Pregenerated sensors for DTWD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023330Ensembl transcript IDs: ENSMUST00000110437.4, ENSMUST00000170908.8
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CCCCGGAGTAAACAAGGCTCGACTGCAAGAGCCCAGGACAAGCGGGTGTGCAGATGGCGTGTGCTCTCATaGAGATCCCAGCCTTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: PRSKQGSTARAQDKRVCRWRVLS*RSQPSS Trigger: CGAGGAAGGCTGGGATCTGCATGAGAGCACACGCCA...TCTGCACACCCGCTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CCA 90 bp | CCCCGGAGTAAACAAGGCTCGACTGCAAGAGCCCAGGACAAGCGGGTGTGCAGATGGAAGCTGCACACATaGGATCTGCTCGGTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PRSKQGSTARAQDKRVCRWKLHT*DLLGGH Trigger: GTGCCCACCGAGCAGATCCCATGTGTGCAGCTTCCA...TCTGCACACCCGCTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR GCA 90 bp | CCCCGGAGTAAACAAGGCTCGACTGCAAGAGCCCAGGACAAGCGGGTGTGCAGAATCTTCAATGGAAGCTaGACACATGGGATCTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: PRSKQGSTARAQDKRVCRIFNGS*THGICS Trigger: CGAGCAGATCCCATGTGTGCAGCTTCCATTGAAGAT...TCTGCACACCCGCTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CCA 90 bp | CCCCGGAGTAAACAAGGCTCGACTGCAAGAGCCCAGGACAAGCGGGTGTGCAGAGGAAAGGAAAGTATCTaGCTTCCCTTTTTGATGGCG | + |
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Preference number: 4 (lower is better) Translates to: PRSKQGSTARAQDKRVCRGKESI*LPFLMA Trigger: CGCCATCAAAAAGGGAAGCCAGATACTTTCCTTTCC...TCTGCACACCCGCTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR TCA 90 bp | CCCCGGAGTAAACAAGGCTCGACTGCAAGAGCCCAGGACAAGCGGGTGTGCAGATCTTCTTTACTTTCTTaGGGAACTACAGATGGACTG | + |
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Preference number: 4 (lower is better) Translates to: PRSKQGSTARAQDKRVCRSSLLS*GTTDGL Trigger: CAGTCCATCTGTAGTTCCTCAAGAAAGTAAAGAAGA...TCTGCACACCCGCTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR TCA 90 bp | CCCCGGAGTAAACAAGGCTCGACTGCAAGAGCCCAGGACAAGCGGGTGTGCAGAAATGGAAGTGGTTTGTaGCGGTTTTGTTTCTACACA | + |
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Preference number: 4 (lower is better) Translates to: PRSKQGSTARAQDKRVCRNGSGL*RFCFYT Trigger: TGTGTAGAAACAAAACCGTCACAAACCACTTCCATT...TCTGCACACCCGCTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CCA 90 bp | CCCCGGAGTAAACAAGGCTCGACTGCAAGAGCCCAGGACAAGCGGGTGTGCAGACTAGGAAGTAATAAATaGCTTCAATTGTGGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: PRSKQGSTARAQDKRVCRLGSNK*LQLWKG Trigger: TCCTTTCCACAATTGAAGCCATTTATTACTTCCTAG...TCTGCACACCCGCTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CCA 90 bp | ACATGGTTACCACCCCGGAGTAAACAAGGCTCGACTGCAAGAGCCCAGGACAAGCTAGGAAGTAATAAATaGCTTCAATTGTGGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: TWLPPRSKQGSTARAQDKLGSNK*LQLWKG Trigger: TCCTTTCCACAATTGAAGCCATTTATTACTTCCTAG...CTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGGTGGTAACCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CCA 90 bp | GCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCAATCAGGATCATCTCTTATGGAAGCTGCACACATaGGATCTGCTCGGTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: AQIEQIASDLSFNQDHLLWKLHT*DLLGGH Trigger: GTGCCCACCGAGCAGATCCCATGTGTGCAGCTTCCA...TAAGAGATGATCCTGATTGAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CCA 90 bp | GGATATGCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCAATCAGGATCATGGGCACGTTTCCCACTaGGACACAGCATGTGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: GYAQIEQIASDLSFNQDHGHVSH*DTACVA Trigger: TGCTACACATGCTGTGTCCCAGTGGGAAACGTGCCC...ATGATCCTGATTGAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGCATATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CCA 90 bp | AGTATAGTGGGATATGCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCAATGGGCACGTTTCCCACTaGGACACAGCATGTGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: SIVGYAQIEQIASDLSFNGHVSH*DTACVA Trigger: TGCTACACATGCTGTGTCCCAGTGGGAAACGTGCCC...ATTGAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGCATATCCCACTATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR GCA 90 bp | GCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCAATCAGGATCATCTCTTAGCACAGCGGTGCTCTTaGCGTCTGTTTCATTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: AQIEQIASDLSFNQDHLLAQRCS*RLFHLD Trigger: ATCCAAATGAAACAGACGGCAAGAGCACCGCTGTGC...TAAGAGATGATCCTGATTGAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR GCA 90 bp | GGATATGCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCAATCAGGATCATGCACAGCGGTGCTCTTaGCGTCTGTTTCATTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: GYAQIEQIASDLSFNQDHAQRCS*RLFHLD Trigger: ATCCAAATGAAACAGACGGCAAGAGCACCGCTGTGC...ATGATCCTGATTGAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGCATATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR TCA 90 bp | TACAGTATAGTGGGATATGCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCTTGAAGGGGGTCTTCTaGAGCAATGGAAGTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: YSIVGYAQIEQIASDLSFLKGVF*SNGSGL Trigger: CAAACCACTTCCATTGCTTCAGAAGACCCCCTTCAA...GAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGCATATCCCACTATACTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR GCA 90 bp | GCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCAATCAGGATCATCTCTTAATCTTCAATGGAAGCTaGACACATGGGATCTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: AQIEQIASDLSFNQDHLLIFNGS*THGICS Trigger: CGAGCAGATCCCATGTGTGCAGCTTCCATTGAAGAT...TAAGAGATGATCCTGATTGAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CCA 90 bp | GCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCAATCAGGATCATCTCTTATCTCTCCAGAGCCTCTaGCATTCTTTATCAAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: AQIEQIASDLSFNQDHLLSLQSL*HSLSSG Trigger: ACCGCTTGATAAAGAATGCCAGAGGCTCTGGAGAGA...TAAGAGATGATCCTGATTGAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CCA 90 bp | CAGCATATTAAAATGTACAGTATAGTGGGATATGCCCAAATTGAGCAAATAGCTTCTCTCCAGAGCCTCTaGCATTCTTTATCAAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: QHIKMYSIVGYAQIEQIASLQSL*HSLSSG Trigger: ACCGCTTGATAAAGAATGCCAGAGGCTCTGGAGAGA...AGCTATTTGCTCAATTTGGGCATATCCCACTATACTGTACATTTTAATATGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CCA 90 bp | CAGCATATTAAAATGTACAGTATAGTGGGATATGCCCAAATTGAGCAAATAGCTGGAAAGGAAAGTATCTaGCTTCCCTTTTTGATGGCG | + |
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Preference number: 4 (lower is better) Translates to: QHIKMYSIVGYAQIEQIAGKESI*LPFLMA Trigger: CGCCATCAAAAAGGGAAGCCAGATACTTTCCTTTCC...AGCTATTTGCTCAATTTGGGCATATCCCACTATACTGTACATTTTAATATGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CCA 90 bp | TACAGTATAGTGGGATATGCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCGATATCAATCTTCAATaGAAGCTGCACACATGGGAT | + |
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Preference number: 4 (lower is better) Translates to: YSIVGYAQIEQIASDLSFDINLQ*KLHTWD Trigger: ATCCCATGTGTGCAGCTTCCATTGAAGATTGATATC...GAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGCATATCCCACTATACTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| 3UTR CAA 72 bp | GTGGGATATGCCCAAATTGAGCAAATAGCTTCTGATTaGTCTTTCAATCAGGATCATCTCTTAAAAATTGCC | + |
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Preference number: 4 (lower is better) Translates to: VGYAQIEQIASD*SFNQDHLLKIA Trigger: GGCAATTTTTAAGAGATGATCCTGATTGAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGCATATCCCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR TCA 90 bp | AGTATAGTGGGATATGCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCAATTCTTCTTTACTTTCTTaGGGAACTACAGATGGACTG | + |
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Preference number: 4 (lower is better) Translates to: SIVGYAQIEQIASDLSFNSSLLS*GTTDGL Trigger: CAGTCCATCTGTAGTTCCTCAAGAAAGTAAAGAAGA...ATTGAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGCATATCCCACTATACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR TCA 90 bp | CAGCATATTAAAATGTACAGTATAGTGGGATATGCCCAAATTGAGCAAATAGCTAATGGAAGTGGTTTGTaGCGGTTTTGTTTCTACACA | + |
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Preference number: 4 (lower is better) Translates to: QHIKMYSIVGYAQIEQIANGSGL*RFCFYT Trigger: TGTGTAGAAACAAAACCGTCACAAACCACTTCCATT...AGCTATTTGCTCAATTTGGGCATATCCCACTATACTGTACATTTTAATATGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CAA 90 bp | ACATGGTTACCACCCCGGAGTAAACAAGGCTCGACTGCAAGAGCCCAGGACAAGTCGTCCGTAGTCCTCTaGAGTTTCCGAGGTGGCACA | + |
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Preference number: 5 (lower is better) Translates to: TWLPPRSKQGSTARAQDKSSVVL*SFRGGT Trigger: TGTGCCACCTCGGAAACTCAAGAGGACTACGGACGA...CTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGGTGGTAACCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CAA 90 bp | CCCCGGAGTAAACAAGGCTCGACTGCAAGAGCCCAGGACAAGCGGGTGTGCAGATGGTTTGTGACGGTTTaGTTTCTACACAGTTTGCAT | + |
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Preference number: 5 (lower is better) Translates to: PRSKQGSTARAQDKRVCRWFVTV*FLHSLH Trigger: ATGCAAACTGTGTAGAAACAAAACCGTCACAAACCA...TCTGCACACCCGCTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CAA 90 bp | ACATGGTTACCACCCCGGAGTAAACAAGGCTCGACTGCAAGAGCCCAGGACAAGATCTGGCTTCCCTTTTaGATGGCGCCAAAAGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: TWLPPRSKQGSTARAQDKIWLPF*MAPKAS Trigger: ACTTGCTTTTGGCGCCATCAAAAAGGGAAGCCAGAT...CTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGGTGGTAACCATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CAA 90 bp | CCCCGGAGTAAACAAGGCTCGACTGCAAGAGCCCAGGACAAGCGGGTGTGCAGAATCTTCTTTACTTTCTaGAGGAACTACAGATGGACT | + |
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Preference number: 5 (lower is better) Translates to: PRSKQGSTARAQDKRVCRIFFTF*RNYRWT Trigger: AGTCCATCTGTAGTTCCTCAAGAAAGTAAAGAAGAT...TCTGCACACCCGCTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CAA 90 bp | ACATGGTTACCACCCCGGAGTAAACAAGGCTCGACTGCAAGAGCCCAGGACAAGATCTTCTTTACTTTCTaGAGGAACTACAGATGGACT | + |
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Preference number: 5 (lower is better) Translates to: TWLPPRSKQGSTARAQDKIFFTF*RNYRWT Trigger: AGTCCATCTGTAGTTCCTCAAGAAAGTAAAGAAGAT...CTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGGTGGTAACCATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CAA 90 bp | TACAGTATAGTGGGATATGCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCTCGTCCGTAGTCCTCTaGAGTTTCCGAGGTGGCACA | + |
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Preference number: 5 (lower is better) Translates to: YSIVGYAQIEQIASDLSFSSVVL*SFRGGT Trigger: TGTGCCACCTCGGAAACTCAAGAGGACTACGGACGA...GAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGCATATCCCACTATACTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CAA 90 bp | GCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCAATCAGGATCATCTCTTAGGTGGCACATCAAGGTaGTCAGCTTTGTTTCTACCC | + |
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Preference number: 5 (lower is better) Translates to: AQIEQIASDLSFNQDHLLGGTSR*SALFLP Trigger: GGGTAGAAACAAAGCTGACAACCTTGATGTGCCACC...TAAGAGATGATCCTGATTGAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CAA 90 bp | TACAGTATAGTGGGATATGCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCATCTGGCTTCCCTTTTaGATGGCGCCAAAAGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: YSIVGYAQIEQIASDLSFIWLPF*MAPKAS Trigger: ACTTGCTTTTGGCGCCATCAAAAAGGGAAGCCAGAT...GAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGCATATCCCACTATACTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS-3UTR CAA 90 bp | AGTATAGTGGGATATGCCCAAATTGAGCAAATAGCTTCTGATTTGTCTTTCAATTGGTTTGTGACGGTTTaGTTTCTACACAGTTTGCAT | + |
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Preference number: 5 (lower is better) Translates to: SIVGYAQIEQIASDLSFNWFVTV*FLHSLH Trigger: ATGCAAACTGTGTAGAAACAAAACCGTCACAAACCA...ATTGAAAGACAAATCAGAAGCTATTTGCTCAATTTGGGCATATCCCACTATACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS CCA 72 bp | TCTTCAATGGAAGCTGCACACATGGGATCTGCTCGGTaGGCACGTTTCCCACTGGGACACAGCATGTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: SSMEAAHMGSAR*ARFPLGHSMCS Trigger: GCTACACATGCTGTGTCCCAGTGGGAAACGTGCCCACCGAGCAGATCCCATGTGTGCAGCTTCCATTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS CAA 72 bp | TCATGCAGATCCCAGCCTTCCTCGTCCGTAGTCCTCTaGAGTTTCCGAGGTGGCACATCAAGGTTGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SCRSQPSSSVVL*SFRGGTSRLSA Trigger: AGCTGACAACCTTGATGTGCCACCTCGGAAACTCAAGAGGACTACGGACGAGGAAGGCTGGGATCTGCATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS GCA 72 bp | ATATCAATCTTCAATGGAAGCTGCACACATGGGATCTaGTCGGTGGGCACGTTTCCCACTGGGACACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ISIFNGSCTHGI*SVGTFPTGTQH Trigger: ATGCTGTGTCCCAGTGGGAAACGTGCCCACCGAGCAGATCCCATGTGTGCAGCTTCCATTGAAGATTGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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| CDS CCA 72 bp | GTAATAAATGGCTTCAATTGTGGAAAGGAAAGTATCTaGCTTCCCTTTTTGATGGCGCCAAAAGCAAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: VINGFNCGKESI*LPFLMAPKASF Trigger: AAAACTTGCTTTTGGCGCCATCAAAAAGGGAAGCCAGATACTTTCCTTTCCACAATTGAAGCCATTTATTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110437.4 ENSMUST00000170908.8 |
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