Pregenerated sensors for DTX4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039982Ensembl transcript IDs: ENSMUST00000045521.9
Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGGAGAGGTGCAGGTCCTTGACTACCCAGAACTGAAGACTCCATaGGGACAGAAGGAGGTTGGCCCTCATCCCGTGTCTGGTTCGTTT | + |
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Preference number: 1 (lower is better) Translates to: WGEVQVLDYPELKTP*GQKEVGPHPVSGSF Trigger: AAACGAACCAGACACGGGATGAGGGCCAACCTCCTTCTGTCCCCATGGAGTCTTCAGTTCTGGGTAGTCAAGGACCTGCACCTCTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR TCA 90 bp | CCCACCCACTTGAGAGAATCAGATGCCTATGGACAGGTCAATAGATaGGGAGGAAGGAAGGGCCCAGGCTCCTCCCAGAGGCATTTGACT | + |
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Preference number: 1 (lower is better) Translates to: PTHLRESDAYGQVNR*GGRKGPGSSQRHLT Trigger: AGTCAAATGCCTCTGGGAGGAGCCTGGGCCCTTCCTTCCTCCTCATCTATTGACCTGTCCATAGGCATCTGATTCTCTCAAGTGGGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CCA 90 bp | TGCTCTGCTTGTGAGACAAAATGGCCTCCCATTGATAGGACAGGCTaGACTAAGATGGCAGAACATTCCCTCCAACCACAGCTCCCCCTA | + |
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Preference number: 1 (lower is better) Translates to: CSACETKWPPIDRTG*TKMAEHSLQPQLPL Trigger: TAGGGGGAGCTGTGGTTGGAGGGAATGTTCTGCCATCTTAGTCCAGCCTGTCCTATCAATGGGAGGCCATTTTGTCTCACAAGCAGAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CCA 90 bp | CTTGATGAAACTGAGCTGGTTTGCAATGAGTTGGGAAGAAGGCTATaGGCTCCTCTCCCTGAGGATAGTGCAGATGCTCACTGGGATGCA | + |
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Preference number: 1 (lower is better) Translates to: LDETELVCNELGRRL*APLPEDSADAHWDA Trigger: TGCATCCCAGTGAGCATCTGCACTATCCTCAGGGAGAGGAGCCCATAGCCTTCTTCCCAACTCATTGCAAACCAGCTCAGTTTCATCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CCA 90 bp | CCAACTCACAGTGACTTGATGAAACTGAGCTGGTTTGCAATGAGTTaGGAAGAAGGCTATGGGCTCCTCTCCCTGAGGATAGTGCAGATG | + |
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Preference number: 1 (lower is better) Translates to: PTHSDLMKLSWFAMS*EEGYGLLSLRIVQM Trigger: CATCTGCACTATCCTCAGGGAGAGGAGCCCATAGCCTTCTTCCCAACTCATTGCAAACCAGCTCAGTTTCATCAAGTCACTGTGAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR GCA 90 bp | AGGCTCCTCCCAGAGGCATTTGACTCTGACCCTCTTAACATGAACTaGTTCCTTACACTGCACCAAGGCATCCAATTTCTGATGTCACAG | + |
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Preference number: 1 (lower is better) Translates to: RLLPEAFDSDPLNMN*FLTLHQGIQFLMSQ Trigger: CTGTGACATCAGAAATTGGATGCCTTGGTGCAGTGTAAGGAAGCAGTTCATGTTAAGAGGGTCAGAGTCAAATGCCTCTGGGAGGAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CCA 90 bp | GGTGCAGTGAATGCAGCAATCTTCTGCTCTGCTTGTGAGACAAAATaGCCTCCCATTGATAGGACAGGCTGGACTAAGATGGCAGAACAT | + |
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Preference number: 1 (lower is better) Translates to: GAVNAAIFCSACETK*PPIDRTGWTKMAEH Trigger: ATGTTCTGCCATCTTAGTCCAGCCTGTCCTATCAATGGGAGGCCATTTTGTCTCACAAGCAGAGCAGAAGATTGCTGCATTCACTGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR TCA 90 bp | AAGACTAACCCTCAAAATGGTCTTTCTTGTAGAACAGTCACTCCCTaGGATGTCCTTCTGGGCTCTTCCTTCTGCCTCATGCTATGCTTT | + |
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Preference number: 1 (lower is better) Translates to: KTNPQNGLSCRTVTP*DVLLGSSFCLMLCF Trigger: AAAGCATAGCATGAGGCAGAAGGAAGAGCCCAGAAGGACATCTCAGGGAGTGACTGTTCTACAAGAAAGACCATTTTGAGGGTTAGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR GCA 90 bp | TTATTACGAGATGGGCTGGCAAAGGTGAGAAAAGTCAAAGGGCCATaGCTTTACTATAGAATCCCCAACAGAATTGGGATTTGGCACGTG | + |
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Preference number: 1 (lower is better) Translates to: LLRDGLAKVRKVKGP*LYYRIPNRIGIWHV Trigger: CACGTGCCAAATCCCAATTCTGTTGGGGATTCTATAGTAAAGGCATGGCCCTTTGACTTTTCTCACCTTTGCCAGCCCATCTCGTAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR TCA 90 bp | CCTGTTTTCATTTCTTCACTTCCTACTGCTTCACTTTCCTATCCATaGACTCCCAGTCTAATTTCTCATCCTTGTTGCCAAGAAGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: PVFISSLPTASLSYP*TPSLISHPCCQEAG Trigger: CCCTGCTTCTTGGCAACAAGGATGAGAAATTAGACTGGGAGTTCATGGATAGGAAAGTGAAGCAGTAGGAAGTGAAGAAATGAAAACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CCA 90 bp | CCAAGTACAATTCTATGTCCATTAGGGTCCAAGTTTATTACGAGATaGGCTGGCAAAGGTGAGAAAAGTCAAAGGGCCATGCCTTTACTA | + |
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Preference number: 1 (lower is better) Translates to: PSTILCPLGSKFITR*AGKGEKSQRAMPLL Trigger: TAGTAAAGGCATGGCCCTTTGACTTTTCTCACCTTTGCCAGCCCATCTCGTAATAAACTTGGACCCTAATGGACATAGAATTGTACTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CCA 90 bp | GGGACAGGGAACAATAATGTCTCTGGTCTTGAATTAGCAAATCTGTaGGGAGATGAATTGAGCTCTTATATAAAGAAGACTGGATGGAAG | + |
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Preference number: 1 (lower is better) Translates to: GTGNNNVSGLELANL*GDELSSYIKKTGWK Trigger: CTTCCATCCAGTCTTCTTTATATAAGAGCTCAATTCATCTCCCCACAGATTTGCTAATTCAAGACCAGAGACATTATTGTTCCCTGTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR TCA 90 bp | GTAAAAGAAAGGGCATGGGGGCTCCCTGCTTGGCCCAGTAGAGCACACCAGGGCAGCGCCCTCTGTGACTaGGAGGGATGGGAGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: VKERAWGLPAWPSRAHQGSALCD*EGWEMG Trigger: TCCCATCTCCCATCCCTCTCAGTCACAGAGGGCGCT...GCCCTGGTGTGCTCTACTGGGCCAAGCAGGGAGCCCCCATGCCCTTTCTTTTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCTCTTCCTTCTGCCTCATGCTATGCTTTTCCTGCGTCTACCTCCTTTGCAGGGGTGGGGAGAGGTaGAGGTCCTTGACTACCCAG | + |
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Preference number: 2 (lower is better) Translates to: LGSSFCLMLCFSCVYLLCRGGER*RSLTTQ Trigger: CTGGGTAGTCAAGGACCTGCACCTCTCCCCACCCCT...GCAAAGGAGGTAGACGCAGGAAAAGCATAGCATGAGGCAGAAGGAAGAGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CAA 90 bp | AATACAAGAAGGGACATGAGGGAGTCAGGAGGCATGGCATCAACCTaGACTCTCTCCATTTTCTGCCCTGTGGTCCCCAGTACCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: NTRRDMRESGGMAST*TLSIFCPVVPSTLP Trigger: AGGGAGGGTACTGGGGACCACAGGGCAGAAAATGGAGAGAGTCAAGGTTGATGCCATGCCTCCTGACTCCCTCATGTCCCTTCTTGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCTCTTCCTTCTGCCTCATGCTATGCTTTTCCTGCGTCTACCTCCTTTGCACTCTCTCCATTTTCTaGCCTGTGGTCCCCAGTACC | + |
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Preference number: 2 (lower is better) Translates to: LGSSFCLMLCFSCVYLLCTLSIF*PVVPST Trigger: GGTACTGGGGACCACAGGGCAGAAAATGGAGAGAGT...GCAAAGGAGGTAGACGCAGGAAAAGCATAGCATGAGGCAGAAGGAAGAGCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCTCTTCCTTCTGCCTCATGCTATGCTTTTCCTGCGTCTACCTCCTTTGCTTGGAAACAGCATCATaGGATGCCACCCCAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LGSSFCLMLCFSCVYLLCLETAS*DATPER Trigger: CCTCTCTGGGGTGGCATCCCATGATGCTGTTTCCAA...GCAAAGGAGGTAGACGCAGGAAAAGCATAGCATGAGGCAGAAGGAAGAGCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR CCA 90 bp | GTAGAACAGTCACTCCCTGAGATGTCCTTCTGGGCTCTTCCTTCTGCCTCATGCACAAAGAGCCTGGTGTaGGCTCCAACTCACAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: VEQSLPEMSFWALPSASCTKSLV*APTHSD Trigger: GTCACTGTGAGTTGGAGCCCACACCAGGCTCTTTGT...GCATGAGGCAGAAGGAAGAGCCCAGAAGGACATCTCAGGGAGTGACTGTTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR TCA 90 bp | CTGATTGGATCAGAGAGCGGTTGCTTGGAAACAGCATCATGGGATGCCACCCCAGCATGGCATCAACCTTaGCTCTCTCCATTTTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LIGSESGCLETASWDATPAWHQP*LSPFSA Trigger: GGCAGAAAATGGAGAGAGTCAAGGTTGATGCCATGC...TGGGGTGGCATCCCATGATGCTGTTTCCAAGCAACCGCTCTCTGATCCAATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR TCA 90 bp | GTAAAAGAAAGGGCATGGGGGCTCCCTGCTTGGCCCAGTAGAGCACACCAGGGCTCACTTTCCTATCCATaGACTCCCAGTCTAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: VKERAWGLPAWPSRAHQGSLSYP*TPSLIS Trigger: AGAAATTAGACTGGGAGTTCATGGATAGGAAAGTGA...GCCCTGGTGTGCTCTACTGGGCCAAGCAGGGAGCCCCCATGCCCTTTCTTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCAACAGGAGGCATCTCTGGTGCAGGGTGGTATGAAAATGTGGACTCCAGTTAACAGCATCATGGGATaGCACCCCAGAGAGGAATTC | + |
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Preference number: 2 (lower is better) Translates to: AQQEASLVQGGMKMWTPVNSIMG*HPREEF Trigger: GAATTCCTCTCTGGGGTGGCATCCCATGATGCTGTT...AACTGGAGTCCACATTTTCATACCACCCTGCACCAGAGATGCCTCCTGTTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR TCA 90 bp | CTGATTGGATCAGAGAGCGGTTGCTTGGAAACAGCATCATGGGATGCCACCCCACTGACCCTCTTAACATaGACTGCTTCCTTACACTGC | + |
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Preference number: 2 (lower is better) Translates to: LIGSESGCLETASWDATPLTLLT*TASLHC Trigger: GCAGTGTAAGGAAGCAGTTCATGTTAAGAGGGTCAG...TGGGGTGGCATCCCATGATGCTGTTTCCAAGCAACCGCTCTCTGATCCAATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR TCA 90 bp | GTAAAAGAAAGGGCATGGGGGCTCCCTGCTTGGCCCAGTAGAGCACACCAGGGCCCATTCTCTTTTACCTaGCACCTAATCCATTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: VKERAWGLPAWPSRAHQGPFSFT*HLIHSL Trigger: TAAAGAATGGATTAGGTGTCAGGTAAAAGAGAATGG...GCCCTGGTGTGCTCTACTGGGCCAAGCAGGGAGCCCCCATGCCCTTTCTTTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGACAGGGGAATGGAAGCACAAAGGCACAGACAACCACAGATATACCACACTGGGATGCAGGCTCTaGTTGGATCAGAGAGCGGTT | + |
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Preference number: 2 (lower is better) Translates to: KRTGEWKHKGTDNHRYTTLGCRL*LDQRAV Trigger: AACCGCTCTCTGATCCAATCAGAGCCTGCATCCCAG...TGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGCTTCCATTCCCCTGTCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR GCA 90 bp | GTAGAACAGTCACTCCCTGAGATGTCCTTCTGGGCTCTTCCTTCTGCCTCATGCACTGCTTCCTTACACTaGACCAAGGCATCCAATTTC | + |
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Preference number: 2 (lower is better) Translates to: VEQSLPEMSFWALPSASCTASLH*TKASNF Trigger: GAAATTGGATGCCTTGGTGCAGTGTAAGGAAGCAGT...GCATGAGGCAGAAGGAAGAGCCCAGAAGGACATCTCAGGGAGTGACTGTTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CAA 90 bp | ATGCAGCAATCTTCTGCTCTGCTTGTGAGACAAAATGGCCTCCCATaGATAGGACAGGCTGGACTAAGATGGCAGAACATTCCCTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: MQQSSALLVRQNGLP*IGQAGLRWQNIPSN Trigger: GTTGGAGGGAATGTTCTGCCATCTTAGTCCAGCCTGTCCTATCAATGGGAGGCCATTTTGTCTCACAAGCAGAGCAGAAGATTGCTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCTAAAGCGACTTCTGCCACCATGGTTTTGGCCAATCTGTGCTAGATGGGGGGGTCAATCTAGCTCTTaGATCAAGACATCTTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: ELKRLLPPWFWPICARWGGQSSS*IKTSSQ Trigger: TTGGGAAGATGTCTTGATTCAAGAGCTAGATTGACC...CCCCCATCTAGCACAGATTGGCCAAAACCATGGTGGCAGAAGTCGCTTTAGCTC 49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR CCA 90 bp | GCACAAAGGCACAGACAACCACAGATATACCACATAGCTTTTCAAGGGATAAGCACACCAGGGCTTCTCTaGGGAAGCACTCTGGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: AQRHRQPQIYHIAFQGISTPGLL*GSTLGQ Trigger: TTGACCCAGAGTGCTTCCCCAGAGAAGCCCTGGTGT...GCTTATCCCTTGAAAAGCTATGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CAA 90 bp | AGCACACCAGGGCTTCTCTGGGGAAGCACTCTGGGTCAAAGTCGCTaGTGTCCAGGGCCTAATCTCATTGAAATGAATTCTGTATATTTG | + |
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Preference number: 2 (lower is better) Translates to: STPGLLWGSTLGQSR*CPGPNLIEMNSVYL Trigger: CAAATATACAGAATTCATTTCAATGAGATTAGGCCCTGGACACAAGCGACTTTGACCCAGAGTGCTTCCCCAGAGAAGCCCTGGTGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR TCA 90 bp | CTTCAAATCACAGCAGTTACTAACAGAACACCTGACATCTGGACATTCACCAGCTTGACTACCCAGAACTaGAGACTCCATGGGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: LQITAVTNRTPDIWTFTSLTTQN*RLHGDR Trigger: TCTGTCCCCATGGAGTCTTCAGTTCTGGGTAGTCAA...GCTGGTGAATGTCCAGATGTCAGGTGTTCTGTTAGTAACTGCTGTGATTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR GCA 90 bp | CACATTGTTGAGATTGCCAAGCTTCCATCAGACCAGAAAGCTGAAAGAGTGAAACCGAGGTGCAGTGAATaGAGCAATCTTCTGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: HIVEIAKLPSDQKAERVKPRCSE*SNLLLC Trigger: GCAGAGCAGAAGATTGCTGCATTCACTGCACCTCGG...TTTCACTCTTTCAGCTTTCTGGTCTGATGGAAGCTTGGCAATCTCAACAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CAA 90 bp | CGCTTGTGTCCAGGGCCTAATCTCATTGAAATGAATTCTGTATATTaGGGGGTTGGCACAAGAGAAGGAGTAAGGTACCAGCTACTGCTT | + |
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Preference number: 2 (lower is better) Translates to: RLCPGPNLIEMNSVY*GVGTREGVRYQLLL Trigger: AAGCAGTAGCTGGTACCTTACTCCTTCTCTTGTGCCAACCCCCAAATATACAGAATTCATTTCAATGAGATTAGGCCCTGGACACAAGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCTCAGAGCATCCTCGGGGAATAAGGAAATGAGACATAGACATTTTAAAGTCATGGGCTGGCAAAGGTaGGAAAAGTCAAAGGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PLRASSGNKEMRHRHFKVMGWQR*EKSKGH Trigger: ATGGCCCTTTGACTTTTCTCACCTTTGCCAGCCCAT...GACTTTAAAATGTCTATGTCTCATTTCCTTATTCCCCGAGGATGCTCTGAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR GCA 90 bp | AACTTCAAATCACAGCAGTTACTAACAGAACACCTGACATCTGGACATTCACCACTCCCAATCCTCTCATaGACACAGCAATGCGATGCC | + |
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Preference number: 2 (lower is better) Translates to: NFKSQQLLTEHLTSGHSPLPILS*TQQCDA Trigger: GGCATCGCATTGCTGTGTGCATGAGAGGATTGGGAG...TGGTGAATGTCCAGATGTCAGGTGTTCTGTTAGTAACTGCTGTGATTTGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR CCA 90 bp | GCATTTGACTCTGACCCTCTTAACATGAACTGCTTCCTTACACTGCACCAAGGCGTGTCTGGTTCGTTTTaGATGAAGTGTAAGAACGAC | + |
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Preference number: 2 (lower is better) Translates to: AFDSDPLNMNCFLTLHQGVSGSF*MKCKND Trigger: GTCGTTCTTACACTTCATCCAAAACGAACCAGACAC...GCCTTGGTGCAGTGTAAGGAAGCAGTTCATGTTAAGAGGGTCAGAGTCAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCAGAGCATCCTCGGGGAATAAGGAAATGAGACATAGACATTTTAAAGTCCAGAGAGCGGTTGCTTaGAAACAGCATCATGGGATG | + |
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Preference number: 2 (lower is better) Translates to: PLRASSGNKEMRHRHFKVQRAVA*KQHHGM Trigger: CATCCCATGATGCTGTTTCCAAGCAACCGCTCTCTG...GACTTTAAAATGTCTATGTCTCATTTCCTTATTCCCCGAGGATGCTCTGAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR CCA 90 bp | CACATTGTTGAGATTGCCAAGCTTCCATCAGACCAGAAAGCTGAAAGAGTGAAACTGCCACCATGGTTTTaGCCAATCTGTGCTAGATGG | + |
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Preference number: 2 (lower is better) Translates to: HIVEIAKLPSDQKAERVKLPPWF*PICARW Trigger: CCATCTAGCACAGATTGGCCAAAACCATGGTGGCAG...TTTCACTCTTTCAGCTTTCTGGTCTGATGGAAGCTTGGCAATCTCAACAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR TCA 90 bp | AACTTCAAATCACAGCAGTTACTAACAGAACACCTGACATCTGGACATTCACCATGGTGCAGGGTGGTATaGAAATGTGGACTCCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: NFKSQQLLTEHLTSGHSPWCRVV*KCGLQF Trigger: GAACTGGAGTCCACATTTTCATACCACCCTGCACCA...TGGTGAATGTCCAGATGTCAGGTGTTCTGTTAGTAACTGCTGTGATTTGAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR CCA 90 bp | AACTTCAAATCACAGCAGTTACTAACAGAACACCTGACATCTGGACATTCACCAGATGCAGGCTCTGATTaGATCAGAGAGCGGTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: NFKSQQLLTEHLTSGHSPDAGSD*IRERLL Trigger: AAGCAACCGCTCTCTGATCCAATCAGAGCCTGCATC...TGGTGAATGTCCAGATGTCAGGTGTTCTGTTAGTAACTGCTGTGATTTGAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR CCA 90 bp | AACTTCAAATCACAGCAGTTACTAACAGAACACCTGACATCTGGACATTCACCATGGGTTAGGGACACTTaGGTGATTCTACTGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: NFKSQQLLTEHLTSGHSPWVRDT*VILLAT Trigger: TGTGGCCAGTAGAATCACCCAAGTGTCCCTAACCCA...TGGTGAATGTCCAGATGTCAGGTGTTCTGTTAGTAACTGCTGTGATTTGAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR GCA 90 bp | AAAAGGACAGGGGAATGGAAGCACAAAGGCACAGACAACCACAGATATACCACATTCTTCACTTCCTACTaGTTCACTTTCCTATCCATG | + |
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Preference number: 2 (lower is better) Translates to: KRTGEWKHKGTDNHRYTTFFTSY*FTFLSM Trigger: CATGGATAGGAAAGTGAAGCAGTAGGAAGTGAAGAA...TGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGCTTCCATTCCCCTGTCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR CCA 90 bp | GTCAATCTAGCTCTTGAATCAAGACATCTTCCCAAGTACAATTCTATGTCCATTGAACTGAAGACTCCATaGGGACAGAAGGAGGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: VNLALESRHLPKYNSMSIELKTP*GQKEVG Trigger: GCCAACCTCCTTCTGTCCCCATGGAGTCTTCAGTTC...AATGGACATAGAATTGTACTTGGGAAGATGTCTTGATTCAAGAGCTAGATTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR CCA 90 bp | GCACAAAGGCACAGACAACCACAGATATACCACATAGCTTTTCAAGGGATAAGCTGTATATTTGGGGGTTaGCACAAGAGAAGGAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: AQRHRQPQIYHIAFQGISCIFGG*HKRRSK Trigger: CTTACTCCTTCTCTTGTGCCAACCCCCAAATATACA...GCTTATCCCTTGAAAAGCTATGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR CCA 90 bp | CACATTGTTGAGATTGCCAAGCTTCCATCAGACCAGAAAGCTGAAAGAGTGAAAAATCCCCAACAGAATTaGGATTTGGCACGTGAAACA | + |
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Preference number: 2 (lower is better) Translates to: HIVEIAKLPSDQKAERVKNPQQN*DLARET Trigger: TGTTTCACGTGCCAAATCCCAATTCTGTTGGGGATT...TTTCACTCTTTCAGCTTTCTGGTCTGATGGAAGCTTGGCAATCTCAACAATGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR TCA 90 bp | GCACAAAGGCACAGACAACCACAGATATACCACATAGCTTTTCAAGGGATAAGCCGGGGAATAAGGAAATaGGACATAGACATTTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: AQRHRQPQIYHIAFQGISRGIRK*DIDILK Trigger: CTTTAAAATGTCTATGTCTCATTTCCTTATTCCCCG...GCTTATCCCTTGAAAAGCTATGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CAA 90 bp | AATAATGTCTCTGGTCTTGAATTAGCAAATCTGTGGGGAGATGAATaGAGCTCTTATATAAAGAAGACTGGATGGAAGCTGGCTCTGATC | + |
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Preference number: 2 (lower is better) Translates to: NNVSGLELANLWGDE*SSYIKKTGWKLALI Trigger: GATCAGAGCCAGCTTCCATCCAGTCTTCTTTATATAAGAGCTCAATTCATCTCCCCACAGATTTGCTAATTCAAGACCAGAGACATTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR-3UTR CCA 90 bp | GTCAATCTAGCTCTTGAATCAAGACATCTTCCCAAGTACAATTCTATGTCCATTAAGTTTATTACGAGATaGGCTGGCAAAGGTGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VNLALESRHLPKYNSMSIKFITR*AGKGEK Trigger: TTTCTCACCTTTGCCAGCCCATCTCGTAATAAACTT...AATGGACATAGAATTGTACTTGGGAAGATGTCTTGATTCAAGAGCTAGATTGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR TCA 72 bp | GGTGGGGAGAGGTGCAGGTCCTTGACTACCCAGAACTaGAGACTCCATGGGGACAGAAGGAGGTTGGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GGERCRSLTTQN*RLHGDRRRLAL Trigger: GAGGGCCAACCTCCTTCTGTCCCCATGGAGTCTTCAGTTCTGGGTAGTCAAGGACCTGCACCTCTCCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR GCA 72 bp | ACTGGGATGCAGGCTCTGATTGGATCAGAGAGCGGTTaGTTGGAAACAGCATCATGGGATGCCACCCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TGMQALIGSESG*LETASWDATPE Trigger: CTCTGGGGTGGCATCCCATGATGCTGTTTCCAAGCAACCGCTCTCTGATCCAATCAGAGCCTGCATCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CCA 72 bp | AGTAGAGCACACCAGGGCTTCTCTGGGGAAGCACTCTaGGTCAAAGTCGCTTGTGTCCAGGGCCTAATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SRAHQGFSGEAL*VKVACVQGLIS Trigger: TGAGATTAGGCCCTGGACACAAGCGACTTTGACCCAGAGTGCTTCCCCAGAGAAGCCCTGGTGTGCTCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CCA 72 bp | CCCAGAACTGAAGACTCCATGGGGACAGAAGGAGGTTaGCCCTCATCCCGTGTCTGGTTCGTTTTGGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: PRTEDSMGTEGG*PSSRVWFVLDE Trigger: TTCATCCAAAACGAACCAGACACGGGATGAGGGCCAACCTCCTTCTGTCCCCATGGAGTCTTCAGTTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR GCA 72 bp | CTGGGCTCTTCCTTCTGCCTCATGCTATGCTTTTCCTaGGTCTACCTCCTTTGCTACGTGAAAACATCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LGSSFCLMLCFS*VYLLCYVKTSP Trigger: GGGGGATGTTTTCACGTAGCAAAGGAGGTAGACGCAGGAAAAGCATAGCATGAGGCAGAAGGAAGAGCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR GCA 72 bp | CCTGAGATGTCCTTCTGGGCTCTTCCTTCTGCCTCATaGTATGCTTTTCCTGCGTCTACCTCCTTTGCTACG | + |
|
Preference number: 3 (lower is better) Translates to: PEMSFWALPSAS*YAFPASTSFAT Trigger: CGTAGCAAAGGAGGTAGACGCAGGAAAAGCATAGCATGAGGCAGAAGGAAGAGCCCAGAAGGACATCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CCA 72 bp | ACTGAGCTGGTTTGCAATGAGTTGGGAAGAAGGCTATaGGCTCCTCTCCCTGAGGATAGTGCAGATGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TELVCNELGRRL*APLPEDSADAH Trigger: GTGAGCATCTGCACTATCCTCAGGGAGAGGAGCCCATAGCCTTCTTCCCAACTCATTGCAAACCAGCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CCA 72 bp | AGGAATGAGCTAAAGCGACTTCTGCCACCATGGTTTTaGCCAATCTGTGCTAGATGGGGGCTAGAGCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RNELKRLLPPWF*PICARWGLEQG Trigger: CCCTTGCTCTAGCCCCCATCTAGCACAGATTGGCCAAAACCATGGTGGCAGAAGTCGCTTTAGCTCATTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGATTGGATCAGAGAGCGGTTGCTTGGAAACAGCATCATGGGATGCCACCCCAGGCATGGCATCAACCTaGACTCTCTCCATTTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LIGSESGCLETASWDATPGMAST*TLSIFC Trigger: GCAGAAAATGGAGAGAGTCAAGGTTGATGCCATGCC...TGGGGTGGCATCCCATGATGCTGTTTCCAAGCAACCGCTCTCTGATCCAATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR-3UTR CAA 90 bp | GAACTGCTTCCTTACACTGCACCAAGGCATCCAATTTCTGATGTCACAGCAGTCCACCTCTCTCCCCAATaGTGCACAGTGAGAGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: ELLPYTAPRHPISDVTAVHLSPQ*CTVRAP Trigger: GGGAGCTCTCACTGTGCACAATTGGGGAGAGAGGTG...GACTGCTGTGACATCAGAAATTGGATGCCTTGGTGCAGTGTAAGGAAGCAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR TCA 72 bp | ACTCAGCACCAGGGAAGTGGGTTAGGGACACTTGGGTaGTTCTACTGGCCACAGCAATATCAACAATGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TQHQGSGLGTLG*FYWPQQYQQWW Trigger: CCACCATTGTTGATATTGCTGTGGCCAGTAGAATCACCCAAGTGTCCCTAACCCACTTCCCTGGTGCTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR TCA 72 bp | TGCTATGCTTTTCCTGCGTCTACCTCCTTTGCTACGTaGAAACATCCCCCACTGGCCATTCCCACATCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: CYAFPASTSFAT*KHPPLAIPTSQ Trigger: CTGAGATGTGGGAATGGCCAGTGGGGGATGTTTTCACGTAGCAAAGGAGGTAGACGCAGGAAAAGCATAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CCA 72 bp | GGTGGAAGCCCAACAGGAGGCATCTCTGGTGCAGGGTaGTATGAAAATGTGGACTCCAGTTCTAACGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GGSPTGGISGAG*YENVDSSSNVS Trigger: ACTTACGTTAGAACTGGAGTCCACATTTTCATACCACCCTGCACCAGAGATGCCTCCTGTTGGGCTTCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR TCA 72 bp | CACACACACCCACACAAACATATGCACAAACACAGATaGCAAAGAGCCTGGTGTGGGCTCCAACTCACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HTHPHKHMHKHR*QRAWCGLQLTV Trigger: CACTGTGAGTTGGAGCCCACACCAGGCTCTTTGTCATCTGTGTTTGTGCATATGTTTGTGTGGGTGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR GCA 72 bp | GATGTCCTTCTGGGCTCTTCCTTCTGCCTCATGCTATaGTTTTCCTGCGTCTACCTCCTTTGCTACGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: DVLLGSSFCLML*FSCVYLLCYVK Trigger: TTTCACGTAGCAAAGGAGGTAGACGCAGGAAAAGCATAGCATGAGGCAGAAGGAAGAGCCCAGAAGGACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CCA 72 bp | TGGGCTCCAACTCACAGTGACTTGATGAAACTGAGCTaGTTTGCAATGAGTTGGGAAGAAGGCTATGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: WAPTHSDLMKLS*FAMSWEEGYGL Trigger: GAGCCCATAGCCTTCTTCCCAACTCATTGCAAACCAGCTCAGTTTCATCAAGTCACTGTGAGTTGGAGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CCA 72 bp | TGTGTTAGGAATGAGCTAAAGCGACTTCTGCCACCATaGTTTTGGCCAATCTGTGCTAGATGGGGGCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CVRNELKRLLPP*FWPICARWGLE Trigger: CTCTAGCCCCCATCTAGCACAGATTGGCCAAAACCATGGTGGCAGAAGTCGCTTTAGCTCATTCCTAACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CCA 72 bp | TGTGAGACAAAATGGCCTCCCATTGATAGGACAGGCTaGACTAAGATGGCAGAACATTCCCTCCAACCACAG | + |
|
Preference number: 3 (lower is better) Translates to: CETKWPPIDRTG*TKMAEHSLQPQ Trigger: CTGTGGTTGGAGGGAATGTTCTGCCATCTTAGTCCAGCCTGTCCTATCAATGGGAGGCCATTTTGTCTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGGACAGGGGAATGGAAGCACAAAGGCACAGACAACCACAGATATACCACAGATGTTGGGGATAGATaGGATCTTGGGACACCACCC | + |
|
Preference number: 3 (lower is better) Translates to: KRTGEWKHKGTDNHRYTTDVGDR*DLGTPP Trigger: GGGTGGTGTCCCAAGATCCAATCTATCCCCAACATC...TGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGCTTCCATTCCCCTGTCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR TCA 72 bp | ACTGCTTCCTTACACTGCACCAAGGCATCCAATTTCTaGTGTCACAGCAGTCTACACCTCTCTCCCCAATTG | + |
|
Preference number: 3 (lower is better) Translates to: TASLHCTKASNF*CHSSLHLSPQL Trigger: CAATTGGGGAGAGAGGTGTAGACTGCTGTGACATCAGAAATTGGATGCCTTGGTGCAGTGTAAGGAAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR TCA 72 bp | GATGACAAAGAGCCTGGTGTGGGCTCCAACTCACAGTaGCTTGATGAAACTGAGCTGGTTTGCAATGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: DDKEPGVGSNSQ*LDETELVCNEL Trigger: CAACTCATTGCAAACCAGCTCAGTTTCATCAAGTCACTGTGAGTTGGAGCCCACACCAGGCTCTTTGTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR TCA 72 bp | CCTCAAAATGGTCTTTCTTGTAGAACAGTCACTCCCTaGGATGTCCTTCTGGGCTCTTCCTTCTGCCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: PQNGLSCRTVTP*DVLLGSSFCLM Trigger: CATGAGGCAGAAGGAAGAGCCCAGAAGGACATCTCAGGGAGTGACTGTTCTACAAGAAAGACCATTTTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CCA 72 bp | AGTGACTTGATGAAACTGAGCTGGTTTGCAATGAGTTaGGAAGAAGGCTATGGGCTCCTCTCCCTGAGGATA | + |
|
Preference number: 3 (lower is better) Translates to: SDLMKLSWFAMS*EEGYGLLSLRI Trigger: TATCCTCAGGGAGAGGAGCCCATAGCCTTCTTCCCAACTCATTGCAAACCAGCTCAGTTTCATCAAGTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CCA 72 bp | GAAAACTCAGCACCAGGGAAGTGGGTTAGGGACACTTaGGTGATTCTACTGGCCACAGCAATATCAACAATG | + |
|
Preference number: 3 (lower is better) Translates to: ENSAPGKWVRDT*VILLATAISTM Trigger: CATTGTTGATATTGCTGTGGCCAGTAGAATCACCCAAGTGTCCCTAACCCACTTCCCTGGTGCTGAGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR-3UTR CAA 90 bp | GCACAAAGGCACAGACAACCACAGATATACCACATAGCTTTTCAAGGGATAAGCCTGCGTCTACCTCCTTaGCTACGTGAAAACATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: AQRHRQPQIYHIAFQGISLRLPP*LRENIP Trigger: GGGGATGTTTTCACGTAGCAAAGGAGGTAGACGCAG...GCTTATCCCTTGAAAAGCTATGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR GCA 72 bp | CCAGAGGCATTTGACTCTGACCCTCTTAACATGAACTaGTTCCTTACACTGCACCAAGGCATCCAATTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PEAFDSDPLNMN*FLTLHQGIQFL Trigger: CAGAAATTGGATGCCTTGGTGCAGTGTAAGGAAGCAGTTCATGTTAAGAGGGTCAGAGTCAAATGCCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CCA 72 bp | ATTTGTAGAGTGAAAGAAAACTCAGCACCAGGGAAGTaGGTTAGGGACACTTGGGTGATTCTACTGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: ICRVKENSAPGK*VRDTWVILLAT Trigger: TGTGGCCAGTAGAATCACCCAAGTGTCCCTAACCCACTTCCCTGGTGCTGAGTTTTCTTTCACTCTACAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CCA 72 bp | TTTCTTGTAGAACAGTCACTCCCTGAGATGTCCTTCTaGGCTCTTCCTTCTGCCTCATGCTATGCTTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FLVEQSLPEMSF*ALPSASCYAFP Trigger: AGGAAAAGCATAGCATGAGGCAGAAGGAAGAGCCCAGAAGGACATCTCAGGGAGTGACTGTTCTACAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTCAGAGCATCCTCGGGGAATAAGGAAATGAGACATAGACATTTTAAAGTCTCCTCCCAGAGGCATTaGACTCTGACCCTCTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: PLRASSGNKEMRHRHFKVSSQRH*TLTLLT Trigger: TGTTAAGAGGGTCAGAGTCAAATGCCTCTGGGAGGA...GACTTTAAAATGTCTATGTCTCATTTCCTTATTCCCCGAGGATGCTCTGAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAAATCACAGCAGTTACTAACAGAACACCTGACATCTGGACATTCACCAGCTGCTTGACCCACACATaGTTGAGATTGCCAAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LQITAVTNRTPDIWTFTSCLTHT*LRLPSF Trigger: GAAGCTTGGCAATCTCAACAATGTGTGGGTCAAGCA...GCTGGTGAATGTCCAGATGTCAGGTGTTCTGTTAGTAACTGCTGTGATTTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR GCA 72 bp | GATGGGCTGGCAAAGGTGAGAAAAGTCAAAGGGCCATaGCTTTACTATAGAATCCCCAACAGAATTGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: DGLAKVRKVKGP*LYYRIPNRIGI Trigger: AATCCCAATTCTGTTGGGGATTCTATAGTAAAGGCATGGCCCTTTGACTTTTCTCACCTTTGCCAGCCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CCA 72 bp | ATTCTATGTCCATTAGGGTCCAAGTTTATTACGAGATaGGCTGGCAAAGGTGAGAAAAGTCAAAGGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: ILCPLGSKFITR*AGKGEKSQRAM Trigger: CATGGCCCTTTGACTTTTCTCACCTTTGCCAGCCCATCTCGTAATAAACTTGGACCCTAATGGACATAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR-3UTR CAA 90 bp | CACATTGTTGAGATTGCCAAGCTTCCATCAGACCAGAAAGCTGAAAGAGTGAAACCAACTCACAGTGACTaGATGAAACTGAGCTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: HIVEIAKLPSDQKAERVKPTHSD*MKLSWF Trigger: AAACCAGCTCAGTTTCATCAAGTCACTGTGAGTTGG...TTTCACTCTTTCAGCTTTCTGGTCTGATGGAAGCTTGGCAATCTCAACAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAAATCACAGCAGTTACTAACAGAACACCTGACATCTGGACATTCACCAGCCTGTGGGGAGATGAATaGAGCTCTTATATAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LQITAVTNRTPDIWTFTSLWGDE*SSYIKK Trigger: CTTCTTTATATAAGAGCTCAATTCATCTCCCCACAG...GCTGGTGAATGTCCAGATGTCAGGTGTTCTGTTAGTAACTGCTGTGATTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR-3UTR CAA 90 bp | CACATTGTTGAGATTGCCAAGCTTCCATCAGACCAGAAAGCTGAAAGAGTGAAACCTCTGGGGAAATTCTaGAAGACTAACCCTCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: HIVEIAKLPSDQKAERVKPLGKF*KTNPQN Trigger: ATTTTGAGGGTTAGTCTTCAAGAATTTCCCCAGAGG...TTTCACTCTTTCAGCTTTCTGGTCTGATGGAAGCTTGGCAATCTCAACAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGTCAGGAGGCATGGCATCAACCTTGACTCTCTCCATTTTCTGCCCTGTCCAGGGCCAGGTGGCTaGGGCAGCTTGCCCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGVRRHGINLDSLHFLPCPGPGG*GSLPTP Trigger: TGGAGTGGGCAAGCTGCCCCAGCCACCTGGCCCTGG...ACAGGGCAGAAAATGGAGAGAGTCAAGGTTGATGCCATGCCTCCTGACTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR GCA 90 bp | GCCCAACAGGAGGCATCTCTGGTGCAGGGTGGTATGAAAATGTGGACTCCAGTTGTGGCTGGGGCAGCTTaGCCACTCCAGAGAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQQEASLVQGGMKMWTPVVAGAA*PLQRGP Trigger: TGGCCCTCTCTGGAGTGGGCAAGCTGCCCCAGCCAC...AACTGGAGTCCACATTTTCATACCACCCTGCACCAGAGATGCCTCCTGTTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGTCAGGAGGCATGGCATCAACCTTGACTCTCTCCATTTTCTGCCCTGTGGCCCAGTGCCCCCATaGACCACAGCAGCCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: EGVRRHGINLDSLHFLPCGPVPP*TTAALT Trigger: CGTCAAGGCTGCTGTGGTCCATGGGGGCACTGGGCC...ACAGGGCAGAAAATGGAGAGAGTCAAGGTTGATGCCATGCCTCCTGACTCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGTCAGGAGGCATGGCATCAACCTTGACTCTCTCCATTTTCTGCCCTGTCTGACAGGGGGCGGGTaGAGGACCAGCTTTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGVRRHGINLDSLHFLPCLTGGG*RTSFGG Trigger: CCCACCAAAGCTGGTCCTCCACCCGCCCCCTGTCAG...ACAGGGCAGAAAATGGAGAGAGTCAAGGTTGATGCCATGCCTCCTGACTCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR TCA 90 bp | CTGATTGGATCAGAGAGCGGTTGCTTGGAAACAGCATCATGGGATGCCACCCCAGCTTTGGTGGGCGAGTaGGGCACACAGGCAATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LIGSESGCLETASWDATPALVGE*GTQAIP Trigger: CGGGATTGCCTGTGTGCCTCACTCGCCCACCAAAGC...TGGGGTGGCATCCCATGATGCTGTTTCCAAGCAACCGCTCTCTGATCCAATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGCTCTTCCTTCTGCCTCATGCTATGCTTTTCCTGCGTCTACCTCCTTTGCCCCGGGACTGGGCAATaGCCAGTCGCTGCAGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSSFCLMLCFSCVYLLCPGTGQ*PVAADW Trigger: CCAATCTGCAGCGACTGGCCATTGCCCAGTCCCGGG...GCAAAGGAGGTAGACGCAGGAAAAGCATAGCATGAGGCAGAAGGAAGAGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR CCA 90 bp | ACTCCATGGGGACAGAAGGAGGTTGGCCCTCATCCCGTGTCTGGTTCGTTTTGGATCTTCCCTGGAGGCTaGGTGCCTGTCTTGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPWGQKEVGPHPVSGSFWIFPGG*VPVLTP Trigger: TGGCGTCAAGACAGGCACCCAGCCTCCAGGGAAGAT...CCAAAACGAACCAGACACGGGATGAGGGCCAACCTCCTTCTGTCCCCATGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGTCAGGAGGCATGGCATCAACCTTGACTCTCTCCATTTTCTGCCCTGTGTCTTGCAGTCCGGATaGCCAGGCAAGGAGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGVRRHGINLDSLHFLPCVLQSG*PGKEWG Trigger: CCCCCACTCCTTGCCTGGCCATCCGGACTGCAAGAC...ACAGGGCAGAAAATGGAGAGAGTCAAGGTTGATGCCATGCCTCCTGACTCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR CCA 90 bp | GTAAAAGAAAGGGCATGGGGGCTCCCTGCTTGGCCCAGTAGAGCACACCAGGGCCCCCTTCTCGCTGTCTaGAAGGTAACAATGTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKERAWGLPAWPSRAHQGPLLAV*KVTMSW Trigger: CCACGACATTGTTACCTTCCAGACAGCGAGAAGGGG...GCCCTGGTGTGCTCTACTGGGCCAAGCAGGGAGCCCCCATGCCCTTTCTTTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR TCA 90 bp | ACTCCATGGGGACAGAAGGAGGTTGGCCCTCATCCCGTGTCTGGTTCGTTTTGGGGACCACAGCAGCCTTaGCGCTCATCACCAAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TPWGQKEVGPHPVSGSFWGPQQP*RSSPKH Trigger: GTGTTTTGGTGATGAGCGTCAAGGCTGCTGTGGTCC...CCAAAACGAACCAGACACGGGATGAGGGCCAACCTCCTTCTGTCCCCATGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR TCA 90 bp | GTAGAACAGTCACTCCCTGAGATGTCCTTCTGGGCTCTTCCTTCTGCCTCATGCAGCCAGAGGGGGCTGTaGGACGCTCCATACAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VEQSLPEMSFWALPSASCSQRGL*DAPYRW Trigger: CCATCTGTATGGAGCGTCTCACAGCCCCCTCTGGCT...GCATGAGGCAGAAGGAAGAGCCCAGAAGGACATCTCAGGGAGTGACTGTTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR GCA 90 bp | CTGATTGGATCAGAGAGCGGTTGCTTGGAAACAGCATCATGGGATGCCACCCCACGCTGGCGTTGGGTCTaGCTGTTGATCTGGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LIGSESGCLETASWDATPRWRWV*LLIWPM Trigger: CATGGGCCAGATCAACAGGCAGACCCAACGCCAGCG...TGGGGTGGCATCCCATGATGCTGTTTCCAAGCAACCGCTCTCTGATCCAATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR CCA 90 bp | GCATTTGACTCTGACCCTCTTAACATGAACTGCTTCCTTACACTGCACCAAGGCTGCTCCAGGGCCAGGTaGCTGGGGCAGCTTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AFDSDPLNMNCFLTLHQGCSRAR*LGQLAH Trigger: GTGGGCAAGCTGCCCCAGCCACCTGGCCCTGGAGCA...GCCTTGGTGCAGTGTAAGGAAGCAGTTCATGTTAAGAGGGTCAGAGTCAAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | CTGGGCTCTTCCTTCTGCCTCATGCTATGCTTTTCCTGCGTCTACCTCCTTTGCTGGGGCTGTCTTCCCTaGGCCTCGAATGGTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGSSFCLMLCFSCVYLLCWGCLP*ASNGAS Trigger: ACTGGCACCATTCGAGGCCCAGGGAAGACAGCCCCA...GCAAAGGAGGTAGACGCAGGAAAAGCATAGCATGAGGCAGAAGGAAGAGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CAA 72 bp | GGGATGCAGGCTCTGATTGGATCAGAGAGCGGTTGCTaGGAAACAGCATCATGGGATGCCACCCCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GMQALIGSESGC*ETASWDATPER Trigger: CCTCTCTGGGGTGGCATCCCATGATGCTGTTTCCAAGCAACCGCTCTCTGATCCAATCAGAGCCTGCATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR TCA 90 bp | GCCCAACAGGAGGCATCTCTGGTGCAGGGTGGTATGAAAATGTGGACTCCAGTTTTCCAATGGCAAAGATaGGACGGCGGTCCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQQEASLVQGGMKMWTPVFQWQR*DGGPRP Trigger: TGGCCTGGGACCGCCGTCTCATCTTTGCCATTGGAA...AACTGGAGTCCACATTTTCATACCACCCTGCACCAGAGATGCCTCCTGTTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR GCA 90 bp | GTAGAACAGTCACTCCCTGAGATGTCCTTCTGGGCTCTTCCTTCTGCCTCATGCCATGTTCTTTCGTACTaGTGGAGGCCCAGTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VEQSLPEMSFWALPSASCHVLSY*WRPSAP Trigger: GGGGGCACTGGGCCTCCAGCAGTACGAAAGAACATG...GCATGAGGCAGAAGGAAGAGCCCAGAAGGACATCTCAGGGAGTGACTGTTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | GAGGGAGTCAGGAGGCATGGCATCAACCTTGACTCTCTCCATTTTCTGCCCTGTGTTCTTTCGTACTGCTaGAGGCCCAGTGCCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EGVRRHGINLDSLHFLPCVLSYC*RPSAPM Trigger: CATGGGGGCACTGGGCCTCCAGCAGTACGAAAGAAC...ACAGGGCAGAAAATGGAGAGAGTCAAGGTTGATGCCATGCCTCCTGACTCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | GCCCAACAGGAGGCATCTCTGGTGCAGGGTGGTATGAAAATGTGGACTCCAGTTTCCCTGGGCCTCGAATaGTGCCAGTGGTGTCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQQEASLVQGGMKMWTPVSLGLE*CQWCLV Trigger: CACTAGACACCACTGGCACCATTCGAGGCCCAGGGA...AACTGGAGTCCACATTTTCATACCACCCTGCACCAGAGATGCCTCCTGTTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | ACTCCATGGGGACAGAAGGAGGTTGGCCCTCATCCCGTGTCTGGTTCGTTTTGGCCAGTCGCTGCAGATTaGACCGATTCAAAGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPWGQKEVGPHPVSGSFWPVAAD*TDSKWP Trigger: TGGCCACTTTGAATCGGTCCAATCTGCAGCGACTGG...CCAAAACGAACCAGACACGGGATGAGGGCCAACCTCCTTCTGTCCCCATGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR CCA 90 bp | GTAGAACAGTCACTCCCTGAGATGTCCTTCTGGGCTCTTCCTTCTGCCTCATGCTATCGGACTCGCCCGTaGTGCTGGAGGTTCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VEQSLPEMSFWALPSASCYRTRP*CWRFQW Trigger: CCATTGGAACCTCCAGCACCACGGGCGAGTCCGATA...GCATGAGGCAGAAGGAAGAGCCCAGAAGGACATCTCAGGGAGTGACTGTTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CAA 72 bp | AGGGACATGAGGGAGTCAGGAGGCATGGCATCAACCTaGACTCTCTCCATTTTCTGCCCTGTGGTCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDMRESGGMAST*TLSIFCPVVPS Trigger: ACTGGGGACCACAGGGCAGAAAATGGAGAGAGTCAAGGTTGATGCCATGCCTCCTGACTCCCTCATGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CAA 72 bp | CACTGGGATGCAGGCTCTGATTGGATCAGAGAGCGGTaGCTTGGAAACAGCATCATGGGATGCCACCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HWDAGSDWIRER*LGNSIMGCHPR Trigger: TCTGGGGTGGCATCCCATGATGCTGTTTCCAAGCAACCGCTCTCTGATCCAATCAGAGCCTGCATCCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAACAGGAGGCATCTCTGGTGCAGGGTGGTATGAAAATGTGGACTCCAGTTTGGACCGATTCAAAGTaGCCAGTGCCACCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQQEASLVQGGMKMWTPVWTDSK*PVPPFQ Trigger: CTGGAAGGGTGGCACTGGCCACTTTGAATCGGTCCA...AACTGGAGTCCACATTTTCATACCACCCTGCACCAGAGATGCCTCCTGTTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | GAGCTAAAGCGACTTCTGCCACCATGGTTTTGGCCAATCTGTGCTAGATGGGGGGGTACAATCCTCTTCTaGTGGGTGCCGGACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELKRLLPPWFWPICARWGGTILF*WVPDLL Trigger: CAGAAGGTCCGGCACCCACCAGAAGAGGATTGTACC...CCCCCATCTAGCACAGATTGGCCAAAACCATGGTGGCAGAAGTCGCTTTAGCTC 54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | ACTCCATGGGGACAGAAGGAGGTTGGCCCTCATCCCGTGTCTGGTTCGTTTTGGCGTTATCCAGGTAATTaGCATCTGGGTAGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPWGQKEVGPHPVSGSFWRYPGN*HLGSHG Trigger: GCCATGGCTACCCAGATGCCAATTACCTGGATAACG...CCAAAACGAACCAGACACGGGATGAGGGCCAACCTCCTTCTGTCCCCATGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR TCA 90 bp | GCCCAACAGGAGGCATCTCTGGTGCAGGGTGGTATGAAAATGTGGACTCCAGTTGCTGGGTGCCTGTCTTaGCGCCATAAATGGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: AQQEASLVQGGMKMWTPVAGCLS*RHKWSY Trigger: GTAAGACCATTTATGGCGTCAAGACAGGCACCCAGC...AACTGGAGTCCACATTTTCATACCACCCTGCACCAGAGATGCCTCCTGTTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | TGTCCATTAGGGTCCAAGTTTATTACGAGATGGGCTGGCAAAGGTGAGAAAAGTGTGGTGACTCACGGCTaGGCTGTAGGGACGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CPLGSKFITRWAGKGEKSVVTHG*AVGTPA Trigger: CGCTGGCGTCCCTACAGCCCAGCCGTGAGTCACCAC...ACTTTTCTCACCTTTGCCAGCCCATCTCGTAATAAACTTGGACCCTAATGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | AAAAGGACAGGGGAATGGAAGCACAAAGGCACAGACAACCACAGATATACCACAATCAGCACCCGGGACTaGGCAATGGCCAGTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRTGEWKHKGTDNHRYTTISTRD*AMASRC Trigger: GCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGAT...TGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGCTTCCATTCCCCTGTCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | GAGGGAGTCAGGAGGCATGGCATCAACCTTGACTCTCTCCATTTTCTGCCCTGTTGGCTTGCTTTTTGGTaGTCTTGCGGCTCGTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: EGVRRHGINLDSLHFLPCWLAFW*SCGSCS Trigger: CGAACACGAGCCGCAAGACCACCAAAAAGCAAGCCA...ACAGGGCAGAAAATGGAGAGAGTCAAGGTTGATGCCATGCCTCCTGACTCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | GTAGAACAGTCACTCCCTGAGATGTCCTTCTGGGCTCTTCCTTCTGCCTCATGCGTATTCCATCTTCCCTaGAGGCTGGGTGCCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VEQSLPEMSFWALPSASCVFHLP*RLGACL Trigger: AAGACAGGCACCCAGCCTCCAGGGAAGATGGAATAC...GCATGAGGCAGAAGGAAGAGCCCAGAAGGACATCTCAGGGAGTGACTGTTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR TCA 90 bp | TGTCCATTAGGGTCCAAGTTTATTACGAGATGGGCTGGCAAAGGTGAGAAAAGTTCGCCGGTCCAGGACTaGCTGGCCAGGACTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPLGSKFITRWAGKGEKSSPVQD*LARTES Trigger: AGACTCAGTCCTGGCCAGTCAGTCCTGGACCGGCGA...ACTTTTCTCACCTTTGCCAGCCCATCTCGTAATAAACTTGGACCCTAATGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR GCA 90 bp | CACATTGTTGAGATTGCCAAGCTTCCATCAGACCAGAAAGCTGAAAGAGTGAAACTGCTGGAGGCCCAGTaGCCCCATGGACCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HIVEIAKLPSDQKAERVKLLEAQ*PHGPQQ Trigger: CTGCTGTGGTCCATGGGGGCACTGGGCCTCCAGCAG...TTTCACTCTTTCAGCTTTCTGGTCTGATGGAAGCTTGGCAATCTCAACAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR GCA 90 bp | GTAGAACAGTCACTCCCTGAGATGTCCTTCTGGGCTCTTCCTTCTGCCTCATGCAGTCGCCCCAGCTGGTaGATTAGAGACTTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VEQSLPEMSFWALPSASCSRPSW*IRDLSS Trigger: AGAAGACAAGTCTCTAATGCACCAGCTGGGGCGACT...GCATGAGGCAGAAGGAAGAGCCCAGAAGGACATCTCAGGGAGTGACTGTTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | AAAAGGACAGGGGAATGGAAGCACAAAGGCACAGACAACCACAGATATACCACACCTGTTGCTTCCTTGTaGGCTGGCAGGGGAGCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KRTGEWKHKGTDNHRYTTPVASL*AGRGAY Trigger: GTAGGCTCCCCTGCCAGCCCACAAGGAAGCAACAGG...TGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGCTTCCATTCCCCTGTCCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | CTGATTGGATCAGAGAGCGGTTGCTTGGAAACAGCATCATGGGATGCCACCCCATCTTGGCTTGCTTTTTaGTGGTCTTGCGGCTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LIGSESGCLETASWDATPSWLAF*WSCGSC Trigger: ACACGAGCCGCAAGACCACCAAAAAGCAAGCCAAGA...TGGGGTGGCATCCCATGATGCTGTTTCCAAGCAACCGCTCTCTGATCCAATCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR GCA 90 bp | GTGTGGGCTCCAACTCACAGTGACTTGATGAAACTGAGCTGGTTTGCAATGAGTGCTTTTTGGTGGTCTTaGGGCTCGTGTTCGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: VWAPTHSDLMKLSWFAMSAFWWS*GSCSRP Trigger: GGGTCTCGAACACGAGCCGCAAGACCACCAAAAAGC...ACTCATTGCAAACCAGCTCAGTTTCATCAAGTCACTGTGAGTTGGAGCCCACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | AAAAGGACAGGGGAATGGAAGCACAAAGGCACAGACAACCACAGATATACCACAAGGGTCCCCGTGTCTTaGCGGAACTGGTTCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KRTGEWKHKGTDNHRYTTRVPVS*RNWFMD Trigger: GTCCATGAACCAGTTCCGCCAAGACACGGGGACCCT...TGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGCTTCCATTCCCCTGTCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR TCA 90 bp | TTCCTTACACTGCACCAAGGCATCCAATTTCTGATGTCACAGCAGTCTACACCTGAACCTCATTCCAGATaGCAGTATCGGACTCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FLTLHQGIQFLMSQQSTPEPHSR*QYRTRP Trigger: CGGGCGAGTCCGATACTGTCATCTGGAATGAGGTTC...AGGTGTAGACTGCTGTGACATCAGAAATTGGATGCCTTGGTGCAGTGTAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | CACATTGTTGAGATTGCCAAGCTTCCATCAGACCAGAAAGCTGAAAGAGTGAAAGAGGACCAGCTTTGGTaGGCGAGTGAGGCACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HIVEIAKLPSDQKAERVKEDQLW*ASEAHR Trigger: CCTGTGTGCCTCACTCGCCCACCAAAGCTGGTCCTC...TTTCACTCTTTCAGCTTTCTGGTCTGATGGAAGCTTGGCAATCTCAACAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CAA 72 bp | GGGCTTCTCTGGGGAAGCACTCTGGGTCAAAGTCGCTaGTGTCCAGGGCCTAATCTCATTGAAATGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLWGSTLGQSR*CPGPNLIEMNS Trigger: AGAATTCATTTCAATGAGATTAGGCCCTGGACACAAGCGACTTTGACCCAGAGTGCTTCCCCAGAGAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR TCA 90 bp | AAAAGGACAGGGGAATGGAAGCACAAAGGCACAGACAACCACAGATATACCACATCCCTTACCAGGGGCTaGGGATGGGTCATAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRTGEWKHKGTDNHRYTTSLTRG*GWVIVV Trigger: AACTACTATGACCCATCCTCAGCCCCTGGTAAGGGA...TGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGCTTCCATTCCCCTGTCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | CCTCTCAGAGCATCCTCGGGGAATAAGGAAATGAGACATAGACATTTTAAAGTCCGGTCCAGGACTGACTaGCCAGGACTGAGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLRASSGNKEMRHRHFKVRSRTD*PGLSLW Trigger: CCAAAGACTCAGTCCTGGCCAGTCAGTCCTGGACCG...GACTTTAAAATGTCTATGTCTCATTTCCTTATTCCCCGAGGATGCTCTGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | AAAAGGACAGGGGAATGGAAGCACAAAGGCACAGACAACCACAGATATACCACACTCGAATGGTGCCAGTaGTGTCTAGTGGCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRTGEWKHKGTDNHRYTTLEWCQ*CLVALL Trigger: GAGCAAAGCCACTAGACACCACTGGCACCATTCGAG...TGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGCTTCCATTCCCCTGTCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | GCACAAAGGCACAGACAACCACAGATATACCACATAGCTTTTCAAGGGATAAGCACTCGCCCGTGGTGCTaGAGGTTCCAATGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQRHRQPQIYHIAFQGISTRPWC*RFQWQR Trigger: TCTTTGCCATTGGAACCTCCAGCACCACGGGCGAGT...GCTTATCCCTTGAAAAGCTATGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CAA 72 bp | GGTACCAGCTACTGCTTGACCCACACATTGTTGAGATaGCCAAGCTTCCATCAGACCAGAAAGCTGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTSYCLTHTLLR*PSFHQTRKLKE Trigger: CTCTTTCAGCTTTCTGGTCTGATGGAAGCTTGGCAATCTCAACAATGTGTGGGTCAAGCAGTAGCTGGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR TCA 90 bp | AACTTCAAATCACAGCAGTTACTAACAGAACACCTGACATCTGGACATTCACCATTATCTCACTCTTGCTaGCAGGGGGCGGGTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NFKSQQLLTEHLTSGHSPLSHSC*QGAGGG Trigger: TCCTCCACCCGCCCCCTGTCAGCAAGAGTGAGATAA...TGGTGAATGTCCAGATGTCAGGTGTTCTGTTAGTAACTGCTGTGATTTGAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR TCA 90 bp | CTGGGCTCTTCCTTCTGCCTCATGCTATGCTTTTCCTGCGTCTACCTCCTTTGCAATTCTGTTTTGTGGTaGACCTCATTCCAGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGSSFCLMLCFSCVYLLCNSVLW*TSFQMT Trigger: TGTCATCTGGAATGAGGTTCACCACAAAACAGAATT...GCAAAGGAGGTAGACGCAGGAAAAGCATAGCATGAGGCAGAAGGAAGAGCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR GCA 90 bp | GCACAAAGGCACAGACAACCACAGATATACCACATAGCTTTTCAAGGGATAAGCTTCCAGTCTTCCTGTTaGTTCCTTGTGGGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQRHRQPQIYHIAFQGISFQSSC*FLVGWQ Trigger: CTGCCAGCCCACAAGGAAGCAACAGGAAGACTGGAA...GCTTATCCCTTGAAAAGCTATGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR GCA 90 bp | TTCCTTACACTGCACCAAGGCATCCAATTTCTGATGTCACAGCAGTCTACACCTATTCAAAGTGGCCAGTaGCACCCTTCCAGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLTLHQGIQFLMSQQSTPIQSGQ*HPSSLP Trigger: AGGAAGACTGGAAGGGTGGCACTGGCCACTTTGAAT...AGGTGTAGACTGCTGTGACATCAGAAATTGGATGCCTTGGTGCAGTGTAAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTTACACTGCACCAAGGCATCCAATTTCTGATGTCACAGCAGTCTACACCTGCAATGGCCAGTCGCTaGAGATTGGACCGATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLTLHQGIQFLMSQQSTPAMASR*RLDRFK Trigger: TTTGAATCGGTCCAATCTGCAGCGACTGGCCATTGC...AGGTGTAGACTGCTGTGACATCAGAAATTGGATGCCTTGGTGCAGTGTAAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAAATCACAGCAGTTACTAACAGAACACCTGACATCTGGACATTCACCAGCGGGTGCCGGACCTTCTaGAGGTACTTCTTTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LQITAVTNRTPDIWTFTSGCRTF*RYFFST Trigger: AGTGCTAAAGAAGTACCTGCAGAAGGTCCGGCACCC...GCTGGTGAATGTCCAGATGTCAGGTGTTCTGTTAGTAACTGCTGTGATTTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR TCA 90 bp | GCACAAAGGCACAGACAACCACAGATATACCACATAGCTTTTCAAGGGATAAGCAGGCATACTGGATGGTaGTGCCGACTTCCATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQRHRQPQIYHIAFQGISRHTGW*CRLPCH Trigger: ATGACATGGAAGTCGGCATCACCATCCAGTATGCCT...GCTTATCCCTTGAAAAGCTATGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCATTAGGGTCCAAGTTTATTACGAGATGGGCTGGCAAAGGTGAGAAAAGTTGTCTTCTGATAACCTaGGATGGGGCTGTCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CPLGSKFITRWAGKGEKSCLLIT*DGAVFP Trigger: AGGGAAGACAGCCCCATCGCAGGTTATCAGAAGACA...ACTTTTCTCACCTTTGCCAGCCCATCTCGTAATAAACTTGGACCCTAATGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGCTCCAACTCACAGTGACTTGATGAAACTGAGCTGGTTTGCAATGAGTCCTTTTCATGGGAAGTaGTGTCTTCAGAGATACCCT | + |
|
Preference number: 4 (lower is better) Translates to: VWAPTHSDLMKLSWFAMSPFHGK*CLQRYP Trigger: AGGGTATCTCTGAAGACAGCACTTCCCATGAAAAGG...ACTCATTGCAAACCAGCTCAGTTTCATCAAGTCACTGTGAGTTGGAGCCCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR CCA 90 bp | CTTAACATGAACTGCTTCCTTACACTGCACCAAGGCATCCAATTTCTGATGTCAGTCTGCCTGTTGATCTaGCCCATGGTGCTGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNMNCFLTLHQGIQFLMSVCLLI*PMVLKS Trigger: AGACTTCAGCACCATGGGCCAGATCAACAGGCAGAC...TGACATCAGAAATTGGATGCCTTGGTGCAGTGTAAGGAAGCAGTTCATGTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR CCA 90 bp | AACTTCAAATCACAGCAGTTACTAACAGAACACCTGACATCTGGACATTCACCATCTTCAGAGATACCCTaGGCAGCCAGTTCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NFKSQQLLTEHLTSGHSPSSEIP*AASSAS Trigger: GCTGGCTGAACTGGCTGCCCAGGGTATCTCTGAAGA...TGGTGAATGTCCAGATGTCAGGTGTTCTGTTAGTAACTGCTGTGATTTGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| 3UTR CAA 72 bp | CCAGGGCCTAATCTCATTGAAATGAATTCTGTATATTaGGGGGTTGGCACAAGAGAAGGAGTAAGGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGPNLIEMNSVY*GVGTREGVRYQ Trigger: CTGGTACCTTACTCCTTCTCTTGTGCCAACCCCCAAATATACAGAATTCATTTCAATGAGATTAGGCCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCATTAGGGTCCAAGTTTATTACGAGATGGGCTGGCAAAGGTGAGAAAAGTGGGTTTTACCTTTCTTaGCTTGCTTTTTGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPLGSKFITRWAGKGEKSGFYLS*LAFWWS Trigger: AGACCACCAAAAAGCAAGCCAAGAAAGGTAAAACCC...ACTTTTCTCACCTTTGCCAGCCCATCTCGTAATAAACTTGGACCCTAATGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CCA 90 bp | GTCAATCTAGCTCTTGAATCAAGACATCTTCCCAAGTACAATTCTATGTCCATTCAGGTAATTGGCATCTaGGTAGCCATGGCCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VNLALESRHLPKYNSMSIQVIGI*VAMASE Trigger: CTCACTGGCCATGGCTACCCAGATGCCAATTACCTG...AATGGACATAGAATTGTACTTGGGAAGATGTCTTGATTCAAGAGCTAGATTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| 3UTR CAA 72 bp | TCTGGTCTTGAATTAGCAAATCTGTGGGGAGATGAATaGAGCTCTTATATAAAGAAGACTGGATGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGLELANLWGDE*SSYIKKTGWKL Trigger: CAGCTTCCATCCAGTCTTCTTTATATAAGAGCTCAATTCATCTCCCCACAGATTTGCTAATTCAAGACCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 90 bp | GCGGGGACCAGCGCGCACCACCGCCTCGATGTGGTGACTCACGGCTaGGCTGTAGGGACGCCAGCGGCCGTGTTCGTTCAGCCATTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGTSAHHRLDVVTHG*AVGTPAAVFVQPFP Trigger: TGGGAATGGCTGAACGAACACGGCCGCTGGCGTCCCTACAGCCCAGCCGTGAGTCACCACATCGAGGCGGTGGTGCGCGCTGGTCCCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 90 bp | GGAGCAAGGTGGTGCAGGGGAGGACGTCGCCGGTCCAGGACTGACTaGCCAGGACTGAGTCTTTGGCATAGTGCCCGTGACCATGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GARWCRGGRRRSRTD*PGLSLWHSARDHGV Trigger: TACCCCATGGTCACGGGCACTATGCCAAAGACTCAGTCCTGGCCAGTCAGTCCTGGACCGGCGACGTCCTCCCCTGCACCACCTTGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS GCA 90 bp | TGGTGTCTAGTGGCTTTGCTCCAGGGCCAGGTGGCTGGGGCAGCTTaGCCACTCCAGAGAGGGCCATGTTCTTTCGTACTGCTGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WCLVALLQGQVAGAA*PLQRGPCSFVLLEA Trigger: GGCCTCCAGCAGTACGAAAGAACATGGCCCTCTCTGGAGTGGGCAAGCTGCCCCAGCCACCTGGCCCTGGAGCAAAGCCACTAGACACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS GCA 90 bp | ACCCCGGAGGCAATCAGCACCCGGGACTGGGCAATGGCCAGTCGCTaGAGATTGGACCGATTCAAAGTGGCCAGTGCCACCCTTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TPEAISTRDWAMASR*RLDRFKVASATLPV Trigger: GACTGGAAGGGTGGCACTGGCCACTTTGAATCGGTCCAATCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATTGCCTCCGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 90 bp | CCCATGGACCACAGCAGCCTTGACGCTCATCACCAAAACACACTGTaGACAGGAGCAAGGTGGTGCAGGGGAGGACGTCGCCGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PMDHSSLDAHHQNTL*TGARWCRGGRRRSR Trigger: CCTGGACCGGCGACGTCCTCCCCTGCACCACCTTGCTCCTGTCCACAGTGTGTTTTGGTGATGAGCGTCAAGGCTGCTGTGGTCCATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 90 bp | GGGCAGCTTGCCCACTCCAGAGAGGGCCATGTTCTTTCGTACTGCTaGAGGCCCAGTGCCCCCATGGACCACAGCAGCCTTGACGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GQLAHSREGHVLSYC*RPSAPMDHSSLDAH Trigger: ATGAGCGTCAAGGCTGCTGTGGTCCATGGGGGCACTGGGCCTCCAGCAGTACGAAAGAACATGGCCCTCTCTGGAGTGGGCAAGCTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 90 bp | GCACAGTGGGAACCCCGGAGGCAATCAGCACCCGGGACTGGGCAATaGCCAGTCGCTGCAGATTGGACCGATTCAAAGTGGCCAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AQWEPRRQSAPGTGQ*PVAADWTDSKWPVP Trigger: TGGCACTGGCCACTTTGAATCGGTCCAATCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATTGCCTCCGGGGTTCCCACTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS GCA 90 bp | TGGACCGATTCAAAGTGGCCAGTGCCACCCTTCCAGTCTTCCTGTTaGTTCCTTGTGGGCTGGCAGGGGAGCCTACAGTCGCCCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WTDSKWPVPPFQSSC*FLVGWQGSLQSPQL Trigger: CAGCTGGGGCGACTGTAGGCTCCCCTGCCAGCCCACAAGGAAGCAACAGGAAGACTGGAAGGGTGGCACTGGCCACTTTGAATCGGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 90 bp | TTCACAGGCACAGTGGGAACCCCGGAGGCAATCAGCACCCGGGACTaGGCAATGGCCAGTCGCTGCAGATTGGACCGATTCAAAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FTGTVGTPEAISTRD*AMASRCRLDRFKVA Trigger: GGCCACTTTGAATCGGTCCAATCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATTGCCTCCGGGGTTCCCACTGTGCCTGTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | CTGATTGGATCAGAGAGCGGTTGCTTGGAAACAGCATCATGGGATGCCACCCCAGGTGGCTGGGGCAGCTaGCCCACTCCAGAGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LIGSESGCLETASWDATPGGWGS*PTPERA Trigger: GGCCCTCTCTGGAGTGGGCAAGCTGCCCCAGCCACC...TGGGGTGGCATCCCATGATGCTGTTTCCAAGCAACCGCTCTCTGATCCAATCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 90 bp | ATGGTGCCAGTGGTGTCTAGTGGCTTTGCTCCAGGGCCAGGTGGCTaGGGCAGCTTGCCCACTCCAGAGAGGGCCATGTTCTTTCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: MVPVVSSGFAPGPGG*GSLPTPERAMFFRT Trigger: AGTACGAAAGAACATGGCCCTCTCTGGAGTGGGCAAGCTGCCCCAGCCACCTGGCCCTGGAGCAAAGCCACTAGACACCACTGGCACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 90 bp | CAAAGTGGCCAGTGCCACCCTTCCAGTCTTCCTGTTGCTTCCTTGTaGGCTGGCAGGGGAGCCTACAGTCGCCCCAGCTGGTGCATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSGQCHPSSLPVASL*AGRGAYSRPSWCIR Trigger: TCTAATGCACCAGCTGGGGCGACTGTAGGCTCCCCTGCCAGCCCACAAGGAAGCAACAGGAAGACTGGAAGGGTGGCACTGGCCACTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS GCA 90 bp | GGCAATGGCCAGTCGCTGCAGATTGGACCGATTCAAAGTGGCCAGTaGCACCCTTCCAGTCTTCCTGTTGCTTCCTTGTGGGCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GNGQSLQIGPIQSGQ*HPSSLPVASLWAGR Trigger: CCTGCCAGCCCACAAGGAAGCAACAGGAAGACTGGAAGGGTGGCACTGGCCACTTTGAATCGGTCCAATCTGCAGCGACTGGCCATTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 90 bp | GGGACTGGGCAATGGCCAGTCGCTGCAGATTGGACCGATTCAAAGTaGCCAGTGCCACCCTTCCAGTCTTCCTGTTGCTTCCTTGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTGQWPVAADWTDSK*PVPPFQSSCCFLVG Trigger: GCCCACAAGGAAGCAACAGGAAGACTGGAAGGGTGGCACTGGCCACTTTGAATCGGTCCAATCTGCAGCGACTGGCCATTGCCCAGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 90 bp | AGGCAATCAGCACCCGGGACTGGGCAATGGCCAGTCGCTGCAGATTaGACCGATTCAAAGTGGCCAGTGCCACCCTTCCAGTCTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RQSAPGTGQWPVAAD*TDSKWPVPPFQSSC Trigger: ACAGGAAGACTGGAAGGGTGGCACTGGCCACTTTGAATCGGTCCAATCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 90 bp | TATCTCACTCTTGCTGACAGGGGGCGGGTGGAGGACCAGCTTTGGTaGGCGAGTGAGGCACACAGGCAATCCCGCTGCACTCATGAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: YLTLADRGRVEDQLW*ASEAHRQSRCTHEY Trigger: ATACTCATGAGTGCAGCGGGATTGCCTGTGTGCCTCACTCGCCCACCAAAGCTGGTCCTCCACCCGCCCCCTGTCAGCAAGAGTGAGATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | ACTCCATGGGGACAGAAGGAGGTTGGCCCTCATCCCGTGTCTGGTTCGTTTTGGCGTTGGGTCTGCCTGTaGATCTGGCCCATGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPWGQKEVGPHPVSGSFWRWVCL*IWPMVL Trigger: CAGCACCATGGGCCAGATCAACAGGCAGACCCAACG...CCAAAACGAACCAGACACGGGATGAGGGCCAACCTCCTTCTGTCCCCATGGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS GCA 90 bp | GAGGACCAGCTTTGGTGGGCGAGTGAGGCACACAGGCAATCCCGCTaGACTCATGAGTATCCCGGTGATTCCTGCCAAGGCAGGATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: EDQLWWASEAHRQSR*THEYPGDSCQGRIN Trigger: GTTAATCCTGCCTTGGCAGGAATCACCGGGATACTCATGAGTGCAGCGGGATTGCCTGTGTGCCTCACTCGCCCACCAAAGCTGGTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 90 bp | GAGAGGGCCATGTTCTTTCGTACTGCTGGAGGCCCAGTGCCCCCATaGACCACAGCAGCCTTGACGCTCATCACCAAAACACACTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ERAMFFRTAGGPVPP*TTAALTLITKTHCG Trigger: TCCACAGTGTGTTTTGGTGATGAGCGTCAAGGCTGCTGTGGTCCATGGGGGCACTGGGCCTCCAGCAGTACGAAAGAACATGGCCCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 90 bp | ACACCTGGACAGCTTTCCCACCAGGTCAGGCTTGACTGTAGGCTGTaGGCCTTTGTAGCCAGAGGGGGCTGTGAGACGCTCCATACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TPGQLSHQVRLDCRL*AFVARGGCETLHTD Trigger: ATCTGTATGGAGCGTCTCACAGCCCCCTCTGGCTACAAAGGCCCACAGCCTACAGTCAAGCCTGACCTGGTGGGAAAGCTGTCCAGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | GAGCTAAAGCGACTTCTGCCACCATGGTTTTGGCCAATCTGTGCTAGATGGGGGCTTCCTGTTGCTTCCTaGTGGGCTGGCAGGGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ELKRLLPPWFWPICARWGLPVAS*WAGRGA Trigger: GGCTCCCCTGCCAGCCCACAAGGAAGCAACAGGAAG...CCCCCATCTAGCACAGATTGGCCAAAACCATGGTGGCAGAAGTCGCTTTAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | GAGCTAAAGCGACTTCTGCCACCATGGTTTTGGCCAATCTGTGCTAGATGGGGGCCCACCAGGTCAGGCTaGACTGTAGGCTGTGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ELKRLLPPWFWPICARWGPTRSG*TVGCGP Trigger: AGGCCCACAGCCTACAGTCAAGCCTGACCTGGTGGG...CCCCCATCTAGCACAGATTGGCCAAAACCATGGTGGCAGAAGTCGCTTTAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | CTGGGCTCTTCCTTCTGCCTCATGCTATGCTTTTCCTGCGTCTACCTCCTTTGCGCCAGTCGCTGCAGATaGGACCGATTCAAAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGSSFCLMLCFSCVYLLCASRCR*DRFKVA Trigger: GGCCACTTTGAATCGGTCCAATCTGCAGCGACTGGC...GCAAAGGAGGTAGACGCAGGAAAAGCATAGCATGAGGCAGAAGGAAGAGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | GAGGGAGTCAGGAGGCATGGCATCAACCTTGACTCTCTCCATTTTCTGCCCTGTCTTCCAGTCTTCCTGTaGCTTCCTTGTGGGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EGVRRHGINLDSLHFLPCLPVFL*LPCGLA Trigger: TGCCAGCCCACAAGGAAGCAACAGGAAGACTGGAAG...ACAGGGCAGAAAATGGAGAGAGTCAAGGTTGATGCCATGCCTCCTGACTCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | GTAGAACAGTCACTCCCTGAGATGTCCTTCTGGGCTCTTCCTTCTGCCTCATGCTGCTTTTTGGTGGTCTaGCGGCTCGTGTTCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VEQSLPEMSFWALPSASCCFLVV*RLVFET Trigger: GGTCTCGAACACGAGCCGCAAGACCACCAAAAAGCA...GCATGAGGCAGAAGGAAGAGCCCAGAAGGACATCTCAGGGAGTGACTGTTCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | GAGCTAAAGCGACTTCTGCCACCATGGTTTTGGCCAATCTGTGCTAGATGGGGGTGGACCACAGCAGCCTaGACGCTCATCACCAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: ELKRLLPPWFWPICARWGWTTAA*TLITKT Trigger: TGTTTTGGTGATGAGCGTCAAGGCTGCTGTGGTCCA...CCCCCATCTAGCACAGATTGGCCAAAACCATGGTGGCAGAAGTCGCTTTAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | GCATTTGACTCTGACCCTCTTAACATGAACTGCTTCCTTACACTGCACCAAGGCATGATCCGGATGGTCTaGCAGTCCGGATGGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AFDSDPLNMNCFLTLHQGMIRMV*QSGWPG Trigger: GCCTGGCCATCCGGACTGCAAGACCATCCGGATCAT...GCCTTGGTGCAGTGTAAGGAAGCAGTTCATGTTAAGAGGGTCAGAGTCAAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | ACTCCATGGGGACAGAAGGAGGTTGGCCCTCATCCCGTGTCTGGTTCGTTTTGGTTTACCTTTCTTGGCTaGCTTTTTGGTGGTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: TPWGQKEVGPHPVSGSFWFTFLG*LFGGLA Trigger: CGCAAGACCACCAAAAAGCAAGCCAAGAAAGGTAAA...CCAAAACGAACCAGACACGGGATGAGGGCCAACCTCCTTCTGTCCCCATGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | GAGGGAGTCAGGAGGCATGGCATCAACCTTGACTCTCTCCATTTTCTGCCCTGTTCCTTGTTCCCATTGTaGTACATAGCCACCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGVRRHGINLDSLHFLPCSLFPL*YIATRQ Trigger: CTGCCTGGTGGCTATGTACAACAATGGGAACAAGGA...ACAGGGCAGAAAATGGAGAGAGTCAAGGTTGATGCCATGCCTCCTGACTCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | TGTCCATTAGGGTCCAAGTTTATTACGAGATGGGCTGGCAAAGGTGAGAAAAGTGAGGGTCCCCGTGTCTaGGCGGAACTGGTTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: CPLGSKFITRWAGKGEKSEGPRV*AELVHG Trigger: TCCATGAACCAGTTCCGCCAAGACACGGGGACCCTC...ACTTTTCTCACCTTTGCCAGCCCATCTCGTAATAAACTTGGACCCTAATGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | ACTCCATGGGGACAGAAGGAGGTTGGCCCTCATCCCGTGTCTGGTTCGTTTTGGAAATGGTCTTACATGTaGGGCACTGTAAACTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TPWGQKEVGPHPVSGSFWKWSYM*GTVNSH Trigger: ATGGGAGTTTACAGTGCCCAACATGTAAGACCATTT...CCAAAACGAACCAGACACGGGATGAGGGCCAACCTCCTTCTGTCCCCATGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | GCACAAAGGCACAGACAACCACAGATATACCACATAGCTTTTCAAGGGATAAGCTTCTTGGCTTGCTTTTaGGTGGTCTTGCGGCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: AQRHRQPQIYHIAFQGISFLACF*VVLRLV Trigger: CACGAGCCGCAAGACCACCAAAAAGCAAGCCAAGAA...GCTTATCCCTTGAAAAGCTATGTGGTATATCTGTGGTTGTCTGTGCCTTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | GCCCAACAGGAGGCATCTCTGGTGCAGGGTGGTATGAAAATGTGGACTCCAGTTTGTAAACTCCCATCCTaGTTCCCATTGTTGTACATA | + |
|
Preference number: 5 (lower is better) Translates to: AQQEASLVQGGMKMWTPVCKLPS*FPLLYI Trigger: TATGTACAACAATGGGAACAAGGATGGGAGTTTACA...AACTGGAGTCCACATTTTCATACCACCCTGCACCAGAGATGCCTCCTGTTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | CCTCTCAGAGCATCCTCGGGGAATAAGGAAATGAGACATAGACATTTTAAAGTCGGAGTCCAGGAACCATaGTCATTCTCCCATTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLRASSGNKEMRHRHFKVGVQEP*SFSHSH Trigger: GTGGGAATGGGAGAATGACAATGGTTCCTGGACTCC...GACTTTAAAATGTCTATGTCTCATTTCCTTATTCCCCGAGGATGCTCTGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS-3UTR CAA 90 bp | CACATTGTTGAGATTGCCAAGCTTCCATCAGACCAGAAAGCTGAAAGAGTGAAACCATCCTTGTTCCCATaGTTGTACATAGCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HIVEIAKLPSDQKAERVKPSLFP*LYIATR Trigger: CCTGGTGGCTATGTACAACAATGGGAACAAGGATGG...TTTCACTCTTTCAGCTTTCTGGTCTGATGGAAGCTTGGCAATCTCAACAATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS GCA 72 bp | GCGCGAGCCGGCTGTCCACCTGGCCCAACACCACGCTaGCCCCGGCGCGGGGACCAGCGCGCACCACCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ARAGCPPGPTPR*PRRGDQRAPPP Trigger: AGGCGGTGGTGCGCGCTGGTCCCCGCGCCGGGGGCAGCGTGGTGTTGGGCCAGGTGGACAGCCGGCTCGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 72 bp | CTTGCTGACAGGGGGCGGGTGGAGGACCAGCTTTGGTaGGCGAGTGAGGCACACAGGCAATCCCGCTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: LADRGRVEDQLW*ASEAHRQSRCT Trigger: AGTGCAGCGGGATTGCCTGTGTGCCTCACTCGCCCACCAAAGCTGGTCCTCCACCCGCCCCCTGTCAGCAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 72 bp | TGGTGCAGGGGAGGACGTCGCCGGTCCAGGACTGACTaGCCAGGACTGAGTCTTTGGCATAGTGCCCGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: WCRGGRRRSRTD*PGLSLWHSARD Trigger: GTCACGGGCACTATGCCAAAGACTCAGTCCTGGCCAGTCAGTCCTGGACCGGCGACGTCCTCCCCTGCACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 72 bp | GCACCCGGGACTGGGCAATGGCCAGTCGCTGCAGATTaGACCGATTCAAAGTGGCCAGTGCCACCCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: APGTGQWPVAAD*TDSKWPVPPFQ Trigger: CTGGAAGGGTGGCACTGGCCACTTTGAATCGGTCCAATCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS CCA 72 bp | ACAGTGGGAACCCCGGAGGCAATCAGCACCCGGGACTaGGCAATGGCCAGTCGCTGCAGATTGGACCGATTC | + |
|
Preference number: 6 (lower is better) Translates to: TVGTPEAISTRD*AMASRCRLDRF Trigger: GAATCGGTCCAATCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATTGCCTCCGGGGTTCCCACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS GCA 72 bp | GCAATCAGCACCCGGGACTGGGCAATGGCCAGTCGCTaGAGATTGGACCGATTCAAAGTGGCCAGTGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: AISTRDWAMASR*RLDRFKVASAT Trigger: GGTGGCACTGGCCACTTTGAATCGGTCCAATCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS CCA 72 bp | CGCCGGTCCAGGACTGACTGGCCAGGACTGAGTCTTTaGCATAGTGCCCGTGACCATGGGGTAGATGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RRSRTDWPGLSL*HSARDHGVDEV Trigger: GACCTCATCTACCCCATGGTCACGGGCACTATGCCAAAGACTCAGTCCTGGCCAGTCAGTCCTGGACCGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS CCA 72 bp | GAACCCCGGAGGCAATCAGCACCCGGGACTGGGCAATaGCCAGTCGCTGCAGATTGGACCGATTCAAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: EPRRQSAPGTGQ*PVAADWTDSKW Trigger: CCACTTTGAATCGGTCCAATCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATTGCCTCCGGGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS CAA 72 bp | AGCACCCGGGACTGGGCAATGGCCAGTCGCTGCAGATaGGACCGATTCAAAGTGGCCAGTGCCACCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: STRDWAMASRCR*DRFKVASATLP Trigger: TGGAAGGGTGGCACTGGCCACTTTGAATCGGTCCAATCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
||
| CDS CAA 90 bp | GAGGCAATCAGCACCCGGGACTGGGCAATGGCCAGTCGCTGCAGATaGGACCGATTCAAAGTGGCCAGTGCCACCCTTCCAGTCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: EAISTRDWAMASRCR*DRFKVASATLPVFL Trigger: CAGGAAGACTGGAAGGGTGGCACTGGCCACTTTGAATCGGTCCAATCTGCAGCGACTGGCCATTGCCCAGTCCCGGGTGCTGATTGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS GCA 72 bp | TCAAAGTGGCCAGTGCCACCCTTCCAGTCTTCCTGTTaGTTCCTTGTGGGCTGGCAGGGGAGCCTACAGTCG | + |
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Preference number: 6 (lower is better) Translates to: SKWPVPPFQSSC*FLVGWQGSLQS Trigger: CGACTGTAGGCTCCCCTGCCAGCCCACAAGGAAGCAACAGGAAGACTGGAAGGGTGGCACTGGCCACTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 72 bp | ATGAGGTCTAGTCGTCGTCTGACACGGCGCTGGCGTTaGGTCTGCCTGTTGATCTGGCCCATGGTGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: MRSSRRLTRRWR*VCLLIWPMVLK Trigger: CTTCAGCACCATGGGCCAGATCAACAGGCAGACCCAACGCCAGCGCCGTGTCAGACGACGACTAGACCTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 72 bp | CACAGCAGCCTTGACGCTCATCACCAAAACACACTGTaGACAGGAGCAAGGTGGTGCAGGGGAGGACGTCGC | + |
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Preference number: 6 (lower is better) Translates to: HSSLDAHHQNTL*TGARWCRGGRR Trigger: GCGACGTCCTCCCCTGCACCACCTTGCTCCTGTCCACAGTGTGTTTTGGTGATGAGCGTCAAGGCTGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CAA 90 bp | ATTCAAAGTGGCCAGTGCCACCCTTCCAGTCTTCCTGTTGCTTCCTaGTGGGCTGGCAGGGGAGCCTACAGTCGCCCCAGCTGGTGCATT | + |
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Preference number: 6 (lower is better) Translates to: IQSGQCHPSSLPVAS*WAGRGAYSRPSWCI Trigger: AATGCACCAGCTGGGGCGACTGTAGGCTCCCCTGCCAGCCCACAAGGAAGCAACAGGAAGACTGGAAGGGTGGCACTGGCCACTTTGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS GCA 72 bp | TGGGCTGGCAGGGGAGCCTACAGTCGCCCCAGCTGGTaGATTAGAGACTTGTCTTCTGATAACCTGCGATGG | + |
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Preference number: 6 (lower is better) Translates to: WAGRGAYSRPSW*IRDLSSDNLRW Trigger: CCATCGCAGGTTATCAGAAGACAAGTCTCTAATGCACCAGCTGGGGCGACTGTAGGCTCCCCTGCCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS GCA 72 bp | TCTAGTCGTCGTCTGACACGGCGCTGGCGTTGGGTCTaGCTGTTGATCTGGCCCATGGTGCTGAAGTCTATT | + |
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Preference number: 6 (lower is better) Translates to: SSRRLTRRWRWV*LLIWPMVLKSI Trigger: AATAGACTTCAGCACCATGGGCCAGATCAACAGGCAGACCCAACGCCAGCGCCGTGTCAGACGACGACTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CAA 72 bp | GGAGCCTACAGTCGCCCCAGCTGGTGCATTAGAGACTaGTCTTCTGATAACCTGCGATGGGGCTGTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: GAYSRPSWCIRD*SSDNLRWGCLP Trigger: GGGAAGACAGCCCCATCGCAGGTTATCAGAAGACAAGTCTCTAATGCACCAGCTGGGGCGACTGTAGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 72 bp | CTTTTTGGTGGTCTTGCGGCTCGTGTTCGAGACCCCTaGGATGGACTTTATCTCACTCTTGCTGACAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: LFGGLAARVRDP*DGLYLTLADRG Trigger: CCCCCTGTCAGCAAGAGTGAGATAAAGTCCATCCCAGGGGTCTCGAACACGAGCCGCAAGACCACCAAAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS CCA 72 bp | TGGTGCATTAGAGACTTGTCTTCTGATAACCTGCGATaGGGCTGTCTTCCCTGGGCCTCGAATGGTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: WCIRDLSSDNLR*GCLPWASNGAS Trigger: ACTGGCACCATTCGAGGCCCAGGGAAGACAGCCCCATCGCAGGTTATCAGAAGACAAGTCTCTAATGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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| CDS GCA 72 bp | CGCTCCATACAGATGGTACAATCCTCTTCTGGTGGGTaGCGGACCTTCTGCAGGTACTTCTTTAGCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: RSIQMVQSSSGG*RTFCRYFFSTS Trigger: GGAAGTGCTAAAGAAGTACCTGCAGAAGGTCCGGCACCCACCAGAAGAGGATTGTACCATCTGTATGGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045521.9 |
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