Pregenerated sensors for DTYMK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026281Ensembl transcript IDs: ENSMUST00000027503.14, ENSMUST00000112890.3, ENSMUST00000112893.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTGCGGGTGTTTGCACACATGCCACACACAGGTGCTCGCACCCTTaGCACACACAAAAGTGTGCATGTTACAACCGGGGAGCAACGACG | + |
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Preference number: 1 (lower is better) Translates to: RAGVCTHATHRCSHP*HTQKCACYNRGATT Trigger: CGTCGTTGCTCCCCGGTTGTAACATGCACACTTTTGTGTGTGGCAAGGGTGCGAGCACCTGTGTGTGGCATGTGTGCAAACACCCGCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| 3UTR GCA 90 bp | CTCTGGTCTCGACGTGCGGGTGTTTGCACACATGCCACACACAGGTaGTCGCACCCTTGCCACACACAAAAGTGTGCATGTTACAACCGG | + |
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Preference number: 1 (lower is better) Translates to: LWSRRAGVCTHATHR*SHPCHTQKCACYNR Trigger: CCGGTTGTAACATGCACACTTTTGTGTGTGGCAAGGGTGCGAGCACCTGTGTGTGGCATGTGTGCAAACACCCGCACGTCGAGACCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| 3UTR CAA 90 bp | ACGTGCGGGTGTTTGCACACATGCCACACACAGGTGCTCGCACCCTaGCCACACACAAAAGTGTGCATGTTACAACCGGGGAGCAACGAC | + |
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Preference number: 2 (lower is better) Translates to: TCGCLHTCHTQVLAP*PHTKVCMLQPGSND Trigger: GTCGTTGCTCCCCGGTTGTAACATGCACACTTTTGTGTGTGGCAAGGGTGCGAGCACCTGTGTGTGGCATGTGTGCAAACACCCGCACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| 3UTR GCA 72 bp | TCCCAAGCTGGCCTCTGGTCTCGACGTGCGGGTGTTTaGACACATGCCACACACAGGTGCTCGCACCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: SQAGLWSRRAGV*THATHRCSHPC Trigger: GCAAGGGTGCGAGCACCTGTGTGTGGCATGTGTGCAAACACCCGCACGTCGAGACCAGAGGCCAGCTTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| 3UTR GCA 72 bp | AGAGGAAACCTCCCAAGCTGGCCTCTGGTCTCGACGTaGGGGTGTTTGCACACATGCCACACACAGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: RGNLPSWPLVST*GCLHTCHTQVL Trigger: GAGCACCTGTGTGTGGCATGTGTGCAAACACCCGCACGTCGAGACCAGAGGCCAGCTTGGGAGGTTTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| 3UTR GCA 72 bp | CGACGTGCGGGTGTTTGCACACATGCCACACACAGGTaGTCGCACCCTTGCCACACACAAAAGTGTGCATGT | + |
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Preference number: 3 (lower is better) Translates to: RRAGVCTHATHR*SHPCHTQKCAC Trigger: ACATGCACACTTTTGTGTGTGGCAAGGGTGCGAGCACCTGTGTGTGGCATGTGTGCAAACACCCGCACGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| 3UTR GCA 72 bp | GTTTGCACACATGCCACACACAGGTGCTCGCACCCTTaGCACACACAAAAGTGTGCATGTTACAACCGGGGA | + |
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Preference number: 3 (lower is better) Translates to: VCTHATHRCSHP*HTQKCACYNRG Trigger: TCCCCGGTTGTAACATGCACACTTTTGTGTGTGGCAAGGGTGCGAGCACCTGTGTGTGGCATGTGTGCAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| 3UTR GCA 72 bp | AACCTTGCCTCAGCAGTTAAAAGCACTTACTGCTCTTaGCAAGGACCCAGGTTTGGTTCCCAGAACTCACAT | + |
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Preference number: 3 (lower is better) Translates to: NLASAVKSTYCS*QGPRFGSQNSH Trigger: ATGTGAGTTCTGGGAACCAAACCTGGGTCCTTGGCAAGAGCAGTAAGTGCTTTTAACTGCTGAGGCAAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| 3UTR-3UTR CAA 90 bp | GCAGCAGGTATGCATGAGGTGCACATACAGGTAGCCATTTATATTACACAAAAACAGGTGCTCGCACCCTaGCCACACACAAAAGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: AAGMHEVHIQVAIYITQKQVLAP*PHTKVC Trigger: GCACACTTTTGTGTGTGGCAAGGGTGCGAGCACCTG...TTTTTGTGTAATATAAATGGCTACCTGTATGTGCACCTCATGCATACCTGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| 3UTR TCA 72 bp | TTGCCAAGGACCCAGGTTTGGTTCCCAGAACTCACATaGCAGCTTACAACTCTCAGTAACTCTAGTTACAGG | + |
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Preference number: 3 (lower is better) Translates to: LPRTQVWFPELT*QLTTLSNSSYR Trigger: CCTGTAACTAGAGTTACTGAGAGTTGTAAGCTGTCATGTGAGTTCTGGGAACCAAACCTGGGTCCTTGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| 3UTR CCA 72 bp | ACTCTCAGTAACTCTAGTTACAGGAGTTGTCTTCCTTaGGCAGCAGGTATGCATGAGGTGCACATACAGGTA | + |
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Preference number: 3 (lower is better) Translates to: TLSNSSYRSCLP*AAGMHEVHIQV Trigger: TACCTGTATGTGCACCTCATGCATACCTGCTGCCCAAGGAAGACAACTCCTGTAACTAGAGTTACTGAGAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| 3UTR TCA 72 bp | TTACAGGAGTTGTCTTCCTTGGGCAGCAGGTATGCATaGGGTGCACATACAGGTAGCCATTTATATTACACA | + |
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Preference number: 3 (lower is better) Translates to: LQELSSLGSRYA*GAHTGSHLYYT Trigger: TGTGTAATATAAATGGCTACCTGTATGTGCACCTCATGCATACCTGCTGCCCAAGGAAGACAACTCCTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| 3UTR-3UTR CAA 90 bp | TTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCAGTAGGTGCAGAACCAGAAAATaGTATTGGCAATGGAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: FSPIDLKETATPLQPSSRCRTRK*YWQWKL Trigger: CAGCTTCCATTGCCAATACAATTTTCTGGTTCTGCA...CCTACTGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| 3UTR-3UTR CAA 90 bp | CAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCAGTAGGTAAAGAGCCTTCTACCAGTCTCTaGCAGAACCAGAAAATTGTA | + |
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Preference number: 3 (lower is better) Translates to: QLISRKLLHLYSQAVGKEPSTSL*QNQKIV Trigger: TACAATTTTCTGGTTCTGCAAGAGACTGGTAGAAGG...CTCTTTACCTACTGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| 3UTR CAA 72 bp | CTCCCAAGCTGGCCTCTGGTCTCGACGTGCGGGTGTTaGCACACATGCCACACACAGGTGCTCGCACCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LPSWPLVSTCGC*HTCHTQVLAPL Trigger: CAAGGGTGCGAGCACCTGTGTGTGGCATGTGTGCAAACACCCGCACGTCGAGACCAGAGGCCAGCTTGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| CDS-3UTR GCA 90 bp | TACTGCTCTTGCCAAGGACCCAGGTTTGGTTCCCAGAACTCACATGACAGCTTATTGTTCCCAGCGGTTTaGAGAGAAGAGCAGGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: YCSCQGPRFGSQNSHDSLLFPAV*REEQVH Trigger: GTGCACCTGCTCTTCTCTGCAAACCGCTGGGAACAA...TAAGCTGTCATGTGAGTTCTGGGAACCAAACCTGGGTCCTTGGCAAGAGCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| CDS-3UTR CCA 90 bp | GTGATTTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCAGGATCAGGTCAGGTTTaGGAAGGCCCACGTCCGGTT | + |
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Preference number: 4 (lower is better) Translates to: VISHQLISRKLLHLYSQAGSGQV*EGPRPV Trigger: AACCGGACGTGGGCCTTCCCAAACCTGACCTGATCC...TGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAAATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS-3UTR TCA 90 bp | TTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCAGTAGGTCTCTTTGGCACCAGTaGAGGCAACCCCAGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSPIDLKETATPLQPSSRSLWHQ*RQPQKR Trigger: CCTTTTCTGGGGTTGCCTTCACTGGTGCCAAAGAGA...CCTACTGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS-3UTR GCA 90 bp | TGTGATTTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCTTGTTCCCAGCGGTTTaGAGAGAAGAGCAGGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: CDFSPIDLKETATPLQPSLFPAV*REEQVH Trigger: GTGCACCTGCTCTTCTCTGCAAACCGCTGGGAACAA...GCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAAATCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS-3UTR GCA 90 bp | TTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCAGTAGGTTCTCTTCCATGAGCTaGTGGAAACACAACAGAACC | + |
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Preference number: 4 (lower is better) Translates to: FSPIDLKETATPLQPSSRFSSMS*WKHNRT Trigger: GGTTCTGTTGTGTTTCCAGCAGCTCATGGAAGAGAA...CCTACTGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS-3UTR TCA 90 bp | GTGATTTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCATCCAGCAATTGTAACTaGAGGAACAGGATCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VISHQLISRKLLHLYSQASSNCN*RNRIRS Trigger: TGACCTGATCCTGTTCCTTCAGTTACAATTGCTGGA...TGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAAATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS-3UTR GCA 90 bp | GTGATTTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCAAAACACAACAGAACCTaGTTTTGGAAAGTCCCGGTC | + |
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Preference number: 4 (lower is better) Translates to: VISHQLISRKLLHLYSQAKHNRT*FWKVPV Trigger: GACCGGGACTTTCCAAAAGCAGGTTCTGTTGTGTTT...TGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAAATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS-3UTR CCA 90 bp | TTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCAGTAGGAACAGAACCTGCTTTTaGAAAGTCCCGGTCTCATAT | + |
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Preference number: 4 (lower is better) Translates to: FSPIDLKETATPLQPSSRNRTCF*KVPVSY Trigger: ATATGAGACCGGGACTTTCCAAAAGCAGGTTCTGTT...CCTACTGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS-3UTR CCA 90 bp | TGTGATTTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCCTTCCTCAATGCTTTTaGAAGCATCAACCACCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CDFSPIDLKETATPLQPSLPQCF*KHQPPS Trigger: GGAAGGTGGTTGATGCTTCCAAAAGCATTGAGGAAG...GCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAAATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS-3UTR CCA 90 bp | TGTGATTTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCGCACGGATTTCTTTATaGACTTCCTCAATGCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: CDFSPIDLKETATPLQPSARISL*TSSMLL Trigger: CAAAAGCATTGAGGAAGTCCATAAAGAAATCCGTGC...GCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAAATCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS TCA 90 bp | GCAGCTCCGCTCTGTGGCCCGAGGCGCACAGCGCGGTCACCAGCTTaGGGCCCTGCGTGGTCTTGCCAGCACGGTCCACACCCTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: AAPLCGPRRTARSPA*GPAWSCQHGPHPPA Trigger: TGCTGGAGGGTGTGGACCGTGCTGGCAAGACCACGCAGGGCCTCAAGCTGGTGACCGCGCTGTGCGCCTCGGGCCACAGAGCGGAGCTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112890.3 |
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| CDS GCA 90 bp | GCTCTGTGGCCCGAGGCGCACAGCGCGGTCACCAGCTTGAGGCCCTaGGTGGTCTTGCCAGCACGGTCCACACCCTCCAGCACGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: ALWPEAHSAVTSLRP*VVLPARSTPSSTMS Trigger: GCTCATCGTGCTGGAGGGTGTGGACCGTGCTGGCAAGACCACGCAGGGCCTCAAGCTGGTGACCGCGCTGTGCGCCTCGGGCCACAGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112890.3 |
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| CDS TCA 90 bp | TCAAGGCCAAACTCTCCCCGTGCAGCAGCGTCCAGCAATTGTAACTaGAGGAACAGGATCAGGTCAGGTTTGGGAAGGCCCACGTCCGGT | + |
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Preference number: 5 (lower is better) Translates to: SRPNSPRAAASSNCN*RNRIRSGLGRPTSG Trigger: ACCGGACGTGGGCCTTCCCAAACCTGACCTGATCCTGTTCCTTCAGTTACAATTGCTGGACGCTGCTGCACGGGGAGAGTTTGGCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112893.2 |
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| CDS GCA 90 bp | CCCCAGTGGCCTCTGTGCAGCGTTTCGGATGGCGTCCTCAGAGTGTaGACGGATTTCTTTATGGACTTCCTCAATGCTTTTGGAAGCATC | + |
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Preference number: 5 (lower is better) Translates to: PQWPLCSVSDGVLRV*TDFFMDFLNAFGSI Trigger: GATGCTTCCAAAAGCATTGAGGAAGTCCATAAAGAAATCCGTGCACACTCTGAGGACGCCATCCGAAACGCTGCACAGAGGCCACTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112893.2 |
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| CDS-3UTR CAA 90 bp | CTTACTGCTCTTGCCAAGGACCCAGGTTTGGTTCCCAGAACTCACATGACAGCTCTTGTTCCCAGCGGTTaGCAGAGAAGAGCAGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LTALAKDPGLVPRTHMTALVPSG*QRRAGA Trigger: TGCACCTGCTCTTCTCTGCAAACCGCTGGGAACAAG...AGCTGTCATGTGAGTTCTGGGAACCAAACCTGGGTCCTTGGCAAGAGCAGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112890.3 |
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| CDS-3UTR CAA 90 bp | TTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCAGTAGGAGGATCAGGTCAGGTTaGGGAAGGCCCACGTCCGGT | + |
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Preference number: 5 (lower is better) Translates to: FSPIDLKETATPLQPSSRRIRSG*GRPTSG Trigger: ACCGGACGTGGGCCTTCCCAAACCTGACCTGATCCT...CCTACTGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS CCA 90 bp | GCAGCGTTTCGGATGGCGTCCTCAGAGTGTGCACGGATTTCTTTATaGACTTCCTCAATGCTTTTGGAAGCATCAACCACCTTCCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: AAFRMASSECARISL*TSSMLLEASTTFQL Trigger: CAACTGGAAGGTGGTTGATGCTTCCAAAAGCATTGAGGAAGTCCATAAAGAAATCCGTGCACACTCTGAGGACGCCATCCGAAACGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112893.2 |
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| CDS GCA 90 bp | GAAGCATCAACCACCTTCCAGTTGAGGTTTTTCTCTTCCATGAGCTaGTGGAAACACAACAGAACCTGCTTTTGGAAAGTCCCGGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: EASTTFQLRFFSSMS*WKHNRTCFWKVPVS Trigger: TGAGACCGGGACTTTCCAAAAGCAGGTTCTGTTGTGTTTCCAGCAGCTCATGGAAGAGAAAAACCTCAACTGGAAGGTGGTTGATGCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112893.2 |
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| CDS-3UTR CAA 90 bp | TGTGATTTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCCTTGTTCCCAGCGGTTaGCAGAGAAGAGCAGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: CDFSPIDLKETATPLQPSLVPSG*QRRAGA Trigger: TGCACCTGCTCTTCTCTGCAAACCGCTGGGAACAAG...GCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAAATCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS-3UTR CAA 90 bp | CAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCAGTAGGTAAAGAGAAGGCCCACGTCCGGTaGTTTACACCAATCCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: QLISRKLLHLYSQAVGKEKAHVR*FTPIQG Trigger: TCCCTGGATTGGTGTAAACAACCGGACGTGGGCCTT...CTCTTTACCTACTGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS-3UTR CAA 90 bp | TTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCAGTAGGAGGGAAAAATTCTCTTaGGCACCAGTGAAGGCAACC | + |
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Preference number: 5 (lower is better) Translates to: FSPIDLKETATPLQPSSRREKFS*APVKAT Trigger: GGTTGCCTTCACTGGTGCCAAAGAGAATTTTTCCCT...CCTACTGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS-3UTR CAA 90 bp | TTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCAGTAGGCAACAGAACCTGCTTTaGGAAAGTCCCGGTCTCATA | + |
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Preference number: 5 (lower is better) Translates to: FSPIDLKETATPLQPSSRQQNLL*ESPGLI Trigger: TATGAGACCGGGACTTTCCAAAAGCAGGTTCTGTTG...CCTACTGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS-3UTR CAA 90 bp | TTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCAGTAGGTCAACCACCTTCCAGTaGAGGTTTTTCTCTTCCATG | + |
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Preference number: 5 (lower is better) Translates to: FSPIDLKETATPLQPSSRSTTFQ*RFFSSM Trigger: CATGGAAGAGAAAAACCTCAACTGGAAGGTGGTTGA...CCTACTGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS-3UTR CAA 90 bp | GTGATTTCTCACCAATTGATCTCAAGGAAACTGCTACACCTTTACAGCCAAGCAACTTCCTCAATGCTTTaGGAAGCATCAACCACCTTC | + |
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Preference number: 5 (lower is better) Translates to: VISHQLISRKLLHLYSQATSSML*EASTTF Trigger: GAAGGTGGTTGATGCTTCCAAAAGCATTGAGGAAGT...TGCTTGGCTGTAAAGGTGTAGCAGTTTCCTTGAGATCAATTGGTGAGAAATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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| CDS GCA 72 bp | CCCGAGGCGCACAGCGCGGTCACCAGCTTGAGGCCCTaGGTGGTCTTGCCAGCACGGTCCACACCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PEAHSAVTSLRP*VVLPARSTPSS Trigger: GCTGGAGGGTGTGGACCGTGCTGGCAAGACCACGCAGGGCCTCAAGCTGGTGACCGCGCTGTGCGCCTCGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112890.3 |
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| CDS CAA 90 bp | CCCGAGGCGCACAGCGCGGTCACCAGCTTGAGGCCCTGCGTGGTCTaGCCAGCACGGTCCACACCCTCCAGCACGATGAGCGCTCCCCGA | + |
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Preference number: 6 (lower is better) Translates to: PEAHSAVTSLRPCVV*PARSTPSSTMSAPR Trigger: TCGGGGAGCGCTCATCGTGCTGGAGGGTGTGGACCGTGCTGGCAAGACCACGCAGGGCCTCAAGCTGGTGACCGCGCTGTGCGCCTCGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112890.3 |
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| CDS CAA 90 bp | AGCAGCTCCGCTCTGTGGCCCGAGGCGCACAGCGCGGTCACCAGCTaGAGGCCCTGCGTGGTCTTGCCAGCACGGTCCACACCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSSALWPEAHSAVTS*RPCVVLPARSTPSS Trigger: GCTGGAGGGTGTGGACCGTGCTGGCAAGACCACGCAGGGCCTCAAGCTGGTGACCGCGCTGTGCGCCTCGGGCCACAGAGCGGAGCTGCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112890.3 |
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| CDS TCA 72 bp | CTCTGTGGCCCGAGGCGCACAGCGCGGTCACCAGCTTaGGGCCCTGCGTGGTCTTGCCAGCACGGTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: LCGPRRTARSPA*GPAWSCQHGPH Trigger: GTGTGGACCGTGCTGGCAAGACCACGCAGGGCCTCAAGCTGGTGACCGCGCTGTGCGCCTCGGGCCACAGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112890.3 |
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| CDS CAA 72 bp | GCTCTGTGGCCCGAGGCGCACAGCGCGGTCACCAGCTaGAGGCCCTGCGTGGTCTTGCCAGCACGGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: ALWPEAHSAVTS*RPCVVLPARST Trigger: TGTGGACCGTGCTGGCAAGACCACGCAGGGCCTCAAGCTGGTGACCGCGCTGTGCGCCTCGGGCCACAGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112890.3 |
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| CDS TCA 72 bp | AACTCTCCCCGTGCAGCAGCGTCCAGCAATTGTAACTaGAGGAACAGGATCAGGTCAGGTTTGGGAAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: NSPRAAASSNCN*RNRIRSGLGRP Trigger: GGGCCTTCCCAAACCTGACCTGATCCTGTTCCTTCAGTTACAATTGCTGGACGCTGCTGCACGGGGAGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112893.2 |
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| CDS TCA 72 bp | TTCCAAGTAGGAATTCAGAAGCTTGCCGATTTCCGTTaGTCTTTCGGGGAAACGCAGCAGCTCCGCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: FQVGIQKLADFR*SFGETQQLRSV Trigger: CACAGAGCGGAGCTGCTGCGTTTCCCCGAAAGATCAACGGAAATCGGCAAGCTTCTGAATTCCTACTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112890.3 |
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| CDS CAA 72 bp | CAGGATCAGGTCAGGTTTGGGAAGGCCCACGTCCGGTaGTTTACACCAATCCAGGGAAAAATTCTCTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: QDQVRFGKAHVR*FTPIQGKILFG Trigger: GCCAAAGAGAATTTTTCCCTGGATTGGTGTAAACAACCGGACGTGGGCCTTCCCAAACCTGACCTGATCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112893.2 |
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| CDS CAA 90 bp | CTGAAGGAACAGGATCAGGTCAGGTTTGGGAAGGCCCACGTCCGGTaGTTTACACCAATCCAGGGAAAAATTCTCTTTGGCACCAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LKEQDQVRFGKAHVR*FTPIQGKILFGTSE Trigger: TTCACTGGTGCCAAAGAGAATTTTTCCCTGGATTGGTGTAAACAACCGGACGTGGGCCTTCCCAAACCTGACCTGATCCTGTTCCTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112893.2 |
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| CDS GCA 72 bp | CCTCTGTGCAGCGTTTCGGATGGCGTCCTCAGAGTGTaGACGGATTTCTTTATGGACTTCCTCAATGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: PLCSVSDGVLRV*TDFFMDFLNAF Trigger: AAAAGCATTGAGGAAGTCCATAAAGAAATCCGTGCACACTCTGAGGACGCCATCCGAAACGCTGCACAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112893.2 |
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| CDS CAA 90 bp | TCCTCAGAGTGTGCACGGATTTCTTTATGGACTTCCTCAATGCTTTaGGAAGCATCAACCACCTTCCAGTTGAGGTTTTTCTCTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: SSECARISLWTSSML*EASTTFQLRFFSSM Trigger: CATGGAAGAGAAAAACCTCAACTGGAAGGTGGTTGATGCTTCCAAAAGCATTGAGGAAGTCCATAAAGAAATCCGTGCACACTCTGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027503.14 ENSMUST00000112893.2 |
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| CDS CCA 72 bp | GAAAAGGCGTATCTGTCCAAAACAAGGGTCACACCCTaGTTCAACTTCGCCTTAATTAATGGTACTTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: EKAYLSKTRVTP*FNFALINGTCS Trigger: GGAACAAGTACCATTAATTAAGGCGAAGTTGAACCAGGGTGTGACCCTTGTTTTGGACAGATACGCCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027503.14 |
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