Pregenerated sensors for DTX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040415Ensembl transcript IDs: ENSMUST00000038217.14, ENSMUST00000116229.2, ENSMUST00000130855.8, ENSMUST00000144322.8
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAGGCAGCTAATATCAGTCCAAGGTGAGACAGTATTCAGGGGCTaGAGTTCCAGAGACCCCATCCTTCCTACCCAGGTCCTTTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: GRQLISVQGETVFRG*SSRDPILPTQVLSQ Trigger: CTGAGAAAGGACCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCACCTTGGACTGATATTAGCTGCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| 3UTR CCA 90 bp | GATACCCTTGGCTCTCAGTTCCTCTTGCACCCTAGTCAGGTAGGTTaGGTCCGGATACCCAAACCTGGGGCAAAGAGAAATGAGGATCAG | + |
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Preference number: 1 (lower is better) Translates to: DTLGSQFLLHPSQVG*VRIPKPGAKRNEDQ Trigger: CTGATCCTCATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAACCTACCTGACTAGGGTGCAAGAGGAACTGAGAGCCAAGGGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| 3UTR CAA 90 bp | AGCTGTCCCTCAGTCGTCTGTGATACCCTTGGCTCTCAGTTCCTCTaGCACCCTAGTCAGGTAGGTTGGGTCCGGATACCCAAACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SCPSVVCDTLGSQFL*HPSQVGWVRIPKPG Trigger: CCCAGGTTTGGGTATCCGGACCCAACCTACCTGACTAGGGTGCAAGAGGAACTGAGAGCCAAGGGTATCACAGACGACTGAGGGACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| 3UTR-3UTR CCA 90 bp | AAATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAAGGGGACGGGAGCCTTaGAAAACAGCCTCTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: KYVHGVRGREPWKTASAGRGREP*KTASAG Trigger: TCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCT...TCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| 3UTR-3UTR CCA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCACAGTATTCAGGGGCTaGAGTTCCAGAGACCCCATC | + |
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Preference number: 2 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGTVFRG*SSRDPI Trigger: GATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGT...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCATGTCCTCTTCCCCTCTaGGTTCCCACCCCAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SFLPRSFLSLVTGARYIPCPLPL*VPTPVR Trigger: TCTGACTGGGGTGGGAACTCAGAGGGGAAGAGGACA...TGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGGGGACGGGAGCCTTaGAAAACAGCCTCTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SQLSHWSTVHTRKSQGHWRGREP*KTASAG Trigger: TCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCT...CCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGTCCTCTTCCCCTCTaGGTTCCCACCCCAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LSQLSHWSTVHTRKSQGHCPLPL*VPTPVR Trigger: TCTGACTGGGGTGGGAACTCAGAGGGGAAGAGGACA...GTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGACAGTATTCAGGGGCTaGAGTTCCAGAGACCCCATC | + |
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Preference number: 2 (lower is better) Translates to: LPTQVLSQLSHWSTVHTRTVFRG*SSRDPI Trigger: GATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGT...CCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGTCCTTTCTCAGCTGAGGGGACGGGAGCCTaGGAAAACAGCCTCTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: QGLEFQRPHPSYPGPFSAEGTGA*ENSLCW Trigger: CCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTC...AGCTGAGAAAGGACCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| 3UTR-3UTR CAA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCGAGCAGAGGCTTCCGTaGGATCCTAGTAGAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGEQRLP*DPSRGQ Trigger: CTGTCCTCTACTAGGATCCAACGGAAGCCTCTGCTC...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| 3UTR-3UTR CAA 90 bp | GTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGGAGCAGAGGCTTCCGTaGGATCCTAGTAGAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: VRQYSGAGVPETPSFLPREQRLP*DPSRGQ Trigger: CTGTCCTCTACTAGGATCCAACGGAAGCCTCTGCTC...CCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| 3UTR-3UTR CAA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCGGCTCTCAGTTCCTCTaGCACCCTAGTCAGGTAGGT | + |
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Preference number: 3 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGGSQFL*HPSQVG Trigger: ACCTACCTGACTAGGGTGCAAGAGGAACTGAGAGCC...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| 3UTR TCA 72 bp | AGCTGGCTGGGGGAGGCAGCTAATATCAGTCCAAGGTaGGACAGTATTCAGGGGCTGGAGTTCCAGAGACCC | + |
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Preference number: 3 (lower is better) Translates to: SWLGEAANISPR*DSIQGLEFQRP Trigger: GGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCACCTTGGACTGATATTAGCTGCCTCCCCCAGCCAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACGAGGGGACGGGAGCCTaGGAAAACAGCCTCTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: LSQLSHWSTVHTRKSQGHEGTGA*ENSLCW Trigger: CCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTC...GTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| 3UTR CCA 72 bp | GGCTCTCAGTTCCTCTTGCACCCTAGTCAGGTAGGTTaGGTCCGGATACCCAAACCTGGGGCAAAGAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GSQFLLHPSQVG*VRIPKPGAKRN Trigger: ATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAACCTACCTGACTAGGGTGCAAGAGGAACTGAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGAGCAGAGGCTTCCGTaGGATCCTAGTAGAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: SFLPRSFLSLVTGARYIPEQRLP*DPSRGQ Trigger: CTGTCCTCTACTAGGATCCAACGGAAGCCTCTGCTC...TGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| 3UTR-3UTR CAA 90 bp | AAATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGATCGTCTGTGATACCCTaGGCTCTCAGTTCCTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: KYVHGVRGREPWKTASAGSSVIP*ALSSSC Trigger: GCAAGAGGAACTGAGAGCCAAGGGTATCACAGACGA...TCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| 3UTR CCA 72 bp | ATCCTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTaGAGCACGGTACATACCAGGAAAAGCCAAGGACAC | + |
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Preference number: 3 (lower is better) Translates to: ILPTQVLSQLSH*STVHTRKSQGH Trigger: GTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | AGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCACTTGGCCAGTGGGGGGAGGAGTCGCACAGCTaGGGTCCCCCTGTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RGREPWKTASAGALGQWGEESHS*GPPVQL Trigger: CAGCTGCACAGGGGGACCCCAGCTGTGCGACTCCTC...CCCCCACTGGCCAAGTGCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCT 66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| CDS-3UTR CCA 90 bp | AGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCACTTGGCCAGTGGGGGAGCATCCGTCCGTTCTaGGGCTGGTTGCCCACAAGC | + |
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Preference number: 4 (lower is better) Translates to: RGREPWKTASAGALGQWGSIRPF*GWLPTS Trigger: GCTTGTGGGCAACCAGCCCCAGAACGGACGGATGCT...CCCCCACTGGCCAAGTGCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR GCA 90 bp | ATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCAGGATGGACACCCGATaGTCCTCCCGAAGCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: ICTRSEGTGALENSLCWSRMDTR*SSRSRA Trigger: GGCCCGGCTTCGGGAGGAGCATCGGGTGTCCATCCT...GCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR GCA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCGGGTCAGCACCTTGTTaGCCTCGGGGCAGTCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGGSAPC*PRGSPG Trigger: TCCCGGACTGCCCCGAGGGCAACAAGGTGCTGACCC...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | ATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCCCAGGTAGAGCCCATTaGGAGGGGCTGGGGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: ICTRSEGTGALENSLCWSPGRAH*EGLGED Trigger: GTCCTCCCCCAGCCCCTCCCAATGGGCTCTACCTGG...GCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR GCA 90 bp | GCTGTCCCTCAGTCGTCTGTGATACCCTTGGCTCTCAGTTCCTCTTGCACCCTAGGGTCAGCACCTTGTTaGCCTCGGGGCAGTCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: AVPQSSVIPLALSSSCTLGSAPC*PRGSPG Trigger: TCCCGGACTGCCCCGAGGGCAACAAGGTGCTGACCC...TAGGGTGCAAGAGGAACTGAGAGCCAAGGGTATCACAGACGACTGAGGGACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| CDS-3UTR GCA 90 bp | GTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGGCTGGGGTCCCCCTGTaGAGCTGGTCTTGTGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: VRQYSGAGVPETPSFLPRAGVPL*SWSCGG Trigger: TCCACCACAAGACCAGCTGCACAGGGGGACCCCAGC...CCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | CAGTTCCTCTTGCACCCTAGTCAGGTAGGTTGGGTCCGGATACCCAAACCTGGGTGGGGGAGGACCCTGTaGGGACAGCTGGAGCACGTA | + |
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Preference number: 4 (lower is better) Translates to: QFLLHPSQVGWVRIPKPGWGRTL*GQLEHV Trigger: TACGTGCTCCAGCTGTCCCCACAGGGTCCTCCCCCA...CCCAGGTTTGGGTATCCGGACCCAACCTACCTGACTAGGGTGCAAGAGGAACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| CDS-3UTR CCA 90 bp | CAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGTCCTTTCTCAGCTTGGGCAGCAGGAGGGTaGCATCCTTGGAGACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QGLEFQRPHPSYPGPFSAWAAGG*HPWRPA Trigger: TGCTGGTCTCCAAGGATGCCACCCTCCTGCTGCCCA...AGCTGAGAAAGGACCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | CAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGTCCTTTCTCAGCTAGGGTACCGAACTCCTaGGTTGGGGTGTTCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QGLEFQRPHPSYPGPFSARVPNS*VGVFSP Trigger: GGGGCTGAACACCCCAACCCAGGAGTTCGGTACCCT...AGCTGAGAAAGGACCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | AGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCACTTGGCCAGTGGGGGGTGCAGCTGGTCTTGTaGTGGATGTCGTTCCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: RGREPWKTASAGALGQWGVQLVL*WMSFQV Trigger: CACTTGGAACGACATCCACCACAAGACCAGCTGCAC...CCCCCACTGGCCAAGTGCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | CAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGTCCTTTCTCAGCTGGATACCCAAACAGCTaGGGTCCCCCTGTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: QGLEFQRPHPSYPGPFSAGYPNS*GPPVQL Trigger: CAGCTGCACAGGGGGACCCCAGCTGTTTGGGTATCC...AGCTGAGAAAGGACCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | ATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCAGCATCCGTCCGTTCTaGGGCTGGTTGCCCACAAGC | + |
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Preference number: 4 (lower is better) Translates to: ICTRSEGTGALENSLCWSSIRPF*GWLPTS Trigger: GCTTGTGGGCAACCAGCCCCAGAACGGACGGATGCT...GCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | GTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGAGCATCCGTCCGTTCTaGGGCTGGTTGCCCACAAGC | + |
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Preference number: 4 (lower is better) Translates to: VRQYSGAGVPETPSFLPRSIRPF*GWLPTS Trigger: GCTTGTGGGCAACCAGCCCCAGAACGGACGGATGCT...CCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | GTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGGGAGGGTGGCATCCTTaGAGACCAGCATCCGTCCGT | + |
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Preference number: 4 (lower is better) Translates to: VRQYSGAGVPETPSFLPRGGWHP*RPASVR Trigger: ACGGACGGATGCTGGTCTCCAAGGATGCCACCCTCC...CCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | GTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGTGGGCAGCAGGAGGGTaGCATCCTTGGAGACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VRQYSGAGVPETPSFLPRWAAGG*HPWRPA Trigger: TGCTGGTCTCCAAGGATGCCACCCTCCTGCTGCCCA...CCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | CTTGGCTCTCAGTTCCTCTTGCACCCTAGTCAGGTAGGTTGGGTCCGGATACCCTGGGCAGCAGGAGGGTaGCATCCTTGGAGACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LGSQFLLHPSQVGWVRIPWAAGG*HPWRPA Trigger: TGCTGGTCTCCAAGGATGCCACCCTCCTGCTGCCCA...GGGTATCCGGACCCAACCTACCTGACTAGGGTGCAAGAGGAACTGAGAGCCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| CDS-3UTR CCA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCACCGAACTCCTGGGTTaGGGTGTTCAGCCCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGTELLG*GVQPPG Trigger: TCCAGGGGGCTGAACACCCCAACCCAGGAGTTCGGT...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | ATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCGGTAGGCCACCCGTGTaGTACCAGGGTACCGAACTC | + |
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Preference number: 4 (lower is better) Translates to: ICTRSEGTGALENSLCWSGRPPV*YQGTEL Trigger: GAGTTCGGTACCCTGGTACCACACGGGTGGCCTACC...GCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | GTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGGGATACCCAAACAGCTaGGGTCCCCCTGTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VRQYSGAGVPETPSFLPRGYPNS*GPPVQL Trigger: CAGCTGCACAGGGGGACCCCAGCTGTTTGGGTATCC...CCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| CDS-3UTR GCA 90 bp | TCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGGATGGACACCCGATaGTCCTCCCGAAGCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SQLSHWSTVHTRKSQGHWRMDTR*SSRSRA Trigger: GGCCCGGCTTCGGGAGGAGCATCGGGTGTCCATCCT...CCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR GCA 90 bp | GTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGGGGCAGGTGGTTTCCTaGTCTTCAGCGTCCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VRQYSGAGVPETPSFLPRGQVVS*SSASSL Trigger: CAGAGAGGACGCTGAAGAGCAGGAAACCACCTGCCC...CCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| CDS-3UTR GCA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCGGGCAGGTGGTTTCCTaGTCTTCAGCGTCCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGGQVVS*SSASSL Trigger: CAGAGAGGACGCTGAAGAGCAGGAAACCACCTGCCC...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR GCA 90 bp | CAGTTCCTCTTGCACCCTAGTCAGGTAGGTTGGGTCCGGATACCCAAACCTGGGCAGGCCTTTTTCACCTaGAGGGCCCGTGTGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: QFLLHPSQVGWVRIPKPGQAFFT*RARVMQ Trigger: CTGCATCACACGGGCCCTGCAGGTGAAAAAGGCCTG...CCCAGGTTTGGGTATCCGGACCCAACCTACCTGACTAGGGTGCAAGAGGAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| CDS-3UTR GCA 90 bp | GCGGTGAGGAGGCTCCTTATAGGGGCAGAGAAGAGCGAGAGACAGACTGACAAACGTTCTGGGGCTGGTTaGCCACAAGCTGCCCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVRRLLIGAEKSERQTDKRSGAG*PQAARR Trigger: TCTACGGGCAGCTTGTGGGCAACCAGCCCCAGAACG...TTTGTCAGTCTGTCTCTCGCTCTTCTCTGCCCCTATAAGGAGCCTCCTCACCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCCCAGGTAGAGCCCATTaGGAGGGGCTGGGGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSHWSTVHTRKSQGHWRSPGRAH*EGLGED Trigger: GTCCTCCCCCAGCCCCTCCCAATGGGCTCTACCTGG...GCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | GCGGTGAGGAGGCTCCTTATAGGGGCAGAGAAGAGCGAGAGACAGACTGACAAAACCGAACTCCTGGGTTaGGGTGTTCAGCCCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVRRLLIGAEKSERQTDKTELLG*GVQPPG Trigger: TCCAGGGGGCTGAACACCCCAACCCAGGAGTTCGGT...TTTGTCAGTCTGTCTCTCGCTCTTCTCTGCCCCTATAAGGAGCCTCCTCACCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR TCA 90 bp | AAATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGACCATGGAGAGGGAGATaGGGAGGAGTCGCACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KYVHGVRGREPWKTASAGPWRGR*GGVAQL Trigger: CAGCTGTGCGACTCCTCCTCATCTCCCTCTCCATGG...TCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR TCA 90 bp | ATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCAGGATGAAAACAGACTaGGAGGGTGGATGGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ICTRSEGTGALENSLCWSRMKTD*EGGWLP Trigger: GGGGAGCCATCCACCCTCTCAGTCTGTTTTCATCCT...GCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR GCA 90 bp | GTCCAAGGTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTGGAGCCTCCACAGGCTaGCATTCTGGACAGGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: VQGETVFRGWSSRDPILPGASTG*HSGQDE Trigger: TTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCTCC...AGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCACCTTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038217.14 |
||
| CDS-3UTR GCA 90 bp | GCTGTCCCTCAGTCGTCTGTGATACCCTTGGCTCTCAGTTCCTCTTGCACCCTAGGGCAGGTGGTTTCCTaGTCTTCAGCGTCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVPQSSVIPLALSSSCTLGQVVS*SSASSL Trigger: CAGAGAGGACGCTGAAGAGCAGGAAACCACCTGCCC...TAGGGTGCAAGAGGAACTGAGAGCCAAGGGTATCACAGACGACTGAGGGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR GCA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCGAGGCGCTGGTCAAATaGCTTTCGGAACAGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGEALVK*LSEQGQ Trigger: CTGACCCTGTTCCGAAAGGCATTTGACCAGCGCCTC...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGGCTGGGGTCCCCCTGTaGAGCTGGTCTTGTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQLSHWSTVHTRKSQGHWAGVPL*SWSCGG Trigger: TCCACCACAAGACCAGCTGCACAGGGGGACCCCAGC...CCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGTGGGGGAGGACCCTGTaGGGACAGCTGGAGCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQLSHWSTVHTRKSQGHWWGRTL*GQLEHV Trigger: TACGTGCTCCAGCTGTCCCCACAGGGTCCTCCCCCA...CCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGGGAGGGTGGCATCCTTaGAGACCAGCATCCGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPTQVLSQLSHWSTVHTRGGWHP*RPASVR Trigger: ACGGACGGATGCTGGTCTCCAAGGATGCCACCCTCC...CCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCCCCTCCCACTTCCCATaGGGAGGGACCTCCAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LSHWSTVHTRKSQGHWRSPSHFP*GGTSKT Trigger: GGTTTTGGAGGTCCCTCCTCATGGGAAGTGGGAGGG...GCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR GCA 90 bp | AGTCAGGTAGGTTGGGTCCGGATACCCAAACCTGGGGCAAAGAGAAATGAGGATGGGCTGGGGTCTCCTTaGTCAGGAAGTCCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQVGWVRIPKPGAKRNEDGLGSP*SGSPTQ Trigger: CTGTGTGGGACTTCCTGAGCAAGGAGACCCCAGCCC...ATCCTCATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAACCTACCTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTAGGATGGACACCCGATaGTCCTCCCGAAGCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLSLVTGARYIPGKAKDTRMDTR*SSRSRA Trigger: GGCCCGGCTTCGGGAGGAGCATCGGGTGTCCATCCT...AGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGCGTTCTGGGGCTGGTTaGCCACAAGCTGCCCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQLSHWSTVHTRKSQGHWRSGAG*PQAARR Trigger: TCTACGGGCAGCTTGTGGGCAACCAGCCCCAGAACG...CCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGGTCAGCACCTTGTTaGCCTCGGGGCAGTCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLSLVTGARYIPGKAKDTGSAPC*PRGSPG Trigger: TCCCGGACTGCCCCGAGGGCAACAAGGTGCTGACCC...AGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR GCA 90 bp | CTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACGCTGGGGTCCCCCTGTaGAGCTGGTCTTGTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSQLSHWSTVHTRKSQGHAGVPL*SWSCGG Trigger: TCCACCACAAGACCAGCTGCACAGGGGGACCCCAGC...GTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | ATCCTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCGGAGGGTGGCATCCTTaGAGACCAGCATCCGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ILPTQVLSQLSHWSTVHTGGWHP*RPASVR Trigger: ACGGACGGATGCTGGTCTCCAAGGATGCCACCCTCC...GGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCAAGGACACTGGAGAAGCAGGGGCAGAGAAAATATGTACACGGAGTGAGGAGGGTACCGAACTCCTaGGTTGGGGTGTTCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KPRTLEKQGQRKYVHGVRRVPNS*VGVFSP Trigger: GGGGCTGAACACCCCAACCCAGGAGTTCGGTACCCT...CCTCACTCCGTGTACATATTTTCTCTGCCCCTGCTTCTCCAGTGTCCTTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | ATCCTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCGGTAGGCCACCCGTGTaGTACCAGGGTACCGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: ILPTQVLSQLSHWSTVHTGRPPV*YQGTEL Trigger: GAGTTCGGTACCCTGGTACCACACGGGTGGCCTACC...GGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCGGTAGGCCACCCGTGTaGTACCAGGGTACCGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHWSTVHTRKSQGHWRSGRPPV*YQGTEL Trigger: GAGTTCGGTACCCTGGTACCACACGGGTGGCCTACC...GCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | GTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGGTGAAGGTGAGGCGCTaGTCAAATGCCTTTCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VRQYSGAGVPETPSFLPRVKVRR*SNAFRN Trigger: GTTCCGAAAGGCATTTGACCAGCGCCTCACCTTCAC...CCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | CAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGTCCTTTCTCAGCTCAGCTGGTCTTGTGGTaGATGTCGTTCCAAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QGLEFQRPHPSYPGPFSAQLVLW*MSFQVM Trigger: CATCACTTGGAACGACATCCACCACAAGACCAGCTG...AGCTGAGAAAGGACCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGGTGCAGCTGGTCTTGTaGTGGATGTCGTTCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRQYSGAGVPETPSFLPRVQLVL*WMSFQV Trigger: CACTTGGAACGACATCCACCACAAGACCAGCTGCAC...CCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | ATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCCCTAGTCAGGTAGGTTaGGTCCGGATACCCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ICTRSEGTGALENSLCWSPSQVG*VRIPKQ Trigger: CTGTTTGGGTATCCGGACCCAACCTACCTGACTAGG...GCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| 3UTR CAA 72 bp | TCAGTCGTCTGTGATACCCTTGGCTCTCAGTTCCTCTaGCACCCTAGTCAGGTAGGTTGGGTCCGGATACCC | + |
|
Preference number: 4 (lower is better) Translates to: SVVCDTLGSQFL*HPSQVGWVRIP Trigger: GGGTATCCGGACCCAACCTACCTGACTAGGGTGCAAGAGGAACTGAGAGCCAAGGGTATCACAGACGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| CDS-3UTR TCA 90 bp | CTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGGCGTCAGGACCAGGATaGAAACAGACTGAGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPTQVLSQLSHWSTVHTRASGPG*KQTERV Trigger: CACCCTCTCAGTCTGTTTTCATCCTGGTCCTGACGC...CCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| CDS-3UTR GCA 90 bp | CTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACGGGCTGGGGTCTCCTTaGTCAGGAAGTCCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQLSHWSTVHTRKSQGHGLGSP*SGSPTQ Trigger: CTGTGTGGGACTTCCTGAGCAAGGAGACCCCAGCCC...GTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGCACAGAAGGAGTGCCTaGACTTCTCCAGCGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPTQVLSQLSHWSTVHTRHRRSA*TSPASW Trigger: CCAAGACGCTGGAGAAGTGCAGGCACTCCTTCTGTG...CCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR GCA 90 bp | AAATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGACACAGAAGGAGTGCCTaGACTTCTCCAGCGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KYVHGVRGREPWKTASAGHRRSA*TSPASW Trigger: CCAAGACGCTGGAGAAGTGCAGGCACTCCTTCTGTG...TCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCCAGGCCTTTTTCACCTaGAGGGCCCGTGTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHWSTVHTRKSQGHWRSQAFFT*RARVMQ Trigger: CTGCATCACACGGGCCCTGCAGGTGAAAAAGGCCTG...GCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR GCA 90 bp | AAATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGAGGCGCTGGTCAAATaGCTTTCGGAACAGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KYVHGVRGREPWKTASAGEALVK*LSEQGQ Trigger: CTGACCCTGTTCCGAAAGGCATTTGACCAGCGCCTC...TCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTTGGGGGAGGACCCTGTaGGGACAGCTGGAGCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLSLVTGARYIPGKAKDTWGRTL*GQLEHV Trigger: TACGTGCTCCAGCTGTCCCCACAGGGTCCTCCCCCA...AGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGCATACTTCTCGTAGCTaGGCAGCAGGAGGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPTQVLSQLSHWSTVHTRHTSRS*AAGGWH Trigger: ATGCCACCCTCCTGCTGCCCAGCTACGAGAAGTATG...CCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGGTCCGGATACCCAAACCTGGGGCAAAGAGAAATGAGGATCAGAGTTAGTACCGAACTCCTGGGTTaGGGTGTTCAGCCCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGSGYPNLGQREMRIRVSTELLG*GVQPPG Trigger: TCCAGGGGGCTGAACACCCCAACCCAGGAGTTCGGT...ACTAACTCTGATCCTCATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGGTCCGGATACCCAAACCTGGGGCAAAGAGAAATGAGGATCAGAGTTAGTAGGGTACCGAACTCCTaGGTTGGGGTGTTCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGSGYPNLGQREMRIRVSRVPNS*VGVFSP Trigger: GGGGCTGAACACCCCAACCCAGGAGTTCGGTACCCT...ACTAACTCTGATCCTCATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGCTCTCAGTTCCTCTTGCACCCTAGTCAGGTAGGTTGGGTCCGGATACCCCAGCTGGTCTTGTGGTaGATGTCGTTCCAAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGSQFLLHPSQVGWVRIPQLVLW*MSFQVM Trigger: CATCACTTGGAACGACATCCACCACAAGACCAGCTG...GGGTATCCGGACCCAACCTACCTGACTAGGGTGCAAGAGGAACTGAGAGCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR CCA 90 bp | AGTCAGGTAGGTTGGGTCCGGATACCCAAACCTGGGGCAAAGAGAAATGAGGATGTCCCCCTGTGCAGCTaGTCTTGTGGTGGATGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SQVGWVRIPKPGAKRNEDVPLCS*SCGGCR Trigger: ACGACATCCACCACAAGACCAGCTGCACAGGGGGAC...ATCCTCATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAACCTACCTGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGGTCCCCCTGTGCAGCTaGTCTTGTGGTGGATGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SQLSHWSTVHTRKSQGHWVPLCS*SCGGCR Trigger: ACGACATCCACCACAAGACCAGCTGCACAGGGGGAC...CCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR TCA 90 bp | AAATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAAAGTCTCGCCATCTATaGGGATGGACACCCGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: KYVHGVRGREPWKTASAGKSRHL*GWTPDA Trigger: AGCATCGGGTGTCCATCCTCATAGATGGCGAGACTT...TCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGGCTGGGGTCTCCTTaGTCAGGAAGTCCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSLVTGARYIPGKAKDTGLGSP*SGSPTQ Trigger: CTGTGTGGGACTTCCTGAGCAAGGAGACCCCAGCCC...AGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCACAGAAGGAGTGCCTaGACTTCTCCAGCGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQVLSQLSHWSTVHTRKSHRRSA*TSPASW Trigger: CCAAGACGCTGGAGAAGTGCAGGCACTCCTTCTGTG...GCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACCAGGCCTTTTTCACCTaGAGGGCCCGTGTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQLSHWSTVHTRKSQGHQAFFT*RARVMQ Trigger: CTGCATCACACGGGCCCTGCAGGTGAAAAAGGCCTG...GTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTCGTTCTGGGGCTGGTTaGCCACAAGCTGCCCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLSLVTGARYIPGKAKDTRSGAG*PQAARR Trigger: TCTACGGGCAGCTTGTGGGCAACCAGCCCCAGAACG...AGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCAAGGACACTGGAGAAGCAGGGGCAGAGAAAATATGTACACGGAGTGAGGGAGGCGCTGGTCAAATaGCTTTCGGAACAGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPRTLEKQGQRKYVHGVREALVK*LSEQGQ Trigger: CTGACCCTGTTCCGAAAGGCATTTGACCAGCGCCTC...CCTCACTCCGTGTACATATTTTCTCTGCCCCTGCTTCTCCAGTGTCCTTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCAAGGACACTGGAGAAGCAGGGGCAGAGAAAATATGTACACGGAGTGAGGAGAATCGGCCGCACATaGGGCAGGCCTTTTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KPRTLEKQGQRKYVHGVRRIGRT*GRPFSP Trigger: AGGTGAAAAAGGCCTGCCCCATGTGCGGCCGATTCT...CCTCACTCCGTGTACATATTTTCTCTGCCCCTGCTTCTCCAGTGTCCTTGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGAATCGGCCGCACATaGGGCAGGCCTTTTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LSHWSTVHTRKSQGHWRSRIGRT*GRPFSP Trigger: AGGTGAAAAAGGCCTGCCCCATGTGCGGCCGATTCT...GCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGAATCGGCCGCACATaGGGCAGGCCTTTTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ILPTQVLSQLSHWSTVHTRIGRT*GRPFSP Trigger: AGGTGAAAAAGGCCTGCCCCATGTGCGGCCGATTCT...GGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCATACTTCTCGTAGCTaGGCAGCAGGAGGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQVLSQLSHWSTVHTRKSHTSRS*AAGGWH Trigger: ATGCCACCCTCCTGCTGCCCAGCTACGAGAAGTATG...GCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | ATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCGGCGGGAAGACATATTaGATGACAATGGTGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: ICTRSEGTGALENSLCWSGGKTY*MTMVPY Trigger: GTATGGCACCATTGTCATCCAATATGTCTTCCCGCC...GCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTAGGTTGGGTCCGGATACCCAAACCTGGGGCAAAGAGAAATGAGGATCAGGTGAAGGTGAGGCGCTaGTCAAATGCCTTTCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVGWVRIPKPGAKRNEDQVKVRR*SNAFRN Trigger: GTTCCGAAAGGCATTTGACCAGCGCCTCACCTTCAC...CTGATCCTCATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAACCTACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAAGGTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTCAGCTGGTCTTGTGGTaGATGTCGTTCCAAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VQGETVFRGWSSRDPILPQLVLW*MSFQVM Trigger: CATCACTTGGAACGACATCCACCACAAGACCAGCTG...AGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCACCTTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCAAGTCTCGCCATCTATaGGGATGGACACCCGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQVLSQLSHWSTVHTRKSKSRHL*GWTPDA Trigger: AGCATCGGGTGTCCATCCTCATAGATGGCGAGACTT...GCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGCCTCCACAGGCTaGCATTCTGGACAGGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLSLVTGARYIPGKAKDTGASTG*HSGQDE Trigger: TTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCTCC...AGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 |
||
| CDS-3UTR GCA 90 bp | AGTCAGGTAGGTTGGGTCCGGATACCCAAACCTGGGGCAAAGAGAAATGAGGATCAGTCACTTTGTTCTTaGAGGAGCCTCCACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQVGWVRIPKPGAKRNEDQSLCS*RSLHRL Trigger: CAGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTG...ATCCTCATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAACCTACCTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCCAGTCACTTTGTTCTTaGAGGAGCCTCCACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILPTQVLSQLSHWSTVHTQSLCS*RSLHRL Trigger: CAGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTG...GGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCGTGAAGGTGAGGCGCTaGTCAAATGCCTTTCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSHWSTVHTRKSQGHWRSVKVRR*SNAFRN Trigger: GTTCCGAAAGGCATTTGACCAGCGCCTCACCTTCAC...GCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAGGTAGGTTGGGTCCGGATACCCAAACCTGGGGCAAAGAGAAATGAGGATGTGCAGCTGGTCTTGTaGTGGATGTCGTTCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQVGWVRIPKPGAKRNEDVQLVL*WMSFQV Trigger: CACTTGGAACGACATCCACCACAAGACCAGCTGCAC...ATCCTCATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAACCTACCTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGTCCCCCTGTGCAGCTaGTCTTGTGGTGGATGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSLVTGARYIPGKAKDTVPLCS*SCGGCR Trigger: ACGACATCCACCACAAGACCAGCTGCACAGGGGGAC...AGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACCAGTCACTTTGTTCTTaGAGGAGCCTCCACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSQLSHWSTVHTRKSQGHQSLCS*RSLHRL Trigger: CAGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTG...GTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | CTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGGGCGGGAAGACATATTaGATGACAATGGTGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LPTQVLSQLSHWSTVHTRGGKTY*MTMVPY Trigger: GTATGGCACCATTGTCATCCAATATGTCTTCCCGCC...CCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTAAGTCTCGCCATCTATaGGGATGGACACCCGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLSLVTGARYIPGKAKDTKSRHL*GWTPDA Trigger: AGCATCGGGTGTCCATCCTCATAGATGGCGAGACTT...AGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCGGCGGGAAGACATATTaGATGACAATGGTGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LSHWSTVHTRKSQGHWRSGGKTY*MTMVPY Trigger: GTATGGCACCATTGTCATCCAATATGTCTTCCCGCC...GCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTCCTAGTCAGGTAGGTTaGGTCCGGATACCCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSLVTGARYIPGKAKDTPSQVG*VRIPKQ Trigger: CTGTTTGGGTATCCGGACCCAACCTACCTGACTAGG...AGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
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| CDS-3UTR CCA 90 bp | TCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAATATGCTTTTTGGGTaGGGAGGGGAGGTGTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQLSHWSTVHTRKSQGHWNMLFG*GGEVLS Trigger: GCTTAACACCTCCCCTCCCCACCCAAAAAGCATATT...CCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| 3UTR CAA 72 bp | CTGGGGCAAAGAGAAATGAGGATCAGAGTTAGTCGTTaGGACTTGATCGTCCTTACCCACCCTCATTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGQREMRIRVSR*DLIVLTHPHFE Trigger: CTCAAAATGAGGGTGGGTAAGGACGATCAAGTCCAAACGACTAACTCTGATCCTCATTTCTCTTTGCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
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| CDS GCA 90 bp | GGGTGGCATCCTTGGAGACCAGCATCCGTCCGTTCTGGGGCTGGTTaGCCACAAGCTGCCCGTAGAATCGGCCGCACATGGGGCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GWHPWRPASVRSGAG*PQAARRIGRTWGRP Trigger: AGGCCTGCCCCATGTGCGGCCGATTCTACGGGCAGCTTGTGGGCAACCAGCCCCAGAACGGACGGATGCTGGTCTCCAAGGATGCCACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS CCA 90 bp | GTCCGGGAGGTAGGCCACCCGTGTGGTACCAGGGTACCGAACTCCTaGGTTGGGGTGTTCAGCCCCCTGGACGCCAGGCGGGAAGACATA | + |
|
Preference number: 5 (lower is better) Translates to: VREVGHPCGTRVPNS*VGVFSPLDARREDI Trigger: TATGTCTTCCCGCCTGGCGTCCAGGGGGCTGAACACCCCAACCCAGGAGTTCGGTACCCTGGTACCACACGGGTGGCCTACCTCCCGGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR CAA 90 bp | AGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCACTTGGCCAGTGGGGGAACAGGGTCAGCACCTaGTTGCCCTCGGGGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGREPWKTASAGALGQWGNRVST*LPSGQS Trigger: GGACTGCCCCGAGGGCAACAAGGTGCTGACCCTGTT...CCCCCACTGGCCAAGTGCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS TCA 90 bp | GTGGGGACAGCTGGAGCACGTAGATGTCAGAAGTCTCGCCATCTATaGGGATGGACACCCGATGCTCCTCCCGAAGCCGGGCCAGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGTAGARRCQKSRHL*GWTPDAPPEAGPAG Trigger: CCCGGCTGGCCCGGCTTCGGGAGGAGCATCGGGTGTCCATCCTCATAGATGGCGAGACTTCTGACATCTACGTGCTCCAGCTGTCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 ENSMUST00000144322.8 |
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| CDS TCA 90 bp | ATCGGCCGCACATGGGGCAGGCCTTTTTCACCTGCAGGGCCCGTGTaGTGCAGCCCTCACAGAAGGAGTGCCTGCACTTCTCCAGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IGRTWGRPFSPAGPV*CSPHRRSACTSPAS Trigger: AGACGCTGGAGAAGTGCAGGCACTCCTTCTGTGAGGGCTGCATCACACGGGCCCTGCAGGTGAAAAAGGCCTGCCCCATGTGCGGCCGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS-3UTR CAA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCAGGGTCAGCACCTTGTaGCCCTCGGGGCAGTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGRVSTL*PSGQSG Trigger: CCCGGACTGCCCCGAGGGCAACAAGGTGCTGACCCT...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS CCA 90 bp | TGGTGCCATACTTCTCGTAGCTGGGCAGCAGGAGGGTGGCATCCTTaGAGACCAGCATCCGTCCGTTCTGGGGCTGGTTGCCCACAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WCHTSRSWAAGGWHP*RPASVRSGAGCPQA Trigger: AGCTTGTGGGCAACCAGCCCCAGAACGGACGGATGCTGGTCTCCAAGGATGCCACCCTCCTGCTGCCCAGCTACGAGAAGTATGGCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCACTTGGCCAGTGGGGGGGCTCTCAGTTCCTCTaGCACCCTAGTCAGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGREPWKTASAGALGQWGGSQFL*HPSQVG Trigger: ACCTACCTGACTAGGGTGCAAGAGGAACTGAGAGCC...CCCCCACTGGCCAAGTGCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCT 61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS TCA 90 bp | TGGGGTGTTCAGCCCCCTGGACGCCAGGCGGGAAGACATATTGGATaGCAATGGTGCCATACTTCTCGTAGCTGGGCAGCAGGAGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WGVQPPGRQAGRHIG*QWCHTSRSWAAGGW Trigger: CCACCCTCCTGCTGCCCAGCTACGAGAAGTATGGCACCATTGTCATCCAATATGTCTTCCCGCCTGGCGTCCAGGGGGCTGAACACCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS CCA 90 bp | AAAGGGAGACGCCATGGAGAGGGAGATGAGGAGGAGTCGCACAGCTaGGGTCCCCCTGTGCAGCTGGTCTTGTGGTGGATGTCGTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KGRRHGEGDEEESHS*GPPVQLVLWWMSFQ Trigger: TTGGAACGACATCCACCACAAGACCAGCTGCACAGGGGGACCCCAGCTGTGCGACTCCTCCTCATCTCCCTCTCCATGGCGTCTCCCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR CAA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCCGGGCTGGGGTCTCCTaGCTCAGGAAGTCCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGRAGVS*LRKSHT Trigger: TGTGTGGGACTTCCTGAGCAAGGAGACCCCAGCCCG...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTCTCAGTTCCTCTTGCACCCTAGTCAGGTAGGTTGGGTCCGGATACCCAGGAGGGTGGCATCCTaGGAGACCAGCATCCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LGSQFLLHPSQVGWVRIPRRVAS*ETSIRP Trigger: CGGACGGATGCTGGTCTCCAAGGATGCCACCCTCCT...GGGTATCCGGACCCAACCTACCTGACTAGGGTGCAAGAGGAACTGAGAGCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTAGGTTGGGTCCGGATACCCAAACCTGGGGCAAAGAGAAATGAGGATCAGAGGGTCAGCACCTTGTaGCCCTCGGGGCAGTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QVGWVRIPKPGAKRNEDQRVSTL*PSGQSG Trigger: CCCGGACTGCCCCGAGGGCAACAAGGTGCTGACCCT...CTGATCCTCATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAACCTACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR CAA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCAACAGGGTCAGCACCTaGTTGCCCTCGGGGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGNRVST*LPSGQS Trigger: GGACTGCCCCGAGGGCAACAAGGTGCTGACCCTGTT...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS GCA 90 bp | TGTAGTCATGGACGTGCCGATGGTGAAGGTGAGGCGCTGGTCAAATaGCTTTCGGAACAGGGTCAGCACCTTGTTGCCCTCGGGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CSHGRADGEGEALVK*LSEQGQHLVALGAV Trigger: GACTGCCCCGAGGGCAACAAGGTGCTGACCCTGTTCCGAAAGGCATTTGACCAGCGCCTCACCTTCACCATCGGCACGTCCATGACTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS CCA 90 bp | GGTCTCCCTGTAGTCATGGACGTGCCGATGGTGAAGGTGAGGCGCTaGTCAAATGCCTTTCGGAACAGGGTCAGCACCTTGTTGCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GLPVVMDVPMVKVRR*SNAFRNRVSTLLPS Trigger: CGAGGGCAACAAGGTGCTGACCCTGTTCCGAAAGGCATTTGACCAGCGCCTCACCTTCACCATCGGCACGTCCATGACTACAGGGAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAAGGGTCAGCACCTTGTaGCCCTCGGGGCAGTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SFLPRSFLSLVTGARYIPRVSTL*PSGQSG Trigger: CCCGGACTGCCCCGAGGGCAACAAGGTGCTGACCCT...TGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS GCA 90 bp | TTTTTCACCTGCAGGGCCCGTGTGATGCAGCCCTCACAGAAGGAGTaGCTGCACTTCTCCAGCGTCTTGGCATTCTGTATCTCCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FFTCRARVMQPSQKE*LHFSSVLAFCISPR Trigger: CCTGGGGGAGATACAGAATGCCAAGACGCTGGAGAAGTGCAGGCACTCCTTCTGTGAGGGCTGCATCACACGGGCCCTGCAGGTGAAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCTCTTTCAGTAGCCCCTaGAGAGCCTTCCTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGSFSSP*RAFLAR Trigger: CCTGGCCAGGAAGGCTCTCAAGGGGCTACTGAAAGA...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | AAATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAAACAGGGTCAGCACCTaGTTGCCCTCGGGGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KYVHGVRGREPWKTASAGNRVST*LPSGQS Trigger: GGACTGCCCCGAGGGCAACAAGGTGCTGACCCTGTT...TCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCACTTGGCCAGTGGGGGTTCCAAGTGATGACATaGGGTCTCCCTGTAGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RGREPWKTASAGALGQWGFQVMT*GLPVVM Trigger: CATGACTACAGGGAGACCCAATGTCATCACTTGGAA...CCCCCACTGGCCAAGTGCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCCGGGCTGGGGTCTCCTaGCTCAGGAAGTCCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: ILPTQVLSQLSHWSTVHTRAGVS*LRKSHT Trigger: TGTGTGGGACTTCCTGAGCAAGGAGACCCCAGCCCG...GGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCCACTTCTCCAGCGTCTaGGCATTCTGTATCTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGHFSSV*AFCISP Trigger: GGGGGAGATACAGAATGCCAAGACGCTGGAGAAGTG...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCAGGAGGGTGGCATCCTaGGAGACCAGCATCCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TQVLSQLSHWSTVHTRKSRRVAS*ETSIRP Trigger: CGGACGGATGCTGGTCTCCAAGGATGCCACCCTCCT...GCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTCTCAGTTCCTCTTGCACCCTAGTCAGGTAGGTTGGGTCCGGATACCCCCTGTGCAGCTGGTCTaGTGGTGGATGTCGTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LGSQFLLHPSQVGWVRIPPVQLV*WWMSFQ Trigger: TTGGAACGACATCCACCACAAGACCAGCTGCACAGG...GGGTATCCGGACCCAACCTACCTGACTAGGGTGCAAGAGGAACTGAGAGCCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR CAA 90 bp | ATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGAGCGGCTCTCAGTTCCTCTaGCACCCTAGTCAGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ICTRSEGTGALENSLCWSGSQFL*HPSQVG Trigger: ACCTACCTGACTAGGGTGCAAGAGGAACTGAGAGCC...GCTCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS GCA 90 bp | TGCTCAGGAAGTCCCACACAGGCTTGGAGACAGTCACTTTGTTCTTaGAGGAGCCTCCACAGGCTGCCATTCTGGACAGGACGAACGACA | + |
|
Preference number: 5 (lower is better) Translates to: CSGSPTQAWRQSLCS*RSLHRLPFWTGRTT Trigger: TGTCGTTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTGTCTCCAAGCCTGTGTGGGACTTCCTGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGACAGTCACTTTGTTCTaGCAGGAGCCTCCACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VRQYSGAGVPETPSFLPRTVTLF*QEPPQA Trigger: AGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTGT...CCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCACAGTCACTTTGTTCTaGCAGGAGCCTCCACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGTVTLF*QEPPQA Trigger: AGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTGT...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGGTCCGGATACCCAAACCTGGGGCAAAGAGAAATGAGGATCAGAGTTAGTCGGGCTGGGGTCTCCTaGCTCAGGAAGTCCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: VGSGYPNLGQREMRIRVSRAGVS*LRKSHT Trigger: TGTGTGGGACTTCCTGAGCAAGGAGACCCCAGCCCG...ACTAACTCTGATCCTCATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR CAA 90 bp | AAATATGTACACGGAGTGAGGGGACGGGAGCCTTGGAAAACAGCCTCTGCTGGATCTTTCAGTAGCCCCTaGAGAGCCTTCCTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KYVHGVRGREPWKTASAGSFSSP*RAFLAR Trigger: CCTGGCCAGGAAGGCTCTCAAGGGGCTACTGAAAGA...TCCAGCAGAGGCTGTTTTCCAAGGCTCCCGTCCCCTCACTCCGTGTACATATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAAGGTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTCCTGTGCAGCTGGTCTaGTGGTGGATGTCGTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VQGETVFRGWSSRDPILPPVQLV*WWMSFQ Trigger: TTGGAACGACATCCACCACAAGACCAGCTGCACAGG...AGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCACCTTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTACCCAGGTCGTCTGTGATACCCTaGGCTCTCAGTTCCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VRQYSGAGVPETPSFLPRSSVIP*ALSSSC Trigger: GCAAGAGGAACTGAGAGCCAAGGGTATCACAGACGA...CCTGGGTAGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | CACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGAGAAGCAGGGGCTCGTCTGTGATACCCTaGGCTCTCAGTTCCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HWSTVHTRKSQGHWRSRGSSVIP*ALSSSC Trigger: GCAAGAGGAACTGAGAGCCAAGGGTATCACAGACGA...GCCCCTGCTTCTCCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGCACTTCTCCAGCGTCTaGGCATTCTGTATCTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPTQVLSQLSHWSTVHTRHFSSV*AFCISP Trigger: GGGGGAGATACAGAATGCCAAGACGCTGGAGAAGTG...CCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTAGGAGGGTGGCATCCTaGGAGACCAGCATCCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: FLSLVTGARYIPGKAKDTRRVAS*ETSIRP Trigger: CGGACGGATGCTGGTCTCCAAGGATGCCACCCTCCT...AGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGCCTGTGCAGCTGGTCTaGTGGTGGATGTCGTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPTQVLSQLSHWSTVHTRPVQLV*WWMSFQ Trigger: TTGGAACGACATCCACCACAAGACCAGCTGCACAGG...CCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS GCA 90 bp | TGCTCAGGAAGTCCCACACAGGCTTGGAGACAGTCACTTTGTTCTTaGAGGAGCCTCCACAGGCTGCCATTTTTGATCCGGAGGAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CSGSPTQAWRQSLCS*RSLHRLPFLIRRSL Trigger: TAAGCTCCTCCGGATCAAAAATGGCAGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTGTCTCCAAGCCTGTGTGGGACTTCCTGAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130855.8 ENSMUST00000144322.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAAGGTGAGACAGTATTCAGGGGCTGGAGTTCCAGAGACCCCATCCTTCCTAAGTCCCACACAGGCTaGGAGACAGTCACTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VQGETVFRGWSSRDPILPKSHTG*ETVTLF Trigger: GAACAAAGTGACTGTCTCCAAGCCTGTGTGGGACTT...AGGAAGGATGGGGTCTCTGGAACTCCAGCCCCTGAATACTGTCTCACCTTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGTTGGAGACAGTCACTTaGTTCTTGCAGGAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPTQVLSQLSHWSTVHTRLETVT*FLQEPP Trigger: TGGAGGCTCCTGCAAGAACAAAGTGACTGTCTCCAA...CCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTTCTTTCAGTAGCCCCTaGAGAGCCTTCCTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLSLVTGARYIPGKAKDTSFSSP*RAFLAR Trigger: CCTGGCCAGGAAGGCTCTCAAGGGGCTACTGAAAGA...AGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGGTCCGGATACCCAAACCTGGGGCAAAGAGAAATGAGGATCAGAGTTAGTCACTTCTCCAGCGTCTaGGCATTCTGTATCTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGSGYPNLGQREMRIRVSHFSSV*AFCISP Trigger: GGGGGAGATACAGAATGCCAAGACGCTGGAGAAGTG...ACTAACTCTGATCCTCATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR CAA 90 bp | AAGCCAAGGACACTGGAGAAGCAGGGGCAGAGAAAATATGTACACGGAGTGAGGTTGGAGACAGTCACTTaGTTCTTGCAGGAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KPRTLEKQGQRKYVHGVRLETVT*FLQEPP Trigger: TGGAGGCTCCTGCAAGAACAAAGTGACTGTCTCCAA...CCTCACTCCGTGTACATATTTTCTCTGCCCCTGCTTCTCCAGTGTCCTTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAAGTCCCACACAGGCTaGGAGACAGTCACTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILPTQVLSQLSHWSTVHTKSHTG*ETVTLF Trigger: GAACAAAGTGACTGTCTCCAAGCCTGTGTGGGACTT...GGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAGGCGGGAAGACATATaGGATGACAATGGTGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: LPTQVLSQLSHWSTVHTRRREDI*DDNGAI Trigger: TATGGCACCATTGTCATCCAATATGTCTTCCCGCCT...CCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGTAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAGGTCCTTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCAGGCGGGAAGACATATaGGATGACAATGGTGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: TQVLSQLSHWSTVHTRKSRREDI*DDNGAI Trigger: TATGGCACCATTGTCATCCAATATGTCTTCCCGCCT...GCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAAGGACCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | TCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTGGTTCCAAGTGATGACATaGGGTCTCCCTGTAGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SQLSHWSTVHTRKSQGHWFQVMT*GLPVVM Trigger: CATGACTACAGGGAGACCCAATGTCATCACTTGGAA...CCAGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTTTGGAGACAGTCACTTaGTTCTTGCAGGAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLSLVTGARYIPGKAKDTLETVT*FLQEPP Trigger: TGGAGGCTCCTGCAAGAACAAAGTGACTGTCTCCAA...AGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCAGCTTAGTCACTGGAGCACGGTACATACCAGGAAAAGCCAAGGACACTAAGTCCCACACAGGCTaGGAGACAGTCACTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLSLVTGARYIPGKAKDTKSHTG*ETVTLF Trigger: GAACAAAGTGACTGTCTCCAAGCCTGTGTGGGACTT...AGTGTCCTTGGCTTTTCCTGGTATGTACCGTGCTCCAGTGACTAAGCTGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGGTCCGGATACCCAAACCTGGGGCAAAGAGAAATGAGGATCAGAGTTAGTAGGCGGGAAGACATATaGGATGACAATGGTGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: VGSGYPNLGQREMRIRVSRREDI*DDNGAI Trigger: TATGGCACCATTGTCATCCAATATGTCTTCCCGCCT...ACTAACTCTGATCCTCATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGGTCCGGATACCCAAACCTGGGGCAAAGAGAAATGAGGATCAGAGTTAGTTTCCAAGTGATGACATaGGGTCTCCCTGTAGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: VGSGYPNLGQREMRIRVSFQVMT*GLPVVM Trigger: CATGACTACAGGGAGACCCAATGTCATCACTTGGAA...ACTAACTCTGATCCTCATTTCTCTTTGCCCCAGGTTTGGGTATCCGGACCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116229.2 |
||
| CDS CCA 72 bp | GTAGGCCACCCGTGTGGTACCAGGGTACCGAACTCCTaGGTTGGGGTGTTCAGCCCCCTGGACGCCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VGHPCGTRVPNS*VGVFSPLDARR Trigger: CCGCCTGGCGTCCAGGGGGCTGAACACCCCAACCCAGGAGTTCGGTACCCTGGTACCACACGGGTGGCCTAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS CCA 72 bp | CCACCCGTGTGGTACCAGGGTACCGAACTCCTGGGTTaGGGTGTTCAGCCCCCTGGACGCCAGGCGGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PPVWYQGTELLG*GVQPPGRQAGR Trigger: TCTTCCCGCCTGGCGTCCAGGGGGCTGAACACCCCAACCCAGGAGTTCGGTACCCTGGTACCACACGGGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS CCA 72 bp | TGCCCTCGGGGCAGTCCGGGAGGTAGGCCACCCGTGTaGTACCAGGGTACCGAACTCCTGGGTTGGGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: CPRGSPGGRPPV*YQGTELLGWGV Trigger: AACACCCCAACCCAGGAGTTCGGTACCCTGGTACCACACGGGTGGCCTACCTCCCGGACTGCCCCGAGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS GCA 72 bp | TCAGAAGTCTCGCCATCTATGAGGATGGACACCCGATaGTCCTCCCGAAGCCGGGCCAGCCGGGCTGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SEVSPSMRMDTR*SSRSRASRAGV Trigger: GACCCCAGCCCGGCTGGCCCGGCTTCGGGAGGAGCATCGGGTGTCCATCCTCATAGATGGCGAGACTTCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 ENSMUST00000144322.8 |
||
| CDS GCA 72 bp | CCTTGGAGACCAGCATCCGTCCGTTCTGGGGCTGGTTaGCCACAAGCTGCCCGTAGAATCGGCCGCACATGG | + |
|
Preference number: 6 (lower is better) Translates to: PWRPASVRSGAG*PQAARRIGRTW Trigger: CCATGTGCGGCCGATTCTACGGGCAGCTTGTGGGCAACCAGCCCCAGAACGGACGGATGCTGGTCTCCAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS TCA 72 bp | GCTGGAGCACGTAGATGTCAGAAGTCTCGCCATCTATaGGGATGGACACCCGATGCTCCTCCCGAAGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGARRCQKSRHL*GWTPDAPPEAG Trigger: CCCGGCTTCGGGAGGAGCATCGGGTGTCCATCCTCATAGATGGCGAGACTTCTGACATCTACGTGCTCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 ENSMUST00000144322.8 |
||
| CDS TCA 72 bp | ACATGGGGCAGGCCTTTTTCACCTGCAGGGCCCGTGTaGTGCAGCCCTCACAGAAGGAGTGCCTGCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TWGRPFSPAGPV*CSPHRRSACTS Trigger: AGAAGTGCAGGCACTCCTTCTGTGAGGGCTGCATCACACGGGCCCTGCAGGTGAAAAAGGCCTGCCCCATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS GCA 72 bp | GGACGTGCCGATGGTGAAGGTGAGGCGCTGGTCAAATaGCTTTCGGAACAGGGTCAGCACCTTGTTGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GRADGEGEALVK*LSEQGQHLVAL Trigger: GAGGGCAACAAGGTGCTGACCCTGTTCCGAAAGGCATTTGACCAGCGCCTCACCTTCACCATCGGCACGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS CCA 72 bp | GGCTCTCAGTTCCTCTTGCACCCTAGTCAGGTAGGTTaGGTCCGGATACCCAAACAGCTGGGGTCCCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GSQFLLHPSQVG*VRIPKQLGSPC Trigger: ACAGGGGGACCCCAGCTGTTTGGGTATCCGGACCCAACCTACCTGACTAGGGTGCAAGAGGAACTGAGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000130855.8 |
||
| CDS CAA 90 bp | TGGGTTGGGGTGTTCAGCCCCCTGGACGCCAGGCGGGAAGACATATaGGATGACAATGGTGCCATACTTCTCGTAGCTGGGCAGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: WVGVFSPLDARREDI*DDNGAILLVAGQQE Trigger: CTCCTGCTGCCCAGCTACGAGAAGTATGGCACCATTGTCATCCAATATGTCTTCCCGCCTGGCGTCCAGGGGGCTGAACACCCCAACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS CAA 90 bp | GTGATGCAGCCCTCACAGAAGGAGTGCCTGCACTTCTCCAGCGTCTaGGCATTCTGTATCTCCCCCAGGCAAATGGGGCAGGTGGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VMQPSQKECLHFSSV*AFCISPRQMGQVVS Trigger: GGAAACCACCTGCCCCATTTGCCTGGGGGAGATACAGAATGCCAAGACGCTGGAGAAGTGCAGGCACTCCTTCTGTGAGGGCTGCATCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
||
| CDS TCA 72 bp | CAGCCCCCTGGACGCCAGGCGGGAAGACATATTGGATaGCAATGGTGCCATACTTCTCGTAGCTGGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QPPGRQAGRHIG*QWCHTSRSWAA Trigger: TGCTGCCCAGCTACGAGAAGTATGGCACCATTGTCATCCAATATGTCTTCCCGCCTGGCGTCCAGGGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS GCA 72 bp | TGTATCTCCCCCAGGCAAATGGGGCAGGTGGTTTCCTaGTCTTCAGCGTCCTCTCTGAGACGAGGAGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: CISPRQMGQVVS*SSASSLRRGGS Trigger: ACTCCCTCCTCGTCTCAGAGAGGACGCTGAAGAGCAGGAAACCACCTGCCCCATTTGCCTGGGGGAGATACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS GCA 72 bp | TGCAGGGCCCGTGTGATGCAGCCCTCACAGAAGGAGTaGCTGCACTTCTCCAGCGTCTTGGCATTCTGTATC | + |
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Preference number: 6 (lower is better) Translates to: CRARVMQPSQKE*LHFSSVLAFCI Trigger: GATACAGAATGCCAAGACGCTGGAGAAGTGCAGGCACTCCTTCTGTGAGGGCTGCATCACACGGGCCCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS CCA 72 bp | CCTCACAGAAGGAGTGCCTGCACTTCTCCAGCGTCTTaGCATTCTGTATCTCCCCCAGGCAAATGGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PHRRSACTSPAS*HSVSPPGKWGR Trigger: CCTGCCCCATTTGCCTGGGGGAGATACAGAATGCCAAGACGCTGGAGAAGTGCAGGCACTCCTTCTGTGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS CAA 90 bp | GTCTCCTTGCTCAGGAAGTCCCACACAGGCTTGGAGACAGTCACTTaGTTCTTGCAGGAGCCTCCACAGGCTGCCATTCTGGACAGGACG | + |
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Preference number: 6 (lower is better) Translates to: VSLLRKSHTGLETVT*FLQEPPQAAILDRT Trigger: CGTCCTGTCCAGAATGGCAGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTGTCTCCAAGCCTGTGTGGGACTTCCTGAGCAAGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 |
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| CDS CCA 72 bp | GTAGTCATGGACGTGCCGATGGTGAAGGTGAGGCGCTaGTCAAATGCCTTTCGGAACAGGGTCAGCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: VVMDVPMVKVRR*SNAFRNRVSTL Trigger: CAAGGTGCTGACCCTGTTCCGAAAGGCATTTGACCAGCGCCTCACCTTCACCATCGGCACGTCCATGACTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS CAA 72 bp | GTGTTCAGCCCCCTGGACGCCAGGCGGGAAGACATATaGGATGACAATGGTGCCATACTTCTCGTAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VFSPLDARREDI*DDNGAILLVAG Trigger: CCCAGCTACGAGAAGTATGGCACCATTGTCATCCAATATGTCTTCCCGCCTGGCGTCCAGGGGGCTGAACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 ENSMUST00000130855.8 |
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| CDS CAA 90 bp | TTGCTCAGGAAGTCCCACACAGGCTTGGAGACAGTCACTTTGTTCTaGCAGGAGCCTCCACAGGCTGCCATTCTGGACAGGACGAACGAC | + |
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Preference number: 6 (lower is better) Translates to: LLRKSHTGLETVTLF*QEPPQAAILDRTND Trigger: GTCGTTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTGTCTCCAAGCCTGTGTGGGACTTCCTGAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 |
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| CDS GCA 72 bp | AGTCCCACACAGGCTTGGAGACAGTCACTTTGTTCTTaGAGGAGCCTCCACAGGCTGCCATTCTGGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: SPTQAWRQSLCS*RSLHRLPFWTG Trigger: TCCTGTCCAGAATGGCAGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTGTCTCCAAGCCTGTGTGGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 |
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| CDS CAA 72 bp | AAGTCCCACACAGGCTTGGAGACAGTCACTTTGTTCTaGCAGGAGCCTCCACAGGCTGCCATTCTGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: KSHTGLETVTLF*QEPPQAAILDR Trigger: CCTGTCCAGAATGGCAGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTGTCTCCAAGCCTGTGTGGGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 |
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| CDS CAA 72 bp | CTCAGGAAGTCCCACACAGGCTTGGAGACAGTCACTTaGTTCTTGCAGGAGCCTCCACAGGCTGCCATTCTG | + |
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Preference number: 6 (lower is better) Translates to: LRKSHTGLETVT*FLQEPPQAAIL Trigger: CAGAATGGCAGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTGTCTCCAAGCCTGTGTGGGACTTCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038217.14 ENSMUST00000116229.2 |
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| CDS GCA 72 bp | AGTCCCACACAGGCTTGGAGACAGTCACTTTGTTCTTaGAGGAGCCTCCACAGGCTGCCATTTTTGATCCGG | + |
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Preference number: 6 (lower is better) Translates to: SPTQAWRQSLCS*RSLHRLPFLIR Trigger: CCGGATCAAAAATGGCAGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTGTCTCCAAGCCTGTGTGGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130855.8 ENSMUST00000144322.8 |
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| CDS CAA 90 bp | TTGCTCAGGAAGTCCCACACAGGCTTGGAGACAGTCACTTTGTTCTaGCAGGAGCCTCCACAGGCTGCCATTTTTGATCCGGAGGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLRKSHTGLETVTLF*QEPPQAAIFDPEEL Trigger: AAGCTCCTCCGGATCAAAAATGGCAGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTGTCTCCAAGCCTGTGTGGGACTTCCTGAGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130855.8 ENSMUST00000144322.8 |
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| CDS CAA 72 bp | CTCAGGAAGTCCCACACAGGCTTGGAGACAGTCACTTaGTTCTTGCAGGAGCCTCCACAGGCTGCCATTTTT | + |
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Preference number: 6 (lower is better) Translates to: LRKSHTGLETVT*FLQEPPQAAIF Trigger: AAAAATGGCAGCCTGTGGAGGCTCCTGCAAGAACAAAGTGACTGTCTCCAAGCCTGTGTGGGACTTCCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130855.8 ENSMUST00000144322.8 |
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