Pregenerated sensors for DTX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029603Ensembl transcript IDs: ENSMUST00000031607.7
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACTTCCATCCCAGCAGCCAATCCTCAGAGGCGGAGCTGGTGAGTTaGCTGGGCAACGGGCCTCTGGTTGGCCTGAGACGATCAGCCGCC | + |
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Preference number: 1 (lower is better) Translates to: DFHPSSQSSEAELVS*LGNGPLVGLRRSAA Trigger: GGCGGCTGATCGTCTCAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCCGCCTCTGAGGATTGGCTGCTGGGATGGAAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR TCA 90 bp | TCTCCCCAAGCTGGGAGAAGTGGAGAGGCACGTGGTGTACGTGCGTaGGTGCGTGCGTGCAACAGGACACGTGTGCGTTTGTGTGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: SPQAGRSGEARGVRA*VRACNRTRVRLCVV Trigger: CACCACACACAAACGCACACGTGTCCTGTTGCACGCACGCACTCACGCACGTACACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR CCA 90 bp | TGTCATGGGGGCCTTTCTGTCTCTTTCTCCCCAAGCTGGGAGAAGTaGAGAGGCACGTGGTGTACGTGCGTGAGTGCGTGCGTGCAACAG | + |
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Preference number: 1 (lower is better) Translates to: CHGGLSVSFSPSWEK*RGTWCTCVSACVQQ Trigger: CTGTTGCACGCACGCACTCACGCACGTACACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGAGAAAGAGACAGAAAGGCCCCCATGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR CCA 90 bp | TATACAGATGTAATGGAGACACAGGTATTTCCACAGGACATGTCATaGGGGCCTTTCTGTCTCTTTCTCCCCAAGCTGGGAGAAGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: YTDVMETQVFPQDMS*GPFCLFLPKLGEVE Trigger: CTCCACTTCTCCCAGCTTGGGGAGAAAGAGACAGAAAGGCCCCCATGACATGTCCTGTGGAAATACCTGTGTCTCCATTACATCTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTGGTGAGTTGCCTGGGCAACGGGCCTCTGGTTGGCCTGAGACGATCAGCCGTGGTGTACGTGCGTaGGTGCGTGCGTGCAACAGG | + |
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Preference number: 2 (lower is better) Translates to: GAGELPGQRASGWPETISRGVRA*VRACNR Trigger: CCTGTTGCACGCACGCACTCACGCACGTACACCACG...GCTGATCGTCTCAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTGGTGAGTTGCCTGGGCAACGGGCCTCTGGTTGGCCTGAGACGATCAGCCCAAGCTGGGAGAAGTaGAGAGGCACGTGGTGTACG | + |
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Preference number: 2 (lower is better) Translates to: GAGELPGQRASGWPETISPSWEK*RGTWCT Trigger: CGTACACCACGTGCCTCTCCACTTCTCCCAGCTTGG...GCTGATCGTCTCAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTCTCCCCAAGCTGGGAGAAGTGGAGAGGCACGTGGTGTACGTGCGTGAGCAGGTTGGAGCCAGCTaGCCTGGTGGACTCCCATCA | + |
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Preference number: 2 (lower is better) Translates to: LFLPKLGEVERHVVYVREQVGAS*PGGLPS Trigger: TGATGGGAGTCCACCAGGCCAGCTGGCTCCAACCTG...CTCACGCACGTACACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGAGAAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR-3UTR CCA 90 bp | TTTCTACCCCATTGGCTTTGCAGTGCTCAGTGGGCAGGTGGCAGCGCTGACGTGTCTTTCTCCCCAAGCTaGGAGAAGTGGAGAGGCACG | + |
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Preference number: 2 (lower is better) Translates to: FLPHWLCSAQWAGGSADVSFSPS*EKWRGT Trigger: CGTGCCTCTCCACTTCTCCCAGCTTGGGGAGAAAGA...CACGTCAGCGCTGCCACCTGCCCACTGAGCACTGCAAAGCCAATGGGGTAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR-3UTR TCA 90 bp | AGGACGATGTCTTTGCCTGGGATAGACAGAGGTCAAGAGATGGACACAGGAAGACGTGGGTTAAGGGGTTaGGGCCCAGGGGCAGAGCGA | + |
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Preference number: 2 (lower is better) Translates to: RTMSLPGIDRGQEMDTGRRGLRG*GPGAER Trigger: TCGCTCTGCCCCTGGGCCTCAACCCCTTAACCCACG...TCTTCCTGTGTCCATCTCTTGACCTCTGTCTATCCCAGGCAAAGACATCGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR-3UTR CCA 90 bp | CGTGCAACAGGACACGTGTGCGTTTGTGTGTGGTGTGAAGGGCAAAGCGCCATCAGTCGCCCTTGCTGGTaGTCCTATCTCTGCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: RATGHVCVCVWCEGQSAISRPCW*SYLCCS Trigger: AGAGCAGCAGAGATAGGACCACCAGCAAGGGCGACT...GATGGCGCTTTGCCCTTCACACCACACACAAACGCACACGTGTCCTGTTGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR-3UTR GCA 90 bp | CCAGAAGTGGGTCTCAAATGTCCGGAGCGGTTTAGTGGGGGAGAAGCCGGTACAGCAACAGGACACGTGTaGGTTTGTGTGTGGTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: PEVGLKCPERFSGGEAGTATGHV*VCVWCE Trigger: TTCACACCACACACAAACGCACACGTGTCCTGTTGC...TGTACCGGCTTCTCCCCCACTAAACCGCTCCGGACATTTGAGACCCACTTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGTATTTCCACAGGACATGTCATGGGGGCCTTTCTGTCTCTTTCTCCCCAAGGTGTACGTGCGTGAGTaGGTGCGTGCAACAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: QVFPQDMSWGPFCLFLPKVYVRE*VRATGH Trigger: GTGTCCTGTTGCACGCACGCACTCACGCACGTACAC...CTTGGGGAGAAAGAGACAGAAAGGCCCCCATGACATGTCCTGTGGAAATACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR CAA 90 bp | CGGTTTAGTGGGGGAGAAGCCGGTACAGAGGCAAGGACGATGTCTTaGCCTGGGATAGACAGAGGTCAAGAGATGGACACAGGAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: RFSGGEAGTEARTMS*PGIDRGQEMDTGRR Trigger: TCTTCTTCCTGTGTCCATCTCTTGACCTCTGTCTATCCCAGGCAAAGACATCGTCCTTGCCTCTGTACCGGCTTCTCCCCCACTAAACCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR-3UTR TCA 90 bp | CTACTTAATAACCTGGGGTTTCTACCCCATTGGCTTTGCAGTGCTCAGTGGGCACGTTTGTGTGTGGTGTaGAGGGCAAAGCGCCATCGT | + |
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Preference number: 2 (lower is better) Translates to: LLNNLGFLPHWLCSAQWARLCVV*RAKRHR Trigger: ACGATGGCGCTTTGCCCTTCACACCACACACAAACG...TGCCCACTGAGCACTGCAAAGCCAATGGGGTAGAAACCCCAGGTTATTAAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR-3UTR CAA 90 bp | TCCTCAGAGGCGGAGCTGGTGAGTTGCCTGGGCAACGGGCCTCTGGTTGGCCTGACGTGGGTTAAGGGGTaGAGGCCCAGGGGCAGAGCG | + |
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Preference number: 3 (lower is better) Translates to: SSEAELVSCLGNGPLVGLTWVKG*RPRGRA Trigger: CGCTCTGCCCCTGGGCCTCAACCCCTTAACCCACGT...CAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCCGCCTCTGAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR GCA 72 bp | CCCAGCAGCCAATCCTCAGAGGCGGAGCTGGTGAGTTaGCTGGGCAACGGGCCTCTGGTTGGCCTGAGACGA | + |
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Preference number: 3 (lower is better) Translates to: PSSQSSEAELVS*LGNGPLVGLRR Trigger: TCGTCTCAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCCGCCTCTGAGGATTGGCTGCTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR CCA 72 bp | TTTGCAGTGCTCAGTGGGCAGGTGGCAGCGCTGACGTaGGTTAAGGGGTTGAGGCCCAGGGGCAGAGCGACC | + |
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Preference number: 3 (lower is better) Translates to: FAVLSGQVAALT*VKGLRPRGRAT Trigger: GGTCGCTCTGCCCCTGGGCCTCAACCCCTTAACCCACGTCAGCGCTGCCACCTGCCCACTGAGCACTGCAAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR-3UTR CAA 90 bp | CGTGCAACAGGACACGTGTGCGTTTGTGTGTGGTGTGAAGGGCAAAGCGCCATCGCCGGAAGCCACAGGTaGGAGCCAGCTGGCCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: RATGHVCVCVWCEGQSAIAGSHR*EPAGLV Trigger: CACCAGGCCAGCTGGCTCCAACCTGTGGCTTCCGGC...GATGGCGCTTTGCCCTTCACACCACACACAAACGCACACGTGTCCTGTTGCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR GCA 72 bp | AGTCGCCCTTGCTGGTGGTCCTATCTCTGCTGCTCTTaGCGGAAGCCACAGGTTGGAGCCAGCTGGCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: SRPCWWSYLCCS*RKPQVGASWPG Trigger: ACCAGGCCAGCTGGCTCCAACCTGTGGCTTCCGGCAAGAGCAGCAGAGATAGGACCACCAGCAAGGGCGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR CCA 72 bp | GGCCTTTCTGTCTCTTTCTCCCCAAGCTGGGAGAAGTaGAGAGGCACGTGGTGTACGTGCGTGAGTGCGTGC | + |
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Preference number: 3 (lower is better) Translates to: GLSVSFSPSWEK*RGTWCTCVSAC Trigger: GCACGCACTCACGCACGTACACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGAGAAAGAGACAGAAAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR TCA 72 bp | GTGTATAGCCTGAACAAGGCCTCCTCCCCTCGCTCCTaGAGCCAGAAGTGGGTCTCAAATGTCCGGAGCGGT | + |
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Preference number: 3 (lower is better) Translates to: VYSLNKASSPRS*SQKWVSNVRSG Trigger: ACCGCTCCGGACATTTGAGACCCACTTCTGGCTTCAGGAGCGAGGGGAGGAGGCCTTGTTCAGGCTATACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR GCA 72 bp | TACGTGCGTGAGTGCGTGCGTGCAACAGGACACGTGTaGGTTTGTGTGTGGTGTGAAGGGCAAAGCGCCATC | + |
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Preference number: 3 (lower is better) Translates to: YVRECVRATGHV*VCVWCEGQSAI Trigger: GATGGCGCTTTGCCCTTCACACCACACACAAACGCACACGTGTCCTGTTGCACGCACGCACTCACGCACGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR GCA 72 bp | AAGTGGAGAGGCACGTGGTGTACGTGCGTGAGTGCGTaGGTGCAACAGGACACGTGTGCGTTTGTGTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: KWRGTWCTCVSA*VQQDTCAFVCG Trigger: ACCACACACAAACGCACACGTGTCCTGTTGCACGCACGCACTCACGCACGTACACCACGTGCCTCTCCACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR CCA 72 bp | AGAAGCCGGTACAGAGGCAAGGACGATGTCTTTGCCTaGGATAGACAGAGGTCAAGAGATGGACACAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: RSRYRGKDDVFA*DRQRSRDGHRK Trigger: CTTCCTGTGTCCATCTCTTGACCTCTGTCTATCCCAGGCAAAGACATCGTCCTTGCCTCTGTACCGGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR CCA 72 bp | GTAATGGAGACACAGGTATTTCCACAGGACATGTCATaGGGGCCTTTCTGTCTCTTTCTCCCCAAGCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: VMETQVFPQDMS*GPFCLFLPKLG Trigger: TCCCAGCTTGGGGAGAAAGAGACAGAAAGGCCCCCATGACATGTCCTGTGGAAATACCTGTGTCTCCATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | GGAGCTGGTGAGTTGCCTGGGCAACGGGCCTCTGGTTGGCCTGAGACGATCAGCAGGCCAGGATGGCGTTaGAGGCGGCGCGCGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GAGELPGQRASGWPETISRPGWR*RRRACC Trigger: ACAGCACGCGCGCCGCCTCCAACGCCATCCTGGCCT...GCTGATCGTCTCAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | TCCTCAGAGGCGGAGCTGGTGAGTTGCCTGGGCAACGGGCCTCTGGTTGGCCTGGCCTCAGAAACCCCCTaGGCGGTGAGCTCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSEAELVSCLGNGPLVGLASETP*AVSSAS Trigger: GCTGGCTGAGCTCACCGCCCAGGGGGTTTCTGAGGC...CAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCCGCCTCTGAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | CTGGTGAGTTGCCTGGGCAACGGGCCTCTGGTTGGCCTGAGACGATCAGCCGCCCCCACGGGCCAGGATTaGGACTTGGGAATGGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: LVSCLGNGPLVGLRRSAAPTGQD*DLGMEP Trigger: CGGCTCCATTCCCAAGTCGCAATCCTGGCCCGTGGG...GGCGGCTGATCGTCTCAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR CAA 72 bp | TCCCAGCAGCCAATCCTCAGAGGCGGAGCTGGTGAGTaGCCTGGGCAACGGGCCTCTGGTTGGCCTGAGACG | + |
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Preference number: 4 (lower is better) Translates to: SQQPILRGGAGE*PGQRASGWPET Trigger: CGTCTCAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCCGCCTCTGAGGATTGGCTGCTGGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | TCCTCAGAGGCGGAGCTGGTGAGTTGCCTGGGCAACGGGCCTCTGGTTGGCCTGAGGTCGAGCCACGGGTaGTGCTTCTCGTACGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: SSEAELVSCLGNGPLVGLRSSHG*CFSYAF Trigger: GAACGCGTACGAGAAGCAGCACCCGTGGCTCGACCT...CAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCCGCCTCTGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | CGTGCAACAGGACACGTGTGCGTTTGTGTGTGGTGTGAAGGGCAAAGCGCCATCGCTGCGAGGCCAGGATaGCGTTGGAGGCGGCGCGCG | + |
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Preference number: 4 (lower is better) Translates to: RATGHVCVCVWCEGQSAIAARPG*RWRRRA Trigger: CGCGCGCCGCCTCCAACGCCATCCTGGCCTCGCAGC...GATGGCGCTTTGCCCTTCACACCACACACAAACGCACACGTGTCCTGTTGCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | TCCTCAGAGGCGGAGCTGGTGAGTTGCCTGGGCAACGGGCCTCTGGTTGGCCTGCGTTGTCTAGGTAGCTaGCGTCGGGGTAGCCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: SSEAELVSCLGNGPLVGLRCLGS*RRGSRD Trigger: GTCACGGCTACCCCGACGCCAGCTACCTAGACAACG...CAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCCGCCTCTGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR CAA 72 bp | GGTCCTATCTCTGCTGCTCTTGCCGGAAGCCACAGGTaGGAGCCAGCTGGCCTGGTGGACTCCCATCACCCC | + |
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Preference number: 4 (lower is better) Translates to: GPISAALAGSHR*EPAGLVDSHHP Trigger: GGGGTGATGGGAGTCCACCAGGCCAGCTGGCTCCAACCTGTGGCTTCCGGCAAGAGCAGCAGAGATAGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | GTGGTCCTATCTCTGCTGCTCTTGCCGGAAGCCACAGGTTGGAGCCAGCTGGCCGATCCCGGTCATCCCTaGCAAGGCTGGGTGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: VVLSLLLLPEATGWSQLADPGHP*QGWVDR Trigger: CCTGTCCACCCAGCCTTGGCAGGGATGACCGGGATC...GGCCAGCTGGCTCCAACCTGTGGCTTCCGGCAAGAGCAGCAGAGATAGGACCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTCCCCAAGCTGGGAGAAGTGGAGAGGCACGTGGTGTACGTGCGTGAGCCCACACCACCACCCTaGCCACGTTCTGCGGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: LFLPKLGEVERHVVYVREPTPPP*PRSAAG Trigger: TCCCGCCGCAGAACGTGGCCAGGGTGGTGGTGTGGG...CTCACGCACGTACACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGAGAAAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR TCA 90 bp | CCAGAAGTGGGTCTCAAATGTCCGGAGCGGTTTAGTGGGGGAGAAGCCGGTACACGGCGCGCGTGCTGTTaGCCAGCAGGCACTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: PEVGLKCPERFSGGEAGTRRACC*PAGTAD Trigger: GTCAGCAGTGCCTGCTGGTCAACAGCACGCGCGCCG...TGTACCGGCTTCTCCCCCACTAAACCGCTCCGGACATTTGAGACCCACTTCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | GGGCCTTTCTGTCTCTTTCTCCCCAAGCTGGGAGAAGTGGAGAGGCACGTGGTGCCCACACGATGCCCTTaGCCGGCGCCGACGATGGAT | + |
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Preference number: 4 (lower is better) Translates to: GPFCLFLPKLGEVERHVVPTRCP*PAPTMD Trigger: ATCCATCGTCGGCGCCGGGCAAGGGCATCGTGTGGG...CACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGAGAAAGAGACAGAAAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | GGAGCTGGTGAGTTGCCTGGGCAACGGGCCTCTGGTTGGCCTGAGACGATCAGCGCTGGTGGACCTCTGTaGTCCTGGTCGACTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: GAGELPGQRASGWPETISAGGPL*SWSTEV Trigger: AACCTCAGTCGACCAGGACCACAGAGGTCCACCAGC...GCTGATCGTCTCAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR TCA 90 bp | GTCATGGGGGCCTTTCTGTCTCTTTCTCCCCAAGCTGGGAGAAGTGGAGAGGCAGCAGAAGCCGAGCGATaGGAGGTCGAGCCACGGGTG | + |
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Preference number: 4 (lower is better) Translates to: VMGAFLSLSPQAGRSGEAAEAER*EVEPRV Trigger: CACCCGTGGCTCGACCTCTCATCGCTCGGCTTCTGC...TGCCTCTCCACTTCTCCCAGCTTGGGGAGAAAGAGACAGAAAGGCCCCCATGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR TCA 90 bp | CCGAGAGCGGAGGGAGGCATGTGCCAGGCTAGAGGCAAGGCAAAAGGGAAGGCGCATAGCCAGATGCTGTaGCCAGCCGCTCCATGCAAA | + |
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Preference number: 4 (lower is better) Translates to: PRAEGGMCQARGKAKGKAHSQML*PAAPCK Trigger: TTTGCATGGAGCGGCTGGTCACAGCATCTGGCTATG...CGCCTTCCCTTTTGCCTTGCCTCTAGCCTGGCACATGCCTCCCTCCGCTCTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | TCCTCCCGCCGAGAGCGGAGGGAGGCATGTGCCAGGCTAGAGGCAAGGCAAAAGGATCGTCTGGGTGTCTaGAAAACCAGGCAGCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: SSRRERREACARLEARQKDRLGV*KTRQRV Trigger: CACTCGCTGCCTGGTTTTGCAGACACCCAGACGATC...CTTTTGCCTTGCCTCTAGCCTGGCACATGCCTCCCTCCGCTCTCGGCGGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | TCCTCAGAGGCGGAGCTGGTGAGTTGCCTGGGCAACGGGCCTCTGGTTGGCCTGGGACCTCTGTGGTCCTaGTCGACTGAGGTTGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: SSEAELVSCLGNGPLVGLGPLWS*STEVVL Trigger: CAAAACAACCTCAGTCGACCAGGACCACAGAGGTCC...CAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCCGCCTCTGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR TCA 90 bp | TCCTCCCGCCGAGAGCGGAGGGAGGCATGTGCCAGGCTAGAGGCAAGGCAAAAGACGCGTTCTGGATGGTaGTGCAGATGTCCATGTCGT | + |
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Preference number: 4 (lower is better) Translates to: SSRRERREACARLEARQKTRSGW*CRCPCR Trigger: ACGACATGGACATCTGCATCACCATCCAGAACGCGT...CTTTTGCCTTGCCTCTAGCCTGGCACATGCCTCCCTCCGCTCTCGGCGGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | TCCCCAAGCTGGGAGAAGTGGAGAGGCACGTGGTGTACGTGCGTGAGTGCGTGCACGATGCGGATCGTCTaGGTGTCTGCAAAACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SPSWEKWRGTWCTCVSACTMRIV*VSAKPG Trigger: GCCTGGTTTTGCAGACACCCAGACGATCCGCATCGT...GCACGCACTCACGCACGTACACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | CTACTTAATAACCTGGGGTTTCTACCCCATTGGCTTTGCAGTGCTCAGTGGGCAACCCTGGCCACGTTCTaGGGCGGGAAGCCCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LLNNLGFLPHWLCSAQWATLATF*GGKPSP Trigger: CGGGCTGGGCTTCCCGCCGCAGAACGTGGCCAGGGT...TGCCCACTGAGCACTGCAAAGCCAATGGGGTAGAAACCCCAGGTTATTAAGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | TTTCTACCCCATTGGCTTTGCAGTGCTCAGTGGGCAGGTGGCAGCGCTGACGTGCCCCGTAGATGGCTTTaGAGGTTGGACACTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: FLPHWLCSAQWAGGSADVPRRWL*RLDTAG Trigger: GCCTGCAGTGTCCAACCTGCAAAGCCATCTACGGGG...CACGTCAGCGCTGCCACCTGCCCACTGAGCACTGCAAAGCCAATGGGGTAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | TCCCCAAGCTGGGAGAAGTGGAGAGGCACGTGGTGTACGTGCGTGAGTGCGTGCGGATGTCATAGACGATaGGGATCGTCTGGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPSWEKWRGTWCTCVSACGCHRR*GSSGCL Trigger: CAGACACCCAGACGATCCGCATCGTCTATGACATCC...GCACGCACTCACGCACGTACACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | TTTTCCATAGGGAAGTCGCCCTTGCTGGTGGTCCTATCTCTGCTGCTCTTGCCGGCCCGGCGCCGACGATaGATCGTAGAAGTTGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FSIGKSPLLVVLSLLLLPARRRR*IVEVAS Trigger: CGACGCAACTTCTACGATCCATCGTCGGCGCCGGGC...CGGCAAGAGCAGCAGAGATAGGACCACCAGCAAGGGCGACTTCCCTATGGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | GTGTGGTGTGAAGGGCAAAGCGCCATCGTTTTCCATAGGGAAGTCGCCCTTGCTCCTGCCAAGGCTGGGTaGACAGGGCCAGTGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VWCEGQSAIVFHREVALAPAKAG*TGPVPF Trigger: GAATGGCACTGGCCCTGTCCACCCAGCCTTGGCAGG...AGCAAGGGCGACTTCCCTATGGAAAACGATGGCGCTTTGCCCTTCACACCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | CTACTTAATAACCTGGGGTTTCTACCCCATTGGCTTTGCAGTGCTCAGTGGGCACCCATTCCCACACGATaGCCTTGCCCGGCGCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: LLNNLGFLPHWLCSAQWAPIPTR*PCPAPT Trigger: CGTCGGCGCCGGGCAAGGGCATCGTGTGGGAATGGG...TGCCCACTGAGCACTGCAAAGCCAATGGGGTAGAAACCCCAGGTTATTAAGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | GGGCCTTTCTGTCTCTTTCTCCCCAAGCTGGGAGAAGTGGAGAGGCACGTGGTGGGTGGACAGGGCCAGTaGCATTCAAGTTCTTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GPFCLFLPKLGEVERHVVGGQGQ*HSSSSR Trigger: CCGTGAAGAACTTGAATGGCACTGGCCCTGTCCACC...CACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGAGAAAGAGACAGAAAGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | GTGTGCGTTTGTGTGTGGTGTGAAGGGCAAAGCGCCATCGTTTTCCATAGGGAATGTGGTGGCACACGGTaGCCGTGTAGGGTCGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVWCEGQSAIVFHRECGGTR*PCRVAS Trigger: GCTGGCGACCCTACACGGCCACCGTGTGCCACCACA...TTCCCTATGGAAAACGATGGCGCTTTGCCCTTCACACCACACACAAACGCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTCCCCAAGCTGGGAGAAGTGGAGAGGCACGTGGTGTACGTGCGTGAGGATGGCTTTGCAGGTTaGACACTGCAGGCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LFLPKLGEVERHVVYVREDGFAG*TLQAAI Trigger: GATGGCAGCCTGCAGTGTCCAACCTGCAAAGCCATC...CTCACGCACGTACACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGAGAAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | GGGCCTTTCTGTCTCTTTCTCCCCAAGCTGGGAGAAGTGGAGAGGCACGTGGTGACTTCTTGCCTGGGTTaGGATGTTCAGGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPFCLFLPKLGEVERHVVTSCLG*DVQGPG Trigger: TCCAGGGCCCTGAACATCCCAACCCAGGCAAGAAGT...CACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGAGAAAGAGACAGAAAGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | CAGGTATTTCCACAGGACATGTCATGGGGGCCTTTCTGTCTCTTTCTCCCCAAGGGTCGCCAGCGGCTGTaGTCATTGAGCCACTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVFPQDMSWGPFCLFLPKGRQRL*SLSHSH Trigger: GTGGGAGTGGCTCAATGAGCACAGCCGCTGGCGACC...CTTGGGGAGAAAGAGACAGAAAGGCCCCCATGACATGTCCTGTGGAAATACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
||
| CDS-3UTR GCA 90 bp | GATGTAATGGAGACACAGGTATTTCCACAGGACATGTCATGGGGGCCTTTCTGTGGAGCCTTGCGGCGCTaGGAGGCCAGGATGGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DVMETQVFPQDMSWGPFCGALRR*EARMAL Trigger: CAACGCCATCCTGGCCTCGCAGCGCCGCAAGGCTCC...ACAGAAAGGCCCCCATGACATGTCCTGTGGAAATACCTGTGTCTCCATTACATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | CTCTTTCTCCCCAAGCTGGGAGAAGTGGAGAGGCACGTGGTGTACGTGCGTGAGGGCTGCCATCCTTGTTaGCATTGGAGTACATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLPKLGEVERHVVYVREGCHPC*HWSTWP Trigger: TGGCCATGTACTCCAATGGCAACAAGGATGGCAGCC...CTCACGCACGTACACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGAGAAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
||
| CDS-3UTR GCA 90 bp | GTGTGGTGTGAAGGGCAAAGCGCCATCGTTTTCCATAGGGAAGTCGCCCTTGCTGTTCAGGGCCCTGGATaGCCGTGGGGATGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VWCEGQSAIVFHREVALAVQGPG*PWGCHR Trigger: TCTATGACATCCCCACGGGCATCCAGGGCCCTGAAC...AGCAAGGGCGACTTCCCTATGGAAAACGATGGCGCTTTGCCCTTCACACCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
||
| CDS-3UTR CCA 90 bp | CTACTTAATAACCTGGGGTTTCTACCCCATTGGCTTTGCAGTGCTCAGTGGGCAAGGGCTGACCCGAGCTaGCTCCCACGGGCCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LLNNLGFLPHWLCSAQWARADPS*LPRARI Trigger: AATCCTGGCCCGTGGGAGCCAGCTCGGGTCAGCCCT...TGCCCACTGAGCACTGCAAAGCCAATGGGGTAGAAACCCCAGGTTATTAAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| 3UTR CAA 72 bp | GGCAAAGCGCCATCGTTTTCCATAGGGAAGTCGCCCTaGCTGGTGGTCCTATCTCTGCTGCTCTTGCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKAPSFSIGKSP*LVVLSLLLLPE Trigger: TTCCGGCAAGAGCAGCAGAGATAGGACCACCAGCAAGGGCGACTTCCCTATGGAAAACGATGGCGCTTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | CCAGAAGTGGGTCTCAAATGTCCGGAGCGGTTTAGTGGGGGAGAAGCCGGTACACATCCTTGTTGCCATTaGAGTACATGGCCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PEVGLKCPERFSGGEAGTHPCCH*STWPPG Trigger: GCCTGGTGGCCATGTACTCCAATGGCAACAAGGATG...TGTACCGGCTTCTCCCCCACTAAACCGCTCCGGACATTTGAGACCCACTTCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | TGTGCGTTTGTGTGTGGTGTGAAGGGCAAAGCGCCATCGTTTTCCATAGGGAAGGGCCCTGGATGCCCGTaGGGATGTCATAGACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: CAFVCGVKGKAPSFSIGKGPGCP*GCHRRC Trigger: GCATCGTCTATGACATCCCCACGGGCATCCAGGGCC...CTTCCCTATGGAAAACGATGGCGCTTTGCCCTTCACACCACACACAAACGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR TCA 90 bp | GTGTGCGTTTGTGTGTGGTGTGAAGGGCAAAGCGCCATCGTTTTCCATAGGGAAGCAGCGAGTGCGGGATaGGGTGAAACTCCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVWCEGQSAIVFHREAASAG*GETPSS Trigger: GGAAGATGGAGTTTCACCTCATCCCGCACTCGCTGC...TTCCCTATGGAAAACGATGGCGCTTTGCCCTTCACACCACACACAAACGCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR TCA 90 bp | TGTGCGTTTGTGTGTGGTGTGAAGGGCAAAGCGCCATCGTTTTCCATAGGGAAGGGAAGCCTCTGGCTGTaGACTTCTTGCCTGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CAFVCGVKGKAPSFSIGKGSLWL*TSCLGW Trigger: CCAACCCAGGCAAGAAGTTCACAGCCAGAGGCTTCC...CTTCCCTATGGAAAACGATGGCGCTTTGCCCTTCACACCACACACAAACGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | TGTGCGTTTGTGTGTGGTGTGAAGGGCAAAGCGCCATCGTTTTCCATAGGGAAGATGGATCGTAGAAGTTaGGTCGCACCGGCCGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: CAFVCGVKGKAPSFSIGKMDRRS*VAPAAW Trigger: CCATGCGGCCGGTGCGACGCAACTTCTACGATCCAT...CTTCCCTATGGAAAACGATGGCGCTTTGCCCTTCACACCACACACAAACGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | GTGTGGTGTGAAGGGCAAAGCGCCATCGTTTTCCATAGGGAAGTCGCCCTTGCTGCTTCACGTCGCTTTTaGTTACTGGTGGTGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VWCEGQSAIVFHREVALAASRRF*LLVVGA Trigger: TGCACCCACCACCAGTAAGCAAAAGCGACGTGAAGC...AGCAAGGGCGACTTCCCTATGGAAAACGATGGCGCTTTGCCCTTCACACCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | CTCTTTCTCCCCAAGCTGGGAGAAGTGGAGAGGCACGTGGTGTACGTGCGTGAGGGGTTTTTCACCTTCTaGATGTACCTCCGAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: LFLPKLGEVERHVVYVREGFFTF*MYLRTT Trigger: TGTGGTTCGGAGGTACATGCAGAAGGTGAAAAACCC...CTCACGCACGTACACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGAGAAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | TTTTCCATAGGGAAGTCGCCCTTGCTGGTGGTCCTATCTCTGCTGCTCTTGCCGTTTGCTTACTGGTGGTaGGTGCAGGATGGGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSIGKSPLLVVLSLLLLPFAYWW*VQDGFG Trigger: CCCAAACCCATCCTGCACCCACCACCAGTAAGCAAA...CGGCAAGAGCAGCAGAGATAGGACCACCAGCAAGGGCGACTTCCCTATGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | GACACAGGAAGAAGAAGAAGTCAGGGTCCCGGGAAAGATAGACACAAGCACAAATCGAGCCACGGGTGCTaGTTCTCGTACGCGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DTGRRRSQGPGKDRHKHKSSHGC*FSYAFW Trigger: CCAGAACGCGTACGAGAAGCAGCACCCGTGGCTCGA...TTTGTGCTTGTGTCTATCTTTCCCGGGACCCTGACTTCTTCTTCTTCCTGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | GTGTGCGTTTGTGTGTGGTGTGAAGGGCAAAGCGCCATCGTTTTCCATAGGGAACTTACTGGTGGTGGGTaGAGGATGGGTTTGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVWCEGQSAIVFHRELTGGG*RMGLGA Trigger: AGCACCCAAACCCATCCTGCACCCACCACCAGTAAG...TTCCCTATGGAAAACGATGGCGCTTTGCCCTTCACACCACACACAAACGCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | GTGTGCGTTTGTGTGTGGTGTGAAGGGCAAAGCGCCATCGTTTTCCATAGGGAAGGCCCTTCTCATTGTTaGGTAGGTAGCAGTGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVWCEGQSAIVFHREGPSHC*VGSSGE Trigger: CTCGCCACTGCTACCTACCCAACAATGAGAAGGGCC...TTCCCTATGGAAAACGATGGCGCTTTGCCCTTCACACCACACACAAACGCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | AGGACGATGTCTTTGCCTGGGATAGACAGAGGTCAAGAGATGGACACAGGAAGAAGAACATTCTCGATGTaGTGGCACACGGTGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTMSLPGIDRGQEMDTGRRTFSM*WHTVAV Trigger: CACGGCCACCGTGTGCCACCACATCGAGAATGTTCT...TCTTCCTGTGTCCATCTCTTGACCTCTGTCTATCCCAGGCAAAGACATCGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | GTGTGCGTTTGTGTGTGGTGTGAAGGGCAAAGCGCCATCGTTTTCCATAGGGAATGTGAACTTCTTGCCTaGGTTGGGATGTTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVWCEGQSAIVFHRECELLA*VGMFRA Trigger: GGCCCTGAACATCCCAACCCAGGCAAGAAGTTCACA...TTCCCTATGGAAAACGATGGCGCTTTGCCCTTCACACCACACACAAACGCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR GCA 90 bp | CTACTTAATAACCTGGGGTTTCTACCCCATTGGCTTTGCAGTGCTCAGTGGGCATTGGACACTGCAGGCTaGCATCCTTGTTGCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLNNLGFLPHWLCSAQWALDTAG*HPCCHW Trigger: CCAATGGCAACAAGGATGGCAGCCTGCAGTGTCCAA...TGCCCACTGAGCACTGCAAAGCCAATGGGGTAGAAACCCCAGGTTATTAAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | AGGACGATGTCTTTGCCTGGGATAGACAGAGGTCAAGAGATGGACACAGGAAGAGCTTTTGCTTACTGGTaGTGGGTGCAGGATGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RTMSLPGIDRGQEMDTGRAFAYW*WVQDGF Trigger: AAACCCATCCTGCACCCACCACCAGTAAGCAAAAGC...TCTTCCTGTGTCCATCTCTTGACCTCTGTCTATCCCAGGCAAAGACATCGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CCA 90 bp | GATGTAATGGAGACACAGGTATTTCCACAGGACATGTCATGGGGGCCTTTCTGTTTCTCGTACGCGTTCTaGATGGTGATGCAGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DVMETQVFPQDMSWGPFCFSYAF*MVMQMS Trigger: GGACATCTGCATCACCATCCAGAACGCGTACGAGAA...ACAGAAAGGCCCCCATGACATGTCCTGTGGAAATACCTGTGTCTCCATTACATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 90 bp | GCGGCGGCGGGGGCGGAGGGGGCGCTGGAGGCGCGGCTGGCGCAATaGGAGCCTTGCGGCGCTGCGAGGCCAGGATGGCGTTGGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AAAGAEGALEARLAQ*EPCGAARPGWRWRR Trigger: CCGCCTCCAACGCCATCCTGGCCTCGCAGCGCCGCAAGGCTCCCATTGCGCCAGCCGCGCCTCCAGCGCCCCCTCCGCCCCCGCCGCCGC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS GCA 90 bp | GGGAACTCCTGGAGGCGGCGCAGGCTCCGTGGGGCCGGTGGCAGGTaGGGCCCAGAGCGCAGCTCCGGCGAAAGTGGCGCTGGGGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GNSWRRRRLRGAGGR*GPERSSGESGAGAH Trigger: GTGCGCCCCAGCGCCACTTTCGCCGGAGCTGCGCTCTGGGCCGCACCTGCCACCGGCCCCACGGAGCCTGCGCCGCCTCCAGGAGTTCCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 90 bp | CGGTGGCAGGTGCGGCCCAGAGCGCAGCTCCGGCGAAAGTGGCGCTaGGGCGCACAACGAGCGCACCCGGAGGTCCTCCGGGTGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RWQVRPRAQLRRKWR*GAQRAHPEVLRVAA Trigger: CGCTGCCACCCGGAGGACCTCCGGGTGCGCTCGTTGTGCGCCCCAGCGCCACTTTCGCCGGAGCTGCGCTCTGGGCCGCACCTGCCACCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 90 bp | TGGGGCCGGTGGCAGGTGCGGCCCAGAGCGCAGCTCCGGCGAAAGTaGCGCTGGGGCGCACAACGAGCGCACCCGGAGGTCCTCCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WGRWQVRPRAQLRRK*RWGAQRAHPEVLRV Trigger: CACCCGGAGGACCTCCGGGTGCGCTCGTTGTGCGCCCCAGCGCCACTTTCGCCGGAGCTGCGCTCTGGGCCGCACCTGCCACCGGCCCCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 90 bp | TCCTTGGGGGAACTCCTGGAGGCGGCGCAGGCTCCGTGGGGCCGGTaGCAGGTGCGGCCCAGAGCGCAGCTCCGGCGAAAGTGGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGELLEAAQAPWGR*QVRPRAQLRRKWRW Trigger: CCAGCGCCACTTTCGCCGGAGCTGCGCTCTGGGCCGCACCTGCCACCGGCCCCACGGAGCCTGCGCCGCCTCCAGGAGTTCCCCCAAGGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS TCA 90 bp | GGCGCTGCGAGGCCAGGATGGCGTTGGAGGCGGCGCGCGTGCTGTTaGCCAGCAGGCACTGCTGACAGGAGCAGGGCTGACCCGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GAARPGWRWRRRACC*PAGTADRSRADPSW Trigger: CCAGCTCGGGTCAGCCCTGCTCCTGTCAGCAGTGCCTGCTGGTCAACAGCACGCGCGCCGCCTCCAACGCCATCCTGGCCTCGCAGCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CAA 90 bp | TCCTCAGAGGCGGAGCTGGTGAGTTGCCTGGGCAACGGGCCTCTGGTTGGCCTGGGCGCAATGGGAGCCTaGCGGCGCTGCGAGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSEAELVSCLGNGPLVGLGAMGA*RRCEAR Trigger: CCTGGCCTCGCAGCGCCGCAAGGCTCCCATTGCGCC...CAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCCGCCTCTGAGGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
||
| CDS TCA 90 bp | GGTGGCACACGGTGGCCGTGTAGGGTCGCCAGCGGCTGTGCTCATTaGGCCACTCCCACACCACCACCCTGGCCACGTTCTGCGGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGTRWPCRVASGCAH*ATPTPPPWPRSAAG Trigger: TCCCGCCGCAGAACGTGGCCAGGGTGGTGGTGTGGGAGTGGCTCAATGAGCACAGCCGCTGGCGACCCTACACGGCCACCGTGTGCCACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS GCA 90 bp | CTGTGCTCATTGAGCCACTCCCACACCACCACCCTGGCCACGTTCTaGGGCGGGAAGCCCAGCCCGTTCACCGGCACCATCACACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCSLSHSHTTTLATF*GGKPSPFTGTITPW Trigger: CCAAGGTGTGATGGTGCCGGTGAACGGGCTGGGCTTCCCGCCGCAGAACGTGGCCAGGGTGGTGGTGTGGGAGTGGCTCAATGAGCACAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CAA 90 bp | TTTCTACCCCATTGGCTTTGCAGTGCTCAGTGGGCAGGTGGCAGCGCTGACGTGGAGGCCAGGATGGCGTaGGAGGCGGCGCGCGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLPHWLCSAQWAGGSADVEARMA*EAARVL Trigger: CAGCACGCGCGCCGCCTCCAACGCCATCCTGGCCTC...CACGTCAGCGCTGCCACCTGCCCACTGAGCACTGCAAAGCCAATGGGGTAGAAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGTGAGTTGCCTGGGCAACGGGCCTCTGGTTGGCCTGAGACGATCAGCTCCCACGGGCCAGGATaGCGACTTGGGAATGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GAGELPGQRASGWPETISSHGPG*RLGNGA Trigger: GGCTCCATTCCCAAGTCGCAATCCTGGCCCGTGGGA...GCTGATCGTCTCAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
||
| CDS GCA 90 bp | CCCACACGATGCCCTTGCCCGGCGCCGACGATGGATCGTAGAAGTTaGGTCGCACCGGCCGCATGGTACCTGTGTCTTGCCGGAACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PTRCPCPAPTMDRRS*VAPAAWYLCLAGTD Trigger: ATCAGTTCCGGCAAGACACAGGTACCATGCGGCCGGTGCGACGCAACTTCTACGATCCATCGTCGGCGCCGGGCAAGGGCATCGTGTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
||
| CDS-3UTR CAA 90 bp | TCCTCCCGCCGAGAGCGGAGGGAGGCATGTGCCAGGCTAGAGGCAAGGCAAAAGAACTTCTTGCCTGGGTaGGGATGTTCAGGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRRERREACARLEARQKNFLPG*GCSGPW Trigger: CCAGGGCCCTGAACATCCCAACCCAGGCAAGAAGTT...CTTTTGCCTTGCCTCTAGCCTGGCACATGCCTCCCTCCGCTCTCGGCGGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
||
| CDS GCA 90 bp | TGGGATGTTCAGGGCCCTGGATGCCCGTGGGGATGTCATAGACGATaGGGATCGTCTGGGTGTCTGCAAAACCAGGCAGCGAGTGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WDVQGPGCPWGCHRR*GSSGCLQNQAASAG Trigger: TCCCGCACTCGCTGCCTGGTTTTGCAGACACCCAGACGATCCGCATCGTCTATGACATCCCCACGGGCATCCAGGGCCCTGAACATCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
||
| CDS-3UTR CAA 90 bp | TTTTCCATAGGGAAGTCGCCCTTGCTGGTGGTCCTATCTCTGCTGCTCTTGCCGTCCCACACGATGCCCTaGCCCGGCGCCGACGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSIGKSPLLVVLSLLLLPSHTMP*PGADDG Trigger: TCCATCGTCGGCGCCGGGCAAGGGCATCGTGTGGGA...CGGCAAGAGCAGCAGAGATAGGACCACCAGCAAGGGCGACTTCCCTATGGAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
||
| CDS-3UTR CAA 90 bp | TCCCCAAGCTGGGAGAAGTGGAGAGGCACGTGGTGTACGTGCGTGAGTGCGTGCTGTTTCTTCTTGGTCTaGCGGCACACGCCGGGCACT | + |
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Preference number: 5 (lower is better) Translates to: SPSWEKWRGTWCTCVSACCFFLV*RHTPGT Trigger: AGTGCCCGGCGTGTGCCGCAAGACCAAGAAGAAACA...GCACGCACTCACGCACGTACACCACGTGCCTCTCCACTTCTCCCAGCTTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CAA 90 bp | TCCTCCCGCCGAGAGCGGAGGGAGGCATGTGCCAGGCTAGAGGCAAGGCAAAAGAGGCTGCCATCCTTGTaGCCATTGGAGTACATGGCC | + |
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Preference number: 5 (lower is better) Translates to: SSRRERREACARLEARQKRLPSL*PLEYMA Trigger: GGCCATGTACTCCAATGGCAACAAGGATGGCAGCCT...CTTTTGCCTTGCCTCTAGCCTGGCACATGCCTCCCTCCGCTCTCGGCGGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CAA 90 bp | GGAGCTGGTGAGTTGCCTGGGCAACGGGCCTCTGGTTGGCCTGAGACGATCAGCGACTCGCCCGTGGTGTaGGATGTTCCGATAGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: GAGELPGQRASGWPETISDSPVV*DVPIVK Trigger: CTTCACTATCGGAACATCCAACACCACGGGCGAGTC...GCTGATCGTCTCAGGCCAACCAGAGGCCCGTTGCCCAGGCAACTCACCAGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 90 bp | CCGGCGCCGACGATGGATCGTAGAAGTTGCGTCGCACCGGCCGCATaGTACCTGTGTCTTGCCGGAACTGATGCATGGATTGTAGGTCGA | + |
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Preference number: 5 (lower is better) Translates to: PAPTMDRRSCVAPAA*YLCLAGTDAWIVGR Trigger: TCGACCTACAATCCATGCATCAGTTCCGGCAAGACACAGGTACCATGCGGCCGGTGCGACGCAACTTCTACGATCCATCGTCGGCGCCGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS GCA 90 bp | CTCGGGCCGCACACTCTTGTTTCGGAGCACGCCCTCATAGCCAGATaGTGTGACCAGCCGCTCCATGCAAATGGTACAGTCCTCATCAGG | + |
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Preference number: 5 (lower is better) Translates to: LGPHTLVSEHALIAR*CDQPLHANGTVLIR Trigger: CCTGATGAGGACTGTACCATTTGCATGGAGCGGCTGGTCACAGCATCTGGCTATGAGGGCGTGCTCCGAAACAAGAGTGTGCGGCCCGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CAA 90 bp | CGTGCAACAGGACACGTGTGCGTTTGTGTGTGGTGTGAAGGGCAAAGCGCCATCGGCTTCACGTCGCTTTaGCTTACTGGTGGTGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: RATGHVCVCVWCEGQSAIGFTSL*LTGGGC Trigger: GCACCCACCACCAGTAAGCAAAAGCGACGTGAAGCC...GATGGCGCTTTGCCCTTCACACCACACACAAACGCACACGTGTCCTGTTGCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CAA 90 bp | CTACTTAATAACCTGGGGTTTCTACCCCATTGGCTTTGCAGTGCTCAGTGGGCACAGCGGCTGTGCTCATaGAGCCACTCCCACACCACC | + |
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Preference number: 5 (lower is better) Translates to: LLNNLGFLPHWLCSAQWAQRLCS*SHSHTT Trigger: GGTGGTGTGGGAGTGGCTCAATGAGCACAGCCGCTG...TGCCCACTGAGCACTGCAAAGCCAATGGGGTAGAAACCCCAGGTTATTAAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CAA 90 bp | TCCTCCCGCCGAGAGCGGAGGGAGGCATGTGCCAGGCTAGAGGCAAGGCAAAAGGGATTCTTGCTTTTCTaGAGGTGTTTCTTCTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: SSRRERREACARLEARQKGFLLF*RCFFLV Trigger: GACCAAGAAGAAACACCTCAAGAAAAGCAAGAATCC...CTTTTGCCTTGCCTCTAGCCTGGCACATGCCTCCCTCCGCTCTCGGCGGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CAA 90 bp | CAGGTATTTCCACAGGACATGTCATGGGGGCCTTTCTGTCTCTTTCTCCCCAAGTTGAGGTGTTTCTTCTaGGTCTTGCGGCACACGCCG | + |
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Preference number: 5 (lower is better) Translates to: QVFPQDMSWGPFCLFLPKLRCFF*VLRHTP Trigger: CGGCGTGTGCCGCAAGACCAAGAAGAAACACCTCAA...CTTGGGGAGAAAGAGACAGAAAGGCCCCCATGACATGTCCTGTGGAAATACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CAA 90 bp | AGGACGATGTCTTTGCCTGGGATAGACAGAGGTCAAGAGATGGACACAGGAAGACCATCCTTGTTGCCATaGGAGTACATGGCCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: RTMSLPGIDRGQEMDTGRPSLLP*EYMATR Trigger: CCTGGTGGCCATGTACTCCAATGGCAACAAGGATGG...TCTTCCTGTGTCCATCTCTTGACCTCTGTCTATCCCAGGCAAAGACATCGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS-3UTR CAA 90 bp | GATAGACACAAGCACAAAGTTAAGATAGCCTCGTCCCCAGTGGCCTGCGAAAAGTGCAGGCTGCCATCCTaGTTGCCATTGGAGTACATG | + |
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Preference number: 5 (lower is better) Translates to: DRHKHKVKIASSPVACEKCRLPS*LPLEYM Trigger: CATGTACTCCAATGGCAACAAGGATGGCAGCCTGCA...CTTTTCGCAGGCCACTGGGGACGAGGCTATCTTAACTTTGTGCTTGTGTCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS GCA 90 bp | TCCATGCAAATGGTACAGTCCTCATCAGGCGGGTTTTTCACCTTCTaGATGTACCTCCGAACCACATCCTCAGGATTCTTGCTTTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: SMQMVQSSSGGFFTF*MYLRTTSSGFLLFL Trigger: CAAGAAAAGCAAGAATCCTGAGGATGTGGTTCGGAGGTACATGCAGAAGGTGAAAAACCCGCCTGATGAGGACTGTACCATTTGCATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS GCA 72 bp | GGAGGCGCGGCTGGCGCAATGGGAGCCTTGCGGCGCTaGGAGGCCAGGATGGCGTTGGAGGCGGCGCGCGTG | + |
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Preference number: 6 (lower is better) Translates to: GGAAGAMGALRR*EARMALEAARV Trigger: CACGCGCGCCGCCTCCAACGCCATCCTGGCCTCGCAGCGCCGCAAGGCTCCCATTGCGCCAGCCGCGCCTCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS GCA 72 bp | GGGGCGCTGGAGGCGCGGCTGGCGCAATGGGAGCCTTaGGGCGCTGCGAGGCCAGGATGGCGTTGGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GALEARLAQWEP*GAARPGWRWRR Trigger: CCGCCTCCAACGCCATCCTGGCCTCGCAGCGCCGCAAGGCTCCCATTGCGCCAGCCGCGCCTCCAGCGCCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 72 bp | GTGCGGCCCAGAGCGCAGCTCCGGCGAAAGTGGCGCTaGGGCGCACAACGAGCGCACCCGGAGGTCCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: VRPRAQLRRKWR*GAQRAHPEVLR Trigger: CCGGAGGACCTCCGGGTGCGCTCGTTGTGCGCCCCAGCGCCACTTTCGCCGGAGCTGCGCTCTGGGCCGCAC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 72 bp | TCCTTGGGGGAACTCCTGGAGGCGGCGCAGGCTCCGTaGGGCCGGTGGCAGGTGCGGCCCAGAGCGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SLGELLEAAQAP*GRWQVRPRAQL Trigger: GAGCTGCGCTCTGGGCCGCACCTGCCACCGGCCCCACGGAGCCTGCGCCGCCTCCAGGAGTTCCCCCAAGGA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 72 bp | TGGCAGGTGCGGCCCAGAGCGCAGCTCCGGCGAAAGTaGCGCTGGGGCGCACAACGAGCGCACCCGGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: WQVRPRAQLRRK*RWGAQRAHPEV Trigger: GACCTCCGGGTGCGCTCGTTGTGCGCCCCAGCGCCACTTTCGCCGGAGCTGCGCTCTGGGCCGCACCTGCCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 72 bp | CGGTGTGGGCGCTCCGTTGGGGGCACTAGGGCTCCTTaGGGGAACTCCTGGAGGCGGCGCAGGCTCCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RCGRSVGGTRAP*GNSWRRRRLRG Trigger: CCCACGGAGCCTGCGCCGCCTCCAGGAGTTCCCCCAAGGAGCCCTAGTGCCCCCAACGGAGCGCCCACACCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS GCA 72 bp | GGGGAGCGCCGGAACCCCAGGCGGGATAGAGGCGCGTaGGCTGACGCTGGTGGACCTCTGTGGTCCTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: GERRNPRRDRGA*ADAGGPLWSWS Trigger: CGACCAGGACCACAGAGGTCCACCAGCGTCAGCGCACGCGCCTCTATCCCGCCTGGGGTTCCGGCGCTCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CAA 72 bp | ATGGGAGCCTTGCGGCGCTGCGAGGCCAGGATGGCGTaGGAGGCGGCGCGCGTGCTGTTGACCAGCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: MGALRRCEARMA*EAARVLLTSRH Trigger: GTGCCTGCTGGTCAACAGCACGCGCGCCGCCTCCAACGCCATCCTGGCCTCGCAGCGCCGCAAGGCTCCCAT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS TCA 72 bp | CGGGCCAGGATTGCGACTTGGGAATGGAGCCGACAGTaGGCGGGTAAGCCAGGTCCAGGCGACGGCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RARIATWEWSRQ*AGKPGPGDGAG Trigger: GCCTGCGCCGTCGCCTGGACCTGGCTTACCCGCTCACTGTCGGCTCCATTCCCAAGTCGCAATCCTGGCCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS GCA 72 bp | TTGAGCCACTCCCACACCACCACCCTGGCCACGTTCTaGGGCGGGAAGCCCAGCCCGTTCACCGGCACCATC | + |
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Preference number: 6 (lower is better) Translates to: LSHSHTTTLATF*GGKPSPFTGTI Trigger: GATGGTGCCGGTGAACGGGCTGGGCTTCCCGCCGCAGAACGTGGCCAGGGTGGTGGTGTGGGAGTGGCTCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CAA 72 bp | GCAGGGCTGACCCGAGCTGGCTCCCACGGGCCAGGATaGCGACTTGGGAATGGAGCCGACAGTGAGCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: AGLTRAGSHGPG*RLGNGADSERV Trigger: TACCCGCTCACTGTCGGCTCCATTCCCAAGTCGCAATCCTGGCCCGTGGGAGCCAGCTCGGGTCAGCCCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CAA 90 bp | CTGACAGGAGCAGGGCTGACCCGAGCTGGCTCCCACGGGCCAGGATaGCGACTTGGGAATGGAGCCGACAGTGAGCGGGTAAGCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LTGAGLTRAGSHGPG*RLGNGADSERVSQV Trigger: GACCTGGCTTACCCGCTCACTGTCGGCTCCATTCCCAAGTCGCAATCCTGGCCCGTGGGAGCCAGCTCGGGTCAGCCCTGCTCCTGTCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS GCA 72 bp | TGCCCTTGCCCGGCGCCGACGATGGATCGTAGAAGTTaGGTCGCACCGGCCGCATGGTACCTGTGTCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: CPCPAPTMDRRS*VAPAAWYLCLA Trigger: GGCAAGACACAGGTACCATGCGGCCGGTGCGACGCAACTTCTACGATCCATCGTCGGCGCCGGGCAAGGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 72 bp | CCATTCCCACACGATGCCCTTGCCCGGCGCCGACGATaGATCGTAGAAGTTGCGTCGCACCGGCCGCATGGT | + |
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Preference number: 6 (lower is better) Translates to: PFPHDALARRRR*IVEVASHRPHG Trigger: ACCATGCGGCCGGTGCGACGCAACTTCTACGATCCATCGTCGGCGCCGGGCAAGGGCATCGTGTGGGAATGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS GCA 72 bp | CAGGGCCCTGGATGCCCGTGGGGATGTCATAGACGATaGGGATCGTCTGGGTGTCTGCAAAACCAGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: QGPGCPWGCHRR*GSSGCLQNQAA Trigger: CGCTGCCTGGTTTTGCAGACACCCAGACGATCCGCATCGTCTATGACATCCCCACGGGCATCCAGGGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 72 bp | TGCCTGGGTTGGGATGTTCAGGGCCCTGGATGCCCGTaGGGATGTCATAGACGATGCGGATCGTCTGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: CLGWDVQGPGCP*GCHRRCGSSGC Trigger: ACACCCAGACGATCCGCATCGTCTATGACATCCCCACGGGCATCCAGGGCCCTGAACATCCCAACCCAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS TCA 72 bp | TGGGTAGGTAGCAGTGGCGAGGGAAGCCTCTGGCTGTaGACTTCTTGCCTGGGTTGGGATGTTCAGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: WVGSSGEGSLWL*TSCLGWDVQGP Trigger: AGGGCCCTGAACATCCCAACCCAGGCAAGAAGTTCACAGCCAGAGGCTTCCCTCGCCACTGCTACCTACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 72 bp | ACTGCAGGCTGCCATCCTTGTTGCCATTGGAGTACATaGCCACCAGGCAGAGCAGGTGATACATGTGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: TAGCHPCCHWST*PPGRAGDTCGR Trigger: GCGGCCACATGTATCACCTGCTCTGCCTGGTGGCCATGTACTCCAATGGCAACAAGGATGGCAGCCTGCAGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS GCA 72 bp | CACACTCTTGTTTCGGAGCACGCCCTCATAGCCAGATaGTGTGACCAGCCGCTCCATGCAAATGGTACAGTC | + |
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Preference number: 6 (lower is better) Translates to: HTLVSEHALIAR*CDQPLHANGTV Trigger: GACTGTACCATTTGCATGGAGCGGCTGGTCACAGCATCTGGCTATGAGGGCGTGCTCCGAAACAAGAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 72 bp | ACGATGGATCGTAGAAGTTGCGTCGCACCGGCCGCATaGTACCTGTGTCTTGCCGGAACTGATGCATGGATT | + |
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Preference number: 6 (lower is better) Translates to: TMDRRSCVAPAA*YLCLAGTDAWI Trigger: AATCCATGCATCAGTTCCGGCAAGACACAGGTACCATGCGGCCGGTGCGACGCAACTTCTACGATCCATCGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CCA 72 bp | TGTCCCTGTCTTCTCCCCGTAGATGGCTTTGCAGGTTaGACACTGCAGGCTGCCATCCTTGTTGCCATTGGA | + |
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Preference number: 6 (lower is better) Translates to: CPCLLPVDGFAG*TLQAAILVAIG Trigger: TCCAATGGCAACAAGGATGGCAGCCTGCAGTGTCCAACCTGCAAAGCCATCTACGGGGAGAAGACAGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS CAA 72 bp | GGATTCTTGCTTTTCTTGAGGTGTTTCTTCTTGGTCTaGCGGCACACGCCGGGCACTCCAGGCACAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: GFLLFLRCFFLV*RHTPGTPGTGF Trigger: GAAGCCTGTGCCTGGAGTGCCCGGCGTGTGCCGCAAGACCAAGAAGAAACACCTCAAGAAAAGCAAGAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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| CDS GCA 72 bp | ATGGTACAGTCCTCATCAGGCGGGTTTTTCACCTTCTaGATGTACCTCCGAACCACATCCTCAGGATTCTTG | + |
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Preference number: 6 (lower is better) Translates to: MVQSSSGGFFTF*MYLRTTSSGFL Trigger: CAAGAATCCTGAGGATGTGGTTCGGAGGTACATGCAGAAGGTGAAAAACCCGCCTGATGAGGACTGTACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031607.7 |
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