Pregenerated sensors for DTX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004947Ensembl transcript IDs: ENSMUST00000005072.10, ENSMUST00000111142.9, ENSMUST00000111144.8, ENSMUST00000111145.10, ENSMUST00000125827.8
Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCCGCCCAGGGCTGTGGGGTCGGCAGAGGCAGGCCCGAGGTCACTaGTGTTCCAGGCAGTCTTCGGTCACTCCCTGGGCAGCGAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: PRPGLWGRQRQARGH*CSRQSSVTPWAASS Trigger: TGAGCTCGCTGCCCAGGGAGTGACCGAAGACTGCCTGGAACAGCAGTGACCTCGGGCCTGCCTCTGCCGACCCCACAGCCCTGGGCGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125827.8 |
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| 3UTR TCA 90 bp | TCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTaGGGTAGCTCCAGCTTAAGCTTCCACAAGTACAATACTGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: SPAHPGLEGPVPSVH*GSSSLSFHKYNTEE Trigger: CTCCTCAGTATTGTACTTGTGGAAGCTTAAGCTGGAGCTACCTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR GCA 90 bp | AGGATGGTGGCAGCAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTaGAACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: RMVAAEARSPTFRRR*NPSGLHKPNTHSCL Trigger: GAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTGCTGCCACCATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTTGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCCTCGGTGTACTTTCTaGTCACCTGCTCCGGCTCGG | + |
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Preference number: 2 (lower is better) Translates to: PLAGSPAHPGLEGPVPSVPRCTF*SPAPAR Trigger: CCGAGCCGGAGCAGGTGATCAGAAAGTACACCGAGG...CACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125827.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGAGTGTGATCGTCCCTGCTCACCCCTTGCTGGGTCACCAGCCCACCCAGGGCCGGTCCCATCCGTaGACTGAGGTAGCTCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: AGSVIVPAHPLLGHQPTQGRSHP*TEVAPA Trigger: AGCTGGAGCTACCTCAGTGCACGGATGGGACCGGCC...CTGGGTGGGCTGGTGACCCAGCAAGGGGTGAGCAGGGACGATCACACTCCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCGAGGTCACTGCTGTTCCAGGCAGTCTTCGGTCACTCCCTGGGCAGCGAGCATGGCTTCCCAGGGCTaGGGTGCTCTGGTCCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: ARGHCCSRQSSVTPWAASMASQG*GALVPG Trigger: TCCAGGGACCAGAGCACCCCAGCCCTGGGAAGCCAT...GCTCGCTGCCCAGGGAGTGACCGAAGACTGCCTGGAACAGCAGTGACCTCGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125827.8 |
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| 3UTR-3UTR GCA 90 bp | ACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGGAAGGCACACCTTCCTaGCCACCCGCCCCGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TILRRVPIFQADPGADRMEGTPS*PPAPPR Trigger: CCTGGGCGGGGCGGGTGGGCAGGAAGGTGTGCCTTC...CATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGGCCCAACACACACTCTTaGCTCTCACCGAAGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: WVTSPPRAGRAGPIRALRPNTHS*LSPKAH Trigger: GTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGG...CCTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR-3UTR CCA 90 bp | ACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGCAGCCCACCCAGGGCTaGAAGGGCCGGTCCCATCCG | + |
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Preference number: 2 (lower is better) Translates to: TILRRVPIFQADPGADRMQPTQG*KGRSHP Trigger: CGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTG...CATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR-3UTR GCA 90 bp | CAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGTGGGCCCGAGGGCCTTaGTGTCAGTCATGTCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: QHTLLPLTEGTPSCPPAPWARGP*CQSCHC Trigger: ACAGTGACATGACTGACAGCAAGGCCCTCGGGCCCA...CGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125827.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGGAGTGTGATCGTCCCTGCTCACCCCTTGCTGGGTCACCAGCCCACCCACCCAACACACACTCTTaGCTCTCACCGAAGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: SWECDRPCSPLAGSPAHPPNTHS*LSPKAH Trigger: GTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGG...TGGGTGGGCTGGTGACCCAGCAAGGGGTGAGCAGGGACGATCACACTCCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTGCAACCCCAGTGGGCTACACATCCCTGCTCACCCCTTaGTGGGTCACCAGCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: QRQEAQPLGGGATPVGYTSLLTP*WVTSPP Trigger: GGGTGGGCTGGTGACCCAGCAAGGGGTGAGCAGGGA...TGTGTAGCCCACTGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTGCAACCCCAGTGGGCTACACAGAGTGTGATCGTCCCTaGTCACCCCTTGCTGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: QRQEAQPLGGGATPVGYTECDRP*SPLAGS Trigger: TGACCCAGCAAGGGGTGAGCAGGGACGATCACACTC...TGTGTAGCCCACTGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR GCA 72 bp | GGGCTGTGGGGTCGGCAGAGGCAGGCCCGAGGTCACTaGTGTTCCAGGCAGTCTTCGGTCACTCCCTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: GLWGRQRQARGH*CSRQSSVTPWA Trigger: TGCCCAGGGAGTGACCGAAGACTGCCTGGAACAGCAGTGACCTCGGGCCTGCCTCTGCCGACCCCACAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125827.8 |
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| 3UTR CCA 72 bp | GCTCACCCCTTGCTGGGTCACCAGCCCACCCAGGGCTaGAAGGGCCGGTCCCATCCGTGCACTGAGGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: AHPLLGHQPTQG*KGRSHPCTEVA Trigger: AGCTACCTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGGGGTGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR-3UTR CAA 90 bp | CTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGGTGGCAACCCAACACACACTCTaGCCTCTCACCGAAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LRRVPIFQADPGADRMVATQHTL*PLTEGT Trigger: TGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGT...TGCCACCATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR GCA 72 bp | AACCCCAGTGGGCTACACAAACCCAACACACACTCTTaGCTCTCACCGAAGGCACACCTTCCTGCCCACCCG | + |
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Preference number: 3 (lower is better) Translates to: NPSGLHKPNTHS*LSPKAHLPAHP Trigger: CGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR-3UTR CAA 90 bp | GGATGGTGGCAGCAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTGCAACCCCAACCCAACACACACTCTaGCCTCTCACCGAAGGCACA | + |
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Preference number: 3 (lower is better) Translates to: GWWQQRQEAQPLGGGATPTQHTL*PLTEGT Trigger: TGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGT...TGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTGCTGCCACCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR TCA 72 bp | CACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTaGGGTAGCTCCAGCTTAAGCTTCCACAAGTACAAT | + |
|
Preference number: 3 (lower is better) Translates to: HPGLEGPVPSVH*GSSSLSFHKYN Trigger: ATTGTACTTGTGGAAGCTTAAGCTGGAGCTACCTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR-3UTR CAA 90 bp | TCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGCCTGGGAGGGACATTaGGAACCTGAACACCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: STSTILRRVPIFQADPGAAWEGH*EPEHLH Trigger: ATGGAGGTGTTCAGGTTCCAAATGTCCCTCCCAGGC...TGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125827.8 |
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| 3UTR GCA 72 bp | GCAGCAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTaGAACCCCAGTGGGCTACACAAACCCAACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: AAEARSPTFRRR*NPSGLHKPNTH Trigger: GTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR TCA 90 bp | CCCCTTGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGGGAGGTGGACGGTCCTaGGGGCAGGAGCTGAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PLAGSPAHPGLEGPVPSVGGGRS*GQELRP Trigger: GGGCCTCAGCTCCTGCCCTCAGGACCGTCCACCTCC...CACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | CCCCTTGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCCTGCAAGCGCCTGCTaGACCCTGCTGGCCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: PLAGSPAHPGLEGPVPSVPASAC*TLLAFG Trigger: GCCAAAGGCCAGCAGGGTCCAGCAGGCGCTTGCAGG...CACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | CCCCTTGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGGGAGCTCCAGGACCTTaGGGCCCTGAGGGCTATCTG | + |
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Preference number: 4 (lower is better) Translates to: PLAGSPAHPGLEGPVPSVGAPGP*GPEGYL Trigger: CAGATAGCCCTCAGGGCCGCAAGGTCCTGGAGCTCC...CACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | CTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGGGGCCCCAGAGACAGTaGTGGTCCGGTGGGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LGHQPTQGWKGRSHPCTEGPQRQ*WSGGVL Trigger: AAGCACCCCACCGGACCACCACTGTCTCTGGGGCCC...CTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | CCCCTTGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGTGCAACAGGAGGTGCTaGAGCCCAGGGGTTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PLAGSPAHPGLEGPVPSVCNRRC*SPGVGG Trigger: ACCACCAACCCCTGGGCTGCAGCACCTCCTGTTGCA...CACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | CTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGTTCCCAGGGCTGGGGTaGTCTGGTCCCTGGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: LGHQPTQGWKGRSHPCTEFPGLG*SGPWMP Trigger: TGGCATCCAGGGACCAGAGCACCCCAGCCCTGGGAA...CTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | CCTTGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCAATGGCTTCCCAGGGCTaGGGTGCTCTGGTCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PCWVTSPPRAGRAGPIRAMASQG*GALVPG Trigger: TCCAGGGACCAGAGCACCCCAGCCCTGGGAAGCCAT...TGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | CCCCTTGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGTCCCAGACGATGCCCTaGCCTGGGGCAGAATTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PLAGSPAHPGLEGPVPSVSQTMP*PGAEFC Trigger: ACAGAATTCTGCCCCAGGCCAGGGCATCGTCTGGGA...CACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | ACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGCCGGGCCCCAGAGACAGTaGTGGTCCGGTGGGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: THTLASHRRHTFLPTRPAGPQRQ*WSGGVL Trigger: AAGCACCCCACCGGACCACCACTGTCTCTGGGGCCC...GGCGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| 3UTR CAA 72 bp | CCTGAAGCTGGGAGTGTGATCGTCCCTGCTCACCCCTaGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PEAGSVIVPAHP*LGHQPTQGWKG Trigger: GCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGGGGTGAGCAGGGACGATCACACTCCCAGCTTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR TCA 90 bp | CAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGGAAAGCCCCGGGCAGTaGATGGCTTCCCAGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QHTLLPLTEGTPSCPPAPESPGQ*MASQGW Trigger: CCAGCCCTGGGAAGCCATTCACTGCCCGGGGCTTTC...CGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR GCA 90 bp | TGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGGATGCCAAGCCCATCCTaGCATTCCCACACAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: WVTSPPRAGRAGPIRALRMPSPS*HSHTAT Trigger: GGTGGCTGTGTGGGAATGGCAGGATGGGCTTGGCAT...CCTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | CTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGATGCCAAGCCCATCCTaGCATTCCCACACAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: LGHQPTQGWKGRSHPCTEMPSPS*HSHTAT Trigger: GGTGGCTGTGTGGGAATGGCAGGATGGGCTTGGCAT...CTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | ACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGCCGGAGCTCCAGGACCTTaGGGCCCTGAGGGCTATCTG | + |
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Preference number: 4 (lower is better) Translates to: THTLASHRRHTFLPTRPAGAPGP*GPEGYL Trigger: CAGATAGCCCTCAGGGCCGCAAGGTCCTGGAGCTCC...GGCGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | CTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGTCCCAGACGATGCCCTaGCCTGGGGCAGAATTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LGHQPTQGWKGRSHPCTESQTMP*PGAEFC Trigger: ACAGAATTCTGCCCCAGGCCAGGGCATCGTCTGGGA...CTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | TGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGGTCCCAGACGATGCCCTaGCCTGGGGCAGAATTCTGT | + |
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Preference number: 4 (lower is better) Translates to: WVTSPPRAGRAGPIRALRSQTMP*PGAEFC Trigger: ACAGAATTCTGCCCCAGGCCAGGGCATCGTCTGGGA...CCTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGGTGGCAGTCCGGTGGGGTGCTTaGGGGGCAGGATATGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LRRVPIFQADPGADRMVAVRWGA*GAGYAG Trigger: GCCTGCATATCCTGCCCCCCAAGCACCCCACCGGAC...TGCCACCATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGCTGCAGCCCAGGGGTTaGTGGTGTTCAACCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGHQPTQGWKGRSHPCTELQPRG*WCSTLV Trigger: CACCAAGGTTGAACACCACCAACCCCTGGGCTGCAG...CTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | CCTTGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGCAGCCCAGGGGTTaGTGGTGTTCAACCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCWVTSPPRAGRAGPIRALQPRG*WCSTLV Trigger: CACCAAGGTTGAACACCACCAACCCCTGGGCTGCAG...TGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGTGGGAGAGGCTGGAGTaGAACAGGGACTGGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGHQPTQGWKGRSHPCTEWERLE*NRDWLP Trigger: AGGCAACCAGTCCCTGTTCCACTCCAGCCTCTCCCA...CTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | CAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGCCTGCAAGCGCCTGCTaGACCCTGCTGGCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QHTLLPLTEGTPSCPPAPPASAC*TLLAFG Trigger: GCCAAAGGCCAGCAGGGTCCAGCAGGCGCTTGCAGG...CGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | ACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGCCGCCCTGAGGGCTATCTaGCAGGTAGCATTGCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: THTLASHRRHTFLPTRPAALRAI*QVALPG Trigger: CCCCGGCAATGCTACCTGCCAGATAGCCCTCAGGGC...GGCGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | CTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGCATTCTGCAGGTAGTTaGGGTCCGGATAGCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGHQPTQGWKGRSHPCTEHSAGS*GPDSRG Trigger: GCCACGGCTATCCGGACCCCAACTACCTGCAGAATG...CTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CCA 90 bp | CCTTGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACATTCTGCAGGTAGTTaGGGTCCGGATAGCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PCWVTSPPRAGRAGPIRAHSAGS*GPDSRG Trigger: GCCACGGCTATCCGGACCCCAACTACCTGCAGAATG...TGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR TCA 90 bp | GGATGGTGGCAGCAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTGCAACCCCAGGAGGTGGACGGTCCTaGGGGCAGGAGCTGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GWWQQRQEAQPLGGGATPGGGRS*GQELRP Trigger: GGGCCTCAGCTCCTGCCCTCAGGACCGTCCACCTCC...TGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTGCTGCCACCATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR TCA 90 bp | ACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGCCCCTCGGTGTACTTTCTaGTCACCTGCTCCGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: THTLASHRRHTFLPTRPAPRCTF*SPAPAR Trigger: CCGAGCCGGAGCAGGTGATCAGAAAGTACACCGAGG...GGCGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR GCA 90 bp | GCTGGGAGTGTGATCGTCCCTGCTCACCCCTTGCTGGGTCACCAGCCCACCCAGTGCAACAGGAGGTGCTaGAGCCCAGGGGTTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGSVIVPAHPLLGHQPTQCNRRC*SPGVGG Trigger: ACCACCAACCCCTGGGCTGCAGCACCTCCTGTTGCA...CTGGGTGGGCTGGTGACCCAGCAAGGGGTGAGCAGGGACGATCACACTCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | CTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGGTGGCAGCCTGCAACAGGAGGTaGTGCAGCCCAGGGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRRVPIFQADPGADRMVAACNRR*CSPGVG Trigger: ACCAACCCCTGGGCTGCAGCACCTCCTGTTGCAGGC...TGCCACCATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGGGGTGGTGTTCAACCTTaGTGCAGATCTGGCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVTSPPRAGRAGPIRALRGGVQP*CRSGPR Trigger: TCTGGGGCCAGATCTGCACCAAGGTTGAACACCACC...CCTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGGGTGGTGTTCAACCTTaGTGCAGATCTGGCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGHQPTQGWKGRSHPCTEGGVQP*CRSGPR Trigger: TCTGGGGCCAGATCTGCACCAAGGTTGAACACCACC...CTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGGTCCCACAGTCTTCATaGCCTGGGAGGGACATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGHQPTQGWKGRSHPCTEVPQSS*PGRDIW Trigger: CCAAATGTCCCTCCCAGGCCATGAAGACTGTGGGAC...CTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTGCAACCCCAGTGGGCTACACAGGAGGTGGACGGTCCTaGGGGCAGGAGCTGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAQPLGGGATPVGYTGGGRS*GQELRP Trigger: GGGCCTCAGCTCCTGCCCTCAGGACCGTCCACCTCC...TGTGTAGCCCACTGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR TCA 90 bp | ACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCGGAGGTGGACGGTCCTaGGGGCAGGAGCTGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TNPTHTLASHRRHTFLPTGGGRS*GQELRP Trigger: GGGCCTCAGCTCCTGCCCTCAGGACCGTCCACCTCC...GGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | AGCTGGGAGTGTGATCGTCCCTGCTCACCCCTTGCTGGGTCACCAGCCCACCCAATGCCTGCAAGCGCCTaGTGGACCCTGCTGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SWECDRPCSPLAGSPAHPMPASA*WTLLAF Trigger: AAAGGCCAGCAGGGTCCAGCAGGCGCTTGCAGGCAT...TGGGTGGGCTGGTGACCCAGCAAGGGGTGAGCAGGGACGATCACACTCCCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 |
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| CDS-3UTR GCA 90 bp | CTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGGTGGCAATGCCTGCAAGCGCCTaGTGGACCCTGCTGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRRVPIFQADPGADRMVAMPASA*WTLLAF Trigger: AAAGGCCAGCAGGGTCCAGCAGGCGCTTGCAGGCAT...TGCCACCATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 |
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| CDS-3UTR GCA 90 bp | CAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGCCTTCTGCAAGCGCCTaGTGGACCCTGCTGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QHTLLPLTEGTPSCPPAPPSASA*WTLLAF Trigger: AAAGGCCAGCAGGGTCCAGCAGGCGCTTGCAGAAGG...CGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | CTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGCCAGTTCCGCTACCATaGAGGCACTGTTGGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGHQPTQGWKGRSHPCTEPVPLP*RHCWQK Trigger: CTTTTGCCAACAGTGCCTCCATGGTAGCGGAACTGG...CTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | TGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGGCCTGGGAGGGACATTTaGAACCTGAACACCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: WVTSPPRAGRAGPIRALRPGRDI*NLNTSI Trigger: GATGGAGGTGTTCAGGTTCCAAATGTCCCTCCCAGG...CCTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR TCA 90 bp | TGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGGCCTCAGCCTCTTAACTaGGCTGTGACTTTTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WVTSPPRAGRAGPIRALRPQPLN*AVTFRG Trigger: GCCTCTAAAAGTCACAGCTCAGTTAAGAGGCTGAGG...CCTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 |
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| CDS-3UTR GCA 90 bp | ACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGCCGGTGTTCAACCTTGGTaGAGATCTGGCCCCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: THTLASHRRHTFLPTRPAGVQPW*RSGPRQ Trigger: CTGTCTGGGGCCAGATCTGCACCAAGGTTGAACACC...GGCGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | ATGGCTTCCCAGGGCTGGGGTGCTCTGGTCCCTGGATGCCATGAGGGATGTTGTGCCTGCAACAGGAGGTaGTGCAGCCCAGGGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MASQGWGALVPGCHEGCCACNRR*CSPGVG Trigger: ACCAACCCCTGGGCTGCAGCACCTCCTGTTGCAGGC...ACAACATCCCTCATGGCATCCAGGGACCAGAGCACCCCAGCCCTGGGAAGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | AGCTGGGAGTGTGATCGTCCCTGCTCACCCCTTGCTGGGTCACCAGCCCACCCATGGGCCCGAGGGCCTTaGTGTCAGTCATGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SWECDRPCSPLAGSPAHPWARGP*CQSCHC Trigger: ACAGTGACATGACTGACAGCAAGGCCCTCGGGCCCA...TGGGTGGGCTGGTGACCCAGCAAGGGGTGAGCAGGGACGATCACACTCCCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | ACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGGGGCCCCAGAGACAGTaGTGGTCCGGTGGGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TILRRVPIFQADPGADRMGPQRQ*WSGGVL Trigger: AAGCACCCCACCGGACCACCACTGTCTCTGGGGCCC...CATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | TGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGGACAGTCTTCATGGCCTaGGAGGGACATTTGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: WVTSPPRAGRAGPIRALRTVFMA*EGHLEP Trigger: AGGTTCCAAATGTCCCTCCCAGGCCATGAAGACTGT...CCTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR TCA 90 bp | ATAGTCCCACAGTCTTCATGGCCTGGGAGGGACATTTGGAACCTGAACACCTCCGGAGGTGGACGGTCCTaGGGGCAGGAGCTGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IVPQSSWPGRDIWNLNTSGGGRS*GQELRP Trigger: GGGCCTCAGCTCCTGCCCTCAGGACCGTCCACCTCC...GGAGGTGTTCAGGTTCCAAATGTCCCTCCCAGGCCATGAAGACTGTGGGACTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125827.8 |
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| CDS-3UTR TCA 90 bp | TACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGAAAGCCCCGGGCAGTaGATGGCTTCCCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YNTEEGAHFPGRPRRRQDESPGQ*MASQGW Trigger: CCAGCCCTGGGAAGCCATTCACTGCCCGGGGCTTTC...ATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR TCA 90 bp | ACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCGAAAGCCCCGGGCAGTaGATGGCTTCCCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TNPTHTLASHRRHTFLPTESPGQ*MASQGW Trigger: CCAGCCCTGGGAAGCCATTCACTGCCCGGGGCTTTC...GGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR GCA 90 bp | CCTTGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCATGCCGGACAAAATGCTaGTCAATGAAGGAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PCWVTSPPRAGRAGPIRACRTKC*SMKEQT Trigger: TGTCTGCTCCTTCATTGAGCAGCATTTTGTCCGGCA...TGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | TCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGTCCGGTGGGGTGCTTaGGGGGCAGGATATGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STSTILRRVPIFQADPGAVRWGA*GAGYAG Trigger: GCCTGCATATCCTGCCCCCCAAGCACCCCACCGGAC...TGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | ACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCGTCCGGTGGGGTGCTTaGGGGGCAGGATATGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TNPTHTLASHRRHTFLPTVRWGA*GAGYAG Trigger: GCCTGCATATCCTGCCCCCCAAGCACCCCACCGGAC...GGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | ACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGCCCCTGGGAGGGACATTTaGAACCTGAACACCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: THTLASHRRHTFLPTRPAPGRDI*NLNTSI Trigger: GATGGAGGTGTTCAGGTTCCAAATGTCCCTCCCAGG...GGCGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CCA 90 bp | GGATGGTGGCAGCAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTGCAACCCCATCTGCAAGCGCCTGCTaGACCCTGCTGGCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GWWQQRQEAQPLGGGATPSASAC*TLLAFG Trigger: GCCAAAGGCCAGCAGGGTCCAGCAGGCGCTTGCAGA...TGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTGCTGCCACCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR TCA 90 bp | CAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTGAAAGCCCCGGGCAGTaGATGGCTTCCCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QWATQTQHTLLPLTEGTPESPGQ*MASQGW Trigger: CCAGCCCTGGGAAGCCATTCACTGCCCGGGGCTTTC...AGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR GCA 90 bp | AGGAGGAGGTGCAACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTTCCCAGGGCTGGGGTaGTCTGGTCCCTGGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRRCNPSGLHKPNTHSCLFPGLG*SGPWMP Trigger: TGGCATCCAGGGACCAGAGCACCCCAGCCCTGGGAA...GAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTGCACCTCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CCA 90 bp | CAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGCCAGTTCCGCTACCATaGAGGCACTGTTGGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHTLLPLTEGTPSCPPAPPVPLP*RHCWQK Trigger: CTTTTGCCAACAGTGCCTCCATGGTAGCGGAACTGG...CGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTGGGCCCCAGAGACAGTaGTGGTCCGGTGGGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QWATQTQHTLLPLTEGTPGPQRQ*WSGGVL Trigger: AAGCACCCCACCGGACCACCACTGTCTCTGGGGCCC...AGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGGGCCCCAGAGACAGTaGTGGTCCGGTGGGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLHKPNTHSCLSPKAHLPGPQRQ*WSGGVL Trigger: AAGCACCCCACCGGACCACCACTGTCTCTGGGGCCC...AGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | GCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCTGCAAGCGCCTGCTaGACCCTGCTGGCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ATQTQHTLLPLTEGTPSCPASAC*TLLAFG Trigger: GCCAAAGGCCAGCAGGGTCCAGCAGGCGCTTGCAGG...GCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | GCTGGGAGTGTGATCGTCCCTGCTCACCCCTTGCTGGGTCACCAGCCCACCCAGACAGTCTTCATGGCCTaGGAGGGACATTTGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSVIVPAHPLLGHQPTQTVFMA*EGHLEP Trigger: AGGTTCCAAATGTCCCTCCCAGGCCATGAAGACTGT...CTGGGTGGGCTGGTGACCCAGCAAGGGGTGAGCAGGGACGATCACACTCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | ACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCATGGCTTCCCAGGGCTaGGGTGCTCTGGTCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNPTHTLASHRRHTFLPTMASQG*GALVPG Trigger: TCCAGGGACCAGAGCACCCCAGCCCTGGGAAGCCAT...GGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | ACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACATGGCTTCCCAGGGCTaGGGTGCTCTGGTCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSTILRRVPIFQADPGADMASQG*GALVPG Trigger: TCCAGGGACCAGAGCACCCCAGCCCTGGGAAGCCAT...GTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | AGGAGGAGGTGCAACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCGCCCTGAGGGCTATCTaGCAGGTAGCATTGCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRRCNPSGLHKPNTHSCLALRAI*QVALPG Trigger: CCCCGGCAATGCTACCTGCCAGATAGCCCTCAGGGC...GAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTGCACCTCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGGTGCAACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCTTCGGTCACTCCCTaGGCAGCGAGCTCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRRCNPSGLHKPNTHSCLSSVTP*AASSAS Trigger: GCTGGCTGAGCTCGCTGCCCAGGGAGTGACCGAAGA...GAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTGCACCTCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | TACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATTCTTCGGTCACTCCCTaGGCAGCGAGCTCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YNTEEGAHFPGRPRRRQDSSVTP*AASSAS Trigger: GCTGGCTGAGCTCGCTGCCCAGGGAGTGACCGAAGA...ATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | TCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCATCTTCGGTCACTCCCTaGGCAGCGAGCTCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: STSTILRRVPIFQADPGASSVTP*AASSAS Trigger: GCTGGCTGAGCTCGCTGCCCAGGGAGTGACCGAAGA...TGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| 3UTR CAA 72 bp | CAACCCCAGTGGGCTACACAAACCCAACACACACTCTaGCCTCTCACCGAAGGCACACCTTCCTGCCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: QPQWATQTQHTL*PLTEGTPSCPP Trigger: GGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGTTAGGGTGGCATAGTTaGCAGTATAGTTATACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGHQPTQGWKGRSHPCTELGWHS*QYSYTP Trigger: TGGGGTATAACTATACTGTCAACTATGCCACCCTAA...CTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR TCA 90 bp | GGTGCAACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGACCTCGGTGTACTTTCTaGTCACCTGCTCCGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GATPVGYTNPTHTLASHRPRCTF*SPAPAR Trigger: CCGAGCCGGAGCAGGTGATCAGAAAGTACACCGAGG...TCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR TCA 90 bp | TCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCACCTCGGTGTACTTTCTaGTCACCTGCTCCGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: STSTILRRVPIFQADPGAPRCTF*SPAPAR Trigger: CCGAGCCGGAGCAGGTGATCAGAAAGTACACCGAGG...TGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR GCA 90 bp | ACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCTGCAACAGGAGGTGCTaGAGCCCAGGGGTTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TNPTHTLASHRRHTFLPTCNRRC*SPGVGG Trigger: ACCACCAACCCCTGGGCTGCAGCACCTCCTGTTGCA...GGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | TCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCATGCAACAGGAGGTGCTaGAGCCCAGGGGTTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: STSTILRRVPIFQADPGACNRRC*SPGVGG Trigger: ACCACCAACCCCTGGGCTGCAGCACCTCCTGTTGCA...TGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCTGCAACAGGAGGTaGTGCAGCCCAGGGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLHKPNTHSCLSPKAHLPACNRR*CSPGVG Trigger: ACCAACCCCTGGGCTGCAGCACCTCCTGTTGCAGGC...AGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | GTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCGCCTGCAACAGGAGGTaGTGCAGCCCAGGGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGYTNPTHTLASHRRHTFACNRR*CSPGVG Trigger: ACCAACCCCTGGGCTGCAGCACCTCCTGTTGCAGGC...GAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | ACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGTGGGCCCGAGGGCCTTaGTGTCAGTCATGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TILRRVPIFQADPGADRMWARGP*CQSCHC Trigger: ACAGTGACATGACTGACAGCAAGGCCCTCGGGCCCA...CATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR GCA 90 bp | GGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTTTCCCAGGGCTGGGGTaGTCTGGTCCCTGGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLHKPNTHSCLSPKAHLPFPGLG*SGPWMP Trigger: TGGCATCCAGGGACCAGAGCACCCCAGCCCTGGGAA...AGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR GCA 90 bp | GCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCTTCCCAGGGCTGGGGTaGTCTGGTCCCTGGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATQTQHTLLPLTEGTPSCFPGLG*SGPWMP Trigger: TGGCATCCAGGGACCAGAGCACCCCAGCCCTGGGAA...GCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR GCA 90 bp | GCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCGGAGCTCCAGGACCTTaGGGCCCTGAGGGCTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATQTQHTLLPLTEGTPSCGAPGP*GPEGYL Trigger: CAGATAGCCCTCAGGGCCGCAAGGTCCTGGAGCTCC...GCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR GCA 90 bp | CAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTGGAGCTCCAGGACCTTaGGGCCCTGAGGGCTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QWATQTQHTLLPLTEGTPGAPGP*GPEGYL Trigger: CAGATAGCCCTCAGGGCCGCAAGGTCCTGGAGCTCC...AGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR GCA 90 bp | GGTGCAACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGACCTTCTGCAAGCGCCTaGTGGACCCTGCTGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GATPVGYTNPTHTLASHRPSASA*WTLLAF Trigger: AAAGGCCAGCAGGGTCCAGCAGGCGCTTGCAGAAGG...TCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR GCA 90 bp | TCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCATCACCTGCAAGCGCCTaGTGGACCCTGCTGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: STSTILRRVPIFQADPGASPASA*WTLLAF Trigger: AAAGGCCAGCAGGGTCCAGCAGGCGCTTGCAGGTGA...TGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | AGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTGTCCGGTGGGGTGCTTaGGGGGCAGGATATGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGLHKPNTHSCLSPKAHLVRWGA*GAGYAG Trigger: GCCTGCATATCCTGCCCCCCAAGCACCCCACCGGAC...AAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CCA 90 bp | AGCTGGGAGTGTGATCGTCCCTGCTCACCCCTTGCTGGGTCACCAGCCCACCCAACAGTCTTCATGGCCTaGGAGGGACATTTGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SWECDRPCSPLAGSPAHPTVFMA*EGHLEP Trigger: AGGTTCCAAATGTCCCTCCCAGGCCATGAAGACTGT...TGGGTGGGCTGGTGACCCAGCAAGGGGTGAGCAGGGACGATCACACTCCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | GCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCGCCCTGAGGGCTATCTaGCAGGTAGCATTGCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATQTQHTLLPLTEGTPSCALRAI*QVALPG Trigger: CCCCGGCAATGCTACCTGCCAGATAGCCCTCAGGGC...GCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | GGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCTGAGGGCTATCTaGCAGGTAGCATTGCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLHKPNTHSCLSPKAHLPALRAI*QVALPG Trigger: CCCCGGCAATGCTACCTGCCAGATAGCCCTCAGGGC...AGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CCA 90 bp | CAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCTGCAAGCGCCTGCTaGACCCTGCTGGCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QWATQTQHTLLPLTEGTPSASAC*TLLAFG Trigger: GCCAAAGGCCAGCAGGGTCCAGCAGGCGCTTGCAGA...AGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR GCA 90 bp | AGCTGGGAGTGTGATCGTCCCTGCTCACCCCTTGCTGGGTCACCAGCCCACCCATGCCGGACAAAATGCTaGTCAATGAAGGAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SWECDRPCSPLAGSPAHPCRTKC*SMKEQT Trigger: TGTCTGCTCCTTCATTGAGCAGCATTTTGTCCGGCA...TGGGTGGGCTGGTGACCCAGCAAGGGGTGAGCAGGGACGATCACACTCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | ACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACCTTCCCAGTCCAAAATaGTGGCCCCTCTGCCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TSTILRRVPIFQADPGADLPSPK*WPLCRT Trigger: TGTCCGGCAGAGGGGCCAGCATTTTGGACTGGGAAG...GTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | GGATGGTGGCAGCAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTGCAACCCCAGGTGTTCAACCTTGGTaGAGATCTGGCCCCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GWWQQRQEAQPLGGGATPGVQPW*RSGPRQ Trigger: CTGTCTGGGGCCAGATCTGCACCAAGGTTGAACACC...TGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTGCTGCCACCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR GCA 90 bp | GCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCTGCAACAGGAGGTGCTaGAGCCCAGGGGTTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ATQTQHTLLPLTEGTPSCCNRRC*SPGVGG Trigger: ACCACCAACCCCTGGGCTGCAGCACCTCCTGTTGCA...GCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR GCA 90 bp | GGTGCAACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGATGGGCCCGAGGGCCTTaGTGTCAGTCATGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GATPVGYTNPTHTLASHRWARGP*CQSCHC Trigger: ACAGTGACATGACTGACAGCAAGGCCCTCGGGCCCA...TCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CCA 90 bp | TCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCATCCCAGACGATGCCCTaGCCTGGGGCAGAATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: STSTILRRVPIFQADPGASQTMP*PGAEFC Trigger: ACAGAATTCTGCCCCAGGCCAGGGCATCGTCTGGGA...TGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACCTGCAGCCCAGGGGTTaGTGGTGTTCAACCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSTILRRVPIFQADPGADLQPRG*WCSTLV Trigger: CACCAAGGTTGAACACCACCAACCCCTGGGCTGCAG...GTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGGTGCAACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTGGGAGAGGCTGGAGTaGAACAGGGACTGGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRRCNPSGLHKPNTHSCLWERLE*NRDWLP Trigger: AGGCAACCAGTCCCTGTTCCACTCCAGCCTCTCCCA...GAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTGCACCTCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCAACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGATGGGAGAGGCTGGAGTaGAACAGGGACTGGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GATPVGYTNPTHTLASHRWERLE*NRDWLP Trigger: AGGCAACCAGTCCCTGTTCCACTCCAGCCTCTCCCA...TCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTGCAACCCCAGTGGGCTACACACATTCTGCAGGTAGTTaGGGTCCGGATAGCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAQPLGGGATPVGYTHSAGS*GPDSRG Trigger: GCCACGGCTATCCGGACCCCAACTACCTGCAGAATG...TGTGTAGCCCACTGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGGTGCAACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCCATTCTGCAGGTAGTTaGGGTCCGGATAGCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRRCNPSGLHKPNTHSCLHSAGS*GPDSRG Trigger: GCCACGGCTATCCGGACCCCAACTACCTGCAGAATG...GAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTGCACCTCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR GCA 90 bp | GCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCATGCCAAGCCCATCCTaGCATTCCCACACAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ATQTQHTLLPLTEGTPSCMPSPS*HSHTAT Trigger: GGTGGCTGTGTGGGAATGGCAGGATGGGCTTGGCAT...GCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCATGCCAAGCCCATCCTaGCATTCCCACACAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VGYTNPTHTLASHRRHTFMPSPS*HSHTAT Trigger: GGTGGCTGTGTGGGAATGGCAGGATGGGCTTGGCAT...GAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTTCCCAGTCCAAAATaGTGGCCCCTCTGCCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VGYTNPTHTLASHRRHTFLPSPK*WPLCRT Trigger: TGTCCGGCAGAGGGGCCAGCATTTTGGACTGGGAAG...GAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTCTTCCCAGTCCAAAATaGTGGCCCCTCTGCCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GLHKPNTHSCLSPKAHLPLPSPK*WPLCRT Trigger: TGTCCGGCAGAGGGGCCAGCATTTTGGACTGGGAAG...AGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACGGTGTTCAACCTTGGTaGAGATCTGGCCCCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TPVGYTNPTHTLASHRRHGVQPW*RSGPRQ Trigger: CTGTCTGGGGCCAGATCTGCACCAAGGTTGAACACC...GTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | GCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCTCCCAGACGATGCCCTaGCCTGGGGCAGAATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATQTQHTLLPLTEGTPSCSQTMP*PGAEFC Trigger: ACAGAATTCTGCCCCAGGCCAGGGCATCGTCTGGGA...GCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | TACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGGTGGTGTTCAACCTTaGTGCAGATCTGGCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YNTEEGAHFPGRPRRRQDGGVQP*CRSGPR Trigger: TCTGGGGCCAGATCTGCACCAAGGTTGAACACCACC...ATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | GCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCTGCAGCCCAGGGGTTaGTGGTGTTCAACCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ATQTQHTLLPLTEGTPSCLQPRG*WCSTLV Trigger: CACCAAGGTTGAACACCACCAACCCCTGGGCTGCAG...GCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCTGGGAGAGGCTGGAGTaGAACAGGGACTGGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGYTNPTHTLASHRRHTFWERLE*NRDWLP Trigger: AGGCAACCAGTCCCTGTTCCACTCCAGCCTCTCCCA...GAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | TCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGTCCCACAGTCTTCATaGCCTGGGAGGGACATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: STSTILRRVPIFQADPGAVPQSS*PGRDIW Trigger: CCAAATGTCCCTCCCAGGCCATGAAGACTGTGGGAC...TGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CCA 90 bp | ACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACGTCCCACAGTCTTCATaGCCTGGGAGGGACATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPVGYTNPTHTLASHRRHVPQSS*PGRDIW Trigger: CCAAATGTCCCTCCCAGGCCATGAAGACTGTGGGAC...GTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR TCA 90 bp | CAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGTTAGGGTGGCATAGTTaGCAGTATAGTTATACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHTLLPLTEGTPSCPPAPLGWHS*QYSYTP Trigger: TGGGGTATAACTATACTGTCAACTATGCCACCCTAA...CGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR GCA 90 bp | ATAGTCCCACAGTCTTCATGGCCTGGGAGGGACATTTGGAACCTGAACACCTCCATGCCAAGCCCATCCTaGCATTCCCACACAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: IVPQSSWPGRDIWNLNTSMPSPS*HSHTAT Trigger: GGTGGCTGTGTGGGAATGGCAGGATGGGCTTGGCAT...GGAGGTGTTCAGGTTCCAAATGTCCCTCCCAGGCCATGAAGACTGTGGGACTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125827.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTGGTGTTCAACCTTGGTaGAGATCTGGCCCCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QWATQTQHTLLPLTEGTPGVQPW*RSGPRQ Trigger: CTGTCTGGGGCCAGATCTGCACCAAGGTTGAACACC...AGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR GCA 90 bp | GGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGGGTGTTCAACCTTGGTaGAGATCTGGCCCCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GYTNPTHTLASHRRHTFLGVQPW*RSGPRQ Trigger: CTGTCTGGGGCCAGATCTGCACCAAGGTTGAACACC...CAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACCCAGTTCCGCTACCATaGAGGCACTGTTGGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPVGYTNPTHTLASHRRHPVPLP*RHCWQK Trigger: CTTTTGCCAACAGTGCCTCCATGGTAGCGGAACTGG...GTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGGTGCAACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCCCAGTTCCGCTACCATaGAGGCACTGTTGGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRRCNPSGLHKPNTHSCLPVPLP*RHCWQK Trigger: CTTTTGCCAACAGTGCCTCCATGGTAGCGGAACTGG...GAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTGCACCTCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | GCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCGGTGGTGTTCAACCTTaGTGCAGATCTGGCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATQTQHTLLPLTEGTPSCGGVQP*CRSGPR Trigger: TCTGGGGCCAGATCTGCACCAAGGTTGAACACCACC...GCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCTGCAGCCCAGGGGTTaGTGGTGTTCAACCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGLHKPNTHSCLSPKAHLLQPRG*WCSTLV Trigger: CACCAAGGTTGAACACCACCAACCCCTGGGCTGCAG...AAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACCAAAATGCTGCTCAATaGAGGAGCAGACAGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TSTILRRVPIFQADPGADQNAAQ*RSRQWH Trigger: GTGCCACTGTCTGCTCCTTCATTGAGCAGCATTTTG...GTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR TCA 90 bp | TCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCACAAAATGCTGCTCAATaGAGGAGCAGACAGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: STSTILRRVPIFQADPGAQNAAQ*RSRQWH Trigger: GTGCCACTGTCTGCTCCTTCATTGAGCAGCATTTTG...TGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR GCA 90 bp | ACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGTGCCGGACAAAATGCTaGTCAATGAAGGAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: TILRRVPIFQADPGADRMCRTKC*SMKEQT Trigger: TGTCTGCTCCTTCATTGAGCAGCATTTTGTCCGGCA...CATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | GGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCAGTTCCGCTACCATaGAGGCACTGTTGGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GYTNPTHTLASHRRHTFLPVPLP*RHCWQK Trigger: CTTTTGCCAACAGTGCCTCCATGGTAGCGGAACTGG...CAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGATGCCATGAGGGATGTTGTAAACAATGAGTATAGTCCCACAGTCTTCGTCCGGTGGGGTGCTTaGGGGGCAGGATATGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLDAMRDVVNNEYSPTVFVRWGA*GAGYAG Trigger: GCCTGCATATCCTGCCCCCCAAGCACCCCACCGGAC...GAAGACTGTGGGACTATACTCATTGTTTACAACATCCCTCATGGCATCCAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTCCTGGGAGGGACATTTaGAACCTGAACACCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QWATQTQHTLLPLTEGTPPGRDI*NLNTSI Trigger: GATGGAGGTGTTCAGGTTCCAAATGTCCCTCCCAGG...AGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CCA 90 bp | ACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCACAGTCTTCATGGCCTaGGAGGGACATTTGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: TNPTHTLASHRRHTFLPTTVFMA*EGHLEP Trigger: AGGTTCCAAATGTCCCTCCCAGGCCATGAAGACTGT...GGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CCA 90 bp | AGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTGTCCCACAGTCTTCATaGCCTGGGAGGGACATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGLHKPNTHSCLSPKAHLVPQSS*PGRDIW Trigger: CCAAATGTCCCTCCCAGGCCATGAAGACTGTGGGAC...AAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGCTCCAGCTTAAGCTTCCACAAGTACAATACTGAGGAGGGTGCCCATTTTTCTTCGGTCACTCCCTaGGCAGCGAGCTCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSSLSFHKYNTEEGAHFSSVTP*AASSAS Trigger: GCTGGCTGAGCTCGCTGCCCAGGGAGTGACCGAAGA...AAAATGGGCACCCTCCTCAGTATTGTACTTGTGGAAGCTTAAGCTGGAGCTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR TCA 90 bp | GTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCAAAATGCTGCTCAATaGAGGAGCAGACAGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGYTNPTHTLASHRRHTFQNAAQ*RSRQWH Trigger: GTGCCACTGTCTGCTCCTTCATTGAGCAGCATTTTG...GAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTCCTCAGCCTCTTAACTaGGCTGTGACTTTTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QWATQTQHTLLPLTEGTPPQPLN*AVTFRG Trigger: GCCTCTAAAAGTCACAGCTCAGTTAAGAGGCTGAGG...AGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTGCAACCCCAGTGGGCTACACATGCCGGACAAAATGCTaGTCAATGAAGGAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAQPLGGGATPVGYTCRTKC*SMKEQT Trigger: TGTCTGCTCCTTCATTGAGCAGCATTTTGTCCGGCA...TGTGTAGCCCACTGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR GCA 90 bp | TCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCATGCCGGACAAAATGCTaGTCAATGAAGGAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: STSTILRRVPIFQADPGACRTKC*SMKEQT Trigger: TGTCTGCTCCTTCATTGAGCAGCATTTTGTCCGGCA...TGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGGGAGGGACATTTaGAACCTGAACACCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SGLHKPNTHSCLSPKAHLPGRDI*NLNTSI Trigger: GATGGAGGTGTTCAGGTTCCAAATGTCCCTCCCAGG...AAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR TCA 90 bp | AGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCAAAATGCTGCTCAATaGAGGAGCAGACAGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGLHKPNTHSCLSPKAHLQNAAQ*RSRQWH Trigger: GTGCCACTGTCTGCTCCTTCATTGAGCAGCATTTTG...AAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGCTCCAGCTTAAGCTTCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCTTCCCAGTCCAAAATaGTGGCCCCTCTGCCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GSSSLSFHKYNTEEGAHFLPSPK*WPLCRT Trigger: TGTCCGGCAGAGGGGCCAGCATTTTGGACTGGGAAG...AAAATGGGCACCCTCCTCAGTATTGTACTTGTGGAAGCTTAAGCTGGAGCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGCTCCAGCTTAAGCTTCCACAAGTACAATACTGAGGAGGGTGCCCATTTTTGGGCCCGAGGGCCTTaGTGTCAGTCATGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSSLSFHKYNTEEGAHFWARGP*CQSCHC Trigger: ACAGTGACATGACTGACAGCAAGGCCCTCGGGCCCA...AAAATGGGCACCCTCCTCAGTATTGTACTTGTGGAAGCTTAAGCTGGAGCTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR TCA 90 bp | ACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCTTAGGGTGGCATAGTTaGCAGTATAGTTATACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNPTHTLASHRRHTFLPTLGWHS*QYSYTP Trigger: TGGGGTATAACTATACTGTCAACTATGCCACCCTAA...GGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTGCAACCCCAGTGGGCTACACATTAGGGTGGCATAGTTaGCAGTATAGTTATACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRQEAQPLGGGATPVGYTLGWHS*QYSYTP Trigger: TGGGGTATAACTATACTGTCAACTATGCCACCCTAA...TGTGTAGCCCACTGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR TCA 90 bp | GGTGCAACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGATTAGGGTGGCATAGTTaGCAGTATAGTTATACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GATPVGYTNPTHTLASHRLGWHS*QYSYTP Trigger: TGGGGTATAACTATACTGTCAACTATGCCACCCTAA...TCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGTTGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGCTCCAGCTTAAGCTTCCACAAGTACAATACTGAGGAGGGTGCCCATTTTGGTGGTGTTCAACCTTaGTGCAGATCTGGCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSSSLSFHKYNTEEGAHFGGVQP*CRSGPR Trigger: TCTGGGGCCAGATCTGCACCAAGGTTGAACACCACC...AAAATGGGCACCCTCCTCAGTATTGTACTTGTGGAAGCTTAAGCTGGAGCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGCTCCAGCTTAAGCTTCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCAAAATGCTGCTCAATaGAGGAGCAGACAGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSSSLSFHKYNTEEGAHFQNAAQ*RSRQWH Trigger: GTGCCACTGTCTGCTCCTTCATTGAGCAGCATTTTG...AAAATGGGCACCCTCCTCAGTATTGTACTTGTGGAAGCTTAAGCTGGAGCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACCGTGGCCTGTCACGTaGCGGTCCATCTCGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PCWVTSPPRAGRAGPIRAPWPVT*RSISVL Trigger: CAAGACCGAGATGGACCGCAACGTGACAGGCCACGG...TGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CAA 90 bp | TGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGGGATGCCCCGGGCCACTaGCTGTTCCAGATAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: WVTSPPRAGRAGPIRALRDAPGH*LFQIVT Trigger: TGTGACTATCTGGAACAGCAAGTGGCCCGGGGCATC...CCTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGGTGGTGGTGTTCAACCTaGGTGCAGATCTGGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WVTSPPRAGRAGPIRALRWWCST*VQIWPQ Trigger: CTGGGGCCAGATCTGCACCAAGGTTGAACACCACCA...CCTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCATGGTGGTGTTCAACCTaGGTGCAGATCTGGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PCWVTSPPRAGRAGPIRAWWCST*VQIWPQ Trigger: CTGGGGCCAGATCTGCACCAAGGTTGAACACCACCA...TGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | CAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGGGACCCTGCTGGCCTTaGGCATCTGCACGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QHTLLPLTEGTPSCPPAPGPCWP*ASARAQ Trigger: CTGTGCCCGTGCAGATGCCAAAGGCCAGCAGGGTCC...CGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGGTGGCAAAGGCATGGCTGCACTaGGTGAGGCGGCCCACGACC | + |
|
Preference number: 5 (lower is better) Translates to: LRRVPIFQADPGADRMVAKAWLH*VRRPTT Trigger: GGTCGTGGGCCGCCTCACCAAGTGCAGCCATGCCTT...TGCCACCATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CAA 90 bp | ACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGCCATGGGCCCGAGGGCCTaGCTGTCAGTCATGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: THTLASHRRHTFLPTRPAMGPRA*LSVMSL Trigger: CAGTGACATGACTGACAGCAAGGCCCTCGGGCCCAT...GGCGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CAA 90 bp | CTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGCACTGAGGCCTGGGAGGGACATTaGGAACCTGAACACCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LGHQPTQGWKGRSHPCTEAWEGH*EPEHLH Trigger: ATGGAGGTGTTCAGGTTCCAAATGTCCCTCCCAGGC...CTCAGTGCACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CAA 90 bp | CCCCTTGCTGGGTCACCAGCCCACCCAGGGCTGGAAGGGCCGGTCCCATCCGTGACCATGGAGGCACTGTaGGCAAAAGCAGATAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLAGSPAHPGLEGPVPSVTMEAL*AKADKS Trigger: GGACTTATCTGCTTTTGCCAACAGTGCCTCCATGGT...CACGGATGGGACCGGCCCTTCCAGCCCTGGGTGGGCTGGTGACCCAGCAAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | CAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGGATGCCCCGGGCCACTaGCTGTTCCAGATAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: QHTLLPLTEGTPSCPPAPDAPGH*LFQIVT Trigger: TGTGACTATCTGGAACAGCAAGTGGCCCGGGGCATC...CGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS GCA 90 bp | GAGGCTGGAGTGGAACAGGGACTGGTTGCCTGCAACAGGAGGTGCTaGAGCCCAGGGGTTGGTGGTGTTCAACCTTGGTGCAGATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EAGVEQGLVACNRRC*SPGVGGVQPWCRSG Trigger: GCCAGATCTGCACCAAGGTTGAACACCACCAACCCCTGGGCTGCAGCACCTCCTGTTGCAGGCAACCAGTCCCTGTTCCACTCCAGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | TCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGGACCCTGCTGGCCTTaGGCATCTGCACGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: STSTILRRVPIFQADPGAGPCWP*ASARAQ Trigger: CTGTGCCCGTGCAGATGCCAAAGGCCAGCAGGGTCC...TGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTGCAACCCCAGTGGGCTACACAAAGGCATGGCTGCACTaGGTGAGGCGGCCCACGACC | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAQPLGGGATPVGYTKAWLH*VRRPTT Trigger: GGTCGTGGGCCGCCTCACCAAGTGCAGCCATGCCTT...TGTGTAGCCCACTGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CAA 90 bp | CAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCCGCCCCGGCCTGGGAGGGACATTaGGAACCTGAACACCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QHTLLPLTEGTPSCPPAPAWEGH*EPEHLH Trigger: ATGGAGGTGTTCAGGTTCCAAATGTCCCTCCCAGGC...CGGGGCGGGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS CCA 90 bp | ACAGGGACTGGTTGCCTGCAACAGGAGGTGCTGCAGCCCAGGGGTTaGTGGTGTTCAACCTTGGTGCAGATCTGGCCCCAGACAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TGTGCLQQEVLQPRG*WCSTLVQIWPQTVK Trigger: CTTCACTGTCTGGGGCCAGATCTGCACCAAGGTTGAACACCACCAACCCCTGGGCTGCAGCACCTCCTGTTGCAGGCAACCAGTCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | GGATGGTGGCAGCAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTGCAACCCCAGCTGCAGCCCAGGGGTaGGTGGTGTTCAACCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GWWQQRQEAQPLGGGATPAAAQG*VVFNLG Trigger: ACCAAGGTTGAACACCACCAACCCCTGGGCTGCAGC...TGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTGCTGCCACCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | ACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGGCTGCAGCCCAGGGGTaGGTGGTGTTCAACCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TILRRVPIFQADPGADRMAAAQG*VVFNLG Trigger: ACCAAGGTTGAACACCACCAACCCCTGGGCTGCAGC...CATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | ACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGATGGGCCCGAGGGCCTaGCTGTCAGTCATGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: TILRRVPIFQADPGADRMMGPRA*LSVMSL Trigger: CAGTGACATGACTGACAGCAAGGCCCTCGGGCCCAT...CATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CAA 90 bp | CAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTAAGGCATGGCTGCACTaGGTGAGGCGGCCCACGACC | + |
|
Preference number: 5 (lower is better) Translates to: QWATQTQHTLLPLTEGTPKAWLH*VRRPTT Trigger: GGTCGTGGGCCGCCTCACCAAGTGCAGCCATGCCTT...AGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CAA 90 bp | AGCTGGGAGTGTGATCGTCCCTGCTCACCCCTTGCTGGGTCACCAGCCCACCCAACCATGGAGGCACTGTaGGCAAAAGCAGATAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SWECDRPCSPLAGSPAHPTMEAL*AKADKS Trigger: GGACTTATCTGCTTTTGCCAACAGTGCCTCCATGGT...TGGGTGGGCTGGTGACCCAGCAAGGGGTGAGCAGGGACGATCACACTCCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | TCCACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGCTGCAGCCCAGGGGTaGGTGGTGTTCAACCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: STSTILRRVPIFQADPGAAAAQG*VVFNLG Trigger: ACCAAGGTTGAACACCACCAACCCCTGGGCTGCAGC...TGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACGCTGCAGCCCAGGGGTaGGTGGTGTTCAACCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TSTILRRVPIFQADPGADAAAQG*VVFNLG Trigger: ACCAAGGTTGAACACCACCAACCCCTGGGCTGCAGC...GTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCAGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACGCTGCAGCCCAGGGGTaGGTGGTGTTCAACCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TPVGYTNPTHTLASHRRHAAAQG*VVFNLG Trigger: ACCAAGGTTGAACACCACCAACCCCTGGGCTGCAGC...GTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTAAGGCATGGCTGCACTaGGTGAGGCGGCCCACGACC | + |
|
Preference number: 5 (lower is better) Translates to: SGLHKPNTHSCLSPKAHLKAWLH*VRRPTT Trigger: GGTCGTGGGCCGCCTCACCAAGTGCAGCCATGCCTT...AAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CAA 90 bp | GGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCGTGGCCTGTCACGTaGCGGTCCATCTCGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GYTNPTHTLASHRRHTFLPWPVT*RSISVL Trigger: CAAGACCGAGATGGACCGCAACGTGACAGGCCACGG...CAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CAA 90 bp | GTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCCGTGGCCTGTCACGTaGCGGTCCATCTCGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VGYTNPTHTLASHRRHTFPWPVT*RSISVL Trigger: CAAGACCGAGATGGACCGCAACGTGACAGGCCACGG...GAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CAA 90 bp | ACAAGTACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACGATGCCCCGGGCCACTaGCTGTTCCAGATAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: TSTILRRVPIFQADPGADDAPGH*LFQIVT Trigger: TGTGACTATCTGGAACAGCAAGTGGCCCGGGGCATC...GTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTACTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGCAAGAAGCCCAACCTTTAGGAGGAGGTGCAACCCCAGTGGGCTACACAGATGCCCCGGGCCACTaGCTGTTCCAGATAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: QRQEAQPLGGGATPVGYTDAPGH*LFQIVT Trigger: TGTGACTATCTGGAACAGCAAGTGGCCCGGGGCATC...TGTGTAGCCCACTGGGGTTGCACCTCCTCCTAAAGGTTGGGCTTCTTGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | ACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCCCACCTGGTGGTGTTCAACCTaGGTGCAGATCTGGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TNPTHTLASHRRHTFLPTWWCST*VQIWPQ Trigger: CTGGGGCCAGATCTGCACCAAGGTTGAACACCACCA...GGTGGGCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | GAGTATAGTCCCACAGTCTTCATGGCCTGGGAGGGACATTTGGAACCTGAACACGGACCCTGCTGGCCTTaGGCATCTGCACGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: EYSPTVFMAWEGHLEPEHGPCWP*ASARAQ Trigger: CTGTGCCCGTGCAGATGCCAAAGGCCAGCAGGGTCC...GTGTTCAGGTTCCAAATGTCCCTCCCAGGCCATGAAGACTGTGGGACTATACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCGTGGCCTGTCACGTaGCGGTCCATCTCGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGLHKPNTHSCLSPKAHLPWPVT*RSISVL Trigger: CAAGACCGAGATGGACCGCAACGTGACAGGCCACGG...AAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CAA 90 bp | GGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGTGGTGGTGTTCAACCTaGGTGCAGATCTGGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GYTNPTHTLASHRRHTFLWWCST*VQIWPQ Trigger: CTGGGGCCAGATCTGCACCAAGGTTGAACACCACCA...CAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | GCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTCCTGCTGGTGGTGTTCAACCTaGGTGCAGATCTGGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ATQTQHTLLPLTEGTPSCWWCST*VQIWPQ Trigger: CTGGGGCCAGATCTGCACCAAGGTTGAACACCACCA...GCAGGAAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | TACAATACTGAGGAGGGTGCCCATTTTCCAGGCAGACCCCGGCGCAGACAGGATGCCTGGGAGGGACATTaGGAACCTGAACACCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: YNTEEGAHFPGRPRRRQDAWEGH*EPEHLH Trigger: ATGGAGGTGTTCAGGTTCCAAATGTCCCTCCCAGGC...ATCCTGTCTGCGCCGGGGTCTGCCTGGAAAATGGGCACCCTCCTCAGTATTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
||
| CDS-3UTR CAA 90 bp | GGTAGCTCCAGCTTAAGCTTCCACAAGTACAATACTGAGGAGGGTGCCCATTTTGGACCCTGCTGGCCTTaGGCATCTGCACGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GSSSLSFHKYNTEEGAHFGPCWP*ASARAQ Trigger: CTGTGCCCGTGCAGATGCCAAAGGCCAGCAGGGTCC...AAAATGGGCACCCTCCTCAGTATTGTACTTGTGGAAGCTTAAGCTGGAGCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTGCCTGGGAGGGACATTaGGAACCTGAACACCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SGLHKPNTHSCLSPKAHLAWEGH*EPEHLH Trigger: ATGGAGGTGTTCAGGTTCCAAATGTCCCTCCCAGGC...AAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CAA 90 bp | GGTAGCTCCAGCTTAAGCTTCCACAAGTACAATACTGAGGAGGGTGCCCATTTTATGGGCCCGAGGGCCTaGCTGTCAGTCATGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: GSSSLSFHKYNTEEGAHFMGPRA*LSVMSL Trigger: CAGTGACATGACTGACAGCAAGGCCCTCGGGCCCAT...AAAATGGGCACCCTCCTCAGTATTGTACTTGTGGAAGCTTAAGCTGGAGCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 |
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| CDS-3UTR CAA 90 bp | GGTAGCTCCAGCTTAAGCTTCCACAAGTACAATACTGAGGAGGGTGCCCATTTTGATGCCCCGGGCCACTaGCTGTTCCAGATAGTCACA | + |
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Preference number: 5 (lower is better) Translates to: GSSSLSFHKYNTEEGAHFDAPGH*LFQIVT Trigger: TGTGACTATCTGGAACAGCAAGTGGCCCGGGGCATC...AAAATGGGCACCCTCCTCAGTATTGTACTTGTGGAAGCTTAAGCTGGAGCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CAA 90 bp | AGTGGGCTACACAAACCCAACACACACTCTTGCCTCTCACCGAAGGCACACCTTACCATGGAGGCACTGTaGGCAAAAGCAGATAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SGLHKPNTHSCLSPKAHLTMEAL*AKADKS Trigger: GGACTTATCTGCTTTTGCCAACAGTGCCTCCATGGT...AAGGTGTGCCTTCGGTGAGAGGCAAGAGTGTGTGTTGGGTTTGTGTAGCCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS-3UTR CAA 90 bp | GAGTATAGTCCCACAGTCTTCATGGCCTGGGAGGGACATTTGGAACCTGAACACACCATGGAGGCACTGTaGGCAAAAGCAGATAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: EYSPTVFMAWEGHLEPEHTMEAL*AKADKS Trigger: GGACTTATCTGCTTTTGCCAACAGTGCCTCCATGGT...GTGTTCAGGTTCCAAATGTCCCTCCCAGGCCATGAAGACTGTGGGACTATACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125827.8 |
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| CDS CCA 72 bp | GGTTGCCTGCAACAGGAGGTGCTGCAGCCCAGGGGTTaGTGGTGTTCAACCTTGGTGCAGATCTGGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GCLQQEVLQPRG*WCSTLVQIWPQ Trigger: CTGGGGCCAGATCTGCACCAAGGTTGAACACCACCAACCCCTGGGCTGCAGCACCTCCTGTTGCAGGCAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS GCA 72 bp | GTGGAACAGGGACTGGTTGCCTGCAACAGGAGGTGCTaGAGCCCAGGGGTTGGTGGTGTTCAACCTTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: VEQGLVACNRRC*SPGVGGVQPWC Trigger: GCACCAAGGTTGAACACCACCAACCCCTGGGCTGCAGCACCTCCTGTTGCAGGCAACCAGTCCCTGTTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS GCA 72 bp | GGAGTGGAACAGGGACTGGTTGCCTGCAACAGGAGGTaGTGCAGCCCAGGGGTTGGTGGTGTTCAACCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GVEQGLVACNRR*CSPGVGGVQPW Trigger: CCAAGGTTGAACACCACCAACCCCTGGGCTGCAGCACCTCCTGTTGCAGGCAACCAGTCCCTGTTCCACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS CAA 90 bp | GTAGCGGCCCGACACAGGGCCAGTTCCGCTACCATGGAGGCACTGTaGGCAAAAGCAGATAAGTCCCATTTGGCGTGGAACAGCGATGTC | + |
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Preference number: 6 (lower is better) Translates to: VAARHRASSATMEAL*AKADKSHLAWNSDV Trigger: GACATCGCTGTTCCACGCCAAATGGGACTTATCTGCTTTTGCCAACAGTGCCTCCATGGTAGCGGAACTGGCCCTGTGTCGGGCCGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS CAA 72 bp | GAGGTGCTGCAGCCCAGGGGTTGGTGGTGTTCAACCTaGGTGCAGATCTGGCCCCAGACAGTGAAGGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: EVLQPRGWWCST*VQIWPQTVKVY Trigger: ATAAACCTTCACTGTCTGGGGCCAGATCTGCACCAAGGTTGAACACCACCAACCCCTGGGCTGCAGCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS TCA 72 bp | GCAGATAAGTCCCATTTGGCGTGGAACAGCGATGTCTaGAGTCACTGGGTAAACTGGCCCCACTTGGCGTCG | + |
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Preference number: 6 (lower is better) Translates to: ADKSHLAWNSDV*SHWVNWPHLAS Trigger: CGACGCCAAGTGGGGCCAGTTTACCCAGTGACTTCAGACATCGCTGTTCCACGCCAAATGGGACTTATCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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| CDS CCA 72 bp | GACACAGGGCCAGTTCCGCTACCATGGAGGCACTGTTaGCAAAAGCAGATAAGTCCCATTTGGCGTGGAACA | + |
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Preference number: 6 (lower is better) Translates to: DTGPVPLPWRHC*QKQISPIWRGT Trigger: TGTTCCACGCCAAATGGGACTTATCTGCTTTTGCCAACAGTGCCTCCATGGTAGCGGAACTGGCCCTGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005072.10 ENSMUST00000111142.9 ENSMUST00000111144.8 ENSMUST00000111145.10 ENSMUST00000125827.8 |
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