACACTGACTTCTGCACCCCACGAGGACACACTCAG...TTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACCTGTCAAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR TCA 90 bp | CCAGCATCCATACTATCACTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTAACTCATCCTTGGAAATaGGACCGTTCCCATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PASILSLRLTFKNLTGCLTHPWK*DRSHQS Trigger: ACTTTGATGGGAACGGTCTCATTTCCAAGGATGAGT...TAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAGTATGGATGCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR TCA 90 bp | TTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACCCAAAAGCTCTGCCTGTTGATGAGCTaGCAAGCCTTCTCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTVKFLLNSHFVSTQKLCLLMS*QAFSTF Trigger: GAATGTGGAGAAGGCTTGTCAGCTCATCAACAGGCA...GAGCTTTTGGGTTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | TCACTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTACTGTCAAGTTTTTGCCCTGGAAATGACAACTaGCATTCCTCATGTAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLTFKNLTGCLLSSFCPGNDN*HSSCRP Trigger: GGGTCTACATGAGGAATGCCAGTTGTCATTTCCAGG...GCAAAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | AGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGATCATTCTTACAGAACACTTaGCAGCTGACTGATGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRLVGTERSDYILHFERSFLQNT*QLTDDL Trigger: CAAGTCATCAGTCAGCTGCCAAGTGTTCTGTAAGAA...TGATCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | AACTTGACAGGTTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAAATCGAGGTACAGCTTTaGGTATCTGGCACAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NLTGCLLSSFCLILTLSQIEVQL*VSGTGV Trigger: GACACCTGTGCCAGATACCCAAAGCTGTACCTCGAT...TTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACCTGTCAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CCA 90 bp | AACTTGACAGGTTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAATTGATGTCTAACACCTaGGAGAAAAGGTGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLTGCLLSSFCLILTLSQLMSNT*EKRCLK Trigger: CTTCAGGCACCTTTTCTCCCAGGTGTTAGACATCAA...TTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACCTGTCAAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| 3UTR CAA 72 bp | ACTATCACTCAGACTCACTTTCAAAAACTTGACAGGTaGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TITQTHFQKLDR*STVKFLLNSHF Trigger: AAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS GCA 90 bp | GAGAAAAGGTGCCTGAAGAAGGTCTCCAGGAGGTGGCCCCGTTGTTaGCTGGTCACTGCTGCCCTCATCAGCTCCTGCTCCCTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKRCLKKVSRRWPRC*LVTAALISSCSLSS Trigger: GGAACTGAGGGAGCAGGAGCTGATGAGGGCAGCAGTGACCAGGCAACAACGGGGCCACCTCCTGGAGACCTTCTTCAGGCACCTTTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS CCA 90 bp | GCAGGTAGGGTTCTTTCAGGGGCTGGTAGACACCATCTGCATAGCTaGCTGGAACAAGGCGCTGCAGCCGAGAGCCTTTGCTGCCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: AGRVLSGAGRHHLHS*LEQGAAAESLCCPI Trigger: GATGGGGCAGCAAAGGCTCTCGGCTGCAGCGCCTTGTTCCAGCCAGCTATGCAGATGGTGTCTACCAGCCCCTGAAAGAACCCTACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS GCA 90 bp | GGGGTTAGGCAGGTAGGGTTCTTTCAGGGGCTGGTAGACACCATCTaGATAGCTGGCTGGAACAAGGCGCTGCAGCCGAGAGCCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GVRQVGFFQGLVDTI*IAGWNKALQPRAFA Trigger: AGCAAAGGCTCTCGGCTGCAGCGCCTTGTTCCAGCCAGCTATGCAGATGGTGTCTACCAGCCCCTGAAAGAACCCTACCTGCCTAACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS CCA 90 bp | GTAGGGTTCTTTCAGGGGCTGGTAGACACCATCTGCATAGCTGGCTaGAACAAGGCGCTGCAGCCGAGAGCCTTTGCTGCCCCATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGFFQGLVDTICIAG*NKALQPRAFAAPSV Trigger: CACAGATGGGGCAGCAAAGGCTCTCGGCTGCAGCGCCTTGTTCCAGCCAGCTATGCAGATGGTGTCTACCAGCCCCTGAAAGAACCCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | GAGCGAGGCTACTTGGACCAACCAAGTTGGCAGGTGGGAAGGGCCAAGGCTGAGCCCAGGCCAGAAATCTaGCATGTCCTCAACCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: ERGYLDQPSWQVGRAKAEPRPEI*HVLNHH Trigger: GTGGTGGTTGAGGACATGCAAGATTTCTGGCCTGGG...CTCAGCCTTGGCCCTTCCCACCTGCCAACTTGGTTGGTCCAAGTAGCCTCGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS TCA 90 bp | GAGGAACTCTGCGGGGCAGCCTGGTGTTTCCACACTCACCAGGTCTaGGAGCACGTGGTAGCCAAAGAAGACACCCAGGACTGTACGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EELCGAAWCFHTHQV*EHVVAKEDTQDCTV Trigger: AACCGTACAGTCCTGGGTGTCTTCTTTGGCTACCACGTGCTCTCAGACCTGGTGAGTGTGGAAACACCAGGCTGCCCCGCAGAGTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS GCA 90 bp | GCCTACACGGGTGGTATCGGTGATGCCGCTGTGGTGTGCTGCAAATaGATAGTAGTAGGCTCTCTCCAGGAAGAGCGCCCCAGTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: AYTGGIGDAAVVCCK*IVVGSLQEERPSDG Trigger: ACCATCACTGGGGCGCTCTTCCTGGAGAGAGCCTACTACTATGCATTTGCAGCACACCACAGCGGCATCACCGATACCACCCGTGTAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | TGGCAGGTGGGAAGGGCCAAGGCTGAGGTGGCCAGAAATGAGTACTGGGTTAAGGACGCAGTCTTCATGTaGTTTCGGGCACAGTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WQVGRAKAEVARNEYWVKDAVFM*FRAQWA Trigger: CGCCCACTGTGCCCGAAACAACATGAAGACTGCGTC...CTTAACCCAGTACTCATTTCTGGCCACCTCAGCCTTGGCCCTTCCCACCTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS GCA 90 bp | GATGATGCCTACACGGGTGGTATCGGTGATGCCGCTGTGGTGTGCTaGAAATGCATAGTAGTAGGCTCTCTCCAGGAAGAGCGCCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: DDAYTGGIGDAAVVC*KCIVVGSLQEERPS Trigger: ACTGGGGCGCTCTTCCTGGAGAGAGCCTACTACTATGCATTTGCAGCACACCACAGCGGCATCACCGATACCACCCGTGTAGGCATCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | GAGCGAGGCTACTTGGACCAACCAAGTTGGCAGGTGGGAAGGGCCAAGGCTGAGGGCACTTCCACACCTTaGACACAGAGCTGTGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ERGYLDQPSWQVGRAKAEGTSTP*TQSCVN Trigger: ATTCACACAGCTCTGTGTCAAAGGTGTGGAAGTGCC...CTCAGCCTTGGCCCTTCCCACCTGCCAACTTGGTTGGTCCAAGTAGCCTCGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS TCA 90 bp | ATAAAGCGCTTGAACTGCTGCACCGTTTGGTGGCGGCGGCTGCGTTaGAACTTCTCTCGGTGTGCCTCAGTGAACAGTAAGGGCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: IKRLNCCTVWWRRLR*NFSRCASVNSKGWN Trigger: ATTCCAGCCCTTACTGTTCACTGAGGCACACCGAGAGAAGTTTCAACGCAGCCGCCGCCACCAAACGGTGCAGCAGTTCAAGCGCTTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS GCA 90 bp | CTTCAGCCCTTTGTAGCTTGGGGTGCTCTCGACTCCAGTAGCTGTTaGAGACCCGGAGAGCTCCAGAGACACTTGAGTTATGACTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQPFVAWGALDSSSC*RPGELQRHLSYDWE Trigger: TTCCCAGTCATAACTCAAGTGTCTCTGGAGCTCTCCGGGTCTGCAACAGCTACTGGAGTCGAGAGCACCCCAAGCTACAAAGGGCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS CCA 90 bp | GTGGTAGCCAAAGAAGACACCCAGGACTGTACGGTTCCGAAGAGATaGCTGCCCTGCAGAACCTCTCATGACCCTGTTACTAAGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VVAKEDTQDCTVPKR*LPCRTSHDPVTKVS Trigger: CGACACCTTAGTAACAGGGTCATGAGAGGTTCTGCAGGGCAGCCATCTCTTCGGAACCGTACAGTCCTGGGTGTCTTCTTTGGCTACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS CCA 90 bp | CCCCCTACAAGCTTCTCCGACATGATGCTCTGGCGGTCTTGTCTCTaGAGCCTCTTGAAATTCCTCTTTCGAAGCCGGGCAACAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPTSFSDMMLWRSCL*SLLKFLFRSRATIQ Trigger: CTGGATTGTTGCCCGGCTTCGAAAGAGGAATTTCAAGAGGCTCCAGAGACAAGACCGCCAGAGCATCATGTCGGAGAAGCTTGTAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | TGCTCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGGAGGTGGCCCCGTTGTaGCCTGGTCACTGCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSRRLVGTERSDYILHFEEVAPL*PGHCCP Trigger: AGGGCAGCAGTGACCAGGCAACAACGGGGCCACCTC...CTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS TCA 90 bp | CAAGGCGCTGCAGCCGAGAGCCTTTGCTGCCCCATCTGTGCTCCATaGGGTTGTTATACCATCCATCAAATCGCTGTACCTCCCAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QGAAAESLCCPICAP*GCYTIHQIAVPPKK Trigger: TTTCTTGGGAGGTACAGCGATTTGATGGATGGTATAACAACCTCATGGAGCACAGATGGGGCAGCAAAGGCTCTCGGCTGCAGCGCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS TCA 90 bp | CTGCAAATGCATAGTAGTAGGCTCTCTCCAGGAAGAGCGCCCCAGTaGTGGTGTAAAACACCGCCACACAGCCAATGTGGCGCCTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LQMHSSRLSPGRAPQ*WCKTPPHSQCGACN Trigger: ATTACAGGCGCCACATTGGCTGTGTGGCGGTGTTTTACACCATCACTGGGGCGCTCTTCCTGGAGAGAGCCTACTACTATGCATTTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | GAGCGAGGCTACTTGGACCAACCAAGTTGGCAGGTGGGAAGGGCCAAGGCTGAGCTGTGCTCCATGAGGTaGTTATACCATCCATCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ERGYLDQPSWQVGRAKAELCSMR*LYHPSN Trigger: ATTTGATGGATGGTATAACAACCTCATGGAGCACAG...CTCAGCCTTGGCCCTTCCCACCTGCCAACTTGGTTGGTCCAAGTAGCCTCGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | TGCTCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGGTGGCGGCGGCTGCGTaGAAACTTCTCTCGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSRRLVGTERSDYILHFEVAAAA*KLLSVC Trigger: GCACACCGAGAGAAGTTTCAACGCAGCCGCCGCCAC...CTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS TCA 90 bp | GGCTGGAATGAAGTTACCTTTTTGCCAAACCTCCGTCGAATCTCTTaGGGAGGGTCTGTGTCCATGGGGCACTGCAGTCTCTGTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GWNEVTFLPNLRRIS*GGSVSMGHCSLCGD Trigger: ATCACCACAGAGACTGCAGTGCCCCATGGACACAGACCCTCCTCAAGAGATTCGACGGAGGTTTGGCAAAAAGGTAACTTCATTCCAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS TCA 90 bp | TTTGGTGGCGGCGGCTGCGTTGAAACTTCTCTCGGTGTGCCTCAGTaGACAGTAAGGGCTGGAATGAAGTTACCTTTTTGCCAAACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FGGGGCVETSLGVPQ*TVRAGMKLPFCQTS Trigger: GGAGGTTTGGCAAAAAGGTAACTTCATTCCAGCCCTTACTGTTCACTGAGGCACACCGAGAGAAGTTTCAACGCAGCCGCCGCCACCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS GCA 90 bp | CCACAGCTAAATACTCCAATCTTTCGGACTTGGGGGTGGACTTCCTaGAGAGAGTTGAAAAAGGGCTCAAAGGGAGGGCGACCAAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PQLNTPIFRTWGWTS*RELKKGSKGGRPKW Trigger: CCACTTTGGTCGCCCTCCCTTTGAGCCCTTTTTCAACTCTCTGCAGGAAGTCCACCCCCAAGTCCGAAAGATTGGAGTATTTAGCTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS CCA 90 bp | AGCTGTTGCAGACCCGGAGAGCTCCAGAGACACTTGAGTTATGACTaGGAATCCCCTGGAAATGACAACTGGCATTCCTCATGTAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: SCCRPGELQRHLSYD*ESPGNDNWHSSCRP Trigger: GGGTCTACATGAGGAATGCCAGTTGTCATTTCCAGGGGATTCCCAGTCATAACTCAAGTGTCTCTGGAGCTCTCCGGGTCTGCAACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS CCA 90 bp | TCCAAAGCTTCCACTCCCCCTACAAGCTTCTCCGACATGATGCTCTaGCGGTCTTGTCTCTGGAGCCTCTTGAAATTCCTCTTTCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKASTPPTSFSDMML*RSCLWSLLKFLFRS Trigger: GCTTCGAAAGAGGAATTTCAAGAGGCTCCAGAGACAAGACCGCCAGAGCATCATGTCGGAGAAGCTTGTAGGGGGAGTGGAAGCTTTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS CCA 90 bp | TTTTGCCAAACCTCCGTCGAATCTCTTGAGGAGGGTCTGTGTCCATaGGGCACTGCAGTCTCTGTGGTGATGACGCAGTCTTCATGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FCQTSVESLEEGLCP*GTAVSVVMTQSSCC Trigger: ACAACATGAAGACTGCGTCATCACCACAGAGACTGCAGTGCCCCATGGACACAGACCCTCCTCAAGAGATTCGACGGAGGTTTGGCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | AGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGATCAGGGCTCTGTCCAGTGTaGCGGTCCCAGCGGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRLVGTERSDYILHFERSGLCPV*RSQRLL Trigger: AAGGAGCCGCTGGGACCGCAACACTGGACAGAGCCC...TGATCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | TGCTCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGCAGGTCAGCTCCTCCTaGTCCTGGAAGCCAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSRRLVGTERSDYILHFEQVSSS*SWKPDS Trigger: GGAGTCTGGCTTCCAGGACAAGGAGGAGCTGACCTG...CTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | TGCTCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGCACAGGTGTCACCCGTaGGGGGTGAGTAGATTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CSRRLVGTERSDYILHFEHRCHP*GVSRFP Trigger: GGGAAATCTACTCACCCCCAACGGGTGACACCTGTG...CTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | ATTCTCACTTTGTCTCAACCCAAAAGCTCCCCTACTTCTGAACCTATAGTTCTTCTGGACAGGATGAGGTaGACCTGCTGTGGGGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ILTLSQPKSSPTSEPIVLLDRMR*TCCGGR Trigger: GCGACCCCCACAGCAGGTCAACCTCATCCTGTCCAG...AAGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTGAGACAAAGTGAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | GGTTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACCCAAAAGCCAGGAGGTGGCCCCGTaGTTGCCTGGTCACTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GCLLSSFCLILTLSQPKSQEVAP*LPGHCC Trigger: GCAGCAGTGACCAGGCAACAACGGGGCCACCTCCTG...GCTTTTGGGTTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | TCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCGACAAACTCAAGAGGGCCTCACGCACTTaGGTCGAGGAATCCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPTSEPIVLKQCSFDKLKRASRT*VEESRG Trigger: GCCTCTGGATTCCTCGACCAAAGTGCGTGAGGCCCT...CTTGAGTTTGTCGAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | TCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCGACAAACTCAAGCGCCGGCAGAGGTTCTaGATCACTTCCGGCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPTSEPIVLKQCSFDKLKRRQRF*ITSGTS Trigger: GGAAGTGCCGGAAGTGATCAAGAACCTCTGCCGGCG...CTTGAGTTTGTCGAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | TCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGAGCCTTCTCCACATTCTaGGTCATGCCAGGGGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: SRRLVGTERSDYILHFERAFSTF*VMPGGP Trigger: TGGTCCCCCTGGCATGACCAAGAATGTGGAGAAGGC...TCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | GGTTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACCCAAAAGCGGCCTGCAGGGTTCATaGCGGCCCTGCCACTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GCLLSSFCLILTLSQPKSGLQGS*RPCHSK Trigger: TTTGGAGTGGCAGGGCCGCAATGAACCCTGCAGGCC...GCTTTTGGGTTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | TTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACCCAAAAGCTCTGCAGCCGAGAGCCTTaGCTGCCCCATCTGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSTVKFLLNSHFVSTQKLCSREP*LPHLCS Trigger: GGAGCACAGATGGGGCAGCAAAGGCTCTCGGCTGCA...GAGCTTTTGGGTTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
||
| CDS-3UTR CAA 90 bp | TCCCCTACTTCTGAACCTATAGTTCTTAAACAGTGCTCCTTCGACAAACTCAAGCCTCCGTCGAATCTCTaGAGGAGGGTCTGTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPTSEPIVLKQCSFDKLKPPSNL*RRVCVH Trigger: ATGGACACAGACCCTCCTCAAGAGATTCGACGGAGG...CTTGAGTTTGTCGAAGGAGCACTGTTTAAGAACTATAGGTTCAGAAGTAGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CAA 90 bp | TTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACCCAAAAGCTCGCACTGGGGTCCACATaGGTGACAGCCACTAGAATG | + |
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Preference number: 5 (lower is better) Translates to: LSTVKFLLNSHFVSTQKLALGST*VTATRM Trigger: CATTCTAGTGGCTGTCACCAATGTGGACCCCAGTGC...GAGCTTTTGGGTTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CAA 90 bp | TTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAACCCAAAAGCTCAGCCAAAAGAAGACATaGGGCTGTAGGGCACTGGGG | + |
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Preference number: 5 (lower is better) Translates to: LSTVKFLLNSHFVSTQKLSQKKT*GCRALG Trigger: CCCCAGTGCCCTACAGCCCAATGTCTTCTTTTGGCT...GAGCTTTTGGGTTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CAA 90 bp | TCCAGGCGGTTAGTGGGCACAGAAAGGTCTGACTACATTTTACATTTTGAGAGACTAATGAACTCATCCTaGGAAATGAGACCGTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: SRRLVGTERSDYILHFERLMNSS*EMRPFP Trigger: TGGGAACGGTCTCATTTCCAAGGATGAGTTCATTAG...TCTCTCAAAATGTAAAATGTAGTCAGACCTTTCTGTGCCCACTAACCGCCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CAA 90 bp | AACTTGACAGGTTGTCTACTGTCAAGTTTTTGCTTAATTCTCACTTTGTCTCAAGATGCTCTGGCGGTCTaGTCTCTGGAGCCTCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: NLTGCLLSSFCLILTLSQDALAV*SLEPLE Trigger: TTCAAGAGGCTCCAGAGACAAGACCGCCAGAGCATC...TTGAGACAAAGTGAGAATTAAGCAAAAACTTGACAGTAGACAACCTGTCAAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CAA 90 bp | CTATCACTCAGACTCACTTTCAAAAACTTGACAGGTTGTCTACTGTCAAGTTTTCATCGAGGTACAGCTTaGGGTATCTGGCACAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: LSLRLTFKNLTGCLLSSFHRGTA*GIWHRC Trigger: ACACCTGTGCCAGATACCCAAAGCTGTACCTCGATG...AAAACTTGACAGTAGACAACCTGTCAAGTTTTTGAAAGTGAGTCTGAGTGATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS-3UTR CAA 90 bp | ATTCTCACTTTGTCTCAACCCAAAAGCTCCCCTACTTCTGAACCTATAGTTCTTAATGAAGTTACCTTTTaGCCAAACCTCCGTCGAATC | + |
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Preference number: 5 (lower is better) Translates to: ILTLSQPKSSPTSEPIVLNEVTF*PNLRRI Trigger: GATTCGACGGAGGTTTGGCAAAAAGGTAACTTCATT...AAGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTGAGACAAAGTGAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS TCA 72 bp | GCTGTGGGGGTCGCAGCTGGATGGTCCGGAGCACGGTaGGCCTGCCATCCACTACTCGAATCTGTCCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: AVGVAAGWSGAR*ACHPLLESVPA Trigger: AGCCGGGACAGATTCGAGTAGTGGATGGCAGGCTCACCGTGCTCCGGACCATCCAGCTGCGACCCCCACAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS GCA 72 bp | TGCCTGAAGAAGGTCTCCAGGAGGTGGCCCCGTTGTTaGCTGGTCACTGCTGCCCTCATCAGCTCCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CLKKVSRRWPRC*LVTAALISSCS Trigger: GGAGCAGGAGCTGATGAGGGCAGCAGTGACCAGGCAACAACGGGGCCACCTCCTGGAGACCTTCTTCAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CCA 72 bp | GGGAAATGGGAGACAGGCCCAGTGCCTCCCTGGCTTTaGTGTAAGAAGGCAGGCCTAGATCCCGGCCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GKWETGPVPPWL*CKKAGLDPGPS Trigger: AGAGGGGCCGGGATCTAGGCCTGCCTTCTTACACCAAAGCCAGGGAGGCACTGGGCCTGTCTCCCATTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CAA 72 bp | GGCTGTAAGTGCACAAGCACTGGCCTGCAGGGTTCATaGCGGCCCTGCCACTCCAAAGCTTCCACTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: GCKCTSTGLQGS*RPCHSKASTPP Trigger: AGGGGGAGTGGAAGCTTTGGAGTGGCAGGGCCGCAATGAACCCTGCAGGCCAGTGCTTGTGCACTTACAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS TCA 72 bp | TGCGGGGCAGCCTGGTGTTTCCACACTCACCAGGTCTaGGAGCACGTGGTAGCCAAAGAAGACACCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: CGAAWCFHTHQV*EHVVAKEDTQD Trigger: GTCCTGGGTGTCTTCTTTGGCTACCACGTGCTCTCAGACCTGGTGAGTGTGGAAACACCAGGCTGCCCCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS GCA 72 bp | GCTGTAAGTGCACAAGCACTGGCCTGCAGGGTTCATTaGGGCCCTGCCACTCCAAAGCTTCCACTCCCCCTA | + |
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Preference number: 6 (lower is better) Translates to: AVSAQALACRVH*GPATPKLPLPL Trigger: TAGGGGGAGTGGAAGCTTTGGAGTGGCAGGGCCGCAATGAACCCTGCAGGCCAGTGCTTGTGCACTTACAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CCA 72 bp | TTTCAGGGGCTGGTAGACACCATCTGCATAGCTGGCTaGAACAAGGCGCTGCAGCCGAGAGCCTTTGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FQGLVDTICIAG*NKALQPRAFAA Trigger: GGCAGCAAAGGCTCTCGGCTGCAGCGCCTTGTTCCAGCCAGCTATGCAGATGGTGTCTACCAGCCCCTGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CAA 90 bp | TCCATGGGGCACTGCAGTCTCTGTGGTGATGACGCAGTCTTCATGTaGTTTCGGGCACAGTGGGCGCTCATTCTGGGCGAAGGGCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: SMGHCSLCGDDAVFM*FRAQWALILGEGQI Trigger: GATCTGCCCTTCGCCCAGAATGAGCGCCCACTGTGCCCGAAACAACATGAAGACTGCGTCATCACCACAGAGACTGCAGTGCCCCATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS GCA 72 bp | CAGGTAGGGTTCTTTCAGGGGCTGGTAGACACCATCTaGATAGCTGGCTGGAACAAGGCGCTGCAGCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QVGFFQGLVDTI*IAGWNKALQPR Trigger: TCTCGGCTGCAGCGCCTTGTTCCAGCCAGCTATGCAGATGGTGTCTACCAGCCCCTGAAAGAACCCTACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS GCA 72 bp | GGTGGTATCGGTGATGCCGCTGTGGTGTGCTGCAAATaGATAGTAGTAGGCTCTCTCCAGGAAGAGCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GGIGDAAVVCCK*IVVGSLQEERP Trigger: GGGGCGCTCTTCCTGGAGAGAGCCTACTACTATGCATTTGCAGCACACCACAGCGGCATCACCGATACCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CCA 72 bp | GTTCTTTCAGGGGCTGGTAGACACCATCTGCATAGCTaGCTGGAACAAGGCGCTGCAGCCGAGAGCCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VLSGAGRHHLHS*LEQGAAAESLC Trigger: GCAAAGGCTCTCGGCTGCAGCGCCTTGTTCCAGCCAGCTATGCAGATGGTGTCTACCAGCCCCTGAAAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CCA 72 bp | ACCTCCGTCGAATCTCTTGAGGAGGGTCTGTGTCCATaGGGCACTGCAGTCTCTGTGGTGATGACGCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSVESLEEGLCP*GTAVSVVMTQS Trigger: AGACTGCGTCATCACCACAGAGACTGCAGTGCCCCATGGACACAGACCCTCCTCAAGAGATTCGACGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CAA 90 bp | GTGGCGCCTGTAATTCTCAATAAAGCGCTTGAACTGCTGCACCGTTaGGTGGCGGCGGCTGCGTTGAAACTTCTCTCGGTGTGCCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VAPVILNKALELLHR*VAAAALKLLSVCLS Trigger: ACTGAGGCACACCGAGAGAAGTTTCAACGCAGCCGCCGCCACCAAACGGTGCAGCAGTTCAAGCGCTTTATTGAGAATTACAGGCGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS TCA 72 bp | TTGAACTGCTGCACCGTTTGGTGGCGGCGGCTGCGTTaGAACTTCTCTCGGTGTGCCTCAGTGAACAGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LNCCTVWWRRLR*NFSRCASVNSK Trigger: CTTACTGTTCACTGAGGCACACCGAGAGAAGTTTCAACGCAGCCGCCGCCACCAAACGGTGCAGCAGTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS GCA 72 bp | AGGCGCTGCAGCCGAGAGCCTTTGCTGCCCCATCTGTaGTCCATGAGGTTGTTATACCATCCATCAAATCGC | + |
|
Preference number: 6 (lower is better) Translates to: RRCSREPLLPHL*SMRLLYHPSNR Trigger: GCGATTTGATGGATGGTATAACAACCTCATGGAGCACAGATGGGGCAGCAAAGGCTCTCGGCTGCAGCGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CAA 72 bp | CACTGCAGTCTCTGTGGTGATGACGCAGTCTTCATGTaGTTTCGGGCACAGTGGGCGCTCATTCTGGGCGAA | + |
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Preference number: 6 (lower is better) Translates to: HCSLCGDDAVFM*FRAQWALILGE Trigger: TTCGCCCAGAATGAGCGCCCACTGTGCCCGAAACAACATGAAGACTGCGTCATCACCACAGAGACTGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CAA 90 bp | TTCCACTCCCCCTACAAGCTTCTCCGACATGATGCTCTGGCGGTCTaGTCTCTGGAGCCTCTTGAAATTCCTCTTTCGAAGCCGGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: FHSPYKLLRHDALAV*SLEPLEIPLSKPGN Trigger: GTTGCCCGGCTTCGAAAGAGGAATTTCAAGAGGCTCCAGAGACAAGACCGCCAGAGCATCATGTCGGAGAAGCTTGTAGGGGGAGTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS GCA 72 bp | AAGACACCCAGGACTGTACGGTTCCGAAGAGATGGCTaGCCTGCAGAACCTCTCATGACCCTGTTACTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KTPRTVRFRRDG*PAEPLMTLLLR Trigger: CCTTAGTAACAGGGTCATGAGAGGTTCTGCAGGGCAGCCATCTCTTCGGAACCGTACAGTCCTGGGTGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS GCA 72 bp | GTACGGGAAAACTTCAGTGGCCCAGGCCAGAAATCTTaGATGTCCTCAACCACCACGTGGTCCTCTCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: VRENFSGPGQKS*MSSTTTWSSLS Trigger: TGAGAGAGAGGACCACGTGGTGGTTGAGGACATGCAAGATTTCTGGCCTGGGCCACTGAAGTTTTCCCGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS GCA 72 bp | TCCTTCAGAGCTCCCCTGACGTTTTCCACCAGTGCCTaGCGTTCCTCCTCCATGTTAAACAACAGAACCAGG | + |
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Preference number: 6 (lower is better) Translates to: SFRAPLTFSTSA*RSSSMLNNRTR Trigger: CCTGGTTCTGTTGTTTAACATGGAGGAGGAACGGCAGGCACTGGTGGAAAACGTCAGGGGAGCTCTGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS GCA 72 bp | TACACGGGTGGTATCGGTGATGCCGCTGTGGTGTGCTaGAAATGCATAGTAGTAGGCTCTCTCCAGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: YTGGIGDAAVVC*KCIVVGSLQEE Trigger: CTCTTCCTGGAGAGAGCCTACTACTATGCATTTGCAGCACACCACAGCGGCATCACCGATACCACCCGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CCA 72 bp | AGCTTCTCCGACATGATGCTCTGGCGGTCTTGTCTCTaGAGCCTCTTGAAATTCCTCTTTCGAAGCCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SFSDMMLWRSCL*SLLKFLFRSRA Trigger: TGCCCGGCTTCGAAAGAGGAATTTCAAGAGGCTCCAGAGACAAGACCGCCAGAGCATCATGTCGGAGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CCA 72 bp | TCCACTCCCCCTACAAGCTTCTCCGACATGATGCTCTaGCGGTCTTGTCTCTGGAGCCTCTTGAAATTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: STPPTSFSDMML*RSCLWSLLKFL Trigger: GAGGAATTTCAAGAGGCTCCAGAGACAAGACCGCCAGAGCATCATGTCGGAGAAGCTTGTAGGGGGAGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CAA 72 bp | TGTACGGGAAAACTTCAGTGGCCCAGGCCAGAAATCTaGCATGTCCTCAACCACCACGTGGTCCTCTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: CTGKLQWPRPEI*HVLNHHVVLSL Trigger: GAGAGAGAGGACCACGTGGTGGTTGAGGACATGCAAGATTTCTGGCCTGGGCCACTGAAGTTTTCCCGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CAA 90 bp | CGCTGCAGCCGAGAGCCTTTGCTGCCCCATCTGTGCTCCATGAGGTaGTTATACCATCCATCAAATCGCTGTACCTCCCAAGAAATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RCSREPLLPHLCSMR*LYHPSNRCTSQEME Trigger: CTCCATTTCTTGGGAGGTACAGCGATTTGATGGATGGTATAACAACCTCATGGAGCACAGATGGGGCAGCAAAGGCTCTCGGCTGCAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CAA 90 bp | AGCTTCTCCGACATGATGCTCTGGCGGTCTTGTCTCTGGAGCCTCTaGAAATTCCTCTTTCGAAGCCGGGCAACAATCCAGGCACTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SFSDMMLWRSCLWSL*KFLFRSRATIQALR Trigger: CCTTAGTGCCTGGATTGTTGCCCGGCTTCGAAAGAGGAATTTCAAGAGGCTCCAGAGACAAGACCGCCAGAGCATCATGTCGGAGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS TCA 72 bp | GCAGCCGAGAGCCTTTGCTGCCCCATCTGTGCTCCATaGGGTTGTTATACCATCCATCAAATCGCTGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: AAESLCCPICAP*GCYTIHQIAVP Trigger: AGGTACAGCGATTTGATGGATGGTATAACAACCTCATGGAGCACAGATGGGGCAGCAAAGGCTCTCGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS TCA 72 bp | GAAGTTACCTTTTTGCCAAACCTCCGTCGAATCTCTTaGGGAGGGTCTGTGTCCATGGGGCACTGCAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: EVTFLPNLRRIS*GGSVSMGHCSL Trigger: GAGACTGCAGTGCCCCATGGACACAGACCCTCCTCAAGAGATTCGACGGAGGTTTGGCAAAAAGGTAACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CCA 72 bp | AAAGAAGACACCCAGGACTGTACGGTTCCGAAGAGATaGCTGCCCTGCAGAACCTCTCATGACCCTGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: KEDTQDCTVPKR*LPCRTSHDPVT Trigger: AGTAACAGGGTCATGAGAGGTTCTGCAGGGCAGCCATCTCTTCGGAACCGTACAGTCCTGGGTGTCTTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CAA 72 bp | GACATGATGCTCTGGCGGTCTTGTCTCTGGAGCCTCTaGAAATTCCTCTTTCGAAGCCGGGCAACAATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DMMLWRSCLWSL*KFLFRSRATIQ Trigger: CTGGATTGTTGCCCGGCTTCGAAAGAGGAATTTCAAGAGGCTCCAGAGACAAGACCGCCAGAGCATCATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS TCA 72 bp | GTAGCTGTTGCAGACCCGGAGAGCTCCAGAGACACTTaGGTTATGACTGGGAATCCCCTGGAAATGACAACT | + |
|
Preference number: 6 (lower is better) Translates to: VAVADPESSRDT*VMTGNPLEMTT Trigger: AGTTGTCATTTCCAGGGGATTCCCAGTCATAACTCAAGTGTCTCTGGAGCTCTCCGGGTCTGCAACAGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS TCA 72 bp | GGCGGCTGCGTTGAAACTTCTCTCGGTGTGCCTCAGTaGACAGTAAGGGCTGGAATGAAGTTACCTTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GGCVETSLGVPQ*TVRAGMKLPFC Trigger: GCAAAAAGGTAACTTCATTCCAGCCCTTACTGTTCACTGAGGCACACCGAGAGAAGTTTCAACGCAGCCGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CCA 72 bp | AGACCCGGAGAGCTCCAGAGACACTTGAGTTATGACTaGGAATCCCCTGGAAATGACAACTGGCATTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RPGELQRHLSYD*ESPGNDNWHSS Trigger: TGAGGAATGCCAGTTGTCATTTCCAGGGGATTCCCAGTCATAACTCAAGTGTCTCTGGAGCTCTCCGGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CAA 72 bp | CGAGAGCCTTTGCTGCCCCATCTGTGCTCCATGAGGTaGTTATACCATCCATCAAATCGCTGTACCTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: REPLLPHLCSMR*LYHPSNRCTSQ Trigger: TTGGGAGGTACAGCGATTTGATGGATGGTATAACAACCTCATGGAGCACAGATGGGGCAGCAAAGGCTCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CAA 72 bp | AGTAGCTGTTGCAGACCCGGAGAGCTCCAGAGACACTaGAGTTATGACTGGGAATCCCCTGGAAATGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSCCRPGELQRH*SYDWESPGNDN Trigger: GTTGTCATTTCCAGGGGATTCCCAGTCATAACTCAAGTGTCTCTGGAGCTCTCCGGGTCTGCAACAGCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CCA 72 bp | AACTTCTCTCGGTGTGCCTCAGTGAACAGTAAGGGCTaGAATGAAGTTACCTTTTTGCCAAACCTCCGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: NFSRCASVNSKG*NEVTFLPNLRR Trigger: TCGACGGAGGTTTGGCAAAAAGGTAACTTCATTCCAGCCCTTACTGTTCACTGAGGCACACCGAGAGAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CCA 72 bp | CCACAGCTAAATACTCCAATCTTTCGGACTTGGGGGTaGACTTCCTGCAGAGAGTTGAAAAAGGGCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PQLNTPIFRTWG*TSCRELKKGSK Trigger: CTTTGAGCCCTTTTTCAACTCTCTGCAGGAAGTCCACCCCCAAGTCCGAAAGATTGGAGTATTTAGCTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CAA 90 bp | TTGGAGATCTCGATGAAGGACCTTAGCATCCTAATGAACTCATCCTaGGAAATGAGACCGTTCCCATCAAAGTCATACATTCGGAACATA | + |
|
Preference number: 6 (lower is better) Translates to: LEISMKDLSILMNSS*EMRPFPSKSYIRNI Trigger: TATGTTCCGAATGTATGACTTTGATGGGAACGGTCTCATTTCCAAGGATGAGTTCATTAGGATGCTAAGGTCCTTCATCGAGATCTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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| CDS CAA 72 bp | TCGATGAAGGACCTTAGCATCCTAATGAACTCATCCTaGGAAATGAGACCGTTCCCATCAAAGTCATACATT | + |
|
Preference number: 6 (lower is better) Translates to: SMKDLSILMNSS*EMRPFPSKSYI Trigger: AATGTATGACTTTGATGGGAACGGTCTCATTTCCAAGGATGAGTTCATTAGGATGCTAAGGTCCTTCATCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099461.4 |
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