Pregenerated sensors for DTNA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024302Ensembl transcript IDs: ENSMUST00000047954.15, ENSMUST00000115832.4, ENSMUST00000220904.2, ENSMUST00000221880.2, ENSMUST00000222726.2
Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CAGGCGTCAGAACACTTCTTTAGGGGAGGGGGTTGTTGGAGCTGCTaGGTGTGGTGGCTCCTCTTTCCCAGCGAGCGAGCGGGAGGCTGC | + |
Preference number: 1 (lower is better) Translates to: QASEHFFRGGGCWSC*VWWLLFPSERAGGC Trigger: GCAGCCTCCCGCTCGCTCGCTGGGAAAGAGGAGCCACCACACCCAGCAGCTCCAACAACCCCCTCCCCTAAAGAAGTGTTCTGACGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR GCA 90 bp | GGCGGGGCAAAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTaGCATGATCTAAGTCCAGCAGCCACACCCCAGGGATGCAGGGAT | + |
Preference number: 1 (lower is better) Translates to: GGAKSVCKELSRDTP*HDLSPAATPQGCRD Trigger: ATCCCTGCATCCCTGGGGTGTGGCTGCTGGACTTAGATCATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR CCA 90 bp | CCATGCTACAGCCCTTACTGTGGTGACCCTTCAACATGCAGAGGCTaGGAGGGGCTGTACAGGAAAGGGATAGAAAGGGACCTGACAAAG | + |
Preference number: 1 (lower is better) Translates to: PCYSPYCGDPSTCRG*EGLYRKGIERDLTK Trigger: CTTTGTCAGGTCCCTTTCTATCCCTTTCCTGTACAGCCCCTCCCAGCCTCTGCATGTTGAAGGGTCACCACAGTAAGGGCTGTAGCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR GCA 90 bp | CCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTaGGTGGAATTGAACCAATGTGAGCTCAGCAACCCAAGGCTGCCA | + |
Preference number: 1 (lower is better) Translates to: PYLLRTQWSSLLVAP*VELNQCELSNPRLP Trigger: TGGCAGCCTTGGGTTGCTGAGCTCACATTGGTTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
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3UTR TCA 90 bp | GGCAAAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTGCCATaGTCTAAGTCCAGCAGCCACACCCCAGGGATGCAGGGATGGACA | + |
Preference number: 1 (lower is better) Translates to: GKVCLQRVIKGYTLP*SKSSSHTPGMQGWT Trigger: TGTCCATCCCTGCATCCCTGGGGTGTGGCTGCTGGACTTAGATCATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR TCA 90 bp | GCTGACAGAAATGCAGGTATCTGGGATGTAGTGGTTTTTCAGTACTaGGGAGGAGGCACCAATGGCCACCTGCACCATCTAGAGAGGTGT | + |
Preference number: 1 (lower is better) Translates to: ADRNAGIWDVVVFQY*GGGTNGHLHHLERC Trigger: ACACCTCTCTAGATGGTGCAGGTGGCCATTGGTGCCTCCTCCTCAGTACTGAAAAACCACTACATCCCAGATACCTGCATTTCTGTCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CCA 90 bp | CTGTGGAGAGCAAGGCGTGGAGGAGTGCAGGTAACTGTAGTCCGTTaGGGGACCTTATGGCACCTGTGGTTTATAAACAGCTTTAGTAAC | + |
Preference number: 1 (lower is better) Translates to: LWRARRGGVQVTVVR*GTLWHLWFINSFSN Trigger: GTTACTAAAGCTGTTTATAAACCACAGGTGCCATAAGGTCCCCCAACGGACTACAGTTACCTGCACTCCTCCACGCCTTGCTCTCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CCA 90 bp | GCTGGGATCATAGGCATGTGTCACCATGCCAGGTTTATACAGCCCTaGAAGCTTGAACCAAGGGCTTTGTGTATGCTAAGCAAACCCTCG | + |
Preference number: 1 (lower is better) Translates to: AGIIGMCHHARFIQP*KLEPRALCMLSKPS Trigger: CGAGGGTTTGCTTAGCATACACAAAGCCCTTGGTTCAAGCTTCCAGGGCTGTATAAACCTGGCATGGTGACACATGCCTATGATCCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR TCA 90 bp | CATAGGCATGTGTCACCATGCCAGGTTTATACAGCCCTGGAAGCTTaGACCAAGGGCTTTGTGTATGCTAAGCAAACCCTCGGCCAATTG | + |
Preference number: 1 (lower is better) Translates to: HRHVSPCQVYTALEA*TKGFVYAKQTLGQL Trigger: CAATTGGCCGAGGGTTTGCTTAGCATACACAAAGCCCTTGGTTCAAGCTTCCAGGGCTGTATAAACCTGGCATGGTGACACATGCCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR TCA 90 bp | GGTTTGCTCTTGTGGGGCTGCAGCTTGGGCAACAACATTGACATTTaGGGAGCTCTAATGACTGACCTTCTATCAAGAGAAGGGTCCCGA | + |
Preference number: 1 (lower is better) Translates to: GLLLWGCSLGNNIDI*GALMTDLLSREGSR Trigger: TCGGGACCCTTCTCTTGATAGAAGGTCAGTCATTAGAGCTCCTCAAATGTCAATGTTGTTGCCCAAGCTGCAGCCCCACAAGAGCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR GCA 90 bp | CAACAAAATCCACCTGTGCAAAGAAATCAGAGAACTGTGCAGTTGTaGGACTTTGGTGCTAGCCTGAGCTCAGGGAACTTTGCGAGGTGG | + |
Preference number: 1 (lower is better) Translates to: QQNPPVQRNQRTVQL*DFGASLSSGNFARW Trigger: CCACCTCGCAAAGTTCCCTGAGCTCAGGCTAGCACCAAAGTCGCACAACTGCACAGTTCTCTGATTTCTTTGCACAGGTGGATTTTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR TCA 90 bp | ACGTGGGTGTGCAATTCATGGTGGGATAAGAAAGAACCATCCCTGTaGGATACAGTTGAACAGAATGGACAGACGGATGAAACCTGCTGG | + |
Preference number: 1 (lower is better) Translates to: TWVCNSWWDKKEPSL*DTVEQNGQTDETCW Trigger: CCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAACTGTATCTCACAGGGATGGTTCTTTCTTATCCCACCATGAATTGCACACCCACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
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3UTR TCA 90 bp | GATCATCCGATAATCCATCTTCATAGTCTCCAACACGTCTCCCTCTaGCCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAAC | + |
Preference number: 1 (lower is better) Translates to: DHPIIHLHSLQHVSL*PTKLTPTSILTNHN Trigger: GTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACGTGTTGGAGACTATGAAGATGGATTATCGGATGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
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3UTR TCA 90 bp | ATGCACAGGGTGCTCAAGCTGCTTTTCTTTTGCTCTAGTTTGGTTTaGCTTCTCTCGGTGTACAGCTTCTTCTGCTTGCTTCTGAACCTG | + |
Preference number: 1 (lower is better) Translates to: MHRVLKLLFFCSSLV*LLSVYSFFCLLLNL Trigger: CAGGTTCAGAAGCAAGCAGAAGAAGCTGTACACCGAGAGAAGTCAAACCAAACTAGAGCAAAAGAAAAGCAGCTTGAGCACCCTGTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR TCA 90 bp | CAGCAGCAGGCTCTCAGCCTGTGGGTGTTTGTTTTGAACCAGGGATaGGCCATGTTACAGAAGATGGAGTTGATAAATTATCTAGGAACA | + |
Preference number: 1 (lower is better) Translates to: QQQALSLWVFVLNQG*AMLQKMELINYLGT Trigger: TGTTCCTAGATAATTTATCAACTCCATCTTCTGTAACATGGCTCATCCCTGGTTCAAAACAAACACCCACAGGCTGAGAGCCTGCTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR TCA 90 bp | TTTAAAGCTGAAGGTCTCGGGACTACCGATGAGGGAACTTGTCAATaGGCAGTGCTGTGTAAGACATGCTTCCTAAAGATACACTGTGGA | + |
Preference number: 1 (lower is better) Translates to: FKAEGLGTTDEGTCQ*AVLCKTCFLKIHCG Trigger: TCCACAGTGTATCTTTAGGAAGCATGTCTTACACAGCACTGCTCATTGACAAGTTCCCTCATCGGTAGTCCCGAGACCTTCAGCTTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CCA 90 bp | CTCCCACCCCAATTTCTTCAAGACAGGGTGTTATATATCCTAGACTaGCCTCAAATTCACTATGTAGCTGAGGATGACCTCAAACTCCCA | + |
Preference number: 1 (lower is better) Translates to: LPPQFLQDRVLYILD*PQIHYVAEDDLKLP Trigger: TGGGAGTTTGAGGTCATCCTCAGCTACATAGTGAATTTGAGGCCAGTCTAGGATATATAACACCCTGTCTTGAAGAAATTGGGGTGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CCA 90 bp | GTAGAAACCAAGGAGATAAGAGAGAATGAGTGTGTAACCTACATTTaGGTCTCTGGCAGATGGCTTCTATCCATGCTACAGCCCTTACTG | + |
Preference number: 1 (lower is better) Translates to: VETKEIRENECVTYI*VSGRWLLSMLQPLL Trigger: CAGTAAGGGCTGTAGCATGGATAGAAGCCATCTGCCAGAGACCCAAATGTAGGTTACACACTCATTCTCTCTTATCTCCTTGGTTTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR GCA 90 bp | CTGTTTCTACATGCATGCAAAATAAGAGGCGGGGCAAAGTCTGTTTaGAAAGAGTTATCAAGGGATACACCCTGCCATGATCTAAGTCCA | + |
Preference number: 1 (lower is better) Translates to: LFLHACKIRGGAKSV*KELSRDTPCHDLSP Trigger: TGGACTTAGATCATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGCCTCTTATTTTGCATGCATGTAGAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR CCA 90 bp | TCTTTTTGGTTCAAAGGAAAAATGCCCTACCTTCTGAGGACACAGTaGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAATTGAACCAATGT | + |
Preference number: 1 (lower is better) Translates to: SFWFKGKMPYLLRTQ*SSLLVAPCVELNQC Trigger: ACATTGGTTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCCTTTGAACCAAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
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3UTR CCA 90 bp | ATTCTATGGCTGAGTCAGAGTATGTTGAAGGAAAACAATCCACTTTaGAAAGGAGCCCCCAAGAGCCCATTATTCCTGTTGGTAGGTTTA | + |
Preference number: 1 (lower is better) Translates to: ILWLSQSMLKENNPL*KGAPKSPLFLLVGL Trigger: TAAACCTACCAACAGGAATAATGGGCTCTTGGGGGCTCCTTTCCAAAGTGGATTGTTTTCCTTCAACATACTCTGACTCAGCCATAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR GCA 90 bp | ACGGAGCTAGGAAATATCATCATACACTTTGGTACATGCACAGGGTaGTCAAGCTGCTTTTCTTTTGCTCTAGTTTGGTTTGACTTCTCT | + |
Preference number: 1 (lower is better) Translates to: TELGNIIIHFGTCTG*SSCFSFALVWFDFS Trigger: AGAGAAGTCAAACCAAACTAGAGCAAAAGAAAAGCAGCTTGAGCACCCTGTGCATGTACCAAAGTGTATGATGATATTTCCTAGCTCCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR CCA 90 bp | GTGAAATCTTTAAATAACGGAGCTAGGAAATATCATCATACACTTTaGTACATGCACAGGGTGCTCAAGCTGCTTTTCTTTTGCTCTAGT | + |
Preference number: 1 (lower is better) Translates to: VKSLNNGARKYHHTL*YMHRVLKLLFFCSS Trigger: ACTAGAGCAAAAGAAAAGCAGCTTGAGCACCCTGTGCATGTACCAAAGTGTATGATGATATTTCCTAGCTCCGTTATTTAAAGATTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR-3UTR CCA 90 bp | AGTTCAGTCCAGCCAGCGACTGAGGGCCACCAGCAGGGTCTGAGGTCTAATGTAGCCCTCTGCAGACAGTaGGGTCAGAAAGTGAGTTCT | + |
Preference number: 2 (lower is better) Translates to: SSVQPATEGHQQGLRSNVALCRQ*GQKVSS Trigger: AGAACTCACTTTCTGACCCCACTGTCTGCAGAGGGC...TACATTAGACCTCAGACCCTGCTGGTGGCCCTCAGTCGCTGGCTGGACTGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR-3UTR TCA 90 bp | CTGTGGGGAGGCTTGGCTGTGCTAGATCAATGCTCATTCATAGGCCACCAGCTTGTCTGGTCTCAGTGCTaGCGTGGAGTTGAGAGGAGA | + |
Preference number: 2 (lower is better) Translates to: LWGGLAVLDQCSFIGHQLVWSQC*RGVERR Trigger: TCTCCTCTCAACTCCACGTCAGCACTGAGACCAGAC...AAGCTGGTGGCCTATGAATGAGCATTGATCTAGCACAGCCAAGCCTCCCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220904.2 |
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3UTR-3UTR CCA 90 bp | GTGATTTCACAGAGGACGATGGGCAGGGGAAGAGAGATGAACGTTAAGACACGCGGTTGTTGGAGCTGCTaGGTGTGGTGGCTCCTCTTT | + |
Preference number: 2 (lower is better) Translates to: VISQRTMGRGREMNVKTRGCWSC*VWWLLF Trigger: AAAGAGGAGCCACCACACCCAGCAGCTCCAACAACC...GCGTGTCTTAACGTTCATCTCTCTTCCCCTGCCCATCGTCCTCTGTGAAATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CAA 90 bp | AGCCCATTATTCCTGTTGGTAGGTTTAATCATTTCTCAGAGGGACTaGGGGACATGGGTAGGCCAAGGACCCTTCTTGGCTCCTGGGTCC | + |
Preference number: 2 (lower is better) Translates to: SPLFLLVGLIISQRD*GTWVGQGPFLAPGS Trigger: GGACCCAGGAGCCAAGAAGGGTCCTTGGCCTACCCATGTCCCCAAGTCCCTCTGAGAAATGATTAAACCTACCAACAGGAATAATGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CAA 90 bp | CCGCAACAAAATCCACCTGTGCAAAGAAATCAGAGAACTGTGCAGTaGTGCGACTTTGGTGCTAGCCTGAGCTCAGGGAACTTTGCGAGG | + |
Preference number: 2 (lower is better) Translates to: PQQNPPVQRNQRTVQ*CDFGASLSSGNFAR Trigger: CCTCGCAAAGTTCCCTGAGCTCAGGCTAGCACCAAAGTCGCACAACTGCACAGTTCTCTGATTTCTTTGCACAGGTGGATTTTGTTGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR-3UTR CCA 90 bp | GGGCTTCAGAGTATGACCCAGCCCAACGGTCATGATGCCCCTATCTCCAGAAAATGTGGGGCTGCAGCTTaGGCAACAACATTGACATTT | + |
Preference number: 2 (lower is better) Translates to: GLQSMTQPNGHDAPISRKCGAAA*ATTLTF Trigger: AAATGTCAATGTTGTTGCCCAAGCTGCAGCCCCACA...TTTTCTGGAGATAGGGGCATCATGACCGTTGGGCTGGGTCATACTCTGAAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR-3UTR GCA 90 bp | CTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAACCACCTATTGTAGATTGTTaGCCCCCTTCCCTCCCAGTT | + |
Preference number: 2 (lower is better) Translates to: LPLTNQTYPNFHPDKPQPPIVDC*PPSLPV Trigger: AACTGGGAGGGAAGGGGGGCAACAATCTACAATAGG...TGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR-3UTR CCA 90 bp | CTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAATTGAACCAACCATCTCCTGAGTGCTaGGATCATAGGCATGTGTCA | + |
Preference number: 2 (lower is better) Translates to: LRTQWSSLLVAPCVELNQPSPEC*DHRHVS Trigger: TGACACATGCCTATGATCCCAGCACTCAGGAGATGG...TTGGTTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CAA 90 bp | TTCAAAGGAAAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTaGCTTGTGGCTCCTTGCGTGGAATTGAACCAATGTGAGCTCAGC | + |
Preference number: 2 (lower is better) Translates to: FKGKMPYLLRTQWSS*LVAPCVELNQCELS Trigger: GCTGAGCTCACATTGGTTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCCTTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
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3UTR-3UTR TCA 90 bp | TCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCTGGCTTGGGAGTCATCCCTGGTaGAAATTTGGCGTCAGTTCA | + |
Preference number: 2 (lower is better) Translates to: SSSHRTISMGLDLMGSWLGSHPW*KFGVSS Trigger: TGAACTGACGCCAAATTTTCACCAGGGATGACTCCC...AAGCCAGGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR-3UTR GCA 90 bp | TCTTACAGGATTGAACACATCTATGAGCACAGGATGGGTGGCATAGCTTATGTTCACAGTGTGGAGGTTTaGTCTTGTGGGGCTGCAGCT | + |
Preference number: 2 (lower is better) Translates to: SYRIEHIYEHRMGGIAYVHSVEV*SCGAAA Trigger: AGCTGCAGCCCCACAAGAGCAAACCTCCACACTGTG...AACATAAGCTATGCCACCCATCCTGTGCTCATAGATGTGTTCAATCCTGTAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR-3UTR TCA 90 bp | TTGAACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTGTGCTGACGTGGAGTTaGGAGGAGAGTGAGAAAAGG | + |
Preference number: 2 (lower is better) Translates to: LNQCELSNPRLPYLQYLSVLTWS*EESEKR Trigger: CCTTTTCTCACTCTCCTCTCAACTCCACGTCAGCAC...AGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220904.2 |
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3UTR-3UTR GCA 90 bp | GGTTTGCATTTAGAACAGGCCCCAAAAGTAAATTTGGAGAGCCAAGGAAAGAAACTCAAACTCCCAGTCTaGCTGCCTCCATCTCCTGAG | + |
Preference number: 2 (lower is better) Translates to: GLHLEQAPKVNLESQGKKLKLPV*LPPSPE Trigger: CTCAGGAGATGGAGGCAGGCAGACTGGGAGTTTGAG...TTTCTTTCCTTGGCTCTCCAAATTTACTTTTGGGGCCTGTTCTAAATGCAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR-3UTR CCA 90 bp | AGTTTAATCACTTCAAAATATAACATGTCCCCAGGAGGTTCCAACACACACACAAGGGACTTGGGGACATaGGTAGGCCAAGGACCCTTC | + |
Preference number: 2 (lower is better) Translates to: SLITSKYNMSPGGSNTHTRDLGT*VGQGPF Trigger: GAAGGGTCCTTGGCCTACCCATGTCCCCAAGTCCCT...TGTGTGTGTGTTGGAACCTCCTGGGGACATGTTATATTTTGAAGTGATTAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CAA 90 bp | AACACCCTCGAGGATCTGAACAAAACCTTCCCAAGGAATCACAAGTaGTTCTCCCTTCTCAACACAAAACCGGTCTTCATTTGTTGCCGT | + |
Preference number: 2 (lower is better) Translates to: NTLEDLNKTFPRNHK*FSLLNTKPVFICCR Trigger: ACGGCAACAAATGAAGACCGGTTTTGTGTTGAGAAGGGAGAACAACTTGTGATTCCTTGGGAAGGTTTTGTTCAGATCCTCGAGGGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR-3UTR GCA 90 bp | TACAGGAAAGGGATAGAAAGGGACCTGACAAAGTTCAACCTAAAGGGCACTCCCGGGGCAAAGTCTGTTTaGAAAGAGTTATCAAGGGAT | + |
Preference number: 2 (lower is better) Translates to: YRKGIERDLTKFNLKGTPGAKSV*KELSRD Trigger: ATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCC...GGGAGTGCCCTTTAGGTTGAACTTTGTCAGGTCCCTTTCTATCCCTTTCCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR-3UTR GCA 90 bp | ATTTGTTCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCTTAAGGCAAGACAATTaGCCTCTCTGCCCAGAGGGA | + |
Preference number: 2 (lower is better) Translates to: ICSSSHRTISMGLDLMGSLRQDN*PLCPEG Trigger: TCCCTCTGGGCAGAGAGGGCAATTGTCTTGCCTTAA...GGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGAACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR-3UTR CCA 90 bp | ACAAAGTTCAACCTAAAGGGCACTCCCACAGCCTGGCTCTATGAATGCATAAAAAATATACTTGGGAAATaGAGGGAAGGGGTCCCCAAG | + |
Preference number: 2 (lower is better) Translates to: TKFNLKGTPTAWLYECIKNILGK*REGVPK Trigger: CTTGGGGACCCCTTCCCTCCATTTCCCAAGTATATT...TTTTATGCATTCATAGAGCCAGGCTGTGGGAGTGCCCTTTAGGTTGAACTTTGT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR CAA 90 bp | GCAATTCATGGTGGGATAAGAAAGAACCATCCCTGTGAGATACAGTaGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCATTT | + |
Preference number: 2 (lower is better) Translates to: AIHGGIRKNHPCEIQ*NRMDRRMKPAGFAF Trigger: AAATGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAACTGTATCTCACAGGGATGGTTCTTTCTTATCCCACCATGAATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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3UTR-3UTR TCA 90 bp | AGGGTGTTATATATCCTAGACTGGCCTCAAATTCACTATGTAGCTGAGGATGACATCCCAATACCACACTaGAGAGCTTGTCTGTCTCCT | + |
Preference number: 2 (lower is better) Translates to: RVLYILDWPQIHYVAEDDIPIPH*RACLSP Trigger: AGGAGACAGACAAGCTCTTCAGTGTGGTATTGGGAT...GTCATCCTCAGCTACATAGTGAATTTGAGGCCAGTCTAGGATATATAACACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR-3UTR GCA 90 bp | TACAGGAAAGGGATAGAAAGGGACCTGACAAAGTTCAACCTAAAGGGCACTCCCAGGCTACAAATACAGTaGATCTTTAAGACAAGGGAG | + |
Preference number: 2 (lower is better) Translates to: YRKGIERDLTKFNLKGTPRLQIQ*IFKTRE Trigger: CTCCCTTGTCTTAAAGATGCACTGTATTTGTAGCCT...GGGAGTGCCCTTTAGGTTGAACTTTGTCAGGTCCCTTTCTATCCCTTTCCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR-3UTR GCA 90 bp | ACAAAGTTCAACCTAAAGGGCACTCCCACAGCCTGGCTCTATGAATGCATAAAACTGTTTCTACATGCATaGAAAATAAGAGGCGGGGCA | + |
Preference number: 2 (lower is better) Translates to: TKFNLKGTPTAWLYECIKLFLHA*KIRGGA Trigger: TGCCCCGCCTCTTATTTTGCATGCATGTAGAAACAG...TTTTATGCATTCATAGAGCCAGGCTGTGGGAGTGCCCTTTAGGTTGAACTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR-3UTR CCA 90 bp | CAACAAAATCCACCTGTGCAAAGAAATCAGAGAACTGTGCAGTTGTGCGACTTTCGTTGGGGGACCTTATaGCACCTGTGGTTTATAAAC | + |
Preference number: 2 (lower is better) Translates to: QQNPPVQRNQRTVQLCDFRWGTL*HLWFIN Trigger: GTTTATAAACCACAGGTGCCATAAGGTCCCCCAACG...AAAGTCGCACAACTGCACAGTTCTCTGATTTCTTTGCACAGGTGGATTTTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CAA 90 bp | CTTATTCTCTTGTCTTTGACAGTTCTTTTACACACCAGCTTCCAGTaGAGTGTGACATCCCAATACCACACTGAAGAGCTTGTCTGTCTC | + |
Preference number: 2 (lower is better) Translates to: LILLSLTVLLHTSFQ*SVTSQYHTEELVCL Trigger: GAGACAGACAAGCTCTTCAGTGTGGTATTGGGATGTCACACTCAACTGGAAGCTGGTGTGTAAAAGAACTGTCAAAGACAAGAGAATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR CAA 90 bp | CAAGAGAAGGGTCCCGACAATAACCTCAAAGAGCATAACATGAATTaGAAACTTAACACCCTCGAGGATCTGAACAAAACCTTCCCAAGG | + |
Preference number: 2 (lower is better) Translates to: QEKGPDNNLKEHNMN*KLNTLEDLNKTFPR Trigger: CCTTGGGAAGGTTTTGTTCAGATCCTCGAGGGTGTTAAGTTTCAAATTCATGTTATGCTCTTTGAGGTTATTGTCGGGACCCTTCTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR-3UTR CCA 90 bp | AGTTTAATCACTTCAAAATATAACATGTCCCCAGGAGGTTCCAACACACACACACAGGCTCTCAGCCTGTaGGTGTTTGTTTTGAACCAG | + |
Preference number: 2 (lower is better) Translates to: SLITSKYNMSPGGSNTHTQALSL*VFVLNQ Trigger: CTGGTTCAAAACAAACACCCACAGGCTGAGAGCCTG...TGTGTGTGTGTTGGAACCTCCTGGGGACATGTTATATTTTGAAGTGATTAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR-3UTR TCA 90 bp | CTTACCCCAACTTCCATCCTGACAAACCACAACCAGTTCCTGAATCCTATACAGTCTATTCTAGAACAATaGTTTCCACTTCCTAGCACA | + |
Preference number: 2 (lower is better) Translates to: LTPTSILTNHNQFLNPIQSILEQ*FPLPST Trigger: TGTGCTAGGAAGTGGAAATCATTGTTCTAGAATAGA...CTGTATAGGATTCAGGAACTGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR-3UTR GCA 90 bp | AAAGGAAAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTTGCAAAGGTTTAAAATaGTCGTTAATACTGCTGTCC | + |
Preference number: 2 (lower is better) Translates to: KGKMPYLLRTQWSSLLVACKGLK*SLILLS Trigger: GGACAGCAGTATTAACGAGCATTTTAAACCTTTGCA...AGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR-3UTR TCA 90 bp | TCTTACAGGATTGAACACATCTATGAGCACAGGATGGGTGGCATAGCTTATGTTAACAACATTGACATTTaGGGAGCTCTAATGACTGAC | + |
Preference number: 2 (lower is better) Translates to: SYRIEHIYEHRMGGIAYVNNIDI*GALMTD Trigger: GTCAGTCATTAGAGCTCCTCAAATGTCAATGTTGTT...AACATAAGCTATGCCACCCATCCTGTGCTCATAGATGTGTTCAATCCTGTAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR-3UTR CCA 90 bp | AGGCTGCCATATTTACAGTATCTATCTACACTTAACAGCCAAGAACTAATAACACTCTCCACCACCGGATaGCATGTATCTTTCCTCATC | + |
Preference number: 2 (lower is better) Translates to: RLPYLQYLSTLNSQELITLSTTG*HVSFLI Trigger: GATGAGGAAAGATACATGCCATCCGGTGGTGGAGAG...TGTTATTAGTTCTTGGCTGTTAAGTGTAGATAGATACTGTAAATATGGCAGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR-3UTR TCA 90 bp | ATTTGTTCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCTACAGACCTTGGGAATaGAGAGTTAAAAAGTTTCCA | + |
Preference number: 2 (lower is better) Translates to: ICSSSHRTISMGLDLMGSYRPWE*RVKKFP Trigger: TGGAAACTTTTTAACTCTTCATTCCCAAGGTCTGTA...GGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGAACAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR-3UTR GCA 90 bp | ATTTGTTCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCCTTGCAATCCACCACTaGATTTTTCTATTATATTCC | + |
Preference number: 2 (lower is better) Translates to: ICSSSHRTISMGLDLMGSLAIHH*IFLLYS Trigger: GGAATATAATAGAAAAATGCAGTGGTGGATTGCAAG...GGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGAACAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR-3UTR CCA 90 bp | AGTTTAATCACTTCAAAATATAACATGTCCCCAGGAGGTTCCAACACACACACAACCTTATGGCACCTGTaGTTTATAAACAGCTTTAGT | + |
Preference number: 2 (lower is better) Translates to: SLITSKYNMSPGGSNTHTTLWHL*FINSFS Trigger: ACTAAAGCTGTTTATAAACCACAGGTGCCATAAGGT...TGTGTGTGTGTTGGAACCTCCTGGGGACATGTTATATTTTGAAGTGATTAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR-3UTR GCA 90 bp | CATGGCCACTTGCAATCCACCACTGCATTTTTCTATTATATTCCTTGGTACTTTTATTCTGAGCTTCCATaGAGTGGTATTTCTATGTTA | + |
Preference number: 2 (lower is better) Translates to: HGHLQSTTAFFYYIPWYFYSELP*SGISML Trigger: TAACATAGAAATACCACTGCATGGAAGCTCAGAATA...AAAGTACCAAGGAATATAATAGAAAAATGCAGTGGTGGATTGCAAGTGGCCATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR CCA 72 bp | TTTAGGGGAGGGGGTTGTTGGAGCTGCTGGGTGTGGTaGCTCCTCTTTCCCAGCGAGCGAGCGGGAGGCTGC | + |
Preference number: 3 (lower is better) Translates to: FRGGGCWSCWVW*LLFPSERAGGC Trigger: GCAGCCTCCCGCTCGCTCGCTGGGAAAGAGGAGCCACCACACCCAGCAGCTCCAACAACCCCCTCCCCTAAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR CCA 72 bp | GAACACTTCTTTAGGGGAGGGGGTTGTTGGAGCTGCTaGGTGTGGTGGCTCCTCTTTCCCAGCGAGCGAGCG | + |
Preference number: 3 (lower is better) Translates to: EHFFRGGGCWSC*VWWLLFPSERA Trigger: CGCTCGCTCGCTGGGAAAGAGGAGCCACCACACCCAGCAGCTCCAACAACCCCCTCCCCTAAAGAAGTGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR GCA 72 bp | TCCAGGCCGCAGTCTTCCTCCTCTCTGTCGGGTGGGTaGAGCTCTCTCCACCACCGGATGGCATGTATCTTT | + |
Preference number: 3 (lower is better) Translates to: SRPQSSSSLSGG*SSLHHRMACIF Trigger: AAAGATACATGCCATCCGGTGGTGGAGAGAGCTGCACCCACCCGACAGAGAGGAGGAAGACTGCGGCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR TCA 72 bp | AGGCACCAATGGCCACCTGCACCATCTAGAGAGGTGTaGTTTCACAGAGGACGATGGGCAGGGGAAGAGAGA | + |
Preference number: 3 (lower is better) Translates to: RHQWPPAPSREV*FHRGRWAGEER Trigger: TCTCTCTTCCCCTGCCCATCGTCCTCTGTGAAATCACACCTCTCTAGATGGTGCAGGTGGCCATTGGTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR GCA 72 bp | CCATGCTACAGCCCTTACTGTGGTGACCCTTCAACATaGAGAGGCTGGGAGGGGCTGTACAGGAAAGGGATA | + |
Preference number: 3 (lower is better) Translates to: PCYSPYCGDPST*RGWEGLYRKGI Trigger: TATCCCTTTCCTGTACAGCCCCTCCCAGCCTCTGCATGTTGAAGGGTCACCACAGTAAGGGCTGTAGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR CCA 72 bp | CCAGACCCCAGAGTTTCTGATCCAGTGGGTCTGGGTTaGAGCCTAGGAATCCACACTGGTAAGACTTCTGGG | + |
Preference number: 3 (lower is better) Translates to: PDPRVSDPVGLG*SLGIHTGKTSG Trigger: CCCAGAAGTCTTACCAGTGTGGATTCCTAGGCTCCAACCCAGACCCACTGGATCAGAAACTCTGGGGTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CCA 72 bp | AGCCCTTACTGTGGTGACCCTTCAACATGCAGAGGCTaGGAGGGGCTGTACAGGAAAGGGATAGAAAGGGAC | + |
Preference number: 3 (lower is better) Translates to: SPYCGDPSTCRG*EGLYRKGIERD Trigger: GTCCCTTTCTATCCCTTTCCTGTACAGCCCCTCCCAGCCTCTGCATGTTGAAGGGTCACCACAGTAAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR TCA 72 bp | AGATGGCTTCTATCCATGCTACAGCCCTTACTGTGGTaGCCCTTCAACATGCAGAGGCTGGGAGGGGCTGTA | + |
Preference number: 3 (lower is better) Translates to: RWLLSMLQPLLW*PFNMQRLGGAV Trigger: TACAGCCCCTCCCAGCCTCTGCATGTTGAAGGGTCACCACAGTAAGGGCTGTAGCATGGATAGAAGCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR CCA 72 bp | GGGGACATGGGTAGGCCAAGGACCCTTCTTGGCTCCTaGGTCCTGAGTTTGGACACTCAAAATCCAAATCCT | + |
Preference number: 3 (lower is better) Translates to: GDMGRPRTLLGS*VLSLDTQNPNP Trigger: AGGATTTGGATTTTGAGTGTCCAAACTCAGGACCCAGGAGCCAAGAAGGGTCCTTGGCCTACCCATGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR CCA 72 bp | GCAAGGCGTGGAGGAGTGCAGGTAACTGTAGTCCGTTaGGGGACCTTATGGCACCTGTGGTTTATAAACAGC | + |
Preference number: 3 (lower is better) Translates to: ARRGGVQVTVVR*GTLWHLWFINS Trigger: GCTGTTTATAAACCACAGGTGCCATAAGGTCCCCCAACGGACTACAGTTACCTGCACTCCTCCACGCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR TCA 72 bp | AGAGAACTGTGCAGTTGTGCGACTTTGGTGCTAGCCTaGGCTCAGGGAACTTTGCGAGGTGGGTTTTCTGGA | + |
Preference number: 3 (lower is better) Translates to: RELCSCATLVLA*AQGTLRGGFSG Trigger: TCCAGAAAACCCACCTCGCAAAGTTCCCTGAGCTCAGGCTAGCACCAAAGTCGCACAACTGCACAGTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR CCA 72 bp | TCTAAGTCCAGCAGCCACACCCCAGGGATGCAGGGATaGACAACGGTAGAGGCTACAAATACAGTGCATCTT | + |
Preference number: 3 (lower is better) Translates to: SKSSSHTPGMQG*TTVEATNTVHL Trigger: AAGATGCACTGTATTTGTAGCCTCTACCGTTGTCCATCCCTGCATCCCTGGGGTGTGGCTGCTGGACTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR-3UTR CAA 90 bp | GCTGTGGGGAGGCTTGGCTGTGCTAGATCAATGCTCATTCATAGGCCACCAGCTCTGTCTGACTATAGCTaGCTTGAGAGGAGAGTGAGA | + |
Preference number: 3 (lower is better) Translates to: AVGRLGCARSMLIHRPPALSDYS*LERRVR Trigger: TCTCACTCTCCTCTCAAGCAAGCTATAGTCAGACAG...AGCTGGTGGCCTATGAATGAGCATTGATCTAGCACAGCCAAGCCTCCCCACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR TCA 72 bp | AAAACATGGATCACTAGGTCCAGACCCCAGAGTTTCTaGTCCAGTGGGTCTGGGTTGGAGCCTAGGAATCCA | + |
Preference number: 3 (lower is better) Translates to: KTWITRSRPQSF*SSGSGLEPRNP Trigger: TGGATTCCTAGGCTCCAACCCAGACCCACTGGATCAGAAACTCTGGGGTCTGGACCTAGTGATCCATGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR TCA 72 bp | AGTGGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAATTaGACCAATGTGAGCTCAGCAACCCAAGGCTGCCAT | + |
Preference number: 3 (lower is better) Translates to: SGVLCLWLLAWN*TNVSSATQGCH Trigger: ATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
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3UTR TCA 72 bp | TGTTTGCAAAGAGTTATCAAGGGATACACCCTGCCATaGTCTAAGTCCAGCAGCCACACCCCAGGGATGCAG | + |
Preference number: 3 (lower is better) Translates to: CLQRVIKGYTLP*SKSSSHTPGMQ Trigger: CTGCATCCCTGGGGTGTGGCTGCTGGACTTAGATCATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR GCA 72 bp | CTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTaGGTGGAATTGAACCAATGTGAGCTCAGCAACCCA | + |
Preference number: 3 (lower is better) Translates to: LRTQWSSLLVAP*VELNQCELSNP Trigger: TGGGTTGCTGAGCTCACATTGGTTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
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3UTR-3UTR CAA 90 bp | GCGGGGCAAAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTGCCATGATCTTGTGGGGCTGCAGCTaGGGCAACAACATTGACATT | + |
Preference number: 3 (lower is better) Translates to: AGQSLFAKSYQGIHPAMILWGCS*GNNIDI Trigger: AATGTCAATGTTGTTGCCCAAGCTGCAGCCCCACAA...GATCATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR TCA 72 bp | GTGTCACCATGCCAGGTTTATACAGCCCTGGAAGCTTaGACCAAGGGCTTTGTGTATGCTAAGCAAACCCTC | + |
Preference number: 3 (lower is better) Translates to: VSPCQVYTALEA*TKGFVYAKQTL Trigger: GAGGGTTTGCTTAGCATACACAAAGCCCTTGGTTCAAGCTTCCAGGGCTGTATAAACCTGGCATGGTGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR GCA 72 bp | AAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTaGCATGATCTAAGTCCAGCAGCCACACCCCAGGGA | + |
Preference number: 3 (lower is better) Translates to: KSVCKELSRDTP*HDLSPAATPQG Trigger: TCCCTGGGGTGTGGCTGCTGGACTTAGATCATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR-3UTR CAA 90 bp | CGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAACTTGAACCAAGGGCTTaGTGTATGCTAAGCAAACCC | + |
Preference number: 3 (lower is better) Translates to: RLPLTNQTYPNFHPDKPQLEPRA*CMLSKP Trigger: GGGTTTGCTTAGCATACACAAAGCCCTTGGTTCAAG...TTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR CCA 72 bp | GGAGTGCAGGTAACTGTAGTCCGTTGGGGGACCTTATaGCACCTGTGGTTTATAAACAGCTTTAGTAACGAG | + |
Preference number: 3 (lower is better) Translates to: GVQVTVVRWGTL*HLWFINSFSNE Trigger: CTCGTTACTAAAGCTGTTTATAAACCACAGGTGCCATAAGGTCCCCCAACGGACTACAGTTACCTGCACTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR CCA 72 bp | ATAGGCATGTGTCACCATGCCAGGTTTATACAGCCCTaGAAGCTTGAACCAAGGGCTTTGTGTATGCTAAGC | + |
Preference number: 3 (lower is better) Translates to: IGMCHHARFIQP*KLEPRALCMLS Trigger: GCTTAGCATACACAAAGCCCTTGGTTCAAGCTTCCAGGGCTGTATAAACCTGGCATGGTGACACATGCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR-3UTR CAA 90 bp | CTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAATTGAACCAACTGGTTAGTGAGAAATaGCTCACTGGTAGTGGTTTC | + |
Preference number: 3 (lower is better) Translates to: LRTQWSSLLVAPCVELNQLVSEK*LTGSGF Trigger: GAAACCACTACCAGTGAGCAATTTCTCACTAACCAG...TTGGTTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR-3UTR CAA 90 bp | CTGCCCAGAGGGAGGAGGGAGCTTAGATTAGAGCAGCTTTTCTGTTTCTACATGTGGAAGGGAAGAAAGTaGCCTATTCTTCATAGGATC | + |
Preference number: 3 (lower is better) Translates to: LPRGRRELRLEQLFCFYMWKGRK*PILHRI Trigger: GATCCTATGAAGAATAGGCAACTTTCTTCCCTTCCA...CATGTAGAAACAGAAAAGCTGCTCTAATCTAAGCTCCCTCCTCCCTCTGGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR TCA 72 bp | GAAGGTCTCGGGACTACCGATGAGGGAACTTGTCAATaGGCAGTGCTGTGTAAGACATGCTTCCTAAAGATA | + |
Preference number: 3 (lower is better) Translates to: EGLGTTDEGTCQ*AVLCKTCFLKI Trigger: TATCTTTAGGAAGCATGTCTTACACAGCACTGCTCATTGACAAGTTCCCTCATCGGTAGTCCCGAGACCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR TCA 72 bp | TTTGCTTGTGGCTCCTTGCGTGGAATTGAACCAATGTaGGCTCAGCAACCCAAGGCTGCCATATTTACAGTA | + |
Preference number: 3 (lower is better) Translates to: FACGSLRGIEPM*AQQPKAAIFTV Trigger: TACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTTCAATTCCACGCAAGGAGCCACAAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
||
3UTR CCA 72 bp | TTCAAAGGAAAAATGCCCTACCTTCTGAGGACACAGTaGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAATTG | + |
Preference number: 3 (lower is better) Translates to: FKGKMPYLLRTQ*SSLLVAPCVEL Trigger: CAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCCTTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
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3UTR-3UTR CAA 90 bp | AGGGTGTTATATATCCTAGACTGGCCTCAAATTCACTATGTAGCTGAGGATGACGGAAAACAATCCACTTaGGAAAGGAGCCCCCAAGAG | + |
Preference number: 3 (lower is better) Translates to: RVLYILDWPQIHYVAEDDGKQST*ERSPQE Trigger: CTCTTGGGGGCTCCTTTCCAAAGTGGATTGTTTTCC...GTCATCCTCAGCTACATAGTGAATTTGAGGCCAGTCTAGGATATATAACACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR-3UTR CAA 90 bp | AACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACACCCTGTGAGATACAGTaGAACAGAATGGACAGACGG | + |
Preference number: 3 (lower is better) Translates to: NQCELSNPRLPYLQYLSTPCEIQ*NRMDRR Trigger: CCGTCTGTCCATTCTGTTCAACTGTATCTCACAGGG...TGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
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3UTR-3UTR CAA 90 bp | TACAGGAAAGGGATAGAAAGGGACCTGACAAAGTTCAACCTAAAGGGCACTCCCCACAGTCTTACAGGATaGAACACATCTATGAGCACA | + |
Preference number: 3 (lower is better) Translates to: YRKGIERDLTKFNLKGTPHSLTG*NTSMST Trigger: TGTGCTCATAGATGTGTTCAATCCTGTAAGACTGTG...GGGAGTGCCCTTTAGGTTGAACTTTGTCAGGTCCCTTTCTATCCCTTTCCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR-3UTR CAA 90 bp | TCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCTGGCTTTACAGCTTCTTCTGCTaGCTTCTGAACCTGACTACA | + |
Preference number: 3 (lower is better) Translates to: SSSHRTISMGLDLMGSWLYSFFC*LLNLTT Trigger: TGTAGTCAGGTTCAGAAGCAAGCAGAAGAAGCTGTA...AAGCCAGGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR-3UTR CAA 90 bp | ATTTGTTCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCCCTTCCAGAATATACTaGGGAAATGGAGGGAAGGGG | + |
Preference number: 3 (lower is better) Translates to: ICSSSHRTISMGLDLMGSPSRIY*GNGGKG Trigger: CCCCTTCCCTCCATTTCCCAAGTATATTCTGGAAGG...GGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGAACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR TCA 72 bp | ATAATCCATCTTCATAGTCTCCAACACGTCTCCCTCTaGCCAACCAAACTTACCCCAACTTCCATCCTGACA | + |
Preference number: 3 (lower is better) Translates to: IIHLHSLQHVSL*PTKLTPTSILT Trigger: TGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACGTGTTGGAGACTATGAAGATGGATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
||
3UTR TCA 72 bp | TTGTGGGGCTGCAGCTTGGGCAACAACATTGACATTTaGGGAGCTCTAATGACTGACCTTCTATCAAGAGAA | + |
Preference number: 3 (lower is better) Translates to: LWGCSLGNNIDI*GALMTDLLSRE Trigger: TTCTCTTGATAGAAGGTCAGTCATTAGAGCTCCTCAAATGTCAATGTTGTTGCCCAAGCTGCAGCCCCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR TCA 72 bp | GTTCAACCTAAAGGGCACTCCCACAGCCTGGCTCTATaGATGCATAAAAGCCTTCCAGAATATACTTGGGAA | + |
Preference number: 3 (lower is better) Translates to: VQPKGHSHSLAL*MHKSLPEYTWE Trigger: TTCCCAAGTATATTCTGGAAGGCTTTTATGCATTCATAGAGCCAGGCTGTGGGAGTGCCCTTTAGGTTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR GCA 72 bp | TTGGACACTCAAAATCCAAATCCTATTGTAGATTGTTaGCCCCCTTCCCTCCCAGTTGCTGTGGGAGAAAAA | + |
Preference number: 3 (lower is better) Translates to: LDTQNPNPIVDC*PPSLPVAVGEK Trigger: TTTTTCTCCCACAGCAACTGGGAGGGAAGGGGGGCAACAATCTACAATAGGATTTGGATTTTGAGTGTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR GCA 72 bp | GATGCCAATCACGTCCTTGGCTATCCTCAAGGCAAATaGTTTTGTTTAAAGAGCAGCCATGGAGATCGTTTC | + |
Preference number: 3 (lower is better) Translates to: DANHVLGYPQGK*FCLKSSHGDRF Trigger: GAAACGATCTCCATGGCTGCTCTTTAAACAAAAGCATTTGCCTTGAGGATAGCCAAGGACGTGATTGGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR GCA 72 bp | CATGCATGCAAAATAAGAGGCGGGGCAAAGTCTGTTTaGAAAGAGTTATCAAGGGATACACCCTGCCATGAT | + |
Preference number: 3 (lower is better) Translates to: HACKIRGGAKSV*KELSRDTPCHD Trigger: ATCATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGCCTCTTATTTTGCATGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR GCA 72 bp | AACCTAAAGGGCACTCCCACAGCCTGGCTCTATGAATaGATAAAAGCCTTCCAGAATATACTTGGGAAATGG | + |
Preference number: 3 (lower is better) Translates to: NLKGTPTAWLYE*IKAFQNILGKW Trigger: CCATTTCCCAAGTATATTCTGGAAGGCTTTTATGCATTCATAGAGCCAGGCTGTGGGAGTGCCCTTTAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR CCA 72 bp | CTGAGTCAGAGTATGTTGAAGGAAAACAATCCACTTTaGAAAGGAGCCCCCAAGAGCCCATTATTCCTGTTG | + |
Preference number: 3 (lower is better) Translates to: LSQSMLKENNPL*KGAPKSPLFLL Trigger: CAACAGGAATAATGGGCTCTTGGGGGCTCCTTTCCAAAGTGGATTGTTTTCCTTCAACATACTCTGACTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR CCA 72 bp | TCCTCAAGGCAAATGCTTTTGTTTAAAGAGCAGCCATaGAGATCGTTTCTGACCAAATGCAGAGGCAAGAAC | + |
Preference number: 3 (lower is better) Translates to: SSRQMLLFKEQP*RSFLTKCRGKN Trigger: GTTCTTGCCTCTGCATTTGGTCAGAAACGATCTCCATGGCTGCTCTTTAAACAAAAGCATTTGCCTTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR CCA 72 bp | CTGACAAAGTTCAACCTAAAGGGCACTCCCACAGCCTaGCTCTATGAATGCATAAAAGCCTTCCAGAATATA | + |
Preference number: 3 (lower is better) Translates to: LTKFNLKGTPTA*LYECIKAFQNI Trigger: TATATTCTGGAAGGCTTTTATGCATTCATAGAGCCAGGCTGTGGGAGTGCCCTTTAGGTTGAACTTTGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR CCA 72 bp | AAGGAGATAAGAGAGAATGAGTGTGTAACCTACATTTaGGTCTCTGGCAGATGGCTTCTATCCATGCTACAG | + |
Preference number: 3 (lower is better) Translates to: KEIRENECVTYI*VSGRWLLSMLQ Trigger: CTGTAGCATGGATAGAAGCCATCTGCCAGAGACCCAAATGTAGGTTACACACTCATTCTCTCTTATCTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR TCA 72 bp | GCTCTCAGCCTGTGGGTGTTTGTTTTGAACCAGGGATaGGCCATGTTACAGAAGATGGAGTTGATAAATTAT | + |
Preference number: 3 (lower is better) Translates to: ALSLWVFVLNQG*AMLQKMELINY Trigger: ATAATTTATCAACTCCATCTTCTGTAACATGGCTCATCCCTGGTTCAAAACAAACACCCACAGGCTGAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR TCA 72 bp | TTTCTTTTTGGTTCAAAGGAAAAATGCCCTACCTTCTaGGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTT | + |
Preference number: 3 (lower is better) Translates to: FLFGSKEKCPTF*GHSGVLCLWLL Trigger: AAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCCTTTGAACCAAAAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
||
3UTR TCA 72 bp | AGAAGCTTGAGTAGAAACCAAGGAGATAAGAGAGAATaGGTGTGTAACCTACATTTGGGTCTCTGGCAGATG | + |
Preference number: 3 (lower is better) Translates to: RSLSRNQGDKRE*VCNLHLGLWQM Trigger: CATCTGCCAGAGACCCAAATGTAGGTTACACACTCATTCTCTCTTATCTCCTTGGTTTCTACTCAAGCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR GCA 72 bp | ACGGAGCTAGGAAATATCATCATACACTTTGGTACATaGACAGGGTGCTCAAGCTGCTTTTCTTTTGCTCTA | + |
Preference number: 3 (lower is better) Translates to: TELGNIIIHFGT*TGCSSCFSFAL Trigger: TAGAGCAAAAGAAAAGCAGCTTGAGCACCCTGTGCATGTACCAAAGTGTATGATGATATTTCCTAGCTCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR CCA 72 bp | GTAACTGTAGTCCGTTGGGGGACCTTATGGCACCTGTaGTTTATAAACAGCTTTAGTAACGAGTATTCCAAA | + |
Preference number: 3 (lower is better) Translates to: VTVVRWGTLWHL*FINSFSNEYSK Trigger: TTTGGAATACTCGTTACTAAAGCTGTTTATAAACCACAGGTGCCATAAGGTCCCCCAACGGACTACAGTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR-3UTR CAA 90 bp | TTACCCGATCTTTATGAGAAGAGTTTCTATGCCTTTTCAGAGAAATGGAAGCTGACCGGTCTTCATTTGTaGCCGTCAGTAGTAGTGACA | + |
Preference number: 3 (lower is better) Translates to: LPDLYEKSFYAFSEKWKLTGLHL*PSVVVT Trigger: TGTCACTACTACTGACGGCAACAAATGAAGACCGGT...CAGCTTCCATTTCTCTGAAAAGGCATAGAAACTCTTCTCATAAAGATCGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
3UTR TCA 72 bp | GGTGACATTAACATTGCTTGTCTGACACACACATTCTaGGCAAATCTCTGTTCTGAAATGACGTTCCCTTCT | + |
Preference number: 3 (lower is better) Translates to: GDINIACLTHTF*ANLCSEMTFPS Trigger: AGAAGGGAACGTCATTTCAGAACAGAGATTTGCTCAGAATGTGTGTGTCAGACAAGCAATGTTAATGTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR GCA 72 bp | ATCATACACTTTGGTACATGCACAGGGTGCTCAAGCTaGTTTTCTTTTGCTCTAGTTTGGTTTGACTTCTCT | + |
Preference number: 3 (lower is better) Translates to: IIHFGTCTGCSS*FSFALVWFDFS Trigger: AGAGAAGTCAAACCAAACTAGAGCAAAAGAAAAGCAGCTTGAGCACCCTGTGCATGTACCAAAGTGTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR-3UTR CAA 90 bp | ACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGAGAAGCAACTCAACTCTaGGTTAATAGAGGAAGCAGA | + |
Preference number: 3 (lower is better) Translates to: TVIRTTRFIEICGSQGTREATQL*VNRGSR Trigger: TCTGCTTCCTCTATTAACCAAGAGTTGAGTTGCTTC...TCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
||
3UTR CCA 72 bp | GACAGTGATAAGAACCACAAGATTTATAGAAATCTGTaGTTCACAGGGAACAAGACAAGAGGACTGAAAATG | + |
Preference number: 3 (lower is better) Translates to: DSDKNHKIYRNL*FTGNKTRGLKM Trigger: CATTTTCAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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3UTR TCA 72 bp | TTGTCTGACACACACATTCTGAGCAAATCTCTGTTCTaGAATGACGTTCCCTTCTCTCTTTTAGAAGAAAAA | + |
Preference number: 3 (lower is better) Translates to: LSDTHILSKSLF*NDVPFSLLEEK Trigger: TTTTTCTTCTAAAAGAGAGAAGGGAACGTCATTTCAGAACAGAGATTTGCTCAGAATGTGTGTGTCAGACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR TCA 72 bp | TTATGTGATGGCAGGGGATTTATTACCCGATCTTTATaGGAAGAGTTTCTATGCCTTTTCAGAGAAATGGAA | + |
Preference number: 3 (lower is better) Translates to: LCDGRGFITRSL*EEFLCLFREME Trigger: TTCCATTTCTCTGAAAAGGCATAGAAACTCTTCTCATAAAGATCGGGTAATAAATCCCCTGCCATCACATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR TCA 72 bp | AGAGATTGTAGATGCCAGCATAATAAAACACTACATTaGACCACACAGATTTATGATAAAACACGTAGAGGT | + |
Preference number: 3 (lower is better) Translates to: RDCRCQHNKTLH*TTQIYDKTRRG Trigger: ACCTCTACGTGTTTTATCATAAATCTGTGTGGTTCAATGTAGTGTTTTATTATGCTGGCATCTACAATCTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | TTGGAGCTGCTGGGTGTGGTGGCTCCTCTTTCCCAGCGAGCGAGCGGGAGGCTGTCAGGGGCACTCCTCTaGTGTGTGGGCTGTGATGAG | + |
Preference number: 4 (lower is better) Translates to: LELLGVVAPLSQRASGRLSGALL*CVGCDE Trigger: CTCATCACAGCCCACACAGCAGAGGAGTGCCCCTGA...CAGCCTCCCGCTCGCTCGCTGGGAAAGAGGAGCCACCACACCCAGCAGCTCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR CCA 90 bp | GCTGTGGGGAGGCTTGGCTGTGCTAGATCAATGCTCATTCATAGGCCACCAGCTGTCGTGCGGCGTACCTaGCGATCAGCCTGTGTTCTT | + |
Preference number: 4 (lower is better) Translates to: AVGRLGCARSMLIHRPPAVVRRT*RSACVL Trigger: AAGAACACAGGCTGATCGCCAGGTACGCCGCACGAC...AGCTGGTGGCCTATGAATGAGCATTGATCTAGCACAGCCAAGCCTCCCCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | CACAACTGCATGCAGAACACCAGGTGTTCAGGTAAGGCAATCACCACTCAGAAAGCTGGGGGAAGAGCGTaGGGAGCTTGCCCCCTGGGT | + |
Preference number: 4 (lower is better) Translates to: HNCMQNTRCSGKAITTQKAGGRA*GACPLG Trigger: ACCCAGGGGGCAAGCTCCCCACGCTCTTCCCCCAGC...TTTCTGAGTGGTGATTGCCTTACCTGAACACCTGGTGTTCTGCATGCAGTTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR CCA 90 bp | CGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAAGGCCTGCTGATGGTGTaGCTGGGGGAAGAGCGTGGG | + |
Preference number: 4 (lower is better) Translates to: RLPLTNQTYPNFHPDKPQGLLMV*LGEERG Trigger: CCCACGCTCTTCCCCCAGCCACACCATCAGCAGGCC...TTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | GTGATTTCACAGAGGACGATGGGCAGGGGAAGAGAGATGAACGTTAAGACACGCTTCTGCTGCCAGTCGTaGGGCGTACCTGGCGATCAG | + |
Preference number: 4 (lower is better) Translates to: VISQRTMGRGREMNVKTRFCCQS*GVPGDQ Trigger: CTGATCGCCAGGTACGCCGCACGACTGGCAGCAGAA...GCGTGTCTTAACGTTCATCTCTCTTCCCCTGCCCATCGTCCTCTGTGAAATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR GCA 90 bp | TCTCCAACACGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACTTCTGCTGCCAGTCGTaGGGCGTACCTGGCGATCAG | + |
Preference number: 4 (lower is better) Translates to: SPTRLPLTNQTYPNFHPDFCCQS*GVPGDQ Trigger: CTGATCGCCAGGTACGCCGCACGACTGGCAGCAGAA...GTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACGTGTTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | GGGCTTCAGAGTATGACCCAGCCCAACGGTCATGATGCCCCTATCTCCAGAAAATCAGGGGCACTCCTCTaGTGTGTGGGCTGTGATGAG | + |
Preference number: 4 (lower is better) Translates to: GLQSMTQPNGHDAPISRKSGALL*CVGCDE Trigger: CTCATCACAGCCCACACAGCAGAGGAGTGCCCCTGA...TTTTCTGGAGATAGGGGCATCATGACCGTTGGGCTGGGTCATACTCTGAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | CCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAATTGAACCAGTGAGGGAGTCCTaGGGGGTGTGCGTTGGTGTG | + |
Preference number: 4 (lower is better) Translates to: PSEDTVEFFACGSLRGIEPVRES*GVCVGV Trigger: CACACCAACGCACACCCCGCAGGACTCCCTCACTGG...TTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | GTGGGGAGGCTTGGCTGTGCTAGATCAATGCTCATTCATAGGCCACCAGCTTCGGCTACAGGACAGGGGTaGTTGAGTCTGGTCTCAGTG | + |
Preference number: 4 (lower is better) Translates to: VGRLGCARSMLIHRPPASATGQG*LSLVSV Trigger: CACTGAGACCAGACTCAAGCACCCCTGTCCTGTAGC...CGAAGCTGGTGGCCTATGAATGAGCATTGATCTAGCACAGCCAAGCCTCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222726.2 |
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3UTR CAA 72 bp | TCACCCACCTCCCTGACCACAATGCTGTGGGGAGGCTaGGCTGTGCTAGATCAATGCTCATTCATAGGCCAC | + |
Preference number: 4 (lower is better) Translates to: SPTSLTTMLWGG*AVLDQCSFIGH Trigger: GTGGCCTATGAATGAGCATTGATCTAGCACAGCCAAGCCTCCCCACAGCATTGTGGTCAGGGAGGTGGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
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CDS-3UTR TCA 90 bp | ATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAGGAGGGTCTGACATaGGCGTGTCCAAGAAGCCAT | + |
Preference number: 4 (lower is better) Translates to: MPYLLRTQWSSLLVAPCVEEGLT*ACPRSH Trigger: ATGGCTTCTTGGACACGCTCATGTCAGACCCTCCTC...CACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | AAAGGAAAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTTGGGGATCGGCCTGCTaGTGGTGTGGCTGGGGGAAG | + |
Preference number: 4 (lower is better) Translates to: KGKMPYLLRTQWSSLLVAWGSAC*WCGWGK Trigger: CTTCCCCCAGCCACACCATCAGCAGGCCGATCCCCA...AGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | GGTAGGTTTAATCATTTCTCAGAGGGACTTGGGGACATGGGTAGGCCAAGGACCGCTGGTCTGGGAACATaGGGTGCAAAGGTTCACGGC | + |
Preference number: 4 (lower is better) Translates to: GRFNHFSEGLGDMGRPRTAGLGT*GAKVHG Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGACCAGC...GGTCCTTGGCCTACCCATGTCCCCAAGTCCCTCTGAGAAATGATTAAACCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR CCA 90 bp | GTTTGCTCTTGTGGGGCTGCAGCTTGGGCAACAACATTGACATTTGAGGAGCTCGCTGGTCTGGGAACATaGGGTGCAAAGGTTCACGGC | + |
Preference number: 4 (lower is better) Translates to: VCSCGAAAWATTLTFEELAGLGT*GAKVHG Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGACCAGC...GAGCTCCTCAAATGTCAATGTTGTTGCCCAAGCTGCAGCCCCACAAGAGCAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | TTTTGTCTCGGCTACAGGACAGGGGTGCTTGAGTCTGGTCTCAGTGCTGACGTGCTTTTCAGGCTGGTCTaGGAACATGGGGTGCAAAGG | + |
Preference number: 4 (lower is better) Translates to: FCLGYRTGVLESGLSADVLFRLV*EHGVQR Trigger: CCTTTGCACCCCATGTTCCCAGACCAGCCTGAAAAG...CACGTCAGCACTGAGACCAGACTCAAGCACCCCTGTCCTGTAGCCGAGACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | GCTGTGGGGAGGCTTGGCTGTGCTAGATCAATGCTCATTCATAGGCCACCAGCTCCAGGTTTCCGGGAGTaGATTTGGGCTAGAAAAGCC | + |
Preference number: 4 (lower is better) Translates to: AVGRLGCARSMLIHRPPAPGFRE*IWARKA Trigger: GGCTTTTCTAGCCCAAATCCACTCCCGGAAACCTGG...AGCTGGTGGCCTATGAATGAGCATTGATCTAGCACAGCCAAGCCTCCCCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | CGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAACCAGGCGGGCCACGTTaGGTTCTATGTTTGGGTCCA | + |
Preference number: 4 (lower is better) Translates to: RLPLTNQTYPNFHPDKPQPGGPR*VLCLGP Trigger: TGGACCCAAACATAGAACTCAACGTGGCCCGCCTGG...TTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | GAGGCGGGGCAAAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTGCCATGGAGGAGGGTCTGACATaGGCGTGTCCAAGAAGCCAT | + |
Preference number: 4 (lower is better) Translates to: EAGQSLFAKSYQGIHPAMEEGLT*ACPRSH Trigger: ATGGCTTCTTGGACACGCTCATGTCAGACCCTCCTC...CATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | TCTCCAACACGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACCTCGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTT | + |
Preference number: 4 (lower is better) Translates to: SPTRLPLTNQTYPNFHPDLGGTM*AKLSGF Trigger: AAAGCCACTCAACTTGGCTCACATCGTGCCTCCGAG...GTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACGTGTTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | GGAAAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTCTTGCAGCTCCACCGTaGATGTACCCAGGTTTCCGG | + |
Preference number: 4 (lower is better) Translates to: GKMPYLLRTQWSSLLVAPLAAPP*MYPGFR Trigger: CCGGAAACCTGGGTACATTCACGGTGGAGCTGCAAG...AGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | GTGGGGAGGCTTGGCTGTGCTAGATCAATGCTCATTCATAGGCCACCAGCTTCGAGAGTGTGTCGTTCATaGTGGTTACAGGTCTCGGAG | + |
Preference number: 4 (lower is better) Translates to: VGRLGCARSMLIHRPPASRVCRS*WLQVSE Trigger: CTCCGAGACCTGTAACCAGCATGAACGACACACTCT...CGAAGCTGGTGGCCTATGAATGAGCATTGATCTAGCACAGCCAAGCCTCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | GCTCTCTCCACCACCGGATGGCATGTATCTTTCCTCATCTGTCTGACTATAGCTGAGGAGCCGGAGTTCTaGCAGCAAGGTTGGGTTCTG | + |
Preference number: 4 (lower is better) Translates to: ALSTTGWHVSFLICLTIAEEPEF*QQGWVL Trigger: CAGAACCCAACCTTGCTGGCAGAACTCCGGCTCCTC...AGCTATAGTCAGACAGATGAGGAAAGATACATGCCATCCGGTGGTGGAGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR GCA 90 bp | GCGGGGCAAAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTGCCATGATCGAGGAGCCGGAGTTCTaGCAGCAAGGTTGGGTTCTG | + |
Preference number: 4 (lower is better) Translates to: AGQSLFAKSYQGIHPAMIEEPEF*QQGWVL Trigger: CAGAACCCAACCTTGCTGGCAGAACTCCGGCTCCTC...GATCATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | GGGTGTGCAATTCATGGTGGGATAAGAAAGAACCATCCCTGTGAGATACAGTTGAGAGCGTGGGGAGCTTaGCCCCTGGGTCTTCAGGAG | + |
Preference number: 4 (lower is better) Translates to: GCAIHGGIRKNHPCEIQLRAWGA*PLGLQE Trigger: CTCCTGAAGACCCAGGGGGCAAGCTCCCCACGCTCT...CAACTGTATCTCACAGGGATGGTTCTTTCTTATCCCACCATGAATTGCACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR GCA 90 bp | TTCGATAGACGTGGGTGTGCAATTCATGGTGGGATAAGAAAGAACCATCCCTGTCCAGTGAGGGAGTCCTaGGGGGTGTGCGTTGGTGTG | + |
Preference number: 4 (lower is better) Translates to: FDRRGCAIHGGIRKNHPCPVRES*GVCVGV Trigger: CACACCAACGCACACCCCGCAGGACTCCCTCACTGG...ACAGGGATGGTTCTTTCTTATCCCACCATGAATTGCACACCCACGTCTATCGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | AGGAAAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCGCTGGTCTGGGAACATaGGGTGCAAAGGTTCACGGC | + |
Preference number: 4 (lower is better) Translates to: RKNALPSEDTVEFFACGSAGLGT*GAKVHG Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGACCAGC...GGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | GGAAAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTGTCGTGCGGCGTACCTaGCGATCAGCCTGTGTTCTT | + |
Preference number: 4 (lower is better) Translates to: GKMPYLLRTQWSSLLVAPVVRRT*RSACVL Trigger: AAGAACACAGGCTGATCGCCAGGTACGCCGCACGAC...AGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | TGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACACTTAACGCTGGGGGAAGAGCGTaGGGAGCTTGCCCCCTGGGT | + |
Preference number: 4 (lower is better) Translates to: CELSNPRLPYLQYLSTLNAGGRA*GACPLG Trigger: ACCCAGGGGGCAAGCTCCCCACGCTCTTCCCCCAGC...GTTAAGTGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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3UTR CAA 72 bp | AGCAAGGCGTGGAGGAGTGCAGGTAACTGTAGTCCGTaGGGGGACCTTATGGCACCTGTGGTTTATAAACAG | + |
Preference number: 4 (lower is better) Translates to: SKAWRSAGNCSP*GDLMAPVVYKQ Trigger: CTGTTTATAAACCACAGGTGCCATAAGGTCCCCCAACGGACTACAGTTACCTGCACTCCTCCACGCCTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR TCA 90 bp | CTGCCCAGAGGGAGGAGGGAGCTTAGATTAGAGCAGCTTTTCTGTTTCTACATGAGTTCAGCAGGAGACTaGTGGACTGCTCCACGTGGA | + |
Preference number: 4 (lower is better) Translates to: LPRGRRELRLEQLFCFYMSSAGD*WTAPRG Trigger: TCCACGTGGAGCAGTCCATCAGTCTCCTGCTGAACT...CATGTAGAAACAGAAAAGCTGCTCTAATCTAAGCTCCCTCCTCCCTCTGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
CDS-3UTR TCA 90 bp | ATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTGCGTGTCTTCAGGAGCTTCATaGGACCTTCCAACTGGACCA | + |
Preference number: 4 (lower is better) Translates to: MPYLLRTQWSSLLVAPCVSSGAS*DLPTGP Trigger: TGGTCCAGTTGGAAGGTCTCATGAAGCTCCTGAAGA...CACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR TCA 90 bp | CAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACACTTTGGGGATCGGCCTGCTaGTGGTGTGGCTGGGGGAAG | + |
Preference number: 4 (lower is better) Translates to: QCELSNPRLPYLQYLSTLWGSAC*WCGWGK Trigger: CTTCCCCCAGCCACACCATCAGCAGGCCGATCCCCA...AAGTGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | GAGGCGGGGCAAAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTGCCATGCCTTCAGGAGCTTCATaGGACCTTCCAACTGGACCA | + |
Preference number: 4 (lower is better) Translates to: EAGQSLFAKSYQGIHPAMPSGAS*DLPTGP Trigger: TGGTCCAGTTGGAAGGTCTCATGAAGCTCCTGAAGG...CATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | GGAAAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTGCTATGAGAACCTCCTaGATGGCCCCTCCAGAAGCA | + |
Preference number: 4 (lower is better) Translates to: GKMPYLLRTQWSSLLVAPAMRTS*MAPPEA Trigger: TGCTTCTGGAGGGGCCATGCAGGAGGTTCTCATAGC...AGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | CGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAATGTGCAAACGCCTCTTaGACATCTCCGCCTACCCCA | + |
Preference number: 4 (lower is better) Translates to: RLPLTNQTYPNFHPDKPQCANAS*TSPPTP Trigger: TGGGGTAGGCGGAGATGTGCAAGAGGCGTTTGCACA...TTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | ACACGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCAGCCCCCTGGGTTCCCTaGTTCAGTTCTTCTTCCTTC | + |
Preference number: 4 (lower is better) Translates to: TRLPLTNQTYPNFHPDKPAPWVP*FSSSSF Trigger: GAAGGAAGAAGAACTGAAGCAGGGAACCCAGGGGGC...TGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | CTGGGTTTGCATTTAGAACAGGCCCCAAAAGTAAATTTGGAGAGCCAAGGAAAGAGAGCGTGGGGAGCTTaGCCCCTGGGTTCCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: LGLHLEQAPKVNLESQGKRAWGA*PLGSLL Trigger: AAGCAGGGAACCCAGGGGGCAAGCTCCCCACGCTCT...CTTTCCTTGGCTCTCCAAATTTACTTTTGGGGCCTGTTCTAAATGCAAACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | CTGTGGGGAGGCTTGGCTGTGCTAGATCAATGCTCATTCATAGGCCACCAGCTTATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA | + |
Preference number: 4 (lower is better) Translates to: LWGGLAVLDQCSFIGHQLMLFCR*RVGCDP Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...AAGCTGGTGGCCTATGAATGAGCATTGATCTAGCACAGCCAAGCCTCCCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | GAGGCGGGGCAAAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTGCCATGATGAGACCTTCCAACTaGACCATCAGCTCTCTCCGG | + |
Preference number: 4 (lower is better) Translates to: EAGQSLFAKSYQGIHPAMMRPSN*TISSLR Trigger: CCGGAGAGAGCTGATGGTCCAGTTGGAAGGTCTCAT...CATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | CTTACCCCAACTTCCATCCTGACAAACCACAACCAGTTCCTGAATCCTATACAGGGGGAGCTTGCCCCCTaGGTCTTCAGGAGCTTCATG | + |
Preference number: 4 (lower is better) Translates to: LTPTSILTNHNQFLNPIQGELAP*VFRSFM Trigger: CATGAAGCTCCTGAAGACCCAGGGGGCAAGCTCCCC...CTGTATAGGATTCAGGAACTGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR TCA 90 bp | GAGGCGGGGCAAAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTGCCATGATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC | + |
Preference number: 4 (lower is better) Translates to: EAGQSLFAKSYQGIHPAMMRSRS*ALISAN Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...CATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | TGTGAGATACAGTTGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCACCAGGCGGGCCACGTTaGGTTCTATGTTTGGGTCCA | + |
Preference number: 4 (lower is better) Translates to: CEIQLNRMDRRMKPAGFAPGGPR*VLCLGP Trigger: TGGACCCAAACATAGAACTCAACGTGGCCCGCCTGG...TGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAACTGTATCTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | TTGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCATTTAGAACAGGCTGGTGCTGGTTGCTATaGGAACCTCCTGCATGGCCC | + |
Preference number: 4 (lower is better) Translates to: LNRMDRRMKPAGFAFRTGWCWLL*EPPAWP Trigger: GGGCCATGCAGGAGGTTCTCATAGCAACCAGCACCA...GCCTGTTCTAAATGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | GCGGGGCAAAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTGCCATGATCCGATGTGAGCCAAGTTaGGTGGCTTTTCAGGCTGGT | + |
Preference number: 4 (lower is better) Translates to: AGQSLFAKSYQGIHPAMIRCEPS*VAFQAG Trigger: ACCAGCCTGAAAAGCCACTCAACTTGGCTCACATCG...GATCATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | ACCAGCTTCGATAGACGTGGGTGTGCAATTCATGGTGGGATAAGAAAGAACCATAAGGTTGGGTTCTGCTaGGCTTTCTCTGGCGTGGGC | + |
Preference number: 4 (lower is better) Translates to: TSFDRRGCAIHGGIRKNHKVGFC*AFSGVG Trigger: GCCCACGCCAGAGAAAGCTCAGCAGAACCCAACCTT...ATGGTTCTTTCTTATCCCACCATGAATTGCACACCCACGTCTATCGAAGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | TTGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCATTTAGAACAGGCCTTGCAGCTCCACCGTaGATGTACCCAGGTTTCCGG | + |
Preference number: 4 (lower is better) Translates to: LNRMDRRMKPAGFAFRTGLAAPP*MYPGFR Trigger: CCGGAAACCTGGGTACATTCACGGTGGAGCTGCAAG...GCCTGTTCTAAATGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | GCACAGGATGGGTGGCATAGCTTATGTTATGTGATGGCAGGGGATTTATTACCCGCTATGAGAACCTCCTaGATGGCCCCTCCAGAAGCA | + |
Preference number: 4 (lower is better) Translates to: AQDGWHSLCYVMAGDLLPAMRTS*MAPPEA Trigger: TGCTTCTGGAGGGGCCATGCAGGAGGTTCTCATAGC...GGGTAATAAATCCCCTGCCATCACATAACATAAGCTATGCCACCCATCCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | TTTTGTCTCGGCTACAGGACAGGGGTGCTTGAGTCTGGTCTCAGTGCTGACGTGTCATTTGGTGCTGGTTaGTATGAGAACCTCCTGCAT | + |
Preference number: 4 (lower is better) Translates to: FCLGYRTGVLESGLSADVSFGAG*YENLLH Trigger: ATGCAGGAGGTTCTCATAGCAACCAGCACCAAATGA...CACGTCAGCACTGAGACCAGACTCAAGCACCCCTGTCCTGTAGCCGAGACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | GGATCTGAACAAAACCTTCCCAAGGAATCACAAGTTGTTCTCCCTTCTCAACACTTCTGCTGCCAGTCGTaGGGCGTACCTGGCGATCAG | + |
Preference number: 4 (lower is better) Translates to: GSEQNLPKESQVVLPSQHFCCQS*GVPGDQ Trigger: CTGATCGCCAGGTACGCCGCACGACTGGCAGCAGAA...GTGTTGAGAAGGGAGAACAACTTGTGATTCCTTGGGAAGGTTTTGTTCAGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | TTGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCATTTAGAACAGGCGAGGAGCCGGAGTTCTaGCAGCAAGGTTGGGTTCTG | + |
Preference number: 4 (lower is better) Translates to: LNRMDRRMKPAGFAFRTGEEPEF*QQGWVL Trigger: CAGAACCCAACCTTGCTGGCAGAACTCCGGCTCCTC...GCCTGTTCTAAATGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | CCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAATTGAAATTGGTGATGGAGTCTaGAGCCACCAGCAGGTCACT | + |
Preference number: 4 (lower is better) Translates to: PSEDTVEFFACGSLRGIEIGDGV*SHQQVT Trigger: AGTGACCTGCTGGTGGCTGCAGACTCCATCACCAAT...TTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | CCAACACGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAAAGCTCATTCTCCAGCTaGCGCACAGACTCGTTCTCA | + |
Preference number: 4 (lower is better) Translates to: PTRLPLTNQTYPNFHPDKSSFSS*RTDSFS Trigger: TGAGAACGAGTCTGTGCGGCAGCTGGAGAATGAGCT...TTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACGTGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | GGAAAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTGTACTGTATCCCTCTaGCCTTCAGAAAGGCGGGAG | + |
Preference number: 4 (lower is better) Translates to: GKMPYLLRTQWSSLLVAPCTVSL*PSERRE Trigger: CTCCCGCCTTTCTGAAGGGCAGAGGGATACAGTACA...AGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | CTGCCCAGAGGGAGGAGGGAGCTTAGATTAGAGCAGCTTTTCTGTTTCTACATGGTGAGCCAAGTTGAGTaGCTTTTCAGGCTGGTCTGG | + |
Preference number: 4 (lower is better) Translates to: LPRGRRELRLEQLFCFYMVSQVE*LFRLVW Trigger: CCAGACCAGCCTGAAAAGCCACTCAACTTGGCTCAC...CATGTAGAAACAGAAAAGCTGCTCTAATCTAAGCTCCCTCCTCCCTCTGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | AGGAAAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCGTGTGTCGTTCATGCTaGTTACAGGTCTCGGAGGCA | + |
Preference number: 4 (lower is better) Translates to: RKNALPSEDTVEFFACGSVCRSC*LQVSEA Trigger: TGCCTCCGAGACCTGTAACCAGCATGAACGACACAC...GGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | CTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAATTGAACCAACACTCCTCTGCTGTGTaGGCTGTGATGAGGAGGATT | + |
Preference number: 4 (lower is better) Translates to: LRTQWSSLLVAPCVELNQHSSAV*AVMRRI Trigger: AATCCTCCTCATCACAGCCCACACAGCAGAGGAGTG...TTGGTTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | CTGCCCAGAGGGAGGAGGGAGCTTAGATTAGAGCAGCTTTTCTGTTTCTACATGCACTCCTCTGCTGTGTaGGCTGTGATGAGGAGGATT | + |
Preference number: 4 (lower is better) Translates to: LPRGRRELRLEQLFCFYMHSSAV*AVMRRI Trigger: AATCCTCCTCATCACAGCCCACACAGCAGAGGAGTG...CATGTAGAAACAGAAAAGCTGCTCTAATCTAAGCTCCCTCCTCCCTCTGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | CTGCCCAGAGGGAGGAGGGAGCTTAGATTAGAGCAGCTTTTCTGTTTCTACATGTTCTCTGGCGTGGGCTaGGAAGCTTGCTCATGTTCT | + |
Preference number: 4 (lower is better) Translates to: LPRGRRELRLEQLFCFYMFSGVG*EACSCS Trigger: AGAACATGAGCAAGCTTCCCAGCCCACGCCAGAGAA...CATGTAGAAACAGAAAAGCTGCTCTAATCTAAGCTCCCTCCTCCCTCTGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | CACAACTGCATGCAGAACACCAGGTGTTCAGGTAAGGCAATCACCACTCAGAAAGAGCTTTCTCTGGCGTaGGCTGGGAAGCTTGCTCAT | + |
Preference number: 4 (lower is better) Translates to: HNCMQNTRCSGKAITTQKELSLA*AGKLAH Trigger: ATGAGCAAGCTTCCCAGCCCACGCCAGAGAAAGCTC...TTTCTGAGTGGTGATTGCCTTACCTGAACACCTGGTGTTCTGCATGCAGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR CCA 90 bp | TCTCCAACACGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACTTCTGCCAGCAAGGTTaGGTTCTGCTGAGCTTTCTC | + |
Preference number: 4 (lower is better) Translates to: SPTRLPLTNQTYPNFHPDFCQQG*VLLSFL Trigger: GAGAAAGCTCAGCAGAACCCAACCTTGCTGGCAGAA...GTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACGTGTTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | ACAAAGTTCAACCTAAAGGGCACTCCCACAGCCTGGCTCTATGAATGCATAAAACCAGGCGGGCCACGTTaGGTTCTATGTTTGGGTCCA | + |
Preference number: 4 (lower is better) Translates to: TKFNLKGTPTAWLYECIKPGGPR*VLCLGP Trigger: TGGACCCAAACATAGAACTCAACGTGGCCCGCCTGG...TTTTATGCATTCATAGAGCCAGGCTGTGGGAGTGCCCTTTAGGTTGAACTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | CTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAACCAGTTCCTCGATGTGAGCCAAGTTaGGTGGCTTTTCAGGCTGGT | + |
Preference number: 4 (lower is better) Translates to: LTNQTYPNFHPDKPQPVPRCEPS*VAFQAG Trigger: ACCAGCCTGAAAAGCCACTCAACTTGGCTCACATCG...AGGAACTGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | CAAACTGAAGCAGGAACATACATTAGAGGCCAAAGCAATGAGAAGGTCAGCAGGCTCGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTT | + |
Preference number: 4 (lower is better) Translates to: QTEAGTYIRGQSNEKVSRLGGTM*AKLSGF Trigger: AAAGCCACTCAACTTGGCTCACATCGTGCCTCCGAG...CCTGCTGACCTTCTCATTGCTTTGGCCTCTAATGTATGTTCCTGCTTCAGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | CCAACACGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAATATTTGCATCGATGGTaGAGGAGATGTCAGGGGCAC | + |
Preference number: 4 (lower is better) Translates to: PTRLPLTNQTYPNFHPDKYLHRW*RRCQGH Trigger: GTGCCCCTGACATCTCCTTCACCATCGATGCAAATA...TTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACGTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | TGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACACTTAACGTCTGGTCTCAGTGCTaGCGTGGAGCTGGTAGGCCT | + |
Preference number: 4 (lower is better) Translates to: CELSNPRLPYLQYLSTLNVWSQC*RGAGRP Trigger: AGGCCTACCAGCTCCACGTCAGCACTGAGACCAGAC...GTTAAGTGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222726.2 |
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CDS-3UTR GCA 90 bp | TCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCTGGCTTTTCCGGGTCAAAGGCTaGGAGCAGGAAGTTCAGCAG | + |
Preference number: 4 (lower is better) Translates to: SSSHRTISMGLDLMGSWLFRVKG*EQEVQQ Trigger: CTGCTGAACTTCCTGCTCGCAGCCTTTGACCCGGAA...AAGCCAGGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | CTGTGGGGAGGCTTGGCTGTGCTAGATCAATGCTCATTCATAGGCCACCAGCTTATCGAAATCCCATCATaGTCTCACTGTGACAGTAGG | + |
Preference number: 4 (lower is better) Translates to: LWGGLAVLDQCSFIGHQLIEIPS*SHCDSR Trigger: CCTACTGTCACAGTGAGAGCATGATGGGATTTCGAT...AAGCTGGTGGCCTATGAATGAGCATTGATCTAGCACAGCCAAGCCTCCCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | GCGGGGCAAAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTGCCATGATCTCTGGGAACATGGGGTaGAAAGGTTCACGGCTTGAA | + |
Preference number: 4 (lower is better) Translates to: AGQSLFAKSYQGIHPAMISGNMG*KGSRLE Trigger: TTCAAGCCGTGAACCTTTGCACCCCATGTTCCCAGA...GATCATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | CTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAATTGAACCAAATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA | + |
Preference number: 4 (lower is better) Translates to: LRTQWSSLLVAPCVELNQMLFCR*RVGCDP Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...TTGGTTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | AAAGGAAAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTAGTGGCTTTTCAGGCTaGTCTGGGAACATGGGGTGC | + |
Preference number: 4 (lower is better) Translates to: KGKMPYLLRTQWSSLLVASGFSG*SGNMGC Trigger: GCACCCCATGTTCCCAGACCAGCCTGAAAAGCCACT...AGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | TCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCTGGCTTGAGCTTTCTCTGGCGTaGGCTGGGAAGCTTGCTCAT | + |
Preference number: 4 (lower is better) Translates to: SSSHRTISMGLDLMGSWLELSLA*AGKLAH Trigger: ATGAGCAAGCTTCCCAGCCCACGCCAGAGAAAGCTC...AAGCCAGGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | ACACGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCATTCTGCCAGCAAGGTTaGGTTCTGCTGAGCTTTCTC | + |
Preference number: 4 (lower is better) Translates to: TRLPLTNQTYPNFHPDKPFCQQG*VLLSFL Trigger: GAGAAAGCTCAGCAGAACCCAACCTTGCTGGCAGAA...TGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | CTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAACCAGTTCCTATGAGACCTTCCAACTaGACCATCAGCTCTCTCCGG | + |
Preference number: 4 (lower is better) Translates to: LTNQTYPNFHPDKPQPVPMRPSN*TISSLR Trigger: CCGGAGAGAGCTGATGGTCCAGTTGGAAGGTCTCAT...AGGAACTGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | AGTTTAATCACTTCAAAATATAACATGTCCCCAGGAGGTTCCAACACACACACAGGCCTGCTGATGGTGTaGCTGGGGGAAGAGCGTGGG | + |
Preference number: 4 (lower is better) Translates to: SLITSKYNMSPGGSNTHTGLLMV*LGEERG Trigger: CCCACGCTCTTCCCCCAGCCACACCATCAGCAGGCC...TGTGTGTGTGTTGGAACCTCCTGGGGACATGTTATATTTTGAAGTGATTAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | GAGGCGGGGCAAAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTGCCATGCTCAAGCATACATGGTaGGTTGTTCCGGAGCATGTT | + |
Preference number: 4 (lower is better) Translates to: EAGQSLFAKSYQGIHPAMLKHTW*VVPEHV Trigger: AACATGCTCCGGAACAACCCACCATGTATGCTTGAG...CATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR CAA 72 bp | TTCCTGTTGGTAGGTTTAATCATTTCTCAGAGGGACTaGGGGACATGGGTAGGCCAAGGACCCTTCTTGGCT | + |
Preference number: 4 (lower is better) Translates to: FLLVGLIISQRD*GTWVGQGPFLA Trigger: AGCCAAGAAGGGTCCTTGGCCTACCCATGTCCCCAAGTCCCTCTGAGAAATGATTAAACCTACCAACAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CAA 72 bp | AATCCACCTGTGCAAAGAAATCAGAGAACTGTGCAGTaGTGCGACTTTGGTGCTAGCCTGAGCTCAGGGAAC | + |
Preference number: 4 (lower is better) Translates to: NPPVQRNQRTVQ*CDFGASLSSGN Trigger: GTTCCCTGAGCTCAGGCTAGCACCAAAGTCGCACAACTGCACAGTTCTCTGATTTCTTTGCACAGGTGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
CDS-3UTR TCA 90 bp | TTTTGTCTCGGCTACAGGACAGGGGTGCTTGAGTCTGGTCTCAGTGCTGACGTGATCTTAACTTGTCCATaGTCTTTCCTCCACACAATG | + |
Preference number: 4 (lower is better) Translates to: FCLGYRTGVLESGLSADVILTCP*SFLHTM Trigger: CATTGTGTGGAGGAAAGATCATGGACAAGTTAAGAT...CACGTCAGCACTGAGACCAGACTCAAGCACCCCTGTCCTGTAGCCGAGACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | CTGCCCAGAGGGAGGAGGGAGCTTAGATTAGAGCAGCTTTTCTGTTTCTACATGCTGCTGTGGGTAGTTTaGGAACTTCCCGAAGGAATT | + |
Preference number: 4 (lower is better) Translates to: LPRGRRELRLEQLFCFYMLLWVV*ELPEGI Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACAGCAG...CATGTAGAAACAGAAAAGCTGCTCTAATCTAAGCTCCCTCCTCCCTCTGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | GAGGCGGGGCAAAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTGCCATGGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA | + |
Preference number: 4 (lower is better) Translates to: EAGQSLFAKSYQGIHPAMETGSG*LFCVTK Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...CATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | ATTTGTTCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCTGGTGCTGGTTGCTATaGGAACCTCCTGCATGGCCC | + |
Preference number: 4 (lower is better) Translates to: ICSSSHRTISMGLDLMGSWCWLL*EPPAWP Trigger: GGGCCATGCAGGAGGTTCTCATAGCAACCAGCACCA...GGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGAACAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | TTCGATAGACGTGGGTGTGCAATTCATGGTGGGATAAGAAAGAACCATCCCTGTAGGACATGGTATTGGTaGTGGAGTCTGCAGCCACCA | + |
Preference number: 4 (lower is better) Translates to: FDRRGCAIHGGIRKNHPCRTWYW*WSLQPP Trigger: TGGTGGCTGCAGACTCCATCACCAATACCATGTCCT...ACAGGGATGGTTCTTTCTTATCCCACCATGAATTGCACACCCACGTCTATCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | TGTGAGATACAGTTGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCAAGGACATGGTATTGGTaGTGGAGTCTGCAGCCACCA | + |
Preference number: 4 (lower is better) Translates to: CEIQLNRMDRRMKPAGFARTWYW*WSLQPP Trigger: TGGTGGCTGCAGACTCCATCACCAATACCATGTCCT...TGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAACTGTATCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | CCTGACAAACCACAACCAGTTCCTGAATCCTATACAGTAGATTTCACCCACCTCGCCAGATCCTCAAACTaGGGTCTCGAGAACTCGGAA | + |
Preference number: 4 (lower is better) Translates to: PDKPQPVPESYTVDFTHLARSSN*GLENSE Trigger: TTCCGAGTTCTCGAGACCTCAGTTTGAGGATCTGGC...GAGGTGGGTGAAATCTACTGTATAGGATTCAGGAACTGGTTGTGGTTTGTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | ACCAGCTTCGATAGACGTGGGTGTGCAATTCATGGTGGGATAAGAAAGAACCATCCTTCAGGAGCTTCATaGGACCTTCCAACTGGACCA | + |
Preference number: 4 (lower is better) Translates to: TSFDRRGCAIHGGIRKNHPSGAS*DLPTGP Trigger: TGGTCCAGTTGGAAGGTCTCATGAAGCTCCTGAAGG...ATGGTTCTTTCTTATCCCACCATGAATTGCACACCCACGTCTATCGAAGCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | GTTTGCTCTTGTGGGGCTGCAGCTTGGGCAACAACATTGACATTTGAGGAGCTCTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC | + |
Preference number: 4 (lower is better) Translates to: VCSCGAAAWATTLTFEELLSPHL*KQLSSF Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...GAGCTCCTCAAATGTCAATGTTGTTGCCCAAGCTGCAGCCCCACAAGAGCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
CDS-3UTR GCA 90 bp | GTTTGCTCTTGTGGGGCTGCAGCTTGGGCAACAACATTGACATTTGAGGAGCTCCACAGCTCAGGGACTTaGTTAATGCATTCGTTAGCT | + |
Preference number: 4 (lower is better) Translates to: VCSCGAAAWATTLTFEELHSSGT*LMHSLA Trigger: AGCTAACGAATGCATTAAGCAAGTCCCTGAGCTGTG...GAGCTCCTCAAATGTCAATGTTGTTGCCCAAGCTGCAGCCCCACAAGAGCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | ACAACTGCATGCAGAACACCAGGTGTTCAGGTAAGGCAATCACCACTCAGAAAGAGAGTGTGTCGTTCATaGTGGTTACAGGTCTCGGAG | + |
Preference number: 4 (lower is better) Translates to: TTACRTPGVQVRQSPLRKRVCRS*WLQVSE Trigger: CTCCGAGACCTGTAACCAGCATGAACGACACACTCT...CTTTCTGAGTGGTGATTGCCTTACCTGAACACCTGGTGTTCTGCATGCAGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR GCA 90 bp | CAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACACTTTCAGGGGCACTCCTCTaGTGTGTGGGCTGTGATGAG | + |
Preference number: 4 (lower is better) Translates to: QCELSNPRLPYLQYLSTLSGALL*CVGCDE Trigger: CTCATCACAGCCCACACAGCAGAGGAGTGCCCCTGA...AAGTGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | CTGTGGGGAGGCTTGGCTGTGCTAGATCAATGCTCATTCATAGGCCACCAGCTTGCAATCAGCTGCCTTTaGTGTTTATTTGCATCGATG | + |
Preference number: 4 (lower is better) Translates to: LWGGLAVLDQCSFIGHQLAISCL*CLFASM Trigger: CATCGATGCAAATAAACAGCAAAGGCAGCTGATTGC...AAGCTGGTGGCCTATGAATGAGCATTGATCTAGCACAGCCAAGCCTCCCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | CTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAACCACCTTCTCGAACTTTGTaGAAACGCCTCTTGCACATC | + |
Preference number: 4 (lower is better) Translates to: LPLTNQTYPNFHPDKPQPPSRTL*KRLLHI Trigger: GATGTGCAAGAGGCGTTTGCACAAAGTTCGAGAAGG...TGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | CTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAACCAGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC | + |
Preference number: 4 (lower is better) Translates to: LPLTNQTYPNFHPDKPQPGRNRI*LTVLCN Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...TGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | TGTGAGATACAGTTGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCAGTGTGTCGTTCATGCTaGTTACAGGTCTCGGAGGCA | + |
Preference number: 4 (lower is better) Translates to: CEIQLNRMDRRMKPAGFAVCRSC*LQVSEA Trigger: TGCCTCCGAGACCTGTAACCAGCATGAACGACACAC...TGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAACTGTATCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | TGTGAGATACAGTTGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCATCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT | + |
Preference number: 4 (lower is better) Translates to: CEIQLNRMDRRMKPAGFASLRLS*RADILC Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...TGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAACTGTATCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | ACCAGCTTCGATAGACGTGGGTGTGCAATTCATGGTGGGATAAGAAAGAACCATCCAGGTTTCCGGGAGTaGATTTGGGCTAGAAAAGCC | + |
Preference number: 4 (lower is better) Translates to: TSFDRRGCAIHGGIRKNHPGFRE*IWARKA Trigger: GGCTTTTCTAGCCCAAATCCACTCCCGGAAACCTGG...ATGGTTCTTTCTTATCCCACCATGAATTGCACACCCACGTCTATCGAAGCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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3UTR CAA 72 bp | CTTTGGAAAGGAGCCCCCAAGAGCCCATTATTCCTGTaGGTAGGTTTAATCATTTCTCAGAGGGACTTGGGG | + |
Preference number: 4 (lower is better) Translates to: LWKGAPKSPLFL*VGLIISQRDLG Trigger: CCCCAAGTCCCTCTGAGAAATGATTAAACCTACCAACAGGAATAATGGGCTCTTGGGGGCTCCTTTCCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CAA 72 bp | GGTGGGATAAGAAAGAACCATCCCTGTGAGATACAGTaGAACAGAATGGACAGACGGATGAAACCTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: GGIRKNHPCEIQ*NRMDRRMKPAG Trigger: CCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAACTGTATCTCACAGGGATGGTTCTTTCTTATCCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
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3UTR CAA 72 bp | GAAGCTGAACTAACTGAATGTTCACAGTGTGGAGGTTaGCTCTTGTGGGGCTGCAGCTTGGGCAACAACATT | + |
Preference number: 4 (lower is better) Translates to: EAELTECSQCGG*LLWGCSLGNNI Trigger: AATGTTGTTGCCCAAGCTGCAGCCCCACAAGAGCAAACCTCCACACTGTGAACATTCAGTTAGTTCAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | ACCAGCTTCGATAGACGTGGGTGTGCAATTCATGGTGGGATAAGAAAGAACCATATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC | + |
Preference number: 4 (lower is better) Translates to: TSFDRRGCAIHGGIRKNHMRSRS*ALISAN Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...ATGGTTCTTTCTTATCCCACCATGAATTGCACACCCACGTCTATCGAAGCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | AGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACCCAGGCGGGCCACGTTaGGTTCTATGTTTGGGTCCA | + |
Preference number: 4 (lower is better) Translates to: RTTRFIEICGSQGTRQEDPGGPR*VLCLGP Trigger: TGGACCCAAACATAGAACTCAACGTGGCCCGCCTGG...GTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR TCA 90 bp | CATTTAGAACAGGCCCCAAAAGTAAATTTGGAGAGCCAAGGAAAGAAATCCACCAGTTCAGCAGGAGACTaGTGGACTGCTCCACGTGGA | + |
Preference number: 4 (lower is better) Translates to: HLEQAPKVNLESQGKKSTSSAGD*WTAPRG Trigger: TCCACGTGGAGCAGTCCATCAGTCTCCTGCTGAACT...GGTGGATTTCTTTCCTTGGCTCTCCAAATTTACTTTTGGGGCCTGTTCTAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | TGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACACTTAACAGTTCAGCAGGAGACTaGTGGACTGCTCCACGTGGA | + |
Preference number: 4 (lower is better) Translates to: CELSNPRLPYLQYLSTLNSSAGD*WTAPRG Trigger: TCCACGTGGAGCAGTCCATCAGTCTCCTGCTGAACT...GTTAAGTGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | ACAACTGCATGCAGAACACCAGGTGTTCAGGTAAGGCAATCACCACTCAGAAAGCTGCTGTGGGTAGTTTaGGAACTTCCCGAAGGAATT | + |
Preference number: 4 (lower is better) Translates to: TTACRTPGVQVRQSPLRKLLWVV*ELPEGI Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACAGCAG...CTTTCTGAGTGGTGATTGCCTTACCTGAACACCTGGTGTTCTGCATGCAGTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR TCA 90 bp | AGGGTGTTATATATCCTAGACTGGCCTCAAATTCACTATGTAGCTGAGGATGACCTGTGGAGGAGGGTCTaGCATGAGCGTGTCCAAGAA | + |
Preference number: 4 (lower is better) Translates to: RVLYILDWPQIHYVAEDDLWRRV*HERVQE Trigger: TTCTTGGACACGCTCATGTCAGACCCTCCTCCACAG...GTCATCCTCAGCTACATAGTGAATTTGAGGCCAGTCTAGGATATATAACACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR TCA 90 bp | CAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACACTTCTGTGGAGGAGGGTCTaGCATGAGCGTGTCCAAGAA | + |
Preference number: 4 (lower is better) Translates to: QCELSNPRLPYLQYLSTLLWRRV*HERVQE Trigger: TTCTTGGACACGCTCATGTCAGACCCTCCTCCACAG...AAGTGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | AACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGTGGTGCTGGTTGCTATaGGAACCTCCTGCATGGCCC | + |
Preference number: 4 (lower is better) Translates to: NHKIYRNLWFTGNKTRGLWCWLL*EPPAWP Trigger: GGGCCATGCAGGAGGTTCTCATAGCAACCAGCACCA...CAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR TCA 90 bp | AAACTTACCCCAACTTCCATCCTGACAAACCACAACCAGTTCCTGAATCCTATACTCGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTT | + |
Preference number: 4 (lower is better) Translates to: KLTPTSILTNHNQFLNPILGGTM*AKLSGF Trigger: AAAGCCACTCAACTTGGCTCACATCGTGCCTCCGAG...TATAGGATTCAGGAACTGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | CAACAAAATCCACCTGTGCAAAGAAATCAGAGAACTGTGCAGTTGTGCGACTTTTTCCGGGTCAAAGGCTaGGAGCAGGAAGTTCAGCAG | + |
Preference number: 4 (lower is better) Translates to: QQNPPVQRNQRTVQLCDFFRVKG*EQEVQQ Trigger: CTGCTGAACTTCCTGCTCGCAGCCTTTGACCCGGAA...AAAGTCGCACAACTGCACAGTTCTCTGATTTCTTTGCACAGGTGGATTTTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR GCA 90 bp | TTGAACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTTTCCGGGTCAAAGGCTaGGAGCAGGAAGTTCAGCAG | + |
Preference number: 4 (lower is better) Translates to: LNQCELSNPRLPYLQYLSFRVKG*EQEVQQ Trigger: CTGCTGAACTTCCTGCTCGCAGCCTTTGACCCGGAA...AGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | CTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAATTGAACCAAATCGAAATCCCATCATaGTCTCACTGTGACAGTAGG | + |
Preference number: 4 (lower is better) Translates to: LRTQWSSLLVAPCVELNQIEIPS*SHCDSR Trigger: CCTACTGTCACAGTGAGAGCATGATGGGATTTCGAT...TTGGTTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | TTGAACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTGCTATGAGAACCTCCTaGATGGCCCCTCCAGAAGCA | + |
Preference number: 4 (lower is better) Translates to: LNQCELSNPRLPYLQYLSAMRTS*MAPPEA Trigger: TGCTTCTGGAGGGGCCATGCAGGAGGTTCTCATAGC...AGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | TTGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCATTTAGAACAGGCTCTGGGAACATGGGGTaGAAAGGTTCACGGCTTGAA | + |
Preference number: 4 (lower is better) Translates to: LNRMDRRMKPAGFAFRTGSGNMG*KGSRLE Trigger: TTCAAGCCGTGAACCTTTGCACCCCATGTTCCCAGA...GCCTGTTCTAAATGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | CATTTAGAACAGGCCCCAAAAGTAAATTTGGAGAGCCAAGGAAAGAAATCCACCTGTGCAAACGCCTCTTaGACATCTCCGCCTACCCCA | + |
Preference number: 4 (lower is better) Translates to: HLEQAPKVNLESQGKKSTCANAS*TSPPTP Trigger: TGGGGTAGGCGGAGATGTGCAAGAGGCGTTTGCACA...GGTGGATTTCTTTCCTTGGCTCTCCAAATTTACTTTTGGGGCCTGTTCTAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | TACAGGAAAGGGATAGAAAGGGACCTGACAAAGTTCAACCTAAAGGGCACTCCCGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC | + |
Preference number: 4 (lower is better) Translates to: YRKGIERDLTKFNLKGTPGRNRI*LTVLCN Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...GGGAGTGCCCTTTAGGTTGAACTTTGTCAGGTCCCTTTCTATCCCTTTCCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | TCTTACAGGATTGAACACATCTATGAGCACAGGATGGGTGGCATAGCTTATGTTAGTGGCTTTTCAGGCTaGTCTGGGAACATGGGGTGC | + |
Preference number: 4 (lower is better) Translates to: SYRIEHIYEHRMGGIAYVSGFSG*SGNMGC Trigger: GCACCCCATGTTCCCAGACCAGCCTGAAAAGCCACT...AACATAAGCTATGCCACCCATCCTGTGCTCATAGATGTGTTCAATCCTGTAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | AACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACAGAGCTTTCTCTGGCGTaGGCTGGGAAGCTTGCTCAT | + |
Preference number: 4 (lower is better) Translates to: NQCELSNPRLPYLQYLSTELSLA*AGKLAH Trigger: ATGAGCAAGCTTCCCAGCCCACGCCAGAGAAAGCTC...TGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | TCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCTGGCTTTTCTGCCAGCAAGGTTaGGTTCTGCTGAGCTTTCTC | + |
Preference number: 4 (lower is better) Translates to: SSSHRTISMGLDLMGSWLFCQQG*VLLSFL Trigger: GAGAAAGCTCAGCAGAACCCAACCTTGCTGGCAGAA...AAGCCAGGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | AAACCTTCCCAAGGAATCACAAGTTGTTCTCCCTTCTCAACACAAAACCGGTCTTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT | + |
Preference number: 4 (lower is better) Translates to: KPSQGITSCSPFSTQNRSSLRLS*RADILC Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...AGACCGGTTTTGTGTTGAGAAGGGAGAACAACTTGTGATTCCTTGGGAAGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | CTGGGTTTGCATTTAGAACAGGCCCCAAAAGTAAATTTGGAGAGCCAAGGAAAGATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC | + |
Preference number: 4 (lower is better) Translates to: LGLHLEQAPKVNLESQGKMRSRS*ALISAN Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...CTTTCCTTGGCTCTCCAAATTTACTTTTGGGGCCTGTTCTAAATGCAAACCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | TGTGAGATACAGTTGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCACTGCTGTGGGTAGTTTaGGAACTTCCCGAAGGAATT | + |
Preference number: 4 (lower is better) Translates to: CEIQLNRMDRRMKPAGFALLWVV*ELPEGI Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACAGCAG...TGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAACTGTATCTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | AGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACGAGGAGGGTCTGACATaGGCGTGTCCAAGAAGCCAT | + |
Preference number: 4 (lower is better) Translates to: RTTRFIEICGSQGTRQEDEEGLT*ACPRSH Trigger: ATGGCTTCTTGGACACGCTCATGTCAGACCCTCCTC...GTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR TCA 90 bp | GAGCAGACATCAGTGCTAAATTATATCGCAACAGTTTGGCTCATGCATATAAGATGGTGCTGGTTGCTATaGGAACCTCCTGCATGGCCC | + |
Preference number: 4 (lower is better) Translates to: EQTSVLNYIATVWLMHIRWCWLL*EPPAWP Trigger: GGGCCATGCAGGAGGTTCTCATAGCAACCAGCACCA...TCTTATATGCATGAGCCAAACTGTTGCGATATAATTTAGCACTGATGTCTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | AAACTTACCCCAACTTCCATCCTGACAAACCACAACCAGTTCCTGAATCCTATACGATGTGAGCCAAGTTaGGTGGCTTTTCAGGCTGGT | + |
Preference number: 4 (lower is better) Translates to: KLTPTSILTNHNQFLNPIRCEPS*VAFQAG Trigger: ACCAGCCTGAAAAGCCACTCAACTTGGCTCACATCG...TATAGGATTCAGGAACTGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | AACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGCTCGGAGGCACGATGTaGGCCAAGTTGAGTGGCTTT | + |
Preference number: 4 (lower is better) Translates to: NHKIYRNLWFTGNKTRGLLGGTM*AKLSGF Trigger: AAAGCCACTCAACTTGGCTCACATCGTGCCTCCGAG...CAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR TCA 90 bp | AAACCTTCCCAAGGAATCACAAGTTGTTCTCCCTTCTCAACACAAAACCGGTCTTATTTGCATCGATGGTaGAGGAGATGTCAGGGGCAC | + |
Preference number: 4 (lower is better) Translates to: KPSQGITSCSPFSTQNRSYLHRW*RRCQGH Trigger: GTGCCCCTGACATCTCCTTCACCATCGATGCAAATA...AGACCGGTTTTGTGTTGAGAAGGGAGAACAACTTGTGATTCCTTGGGAAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | ATGAACCTTCCCTGCCTTATTATAGATCATCCGATAATCCATCTTCATAGTCTCAAGGTTGGGTTCTGCTaGGCTTTCTCTGGCGTGGGC | + |
Preference number: 4 (lower is better) Translates to: MNLPCLIIDHPIIHLHSLKVGFC*AFSGVG Trigger: GCCCACGCCAGAGAAAGCTCAGCAGAACCCAACCTT...GAGACTATGAAGATGGATTATCGGATGATCTATAATAAGGCAGGGAAGGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | TTACCCGATCTTTATGAGAAGAGTTTCTATGCCTTTTCAGAGAAATGGAAGCTGAAGGTTGGGTTCTGCTaGGCTTTCTCTGGCGTGGGC | + |
Preference number: 4 (lower is better) Translates to: LPDLYEKSFYAFSEKWKLKVGFC*AFSGVG Trigger: GCCCACGCCAGAGAAAGCTCAGCAGAACCCAACCTT...CAGCTTCCATTTCTCTGAAAAGGCATAGAAACTCTTCTCATAAAGATCGGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | CAACAAAATCCACCTGTGCAAAGAAATCAGAGAACTGTGCAGTTGTGCGACTTTCTTCTCAGAGGTCGGTaGTGGAGCCAGATCCTCAAA | + |
Preference number: 4 (lower is better) Translates to: QQNPPVQRNQRTVQLCDFLLRGR*WSQILK Trigger: TTTGAGGATCTGGCTCCATCACCGACCTCTGAGAAG...AAAGTCGCACAACTGCACAGTTCTCTGATTTCTTTGCACAGGTGGATTTTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR TCA 90 bp | GCACAGGATGGGTGGCATAGCTTATGTTATGTGATGGCAGGGGATTTATTACCCTTCATCAAGCCGGTTTaGACTCTCAAGCATACATGG | + |
Preference number: 4 (lower is better) Translates to: AQDGWHSLCYVMAGDLLPFIKPV*TLKHTW Trigger: CCATGTATGCTTGAGAGTTCAAACCGGCTTGATGAA...GGGTAATAAATCCCCTGCCATCACATAACATAAGCTATGCCACCCATCCTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | AGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACAGGTGGAGAGTCGGATaGGATCCAGATCTTGAGCCC | + |
Preference number: 4 (lower is better) Translates to: RTTRFIEICGSQGTRQEDRWRVG*DPDLEP Trigger: GGGCTCAAGATCTGGATCGCATCCGACTCTCCACCT...GTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR GCA 90 bp | CTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAACCACCACCAGGTGCAAATTaGATTTCTTCTGCACAAATC | + |
Preference number: 4 (lower is better) Translates to: LPLTNQTYPNFHPDKPQPPPGAN*ISSAQI Trigger: GATTTGTGCAGAAGAAATGCAATTTGCACCTGGTGG...TGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | AGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTTCCGGGTCAAAGGCTaGGAGCAGGAAGTTCAGCAG | + |
Preference number: 4 (lower is better) Translates to: RTTRFIEICGSQGTRQEDFRVKG*EQEVQQ Trigger: CTGCTGAACTTCCTGCTCGCAGCCTTTGACCCGGAA...GTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR GCA 90 bp | CTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAACCAGTTCCTGACATTTTCTACATTTaGCAGTCGGTGCAGAAGAGG | + |
Preference number: 4 (lower is better) Translates to: LTNQTYPNFHPDKPQPVPDIFYI*QSVQKR Trigger: CCTCTTCTGCACCGACTGGCAAATGTAGAAAATGTC...AGGAACTGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
||
CDS-3UTR GCA 90 bp | GCACAGGATGGGTGGCATAGCTTATGTTATGTGATGGCAGGGGATTTATTACCCTCATTTGGTGCTGGTTaGTATGAGAACCTCCTGCAT | + |
Preference number: 4 (lower is better) Translates to: AQDGWHSLCYVMAGDLLPSFGAG*YENLLH Trigger: ATGCAGGAGGTTCTCATAGCAACCAGCACCAAATGA...GGGTAATAAATCCCCTGCCATCACATAACATAAGCTATGCCACCCATCCTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | AAACCTTCCCAAGGAATCACAAGTTGTTCTCCCTTCTCAACACAAAACCGGTCTAGAGTGTGTCGTTCATaGTGGTTACAGGTCTCGGAG | + |
Preference number: 4 (lower is better) Translates to: KPSQGITSCSPFSTQNRSRVCRS*WLQVSE Trigger: CTCCGAGACCTGTAACCAGCATGAACGACACACTCT...AGACCGGTTTTGTGTTGAGAAGGGAGAACAACTTGTGATTCCTTGGGAAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | TCTTACAGGATTGAACACATCTATGAGCACAGGATGGGTGGCATAGCTTATGTTTGTACTGTATCCCTCTaGCCTTCAGAAAGGCGGGAG | + |
Preference number: 4 (lower is better) Translates to: SYRIEHIYEHRMGGIAYVCTVSL*PSERRE Trigger: CTCCCGCCTTTCTGAAGGGCAGAGGGATACAGTACA...AACATAAGCTATGCCACCCATCCTGTGCTCATAGATGTGTTCAATCCTGTAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | CCAACACGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAAATACCATCACTCCACTaGAGTCAGAGATCATTGAGA | + |
Preference number: 4 (lower is better) Translates to: PTRLPLTNQTYPNFHPDKIPSLH*SQRSLR Trigger: TCTCAATGATCTCTGACTCCAGTGGAGTGATGGTAT...TTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACGTGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | AATCAGAGAACTGTGCAGTTGTGCGACTTTGGTGCTAGCCTGAGCTCAGGGAACACTTCCCGAAGGAATTaGTCATATCTTCCATATACC | + |
Preference number: 4 (lower is better) Translates to: NQRTVQLCDFGASLSSGNTSRRN*SYLPYT Trigger: GGTATATGGAAGATATGACCAATTCCTTCGGGAAGT...GTTCCCTGAGCTCAGGCTAGCACCAAAGTCGCACAACTGCACAGTTCTCTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR CCA 90 bp | CAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACACTTCTTTTCAGGCTGGTCTaGGAACATGGGGTGCAAAGG | + |
Preference number: 4 (lower is better) Translates to: QCELSNPRLPYLQYLSTLLFRLV*EHGVQR Trigger: CCTTTGCACCCCATGTTCCCAGACCAGCCTGAAAAG...AAGTGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | AACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACAGTGAGCCAAGTTGAGTaGCTTTTCAGGCTGGTCTGG | + |
Preference number: 4 (lower is better) Translates to: NQCELSNPRLPYLQYLSTVSQVE*LFRLVW Trigger: CCAGACCAGCCTGAAAAGCCACTCAACTTGGCTCAC...TGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | TCTTACAGGATTGAACACATCTATGAGCACAGGATGGGTGGCATAGCTTATGTTGTGTGTCGTTCATGCTaGTTACAGGTCTCGGAGGCA | + |
Preference number: 4 (lower is better) Translates to: SYRIEHIYEHRMGGIAYVVCRSC*LQVSEA Trigger: TGCCTCCGAGACCTGTAACCAGCATGAACGACACAC...AACATAAGCTATGCCACCCATCCTGTGCTCATAGATGTGTTCAATCCTGTAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | CATGGCCACTTGCAATCCACCACTGCATTTTTCTATTATATTCCTTGGTACTTTGTCGTGCGGCGTACCTaGCGATCAGCCTGTGTTCTT | + |
Preference number: 4 (lower is better) Translates to: HGHLQSTTAFFYYIPWYFVVRRT*RSACVL Trigger: AAGAACACAGGCTGATCGCCAGGTACGCCGCACGAC...AAAGTACCAAGGAATATAATAGAAAAATGCAGTGGTGGATTGCAAGTGGCCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | CATTTAGAACAGGCCCCAAAAGTAAATTTGGAGAGCCAAGGAAAGAAATCCACCCACTCCTCTGCTGTGTaGGCTGTGATGAGGAGGATT | + |
Preference number: 4 (lower is better) Translates to: HLEQAPKVNLESQGKKSTHSSAV*AVMRRI Trigger: AATCCTCCTCATCACAGCCCACACAGCAGAGGAGTG...GGTGGATTTCTTTCCTTGGCTCTCCAAATTTACTTTTGGGGCCTGTTCTAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | AGGGTGTTATATATCCTAGACTGGCCTCAAATTCACTATGTAGCTGAGGATGACTTCTCTGGCGTGGGCTaGGAAGCTTGCTCATGTTCT | + |
Preference number: 4 (lower is better) Translates to: RVLYILDWPQIHYVAEDDFSGVG*EACSCS Trigger: AGAACATGAGCAAGCTTCCCAGCCCACGCCAGAGAA...GTCATCCTCAGCTACATAGTGAATTTGAGGCCAGTCTAGGATATATAACACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CAA 72 bp | AAGGGCTTTGTGTATGCTAAGCAAACCCTCGGCCAATaGAATAACACCCTAGCCCTGGATAAGGCCTTTTTC | + |
Preference number: 4 (lower is better) Translates to: KGFVYAKQTLGQ*NNTLALDKAFF Trigger: GAAAAAGGCCTTATCCAGGGCTAGGGTGTTATTCAATTGGCCGAGGGTTTGCTTAGCATACACAAAGCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CAA 72 bp | AAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTaGCTTGTGGCTCCTTGCGTGGAATTGAACCAATGT | + |
Preference number: 4 (lower is better) Translates to: KMPYLLRTQWSS*LVAPCVELNQC Trigger: ACATTGGTTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000222726.2 |
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3UTR CAA 72 bp | GAACTAACTGAATGTTCACAGTGTGGAGGTTTGCTCTaGTGGGGCTGCAGCTTGGGCAACAACATTGACATT | + |
Preference number: 4 (lower is better) Translates to: ELTECSQCGGLL*WGCSLGNNIDI Trigger: AATGTCAATGTTGTTGCCCAAGCTGCAGCCCCACAAGAGCAAACCTCCACACTGTGAACATTCAGTTAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | ACCAGCTTCGATAGACGTGGGTGTGCAATTCATGGTGGGATAAGAAAGAACCATGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA | + |
Preference number: 4 (lower is better) Translates to: TSFDRRGCAIHGGIRKNHETGSG*LFCVTK Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...ATGGTTCTTTCTTATCCCACCATGAATTGCACACCCACGTCTATCGAAGCTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | AACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACATATTTGCATCGATGGTaGAGGAGATGTCAGGGGCAC | + |
Preference number: 4 (lower is better) Translates to: NQCELSNPRLPYLQYLSTYLHRW*RRCQGH Trigger: GTGCCCCTGACATCTCCTTCACCATCGATGCAAATA...TGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | TTGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCATTTAGAACAGGCTTCATCAAGCCGGTTTaGACTCTCAAGCATACATGG | + |
Preference number: 4 (lower is better) Translates to: LNRMDRRMKPAGFAFRTGFIKPV*TLKHTW Trigger: CCATGTATGCTTGAGAGTTCAAACCGGCTTGATGAA...GCCTGTTCTAAATGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | CCTGACAAACCACAACCAGTTCCTGAATCCTATACAGTAGATTTCACCCACCTCTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC | + |
Preference number: 4 (lower is better) Translates to: PDKPQPVPESYTVDFTHLLSPHL*KQLSSF Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...GAGGTGGGTGAAATCTACTGTATAGGATTCAGGAACTGGTTGTGGTTTGTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | TTGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCATTTAGAACAGGCTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC | + |
Preference number: 4 (lower is better) Translates to: LNRMDRRMKPAGFAFRTGLSPHL*KQLSSF Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...GCCTGTTCTAAATGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | AAAGGAAAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTAAATCTCAGCTTGCATaGTGTTCTGTAGGTGGAGAG | + |
Preference number: 4 (lower is better) Translates to: KGKMPYLLRTQWSSLLVAKSQLA*CSVGGE Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTGAGATTT...AGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | CTTACCCCAACTTCCATCCTGACAAACCACAACCAGTTCCTGAATCCTATACAGGACATTTTCTACATTTaGCAGTCGGTGCAGAAGAGG | + |
Preference number: 4 (lower is better) Translates to: LTPTSILTNHNQFLNPIQDIFYI*QSVQKR Trigger: CCTCTTCTGCACCGACTGGCAAATGTAGAAAATGTC...CTGTATAGGATTCAGGAACTGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | AAGCCCAGTCTTGACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCGCTATGAGAACCTCCTaGATGGCCCCTCCAGAAGCA | + |
Preference number: 4 (lower is better) Translates to: KPSLDSDKNHKIYRNLWFAMRTS*MAPPEA Trigger: TGCTTCTGGAGGGGCCATGCAGGAGGTTCTCATAGC...GAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGTCAAGACTGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR GCA 90 bp | TTCGATAGACGTGGGTGTGCAATTCATGGTGGGATAAGAAAGAACCATCCCTGTTCATTTGGTGCTGGTTaGTATGAGAACCTCCTGCAT | + |
Preference number: 4 (lower is better) Translates to: FDRRGCAIHGGIRKNHPCSFGAG*YENLLH Trigger: ATGCAGGAGGTTCTCATAGCAACCAGCACCAAATGA...ACAGGGATGGTTCTTTCTTATCCCACCATGAATTGCACACCCACGTCTATCGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | CTGCCCAGAGGGAGGAGGGAGCTTAGATTAGAGCAGCTTTTCTGTTTCTACATGCCTTTGCTGTTTATTTaGATCGATGGTGAAGGAGAT | + |
Preference number: 4 (lower is better) Translates to: LPRGRRELRLEQLFCFYMPLLFI*IDGEGD Trigger: ATCTCCTTCACCATCGATGCAAATAAACAGCAAAGG...CATGTAGAAACAGAAAAGCTGCTCTAATCTAAGCTCCCTCCTCCCTCTGGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | GCACAGGATGGGTGGCATAGCTTATGTTATGTGATGGCAGGGGATTTATTACCCGCAATCAGCTGCCTTTaGTGTTTATTTGCATCGATG | + |
Preference number: 4 (lower is better) Translates to: AQDGWHSLCYVMAGDLLPAISCL*CLFASM Trigger: CATCGATGCAAATAAACAGCAAAGGCAGCTGATTGC...GGGTAATAAATCCCCTGCCATCACATAACATAAGCTATGCCACCCATCCTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | ACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGAGCTGGTCTGGGAACATaGGGTGCAAAGGTTCACGGC | + |
Preference number: 4 (lower is better) Translates to: TVIRTTRFIEICGSQGTRAGLGT*GAKVHG Trigger: GCCGTGAACCTTTGCACCCCATGTTCCCAGACCAGC...TCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CCA 90 bp | CACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGAAAAGTGGCTTTTCAGGCTaGTCTGGGAACATGGGGTGC | + |
Preference number: 4 (lower is better) Translates to: HKIYRNLWFTGNKTRGLKSGFSG*SGNMGC Trigger: GCACCCCATGTTCCCAGACCAGCCTGAAAAGCCACT...TTTCAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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3UTR CAA 72 bp | GCTGAGTCAGAGTATGTTGAAGGAAAACAATCCACTTaGGAAAGGAGCCCCCAAGAGCCCATTATTCCTGTT | + |
Preference number: 4 (lower is better) Translates to: AESEYVEGKQST*ERSPQEPIIPV Trigger: AACAGGAATAATGGGCTCTTGGGGGCTCCTTTCCAAAGTGGATTGTTTTCCTTCAACATACTCTGACTCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CAA 72 bp | CAATCACGTCCTTGGCTATCCTCAAGGCAAATGCTTTaGTTTAAAGAGCAGCCATGGAGATCGTTTCTGACC | + |
Preference number: 4 (lower is better) Translates to: QSRPWLSSRQML*FKEQPWRSFLT Trigger: GGTCAGAAACGATCTCCATGGCTGCTCTTTAAACAAAAGCATTTGCCTTGAGGATAGCCAAGGACGTGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CAA 72 bp | AATGGGGCTGGATTTGATGGGGTCCTGGCTTTAGTTTaGACTAAAGATCAGTATAAGCCATGGCCACTTGCA | + |
Preference number: 4 (lower is better) Translates to: NGAGFDGVLALV*TKDQYKPWPLA Trigger: TGCAAGTGGCCATGGCTTATACTGATCTTTAGTCAAAACTAAAGCCAGGACCCCATCAAATCCAGCCCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | ATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGAGTTCAGCAGGAGACTaGTGGACTGCTCCACGTGGA | + |
Preference number: 4 (lower is better) Translates to: IRTTRFIEICGSQGTRQESSAGD*WTAPRG Trigger: TCCACGTGGAGCAGTCCATCAGTCTCCTGCTGAACT...CTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR TCA 90 bp | AAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGAAAATGCTGTGGAGGAGGGTCTaGCATGAGCGTGTCCAAGAA | + |
Preference number: 4 (lower is better) Translates to: KIYRNLWFTGNKTRGLKMLWRRV*HERVQE Trigger: TTCTTGGACACGCTCATGTCAGACCCTCCTCCACAG...CATTTTCAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR TCA 90 bp | CTCAAAGAGCATAACATGAATTTGAAACTTAACACCCTCGAGGATCTGAACAAACTGTGGAGGAGGGTCTaGCATGAGCGTGTCCAAGAA | + |
Preference number: 4 (lower is better) Translates to: LKEHNMNLKLNTLEDLNKLWRRV*HERVQE Trigger: TTCTTGGACACGCTCATGTCAGACCCTCCTCCACAG...TTTGTTCAGATCCTCGAGGGTGTTAAGTTTCAAATTCATGTTATGCTCTTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | GAGCAGACATCAGTGCTAAATTATATCGCAACAGTTTGGCTCATGCATATAAGACTTCTCAGAGGTCGGTaGTGGAGCCAGATCCTCAAA | + |
Preference number: 4 (lower is better) Translates to: EQTSVLNYIATVWLMHIRLLRGR*WSQILK Trigger: TTTGAGGATCTGGCTCCATCACCGACCTCTGAGAAG...TCTTATATGCATGAGCCAAACTGTTGCGATATAATTTAGCACTGATGTCTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | ACCAGCTTCGATAGACGTGGGTGTGCAATTCATGGTGGGATAAGAAAGAACCATCCACCAGGTGCAAATTaGATTTCTTCTGCACAAATC | + |
Preference number: 4 (lower is better) Translates to: TSFDRRGCAIHGGIRKNHPPGAN*ISSAQI Trigger: GATTTGTGCAGAAGAAATGCAATTTGCACCTGGTGG...ATGGTTCTTTCTTATCCCACCATGAATTGCACACCCACGTCTATCGAAGCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
||
CDS-3UTR GCA 90 bp | AAACCTTCCCAAGGAATCACAAGTTGTTCTCCCTTCTCAACACAAAACCGGTCTATCGAAATCCCATCATaGTCTCACTGTGACAGTAGG | + |
Preference number: 4 (lower is better) Translates to: KPSQGITSCSPFSTQNRSIEIPS*SHCDSR Trigger: CCTACTGTCACAGTGAGAGCATGATGGGATTTCGAT...AGACCGGTTTTGTGTTGAGAAGGGAGAACAACTTGTGATTCCTTGGGAAGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | AATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACACTTATCTGGGAACATGGGGTaGAAAGGTTCACGGCTTGAA | + |
Preference number: 4 (lower is better) Translates to: NVSSATQGCHIYSIYLHLSGNMG*KGSRLE Trigger: TTCAAGCCGTGAACCTTTGCACCCCATGTTCCCAGA...TAAGTGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
||
CDS-3UTR GCA 90 bp | ACAACTGCATGCAGAACACCAGGTGTTCAGGTAAGGCAATCACCACTCAGAAAGCCTTTGCTGTTTATTTaGATCGATGGTGAAGGAGAT | + |
Preference number: 4 (lower is better) Translates to: TTACRTPGVQVRQSPLRKPLLFI*IDGEGD Trigger: ATCTCCTTCACCATCGATGCAAATAAACAGCAAAGG...CTTTCTGAGTGGTGATTGCCTTACCTGAACACCTGGTGTTCTGCATGCAGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR GCA 90 bp | CAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACACTTCCTTCTCGAACTTTGTaGAAACGCCTCTTGCACATC | + |
Preference number: 4 (lower is better) Translates to: QCELSNPRLPYLQYLSTLPSRTL*KRLLHI Trigger: GATGTGCAAGAGGCGTTTGCACAAAGTTCGAGAAGG...AAGTGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | TTGAACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC | + |
Preference number: 4 (lower is better) Translates to: LNQCELSNPRLPYLQYLSGRNRI*LTVLCN Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...AGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
||
CDS-3UTR CCA 90 bp | ATGAACCTTCCCTGCCTTATTATAGATCATCCGATAATCCATCTTCATAGTCTCTTCTCTGGCGTGGGCTaGGAAGCTTGCTCATGTTCT | + |
Preference number: 4 (lower is better) Translates to: MNLPCLIIDHPIIHLHSLFSGVG*EACSCS Trigger: AGAACATGAGCAAGCTTCCCAGCCCACGCCAGAGAA...GAGACTATGAAGATGGATTATCGGATGATCTATAATAAGGCAGGGAAGGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | TTGAACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTCTCAAGCATACATGGTaGGTTGTTCCGGAGCATGTT | + |
Preference number: 4 (lower is better) Translates to: LNQCELSNPRLPYLQYLSLKHTW*VVPEHV Trigger: AACATGCTCCGGAACAACCCACCATGTATGCTTGAG...AGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | AAGCCCAGTCTTGACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCATGCGATCCAGATCTTaGGCCCTCATCTCTGCAAAC | + |
Preference number: 4 (lower is better) Translates to: KPSLDSDKNHKIYRNLWFMRSRS*ALISAN Trigger: GTTTGCAGAGATGAGGGCTCAAGATCTGGATCGCAT...GAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGTCAAGACTGGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
||
CDS-3UTR TCA 90 bp | TTGAACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA | + |
Preference number: 4 (lower is better) Translates to: LNQCELSNPRLPYLQYLSETGSG*LFCVTK Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...AGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | CCTTTTTCACTCTTTGCTATACAACTCTATTCTAGAACAATGATTTCCACTTCCGAGGAGGGTCTGACATaGGCGTGTCCAAGAAGCCAT | + |
Preference number: 4 (lower is better) Translates to: PFSLFAIQLYSRTMISTSEEGLT*ACPRSH Trigger: ATGGCTTCTTGGACACGCTCATGTCAGACCCTCCTC...GGAAGTGGAAATCATTGTTCTAGAATAGAGTTGTATAGCAAAGAGTGAAAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
CDS-3UTR TCA 90 bp | AAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGAAAATGCGATGTGAGCCAAGTTaGGTGGCTTTTCAGGCTGGT | + |
Preference number: 4 (lower is better) Translates to: KIYRNLWFTGNKTRGLKMRCEPS*VAFQAG Trigger: ACCAGCCTGAAAAGCCACTCAACTTGGCTCACATCG...CATTTTCAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR TCA 90 bp | AAAGGAAAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTTCTACCCGAAGTCTCTaGATCTCTTGTAAGATTTCT | + |
Preference number: 4 (lower is better) Translates to: KGKMPYLLRTQWSSLLVASTRSL*ISCKIS Trigger: AGAAATCTTACAAGAGATTCAGAGACTTCGGGTAGA...AGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | AAACTTACCCCAACTTCCATCCTGACAAACCACAACCAGTTCCTGAATCCTATAAAATCTCAGCTTGCATaGTGTTCTGTAGGTGGAGAG | + |
Preference number: 4 (lower is better) Translates to: KLTPTSILTNHNQFLNPIKSQLA*CSVGGE Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTGAGATTT...TATAGGATTCAGGAACTGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | ATTTGTTCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCAAATCTCAGCTTGCATaGTGTTCTGTAGGTGGAGAG | + |
Preference number: 4 (lower is better) Translates to: ICSSSHRTISMGLDLMGSKSQLA*CSVGGE Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTGAGATTT...GGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGAACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | GGATCTGAACAAAACCTTCCCAAGGAATCACAAGTTGTTCTCCCTTCTCAACACCCACCAGGTGCAAATTaGATTTCTTCTGCACAAATC | + |
Preference number: 4 (lower is better) Translates to: GSEQNLPKESQVVLPSQHPPGAN*ISSAQI Trigger: GATTTGTGCAGAAGAAATGCAATTTGCACCTGGTGG...GTGTTGAGAAGGGAGAACAACTTGTGATTCCTTGGGAAGGTTTTGTTCAGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR GCA 90 bp | AACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACACACAGCTCAGGGACTTaGTTAATGCATTCGTTAGCT | + |
Preference number: 4 (lower is better) Translates to: NQCELSNPRLPYLQYLSTHSSGT*LMHSLA Trigger: AGCTAACGAATGCATTAAGCAAGTCCCTGAGCTGTG...TGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | AAGCCCAGTCTTGACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCAGAGTGTGTCGTTCATaGTGGTTACAGGTCTCGGAG | + |
Preference number: 4 (lower is better) Translates to: KPSLDSDKNHKIYRNLWFRVCRS*WLQVSE Trigger: CTCCGAGACCTGTAACCAGCATGAACGACACACTCT...GAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGTCAAGACTGGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR GCA 90 bp | ACCAGCTTCGATAGACGTGGGTGTGCAATTCATGGTGGGATAAGAAAGAACCATCCTTTGCTGTTTATTTaGATCGATGGTGAAGGAGAT | + |
Preference number: 4 (lower is better) Translates to: TSFDRRGCAIHGGIRKNHPLLFI*IDGEGD Trigger: ATCTCCTTCACCATCGATGCAAATAAACAGCAAAGG...ATGGTTCTTTCTTATCCCACCATGAATTGCACACCCACGTCTATCGAAGCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | TATCTATCTACACTTAACAGCCAAGAACTAATAACAGTGGACGAAGATGGTCAAATTGGTGATGGAGTCTaGAGCCACCAGCAGGTCACT | + |
Preference number: 4 (lower is better) Translates to: YLSTLNSQELITVDEDGQIGDGV*SHQQVT Trigger: AGTGACCTGCTGGTGGCTGCAGACTCCATCACCAAT...TTGACCATCTTCGTCCACTGTTATTAGTTCTTGGCTGTTAAGTGTAGATAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | AAGCCCAGTCTTGACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA | + |
Preference number: 4 (lower is better) Translates to: KPSLDSDKNHKIYRNLWFMLFCR*RVGCDP Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...GAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGTCAAGACTGGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CCA 90 bp | CATGGCCACTTGCAATCCACCACTGCATTTTTCTATTATATTCCTTGGTACTTTATGCTGTTCTGTAGGTaGAGAGTCGGATGCGATCCA | + |
Preference number: 4 (lower is better) Translates to: HGHLQSTTAFFYYIPWYFMLFCR*RVGCDP Trigger: TGGATCGCATCCGACTCTCCACCTACAGAACAGCAT...AAAGTACCAAGGAATATAATAGAAAAATGCAGTGGTGGATTGCAAGTGGCCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | AACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGGATTTGGTGAGTGGTTaGCATCCTCTTGTTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: NHKIYRNLWFTGNKTRGLDLVSG*HPLVEL Trigger: CAGCTCAACAAGAGGATGCCAACCACTCACCAAATC...CAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CCA 90 bp | AAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGAAAATGCTTTTCAGGCTGGTCTaGGAACATGGGGTGCAAAGG | + |
Preference number: 4 (lower is better) Translates to: KIYRNLWFTGNKTRGLKMLFRLV*EHGVQR Trigger: CCTTTGCACCCCATGTTCCCAGACCAGCCTGAAAAG...CATTTTCAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CCA 90 bp | CTCAAAGAGCATAACATGAATTTGAAACTTAACACCCTCGAGGATCTGAACAAACTTTTCAGGCTGGTCTaGGAACATGGGGTGCAAAGG | + |
Preference number: 4 (lower is better) Translates to: LKEHNMNLKLNTLEDLNKLFRLV*EHGVQR Trigger: CCTTTGCACCCCATGTTCCCAGACCAGCCTGAAAAG...TTTGTTCAGATCCTCGAGGGTGTTAAGTTTCAAATTCATGTTATGCTCTTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | CAGACATCAGTGCTAAATTATATCGCAACAGTTTGGCTCATGCATATAAGAAAAAGTGGCTTTTCAGGCTaGTCTGGGAACATGGGGTGC | + |
Preference number: 4 (lower is better) Translates to: QTSVLNYIATVWLMHIRKSGFSG*SGNMGC Trigger: GCACCCCATGTTCCCAGACCAGCCTGAAAAGCCACT...TTTTCTTATATGCATGAGCCAAACTGTTGCGATATAATTTAGCACTGATGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | AAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGAAAATGGTGAGCCAAGTTGAGTaGCTTTTCAGGCTGGTCTGG | + |
Preference number: 4 (lower is better) Translates to: KIYRNLWFTGNKTRGLKMVSQVE*LFRLVW Trigger: CCAGACCAGCCTGAAAAGCCACTCAACTTGGCTCAC...CATTTTCAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CCA 90 bp | TATCTATCTACACTTAACAGCCAAGAACTAATAACAGTGGACGAAGATGGTCAAGTGAGCCAAGTTGAGTaGCTTTTCAGGCTGGTCTGG | + |
Preference number: 4 (lower is better) Translates to: YLSTLNSQELITVDEDGQVSQVE*LFRLVW Trigger: CCAGACCAGCCTGAAAAGCCACTCAACTTGGCTCAC...TTGACCATCTTCGTCCACTGTTATTAGTTCTTGGCTGTTAAGTGTAGATAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | AAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGAAAATGGTGTGTCGTTCATGCTaGTTACAGGTCTCGGAGGCA | + |
Preference number: 4 (lower is better) Translates to: KIYRNLWFTGNKTRGLKMVCRSC*LQVSEA Trigger: TGCCTCCGAGACCTGTAACCAGCATGAACGACACAC...CATTTTCAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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3UTR CAA 72 bp | TTGTCTTTGACAGTTCTTTTACACACCAGCTTCCAGTaGAGTGTGACATCCCAATACCACACTGAAGAGCTT | + |
Preference number: 4 (lower is better) Translates to: LSLTVLLHTSFQ*SVTSQYHTEEL Trigger: AAGCTCTTCAGTGTGGTATTGGGATGTCACACTCAACTGGAAGCTGGTGTGTAAAAGAACTGTCAAAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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3UTR CAA 72 bp | GTTCTCCCTTCTCAACACAAAACCGGTCTTCATTTGTaGCCGTCAGTAGTAGTGACAGTTGTAACAGAATGT | + |
Preference number: 4 (lower is better) Translates to: VLPSQHKTGLHL*PSVVVTVVTEC Trigger: ACATTCTGTTACAACTGTCACTACTACTGACGGCAACAAATGAAGACCGGTTTTGTGTTGAGAAGGGAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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3UTR CAA 72 bp | GTTGTTCTCCCTTCTCAACACAAAACCGGTCTTCATTaGTTGCCGTCAGTAGTAGTGACAGTTGTAACAGAA | + |
Preference number: 4 (lower is better) Translates to: VVLPSQHKTGLH*LPSVVVTVVTE Trigger: TTCTGTTACAACTGTCACTACTACTGACGGCAACAAATGAAGACCGGTTTTGTGTTGAGAAGGGAGAACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | ATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGCGCGCAATGCTTCAATaGCGTTCCAAATGTCCACCA | + |
Preference number: 4 (lower is better) Translates to: IRTTRFIEICGSQGTRQERAMLQ*RSKCPP Trigger: TGGTGGACATTTGGAACGTCATTGAAGCATTGCGCG...CTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR TCA 90 bp | AGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACGAAACAGGATCTGGCTaGCTGTTCTGTGTAACCAAA | + |
Preference number: 4 (lower is better) Translates to: RTTRFIEICGSQGTRQEDETGSG*LFCVTK Trigger: TTTGGTTACACAGAACAGTCAGCCAGATCCTGTTTC...GTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR TCA 90 bp | GATCTTGTTAACCAACAGCTTTGGAGGGAACTAAAGAGGTGTGAAGTGGACAGTTCTACCCGAAGTCTCTaGATCTCTTGTAAGATTTCT | + |
Preference number: 4 (lower is better) Translates to: DLVNQQLWRELKRCEVDSSTRSL*ISCKIS Trigger: AGAAATCTTACAAGAGATTCAGAGACTTCGGGTAGA...ACTGTCCACTTCACACCTCTTTAGTTCCCTCCAAAGCTGTTGGTTAACAAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | AGGCTGCCATATTTACAGTATCTATCTACACTTAACAGCCAAGAACTAATAACAGCCAGATCCTCAAACTaGGGTCTCGAGAACTCGGAA | + |
Preference number: 4 (lower is better) Translates to: RLPYLQYLSTLNSQELITARSSN*GLENSE Trigger: TTCCGAGTTCTCGAGACCTCAGTTTGAGGATCTGGC...TGTTATTAGTTCTTGGCTGTTAAGTGTAGATAGATACTGTAAATATGGCAGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | AGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTTGAGCCCTCATCTCTaGAAACAGCTGTCTTCTTTC | + |
Preference number: 4 (lower is better) Translates to: RTTRFIEICGSQGTRQEDLSPHL*KQLSSF Trigger: GAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCAA...GTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR GCA 90 bp | ATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGTCTGGGAACATGGGGTaGAAAGGTTCACGGCTTGAA | + |
Preference number: 4 (lower is better) Translates to: IRTTRFIEICGSQGTRQESGNMG*KGSRLE Trigger: TTCAAGCCGTGAACCTTTGCACCCCATGTTCCCAGA...CTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR GCA 90 bp | CAACAAAATCCACCTGTGCAAAGAAATCAGAGAACTGTGCAGTTGTGCGACTTTGCAATCAGCTGCCTTTaGTGTTTATTTGCATCGATG | + |
Preference number: 4 (lower is better) Translates to: QQNPPVQRNQRTVQLCDFAISCL*CLFASM Trigger: CATCGATGCAAATAAACAGCAAAGGCAGCTGATTGC...AAAGTCGCACAACTGCACAGTTCTCTGATTTCTTTGCACAGGTGGATTTTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR GCA 90 bp | TTACAGTATCTATCTACACTTAACAGCCAAGAACTAATAACAGTGGACGAAGATAGCTCATTCTCCAGCTaGCGCACAGACTCGTTCTCA | + |
Preference number: 4 (lower is better) Translates to: LQYLSTLNSQELITVDEDSSFSS*RTDSFS Trigger: TGAGAACGAGTCTGTGCGGCAGCTGGAGAATGAGCT...ATCTTCGTCCACTGTTATTAGTTCTTGGCTGTTAAGTGTAGATAGATACTGTAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | AAACCTTCCCAAGGAATCACAAGTTGTTCTCCCTTCTCAACACAAAACCGGTCTACTTCCCGAAGGAATTaGTCATATCTTCCATATACC | + |
Preference number: 4 (lower is better) Translates to: KPSQGITSCSPFSTQNRSTSRRN*SYLPYT Trigger: GGTATATGGAAGATATGACCAATTCCTTCGGGAAGT...AGACCGGTTTTGTGTTGAGAAGGGAGAACAACTTGTGATTCCTTGGGAAGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CCA 90 bp | AAGCCCAGTCTTGACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCGGGAGAAACAGGATCTaGCTGACTGTTCTGTGTAAC | + |
Preference number: 4 (lower is better) Translates to: KPSLDSDKNHKIYRNLWFGRNRI*LTVLCN Trigger: GTTACACAGAACAGTCAGCCAGATCCTGTTTCTCCC...GAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGTCAAGACTGGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CCA 90 bp | TTACAGTATCTATCTACACTTAACAGCCAAGAACTAATAACAGTGGACGAAGATTCTCTCCGGCTCTCCTaGAGAGCAGACATTCTCTGT | + |
Preference number: 4 (lower is better) Translates to: LQYLSTLNSQELITVDEDSLRLS*RADILC Trigger: ACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGA...ATCTTCGTCCACTGTTATTAGTTCTTGGCTGTTAAGTGTAGATAGATACTGTAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | CAGACATCAGTGCTAAATTATATCGCAACAGTTTGGCTCATGCATATAAGAAAAATGAGACCTTCCAACTaGACCATCAGCTCTCTCCGG | + |
Preference number: 4 (lower is better) Translates to: QTSVLNYIATVWLMHIRKMRPSN*TISSLR Trigger: CCGGAGAGAGCTGATGGTCCAGTTGGAAGGTCTCAT...TTTTCTTATATGCATGAGCCAAACTGTTGCGATATAATTTAGCACTGATGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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3UTR CAA 72 bp | GCTAAGAAAAAGAAAAGGTGGCTGGTTAGTGAGAAATaGCTCACTGGTAGTGGTTTCCAGAGAGTTCTTGTA | + |
Preference number: 4 (lower is better) Translates to: AKKKKRWLVSEK*LTGSGFQRVLV Trigger: TACAAGAACTCTCTGGAAACCACTACCAGTGAGCAATTTCTCACTAACCAGCCACCTTTTCTTTTTCTTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
||
3UTR CAA 72 bp | GGTCCCGACAATAACCTCAAAGAGCATAACATGAATTaGAAACTTAACACCCTCGAGGATCTGAACAAAACC | + |
Preference number: 4 (lower is better) Translates to: GPDNNLKEHNMN*KLNTLEDLNKT Trigger: GGTTTTGTTCAGATCCTCGAGGGTGTTAAGTTTCAAATTCATGTTATGCTCTTTGAGGTTATTGTCGGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | ACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACTGCTGTGGGTAGTTTaGGAACTTCCCGAAGGAATT | + |
Preference number: 4 (lower is better) Translates to: TVIRTTRFIEICGSQGTRLLWVV*ELPEGI Trigger: AATTCCTTCGGGAAGTTCTCAAACTACCCACAGCAG...TCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR GCA 90 bp | CACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGAAAGACATTTTCTACATTTaGCAGTCGGTGCAGAAGAGG | + |
Preference number: 4 (lower is better) Translates to: HKIYRNLWFTGNKTRGLKDIFYI*QSVQKR Trigger: CCTCTTCTGCACCGACTGGCAAATGTAGAAAATGTC...TTTCAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR GCA 90 bp | TTACCCGATCTTTATGAGAAGAGTTTCTATGCCTTTTCAGAGAAATGGAAGCTGGACATTTTCTACATTTaGCAGTCGGTGCAGAAGAGG | + |
Preference number: 4 (lower is better) Translates to: LPDLYEKSFYAFSEKWKLDIFYI*QSVQKR Trigger: CCTCTTCTGCACCGACTGGCAAATGTAGAAAATGTC...CAGCTTCCATTTCTCTGAAAAGGCATAGAAACTCTTCTCATAAAGATCGGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
||
CDS-3UTR GCA 90 bp | GAGCAGACATCAGTGCTAAATTATATCGCAACAGTTTGGCTCATGCATATAAGACACAGCTCAGGGACTTaGTTAATGCATTCGTTAGCT | + |
Preference number: 4 (lower is better) Translates to: EQTSVLNYIATVWLMHIRHSSGT*LMHSLA Trigger: AGCTAACGAATGCATTAAGCAAGTCCCTGAGCTGTG...TCTTATATGCATGAGCCAAACTGTTGCGATATAATTTAGCACTGATGTCTGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR GCA 90 bp | ACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGAAAATCTCAGCTTGCATaGTGTTCTGTAGGTGGAGAG | + |
Preference number: 4 (lower is better) Translates to: TVIRTTRFIEICGSQGTRKSQLA*CSVGGE Trigger: CTCTCCACCTACAGAACAGCATGCAAGCTGAGATTT...TCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
||
CDS-3UTR GCA 90 bp | AAGCCCAGTCTTGACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCCCACCAGGTGCAAATTaGATTTCTTCTGCACAAATC | + |
Preference number: 4 (lower is better) Translates to: KPSLDSDKNHKIYRNLWFPPGAN*ISSAQI Trigger: GATTTGTGCAGAAGAAATGCAATTTGCACCTGGTGG...GAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGTCAAGACTGGGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR GCA 90 bp | AAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGAAAATGATCGAAATCCCATCATaGTCTCACTGTGACAGTAGG | + |
Preference number: 4 (lower is better) Translates to: KIYRNLWFTGNKTRGLKMIEIPS*SHCDSR Trigger: CCTACTGTCACAGTGAGAGCATGATGGGATTTCGAT...CATTTTCAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR GCA 90 bp | ATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGTCATTTGGTGCTGGTTaGTATGAGAACCTCCTGCAT | + |
Preference number: 4 (lower is better) Translates to: IRTTRFIEICGSQGTRQESFGAG*YENLLH Trigger: ATGCAGGAGGTTCTCATAGCAACCAGCACCAAATGA...CTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR GCA 90 bp | AAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGAAAATGCACAGCTCAGGGACTTaGTTAATGCATTCGTTAGCT | + |
Preference number: 4 (lower is better) Translates to: KIYRNLWFTGNKTRGLKMHSSGT*LMHSLA Trigger: AGCTAACGAATGCATTAAGCAAGTCCCTGAGCTGTG...CATTTTCAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
||
CDS-3UTR CCA 90 bp | AAGCCCAGTCTTGACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCATACCATCACTCCACTaGAGTCAGAGATCATTGAGA | + |
Preference number: 4 (lower is better) Translates to: KPSLDSDKNHKIYRNLWFIPSLH*SQRSLR Trigger: TCTCAATGATCTCTGACTCCAGTGGAGTGATGGTAT...GAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGTCAAGACTGGGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR TCA 90 bp | CATGGCCACTTGCAATCCACCACTGCATTTTTCTATTATATTCCTTGGTACTTTATCTTAACTTGTCCATaGTCTTTCCTCCACACAATG | + |
Preference number: 4 (lower is better) Translates to: HGHLQSTTAFFYYIPWYFILTCP*SFLHTM Trigger: CATTGTGTGGAGGAAAGATCATGGACAAGTTAAGAT...AAAGTACCAAGGAATATAATAGAAAAATGCAGTGGTGGATTGCAAGTGGCCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | AGGCTGCCATATTTACAGTATCTATCTACACTTAACAGCCAAGAACTAATAACATTCATCAAGCCGGTTTaGACTCTCAAGCATACTCCT | + |
Preference number: 4 (lower is better) Translates to: RLPYLQYLSTLNSQELITFIKPV*TLKHTP Trigger: AGGAGTATGCTTGAGAGTTCAAACCGGCTTGATGAA...TGTTATTAGTTCTTGGCTGTTAAGTGTAGATAGATACTGTAAATATGGCAGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR TCA 90 bp | GAGCAGACATCAGTGCTAAATTATATCGCAACAGTTTGGCTCATGCATATAAGATCTACCCGAAGTCTCTaGATCTCTTGTAAGATTTCT | + |
Preference number: 4 (lower is better) Translates to: EQTSVLNYIATVWLMHIRSTRSL*ISCKIS Trigger: AGAAATCTTACAAGAGATTCAGAGACTTCGGGTAGA...TCTTATATGCATGAGCCAAACTGTTGCGATATAATTTAGCACTGATGTCTGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | CTCAAAGAGCATAACATGAATTTGAAACTTAACACCCTCGAGGATCTGAACAAAATACCATCACTCCACTaGAGTCAGAGATCATTGAGA | + |
Preference number: 4 (lower is better) Translates to: LKEHNMNLKLNTLEDLNKIPSLH*SQRSLR Trigger: TCTCAATGATCTCTGACTCCAGTGGAGTGATGGTAT...TTTGTTCAGATCCTCGAGGGTGTTAAGTTTCAAATTCATGTTATGCTCTTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR TCA 90 bp | ATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGATCTTAACTTGTCCATaGTCTTTCCTCCACACAATG | + |
Preference number: 4 (lower is better) Translates to: IRTTRFIEICGSQGTRQEILTCP*SFLHTM Trigger: CATTGTGTGGAGGAAAGATCATGGACAAGTTAAGAT...CTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CCA 90 bp | AGGCTGCCATATTTACAGTATCTATCTACACTTAACAGCCAAGAACTAATAACAATACCATCACTCCACTaGAGTCAGAGATCATTGAGA | + |
Preference number: 4 (lower is better) Translates to: RLPYLQYLSTLNSQELITIPSLH*SQRSLR Trigger: TCTCAATGATCTCTGACTCCAGTGGAGTGATGGTAT...TGTTATTAGTTCTTGGCTGTTAAGTGTAGATAGATACTGTAAATATGGCAGCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CCA 90 bp | AAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGAAAATGACTTCCCGAAGGAATTaGTCATATCTTCCATATACC | + |
Preference number: 4 (lower is better) Translates to: KIYRNLWFTGNKTRGLKMTSRRN*SYLPYT Trigger: GGTATATGGAAGATATGACCAATTCCTTCGGGAAGT...CATTTTCAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CCA 90 bp | GCAGACATCAGTGCTAAATTATATCGCAACAGTTTGGCTCATGCATATAAGAAAACTTCCCGAAGGAATTaGTCATATCTTCCATATACC | + |
Preference number: 4 (lower is better) Translates to: ADISAKLYRNSLAHAYKKTSRRN*SYLPYT Trigger: GGTATATGGAAGATATGACCAATTCCTTCGGGAAGT...TTTCTTATATGCATGAGCCAAACTGTTGCGATATAATTTAGCACTGATGTCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR TCA 90 bp | CAGACATCAGTGCTAAATTATATCGCAACAGTTTGGCTCATGCATATAAGAAAAATCTTAACTTGTCCATaGTCTTTCCTCCACACAATG | + |
Preference number: 4 (lower is better) Translates to: QTSVLNYIATVWLMHIRKILTCP*SFLHTM Trigger: CATTGTGTGGAGGAAAGATCATGGACAAGTTAAGAT...TTTTCTTATATGCATGAGCCAAACTGTTGCGATATAATTTAGCACTGATGTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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3UTR CAA 72 bp | CTTGCAATCCACCACTGCATTTTTCTATTATATTCCTaGGTACTTTTCTATAACGATCTGAATGAAGGCTTG | + |
Preference number: 4 (lower is better) Translates to: LAIHHCIFLLYS*VLFYNDLNEGL Trigger: CAAGCCTTCATTCAGATCGTTATAGAAAAGTACCAAGGAATATAATAGAAAAATGCAGTGGTGGATTGCAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS TCA 90 bp | GAGGGAGTCCTGCGGGGTGTGCGTTGGTGTGGGACAGGCAGATGCTaGACGGATGGGCATGGGGATCGGCCTGCTGATGGTGTGGCTGGG | + |
Preference number: 5 (lower is better) Translates to: EGVLRGVRWCGTGRC*TDGHGDRPADGVAG Trigger: CCCAGCCACACCATCAGCAGGCCGATCCCCATGCCCATCCGTTCAGCATCTGCCTGTCCCACACCAACGCACACCCCGCAGGACTCCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS GCA 90 bp | GCAAACGCCTCTTGCACATCTCCGCCTACCCCAGTGAGGGAGTCCTaGGGGGTGTGCGTTGGTGTGGGACAGGCAGATGCTGAACGGATG | + |
Preference number: 5 (lower is better) Translates to: ANASCTSPPTPVRES*GVCVGVGQADAERM Trigger: CATCCGTTCAGCATCTGCCTGTCCCACACCAACGCACACCCCGCAGGACTCCCTCACTGGGGTAGGCGGAGATGTGCAAGAGGCGTTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS TCA 90 bp | GGCCTTCCGGGTCAAAGGCTGCGAGCAGGAAGTTCAGCAGGAGACTaGTGGACTGCTCCACGTGGATTTGGTGAGTGGTTGGCATCCTCT | + |
Preference number: 5 (lower is better) Translates to: GLPGQRLRAGSSAGD*WTAPRGFGEWLASS Trigger: AGAGGATGCCAACCACTCACCAAATCCACGTGGAGCAGTCCATCAGTCTCCTGCTGAACTTCCTGCTCGCAGCCTTTGACCCGGAAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CCA 90 bp | GTTGCGTGTAAGGATCCCCATCTTCCGGGACCATGTCACCATGCGTaGTACTTGCAGCTCCACCGTGAATGTACCCAGGTTTCCGGGAGT | + |
Preference number: 5 (lower is better) Translates to: VACKDPHLPGPCHHA*YLQLHRECTQVSGS Trigger: ACTCCCGGAAACCTGGGTACATTCACGGTGGAGCTGCAAGTACCACGCATGGTGACATGGTCCCGGAAGATGGGGATCCTTACACGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS TCA 90 bp | TCTTCCGGGACCATGTCACCATGCGTGGTACTTGCAGCTCCACCGTaGATGTACCCAGGTTTCCGGGAGTGGATTTGGGCTAGAAAAGCC | + |
Preference number: 5 (lower is better) Translates to: SSGTMSPCVVLAAPP*MYPGFREWIWARKA Trigger: GGCTTTTCTAGCCCAAATCCACTCCCGGAAACCTGGGTACATTCACGGTGGAGCTGCAAGTACCACGCATGGTGACATGGTCCCGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS GCA 90 bp | GTAAGGATCCCCATCTTCCGGGACCATGTCACCATGCGTGGTACTTaGAGCTCCACCGTGAATGTACCCAGGTTTCCGGGAGTGGATTTG | + |
Preference number: 5 (lower is better) Translates to: VRIPIFRDHVTMRGT*SSTVNVPRFPGVDL Trigger: CAAATCCACTCCCGGAAACCTGGGTACATTCACGGTGGAGCTGCAAGTACCACGCATGGTGACATGGTCCCGGAAGATGGGGATCCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS CCA 90 bp | CATGCTGGTTACAGGTCTCGGAGGCACGATGTGAGCCAAGTTGAGTaGCTTTTCAGGCTGGTCTGGGAACATGGGGTGCAAAGGTTCACG | + |
Preference number: 5 (lower is better) Translates to: HAGYRSRRHDVSQVE*LFRLVWEHGVQRFT Trigger: CGTGAACCTTTGCACCCCATGTTCCCAGACCAGCCTGAAAAGCCACTCAACTTGGCTCACATCGTGCCTCCGAGACCTGTAACCAGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CCA 90 bp | TGGGCTGTGATGAGGAGGATTCTGCTGCCAGTCGTGCGGCGTACCTaGCGATCAGCCTGTGTTCTTCATCAAGCCGGTTTGAACTCTCAA | + |
Preference number: 5 (lower is better) Translates to: WAVMRRILLPVVRRT*RSACVLHQAGLNSQ Trigger: TTGAGAGTTCAAACCGGCTTGATGAAGAACACAGGCTGATCGCCAGGTACGCCGCACGACTGGCAGCAGAATCCTCCTCATCACAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | ACACGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCAAAGAGCGTGGGGAGCTaGCCCCCTGGGTCTTCAGGA | + |
Preference number: 5 (lower is better) Translates to: TRLPLTNQTYPNFHPDKPKSVGS*PPGSSG Trigger: TCCTGAAGACCCAGGGGGCAAGCTCCCCACGCTCTT...TGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR CAA 90 bp | GGTAGGTTTAATCATTTCTCAGAGGGACTTGGGGACATGGGTAGGCCAAGGACCTCCAGGCGGGCCACGTaGAGTTCTATGTTTGGGTCC | + |
Preference number: 5 (lower is better) Translates to: GRFNHFSEGLGDMGRPRTSRRAT*SSMFGS Trigger: GGACCCAAACATAGAACTCAACGTGGCCCGCCTGGA...GGTCCTTGGCCTACCCATGTCCCCAAGTCCCTCTGAGAAATGATTAAACCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR CAA 90 bp | CTGTGGGGAGGCTTGGCTGTGCTAGATCAATGCTCATTCATAGGCCACCAGCTTCTGCTCCACGTGGATTaGGTGAGTGGTTGGCATCCT | + |
Preference number: 5 (lower is better) Translates to: LWGGLAVLDQCSFIGHQLLLHVD*VSGWHP Trigger: AGGATGCCAACCACTCACCAAATCCACGTGGAGCAG...AAGCTGGTGGCCTATGAATGAGCATTGATCTAGCACAGCCAAGCCTCCCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | AGTTCAGTCCAGCCAGCGACTGAGGGCCACCAGCAGGGTCTGAGGTCTAATGTAGCACAGCTCAGGGACTaGCTTAATGCATTCGTTAGC | + |
Preference number: 5 (lower is better) Translates to: SSVQPATEGHQQGLRSNVAQLRD*LNAFVS Trigger: GCTAACGAATGCATTAAGCAAGTCCCTGAGCTGTGC...TACATTAGACCTCAGACCCTGCTGGTGGCCCTCAGTCGCTGGCTGGACTGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS CCA 90 bp | AGTGGAGAGCACCGCCTCCAGGCGGGCCACGTTGAGTTCTATGTTTaGGTCCAGGTTATTCAAAGCGTTTTCGCGCAATGCTTCAATGAC | + |
Preference number: 5 (lower is better) Translates to: SGEHRLQAGHVEFYV*VQVIQSVFAQCFND Trigger: GTCATTGAAGCATTGCGCGAAAACGCTTTGAATAACCTGGACCCAAACATAGAACTCAACGTGGCCCGCCTGGAGGCGGTGCTCTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | TCTCCAACACGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACGCAAAGGTTCACGGCTaGAAGCACAGCTCAGGGACT | + |
Preference number: 5 (lower is better) Translates to: SPTRLPLTNQTYPNFHPDAKVHG*KHSSGT Trigger: AGTCCCTGAGCTGTGCTTCAAGCCGTGAACCTTTGC...GTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACGTGTTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS TCA 90 bp | CTAGCTCTGCAATCAGCTGCCTTTGCTGTTTATTTGCATCGATGGTaGAGGAGATGTCAGGGGCACTCCTCTGCTGTGTGGGCTGTGATG | + |
Preference number: 5 (lower is better) Translates to: LALQSAAFAVYLHRW*RRCQGHSSAVWAVM Trigger: CATCACAGCCCACACAGCAGAGGAGTGCCCCTGACATCTCCTTCACCATCGATGCAAATAAACAGCAAAGGCAGCTGATTGCAGAGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS GCA 90 bp | GAACACTCAACTGGATGGAAGACATTTTCTACATTTGCCAGTCGGTaGAGAAGAGGCAGCCATACCAGGCACTGTGGAGGAGGGTCTGAC | + |
Preference number: 5 (lower is better) Translates to: EHSTGWKTFSTFASR*RRGSHTRHCGGGSD Trigger: GTCAGACCCTCCTCCACAGTGCCTGGTATGGCTGCCTCTTCTGCACCGACTGGCAAATGTAGAAAATGTCTTCCATCCAGTTGAGTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | CTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAACCACTGCTCCACGTGGATTaGGTGAGTGGTTGGCATCCT | + |
Preference number: 5 (lower is better) Translates to: LPLTNQTYPNFHPDKPQPLLHVD*VSGWHP Trigger: AGGATGCCAACCACTCACCAAATCCACGTGGAGCAG...TGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | CTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAATTGAACCAAGCACAGCTCAGGGACTaGCTTAATGCATTCGTTAGC | + |
Preference number: 5 (lower is better) Translates to: LRTQWSSLLVAPCVELNQAQLRD*LNAFVS Trigger: GCTAACGAATGCATTAAGCAAGTCCCTGAGCTGTGC...TTGGTTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | GTTTGCTCTTGTGGGGCTGCAGCTTGGGCAACAACATTGACATTTGAGGAGCTCGCCCTAGCCAGCATTTaGTTCTGTTCTACTTCACTG | + |
Preference number: 5 (lower is better) Translates to: VCSCGAAAWATTLTFEELALASI*FCSTSL Trigger: CAGTGAAGTAGAACAGAACAAAATGCTGGCTAGGGC...GAGCTCCTCAAATGTCAATGTTGTTGCCCAAGCTGCAGCCCCACAAGAGCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS TCA 90 bp | AGAAAAGCCTTCTCAGAGGTCGGTGATGGAGCCAGATCCTCAAACTaGGGTCTCGAGAACTCGGAATCCACAGTACTTTCTGTTTCACTC | + |
Preference number: 5 (lower is better) Translates to: RKAFSEVGDGARSSN*GLENSESTVLSVSL Trigger: GAGTGAAACAGAAAGTACTGTGGATTCCGAGTTCTCGAGACCTCAGTTTGAGGATCTGGCTCCATCACCGACCTCTGAGAAGGCTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS GCA 90 bp | CACCAGGTGCAAATTGCATTTCTTCTGCACAAATCTCAGCTTGCATaGTGTTCTGTAGGTGGAGAGTCGGATGCGATCCAGATCTTGAGC | + |
Preference number: 5 (lower is better) Translates to: HQVQIAFLLHKSQLA*CSVGGESDAIQILS Trigger: GCTCAAGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCATGCAAGCTGAGATTTGTGCAGAAGAAATGCAATTTGCACCTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | ATTTGTTCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCTCCAGGCGGGCCACGTaGAGTTCTATGTTTGGGTCC | + |
Preference number: 5 (lower is better) Translates to: ICSSSHRTISMGLDLMGSSRRAT*SSMFGS Trigger: GGACCCAAACATAGAACTCAACGTGGCCCGCCTGGA...GGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGAACAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | AAACCTTCCCAAGGAATCACAAGTTGTTCTCCCTTCTCAACACAAAACCGGTCTCTGCTCCACGTGGATTaGGTGAGTGGTTGGCATCCT | + |
Preference number: 5 (lower is better) Translates to: KPSQGITSCSPFSTQNRSLLHVD*VSGWHP Trigger: AGGATGCCAACCACTCACCAAATCCACGTGGAGCAG...AGACCGGTTTTGTGTTGAGAAGGGAGAACAACTTGTGATTCCTTGGGAAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | GGAAAAATGCCCTACCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTACTGCTGTGGGTAGTTaGAGAACTTCCCGAAGGAAT | + |
Preference number: 5 (lower is better) Translates to: GKMPYLLRTQWSSLLVAPTAVGS*RTSRRN Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACAGCAGT...AGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGGTAGGGCATTTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | CTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAACCAGTTCCTGGTGACCTTTTTCTGTaGGGAGAAACAGGATCTGGC | + |
Preference number: 5 (lower is better) Translates to: LTNQTYPNFHPDKPQPVPGDLFL*GETGSG Trigger: GCCAGATCCTGTTTCTCCCAACAGAAAAAGGTCACC...AGGAACTGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | CTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAATTGAACCAACTTCATCAAGCCGGTTaGAACTCTCAAGCATACTCC | + |
Preference number: 5 (lower is better) Translates to: LRTQWSSLLVAPCVELNQLHQAG*NSQAYS Trigger: GGAGTATGCTTGAGAGTTCAAACCGGCTTGATGAAG...TTGGTTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR CAA 90 bp | CTGTGGGGAGGCTTGGCTGTGCTAGATCAATGCTCATTCATAGGCCACCAGCTTTGCAATCAGCTGCCTTaGCTGTTTATTTGCATCGAT | + |
Preference number: 5 (lower is better) Translates to: LWGGLAVLDQCSFIGHQLCNQLP*LFICID Trigger: ATCGATGCAAATAAACAGCAAAGGCAGCTGATTGCA...AAGCTGGTGGCCTATGAATGAGCATTGATCTAGCACAGCCAAGCCTCCCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS TCA 90 bp | CTTTCCTCCACACAATGTAGCCAAAGCCATTTTGACAGCAAATACTaGGATTTTTCCATGGCCTTCCGGGTCAAAGGCTGCGAGCAGGAA | + |
Preference number: 5 (lower is better) Translates to: LSSTQCSQSHFDSKY*DFSMAFRVKGCEQE Trigger: TTCCTGCTCGCAGCCTTTGACCCGGAAGGCCATGGAAAAATCTCAGTATTTGCTGTCAAAATGGCTTTGGCTACATTGTGTGGAGGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | TGTGAGATACAGTTGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCAGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA | + |
Preference number: 5 (lower is better) Translates to: CEIQLNRMDRRMKPAGFADAIQI*SPHLCK Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...TGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAACTGTATCTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | CCTTCTGAGGACACAGTGGAGTTCTTTGCTTGTGGCTCCTTGCGTGGAATTGAAGTAGTTGTGACACTGTaGACATCGGTATCGAAATCC | + |
Preference number: 5 (lower is better) Translates to: PSEDTVEFFACGSLRGIEVVVTL*TSVSKS Trigger: GGATTTCGATACCGATGTCAACAGTGTCACAACTAC...TTCAATTCCACGCAAGGAGCCACAAGCAAAGAACTCCACTGTGTCCTCAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | AGGGTGTTATATATCCTAGACTGGCCTCAAATTCACTATGTAGCTGAGGATGACGCAAAGGTTCACGGCTaGAAGCACAGCTCAGGGACT | + |
Preference number: 5 (lower is better) Translates to: RVLYILDWPQIHYVAEDDAKVHG*KHSSGT Trigger: AGTCCCTGAGCTGTGCTTCAAGCCGTGAACCTTTGC...GTCATCCTCAGCTACATAGTGAATTTGAGGCCAGTCTAGGATATATAACACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS-3UTR CAA 90 bp | CTGCCCAGAGGGAGGAGGGAGCTTAGATTAGAGCAGCTTTTCTGTTTCTACATGTTGTTCCGGAGCATGTaGACATACAACCCAATGAGA | + |
Preference number: 5 (lower is better) Translates to: LPRGRRELRLEQLFCFYMLFRSM*TYNPMR Trigger: TCTCATTGGGTTGTATGTCAACATGCTCCGGAACAA...CATGTAGAAACAGAAAAGCTGCTCTAATCTAAGCTCCCTCCTCCCTCTGGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | CGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAACCACAACTTCATCAAGCCGGTTaGAACTCTCAAGCATACATG | + |
Preference number: 5 (lower is better) Translates to: RLPLTNQTYPNFHPDKPQLHQAG*NSQAYM Trigger: CATGTATGCTTGAGAGTTCAAACCGGCTTGATGAAG...TTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | GCGGGGCAAAGTCTGTTTGCAAAGAGTTATCAAGGGATACACCCTGCCATGATCCTTCATCAAGCCGGTTaGAACTCTCAAGCATACATG | + |
Preference number: 5 (lower is better) Translates to: AGQSLFAKSYQGIHPAMILHQAG*NSQAYM Trigger: CATGTATGCTTGAGAGTTCAAACCGGCTTGATGAAG...GATCATGGCAGGGTGTATCCCTTGATAACTCTTTGCAAACAGACTTTGCCCCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | ACTTACCCCAACTTCCATCCTGACAAACCACAACCAGTTCCTGAATCCTATACAACAACACACGCCATTTaGTCTCGGCTACAGGACAGG | + |
Preference number: 5 (lower is better) Translates to: TYPNFHPDKPQPVPESYTTTHAI*SRLQDR Trigger: CCTGTCCTGTAGCCGAGACAAAATGGCGTGTGTTGT...TGTATAGGATTCAGGAACTGGTTGTGGTTTGTCAGGATGGAAGTTGGGGTAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222726.2 |
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CDS-3UTR CAA 90 bp | AGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACCTGCTCCACGTGGATTaGGTGAGTGGTTGGCATCCT | + |
Preference number: 5 (lower is better) Translates to: RTTRFIEICGSQGTRQEDLLHVD*VSGWHP Trigger: AGGATGCCAACCACTCACCAAATCCACGTGGAGCAG...GTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CAA 90 bp | GGATCTGAACAAAACCTTCCCAAGGAATCACAAGTTGTTCTCCCTTCTCAACACGGTGACCTTTTTCTGTaGGGAGAAACAGGATCTGGC | + |
Preference number: 5 (lower is better) Translates to: GSEQNLPKESQVVLPSQHGDLFL*GETGSG Trigger: GCCAGATCCTGTTTCTCCCAACAGAAAAAGGTCACC...GTGTTGAGAAGGGAGAACAACTTGTGATTCCTTGGGAAGGTTTTGTTCAGATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | CCTGCTGGGTTTGCATTTAGAACAGGCCCCAAAAGTAAATTTGGAGAGCCAAGGGTAGTTGTGACACTGTaGACATCGGTATCGAAATCC | + |
Preference number: 5 (lower is better) Translates to: PAGFAFRTGPKSKFGEPRVVVTL*TSVSKS Trigger: GGATTTCGATACCGATGTCAACAGTGTCACAACTAC...CCTTGGCTCTCCAAATTTACTTTTGGGGCCTGTTCTAAATGCAAACCCAGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | ATTTGTTCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA | + |
Preference number: 5 (lower is better) Translates to: ICSSSHRTISMGLDLMGSDAIQI*SPHLCK Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...GGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGAACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | ACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGATCCAGGCGGGCCACGTaGAGTTCTATGTTTGGGTCC | + |
Preference number: 5 (lower is better) Translates to: TVIRTTRFIEICGSQGTRSRRAT*SSMFGS Trigger: GGACCCAAACATAGAACTCAACGTGGCCCGCCTGGA...TCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CAA 90 bp | TATCTATCTACACTTAACAGCCAAGAACTAATAACAGTGGACGAAGATGGTCAATCCAGGCGGGCCACGTaGAGTTCTATGTTTGGGTCC | + |
Preference number: 5 (lower is better) Translates to: YLSTLNSQELITVDEDGQSRRAT*SSMFGS Trigger: GGACCCAAACATAGAACTCAACGTGGCCCGCCTGGA...TTGACCATCTTCGTCCACTGTTATTAGTTCTTGGCTGTTAAGTGTAGATAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | CTGCCCAGAGGGAGGAGGGAGCTTAGATTAGAGCAGCTTTTCTGTTTCTACATGGTAGCCAAAGCCATTTaGACAGCAAATACTGAGATT | + |
Preference number: 5 (lower is better) Translates to: LPRGRRELRLEQLFCFYMVAKAI*TANTEI Trigger: AATCTCAGTATTTGCTGTCAAAATGGCTTTGGCTAC...CATGTAGAAACAGAAAAGCTGCTCTAATCTAAGCTCCCTCCTCCCTCTGGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | CCAACACGTCTCCCTCTGACCAACCAAACTTACCCCAACTTCCATCCTGACAAAAACTTCCCGAAGGAATaGGTCATATCTTCCATATAC | + |
Preference number: 5 (lower is better) Translates to: PTRLPLTNQTYPNFHPDKNFPKE*VISSIY Trigger: GTATATGGAAGATATGACCAATTCCTTCGGGAAGTT...TTTGTCAGGATGGAAGTTGGGGTAAGTTTGGTTGGTCAGAGGGAGACGTGTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | TTGAACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTGGTGACCTTTTTCTGTaGGGAGAAACAGGATCTGGC | + |
Preference number: 5 (lower is better) Translates to: LNQCELSNPRLPYLQYLSGDLFL*GETGSG Trigger: GCCAGATCCTGTTTCTCCCAACAGAAAAAGGTCACC...AGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | TTACCCGATCTTTATGAGAAGAGTTTCTATGCCTTTTCAGAGAAATGGAAGCTGGCAAAGGTTCACGGCTaGAAGCACAGCTCAGGGACT | + |
Preference number: 5 (lower is better) Translates to: LPDLYEKSFYAFSEKWKLAKVHG*KHSSGT Trigger: AGTCCCTGAGCTGTGCTTCAAGCCGTGAACCTTTGC...CAGCTTCCATTTCTCTGAAAAGGCATAGAAACTCTTCTCATAAAGATCGGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | CCTGACAAACCACAACCAGTTCCTGAATCCTATACAGTAGATTTCACCCACCTCTTGTTCCGGAGCATGTaGACATACAACCCAATGAGA | + |
Preference number: 5 (lower is better) Translates to: PDKPQPVPESYTVDFTHLLFRSM*TYNPMR Trigger: TCTCATTGGGTTGTATGTCAACATGCTCCGGAACAA...GAGGTGGGTGAAATCTACTGTATAGGATTCAGGAACTGGTTGTGGTTTGTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | TCTTACAGGATTGAACACATCTATGAGCACAGGATGGGTGGCATAGCTTATGTTAGCATACATGGTGGGTaGTTCCGGAGCATGTTGACA | + |
Preference number: 5 (lower is better) Translates to: SYRIEHIYEHRMGGIAYVSIHGG*FRSMLT Trigger: TGTCAACATGCTCCGGAACAACCCACCATGTATGCT...AACATAAGCTATGCCACCCATCCTGTGCTCATAGATGTGTTCAATCCTGTAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS TCA 90 bp | TGTTTGGGTCCAGGTTATTCAAAGCGTTTTCGCGCAATGCTTCAATaGCGTTCCAAATGTCCACCAGGTGCAAATTGCATTTCTTCTGCA | + |
Preference number: 5 (lower is better) Translates to: CLGPGYSKRFRAMLQ*RSKCPPGANCISSA Trigger: TGCAGAAGAAATGCAATTTGCACCTGGTGGACATTTGGAACGTCATTGAAGCATTGCGCGAAAACGCTTTGAATAACCTGGACCCAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | AACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACAACTGCTGTGGGTAGTTaGAGAACTTCCCGAAGGAAT | + |
Preference number: 5 (lower is better) Translates to: NQCELSNPRLPYLQYLSTTAVGS*RTSRRN Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACAGCAGT...TGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | ACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGAGCAAAGGTTCACGGCTaGAAGCACAGCTCAGGGACT | + |
Preference number: 5 (lower is better) Translates to: TVIRTTRFIEICGSQGTRAKVHG*KHSSGT Trigger: AGTCCCTGAGCTGTGCTTCAAGCCGTGAACCTTTGC...TCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS GCA 90 bp | GAGTTCTATGTTTGGGTCCAGGTTATTCAAAGCGTTTTCGCGCAATaGTTCAATGACGTTCCAAATGTCCACCAGGTGCAAATTGCATTT | + |
Preference number: 5 (lower is better) Translates to: EFYVWVQVIQSVFAQ*FNDVPNVHQVQIAF Trigger: AAATGCAATTTGCACCTGGTGGACATTTGGAACGTCATTGAAGCATTGCGCGAAAACGCTTTGAATAACCTGGACCCAAACATAGAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | TTGAACAGAATGGACAGACGGATGAAACCTGCTGGGTTTGCATTTAGAACAGGCGTAGCCAAAGCCATTTaGACAGCAAATACTGAGATT | + |
Preference number: 5 (lower is better) Translates to: LNRMDRRMKPAGFAFRTGVAKAI*TANTEI Trigger: AATCTCAGTATTTGCTGTCAAAATGGCTTTGGCTAC...GCCTGTTCTAAATGCAAACCCAGCAGGTTTCATCCGTCTGTCCATTCTGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | CACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGAAAGGTGACCTTTTTCTGTaGGGAGAAACAGGATCTGGC | + |
Preference number: 5 (lower is better) Translates to: HKIYRNLWFTGNKTRGLKGDLFL*GETGSG Trigger: GCCAGATCCTGTTTCTCCCAACAGAAAAAGGTCACC...TTTCAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CAA 90 bp | TCTTACAGGATTGAACACATCTATGAGCACAGGATGGGTGGCATAGCTTATGTTGTAGTTGTGACACTGTaGACATCGGTATCGAAATCC | + |
Preference number: 5 (lower is better) Translates to: SYRIEHIYEHRMGGIAYVVVVTL*TSVSKS Trigger: GGATTTCGATACCGATGTCAACAGTGTCACAACTAC...AACATAAGCTATGCCACCCATCCTGTGCTCATAGATGTGTTCAATCCTGTAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | CACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGAAAGCACAGCTCAGGGACTaGCTTAATGCATTCGTTAGC | + |
Preference number: 5 (lower is better) Translates to: HKIYRNLWFTGNKTRGLKAQLRD*LNAFVS Trigger: GCTAACGAATGCATTAAGCAAGTCCCTGAGCTGTGC...TTTCAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CAA 90 bp | AATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACACTTAGCCCTAGCCAGCATTTaGTTCTGTTCTACTTCACTG | + |
Preference number: 5 (lower is better) Translates to: NVSSATQGCHIYSIYLHLALASI*FCSTSL Trigger: CAGTGAAGTAGAACAGAACAAAATGCTGGCTAGGGC...TAAGTGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | ACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGAGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA | + |
Preference number: 5 (lower is better) Translates to: TVIRTTRFIEICGSQGTRDAIQI*SPHLCK Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...TCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CAA 90 bp | CCAAGGCTGCCATATTTACAGTATCTATCTACACTTAACAGCCAAGAACTAATAGATGCGATCCAGATCTaGAGCCCTCATCTCTGCAAA | + |
Preference number: 5 (lower is better) Translates to: PRLPYLQYLSTLNSQELIDAIQI*SPHLCK Trigger: TTTGCAGAGATGAGGGCTCAAGATCTGGATCGCATC...TATTAGTTCTTGGCTGTTAAGTGTAGATAGATACTGTAAATATGGCAGCCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | GGATCTGAACAAAACCTTCCCAAGGAATCACAAGTTGTTCTCCCTTCTCAACACAACTTCCCGAAGGAATaGGTCATATCTTCCATATAC | + |
Preference number: 5 (lower is better) Translates to: GSEQNLPKESQVVLPSQHNFPKE*VISSIY Trigger: GTATATGGAAGATATGACCAATTCCTTCGGGAAGTT...GTGTTGAGAAGGGAGAACAACTTGTGATTCCTTGGGAAGGTTTTGTTCAGATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | CATGGCCACTTGCAATCCACCACTGCATTTTTCTATTATATTCCTTGGTACTTTACTGCTGTGGGTAGTTaGAGAACTTCCCGAAGGAAT | + |
Preference number: 5 (lower is better) Translates to: HGHLQSTTAFFYYIPWYFTAVGS*RTSRRN Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACAGCAGT...AAAGTACCAAGGAATATAATAGAAAAATGCAGTGGTGGATTGCAAGTGGCCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | CTCAAAGAGCATAACATGAATTTGAAACTTAACACCCTCGAGGATCTGAACAAAGCACAGCTCAGGGACTaGCTTAATGCATTCGTTAGC | + |
Preference number: 5 (lower is better) Translates to: LKEHNMNLKLNTLEDLNKAQLRD*LNAFVS Trigger: GCTAACGAATGCATTAAGCAAGTCCCTGAGCTGTGC...TTTGTTCAGATCCTCGAGGGTGTTAAGTTTCAAATTCATGTTATGCTCTTTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | ATTTGTTCATCTTCTCATAGAACTATCTCAATGGGGCTGGATTTGATGGGGTCCTGCAATCAGCTGCCTTaGCTGTTTATTTGCATCGAT | + |
Preference number: 5 (lower is better) Translates to: ICSSSHRTISMGLDLMGSCNQLP*LFICID Trigger: ATCGATGCAAATAAACAGCAAAGGCAGCTGATTGCA...GGACCCCATCAAATCCAGCCCCATTGAGATAGTTCTATGAGAAGATGAACAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221880.2 |
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CDS-3UTR CAA 90 bp | CCAAGGCTGCCATATTTACAGTATCTATCTACACTTAACAGCCAAGAACTAATAAGCATACATGGTGGGTaGTTCCGGAGCATGTTGACA | + |
Preference number: 5 (lower is better) Translates to: PRLPYLQYLSTLNSQELISIHGG*FRSMLT Trigger: TGTCAACATGCTCCGGAACAACCCACCATGTATGCT...TATTAGTTCTTGGCTGTTAAGTGTAGATAGATACTGTAAATATGGCAGCCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | AACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACTGTCCACCAGGTGCAAATaGCATTTCTTCTGCACAAAT | + |
Preference number: 5 (lower is better) Translates to: NHKIYRNLWFTGNKTRGLSTRCK*HFFCTN Trigger: ATTTGTGCAGAAGAAATGCAATTTGCACCTGGTGGA...CAGTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CAA 90 bp | AACCAATGTGAGCTCAGCAACCCAAGGCTGCCATATTTACAGTATCTATCTACAAACTTCCCGAAGGAATaGGTCATATCTTCCATATAC | + |
Preference number: 5 (lower is better) Translates to: NQCELSNPRLPYLQYLSTNFPKE*VISSIY Trigger: GTATATGGAAGATATGACCAATTCCTTCGGGAAGTT...TGTAGATAGATACTGTAAATATGGCAGCCTTGGGTTGCTGAGCTCACATTGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | ACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGAACTGCTGTGGGTAGTTaGAGAACTTCCCGAAGGAAT | + |
Preference number: 5 (lower is better) Translates to: TVIRTTRFIEICGSQGTRTAVGS*RTSRRN Trigger: ATTCCTTCGGGAAGTTCTCAAACTACCCACAGCAGT...TCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CAA 90 bp | AGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGGACGTAGCCAAAGCCATTTaGACAGCAAATACTGAGATT | + |
Preference number: 5 (lower is better) Translates to: RTTRFIEICGSQGTRQEDVAKAI*TANTEI Trigger: AATCTCAGTATTTGCTGTCAAAATGGCTTTGGCTAC...GTCCTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CAA 90 bp | ACAGTGATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGAGTAGTTGTGACACTGTaGACATCGGTATCGAAATCC | + |
Preference number: 5 (lower is better) Translates to: TVIRTTRFIEICGSQGTRVVVTL*TSVSKS Trigger: GGATTTCGATACCGATGTCAACAGTGTCACAACTAC...TCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTATCACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS-3UTR CAA 90 bp | ATGAACCTTCCCTGCCTTATTATAGATCATCCGATAATCCATCTTCATAGTCTCTGCAATCAGCTGCCTTaGCTGTTTATTTGCATCGAT | + |
Preference number: 5 (lower is better) Translates to: MNLPCLIIDHPIIHLHSLCNQLP*LFICID Trigger: ATCGATGCAAATAAACAGCAAAGGCAGCTGATTGCA...GAGACTATGAAGATGGATTATCGGATGATCTATAATAAGGCAGGGAAGGTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | GCAGACATCAGTGCTAAATTATATCGCAACAGTTTGGCTCATGCATATAAGAAAGTAGCCAAAGCCATTTaGACAGCAAATACTGAGATT | + |
Preference number: 5 (lower is better) Translates to: ADISAKLYRNSLAHAYKKVAKAI*TANTEI Trigger: AATCTCAGTATTTGCTGTCAAAATGGCTTTGGCTAC...TTTCTTATATGCATGAGCCAAACTGTTGCGATATAATTTAGCACTGATGTCTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS-3UTR CAA 90 bp | ATAAGAACCACAAGATTTATAGAAATCTGTGGTTCACAGGGAACAAGACAAGAGAACTTCCCGAAGGAATaGGTCATATCTTCCATATAC | + |
Preference number: 5 (lower is better) Translates to: IRTTRFIEICGSQGTRQENFPKE*VISSIY Trigger: GTATATGGAAGATATGACCAATTCCTTCGGGAAGTT...CTCTTGTCTTGTTCCCTGTGAACCACAGATTTCTATAAATCTTGTGGTTCTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047954.15 |
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CDS TCA 72 bp | CTGCGGGGTGTGCGTTGGTGTGGGACAGGCAGATGCTaGACGGATGGGCATGGGGATCGGCCTGCTGATGGT | + |
Preference number: 6 (lower is better) Translates to: LRGVRWCGTGRC*TDGHGDRPADG Trigger: ACCATCAGCAGGCCGATCCCCATGCCCATCCGTTCAGCATCTGCCTGTCCCACACCAACGCACACCCCGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS GCA 72 bp | TCTTGCACATCTCCGCCTACCCCAGTGAGGGAGTCCTaGGGGGTGTGCGTTGGTGTGGGACAGGCAGATGCT | + |
Preference number: 6 (lower is better) Translates to: SCTSPPTPVRES*GVCVGVGQADA Trigger: AGCATCTGCCTGTCCCACACCAACGCACACCCCGCAGGACTCCCTCACTGGGGTAGGCGGAGATGTGCAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS CAA 72 bp | CCCCATCTTCCGGGACCATGTCACCATGCGTGGTACTaGCAGCTCCACCGTGAATGTACCCAGGTTTCCGGG | + |
Preference number: 6 (lower is better) Translates to: PHLPGPCHHAWY*QLHRECTQVSG Trigger: CCCGGAAACCTGGGTACATTCACGGTGGAGCTGCAAGTACCACGCATGGTGACATGGTCCCGGAAGATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS GCA 72 bp | CCCATCTTCCGGGACCATGTCACCATGCGTGGTACTTaGAGCTCCACCGTGAATGTACCCAGGTTTCCGGGA | + |
Preference number: 6 (lower is better) Translates to: PIFRDHVTMRGT*SSTVNVPRFPG Trigger: TCCCGGAAACCTGGGTACATTCACGGTGGAGCTGCAAGTACCACGCATGGTGACATGGTCCCGGAAGATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS CAA 90 bp | CTCCAGCTGCCGCACAGACTCGTTCTCATAATTGCCATCCTCGGGTaGCGTGTAAGGATCCCCATCTTCCGGGACCATGTCACCATGCGT | + |
Preference number: 6 (lower is better) Translates to: LQLPHRLVLIIAILG*RVRIPIFRDHVTMR Trigger: ACGCATGGTGACATGGTCCCGGAAGATGGGGATCCTTACACGCAACCCGAGGATGGCAATTATGAGAACGAGTCTGTGCGGCAGCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS GCA 72 bp | AACACACGCCATTTTGTCTCGGCTACAGGACAGGGGTaGTTGAGTCTGGTCTCAGTGCTGACGTGGAGCTGG | + |
Preference number: 6 (lower is better) Translates to: NTRHFVSATGQG*LSLVSVLTWSW Trigger: CCAGCTCCACGTCAGCACTGAGACCAGACTCAAGCACCCCTGTCCTGTAGCCGAGACAAAATGGCGTGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222726.2 |
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CDS CCA 72 bp | ATGAGGAGGATTCTGCTGCCAGTCGTGCGGCGTACCTaGCGATCAGCCTGTGTTCTTCATCAAGCCGGTTTG | + |
Preference number: 6 (lower is better) Translates to: MRRILLPVVRRT*RSACVLHQAGL Trigger: CAAACCGGCTTGATGAAGAACACAGGCTGATCGCCAGGTACGCCGCACGACTGGCAGCAGAATCCTCCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS TCA 72 bp | GGTCAAAGGCTGCGAGCAGGAAGTTCAGCAGGAGACTaGTGGACTGCTCCACGTGGATTTGGTGAGTGGTTG | + |
Preference number: 6 (lower is better) Translates to: GQRLRAGSSAGD*WTAPRGFGEWL Trigger: CAACCACTCACCAAATCCACGTGGAGCAGTCCATCAGTCTCCTGCTGAACTTCCTGCTCGCAGCCTTTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS TCA 72 bp | TGGTTACAGGTCTCGGAGGCACGATGTGAGCCAAGTTaGGTGGCTTTTCAGGCTGGTCTGGGAACATGGGGT | + |
Preference number: 6 (lower is better) Translates to: WLQVSEARCEPS*VAFQAGLGTWG Trigger: ACCCCATGTTCCCAGACCAGCCTGAAAAGCCACTCAACTTGGCTCACATCGTGCCTCCGAGACCTGTAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS TCA 72 bp | ACCATGTCACCATGCGTGGTACTTGCAGCTCCACCGTaGATGTACCCAGGTTTCCGGGAGTGGATTTGGGCT | + |
Preference number: 6 (lower is better) Translates to: TMSPCVVLAAPP*MYPGFREWIWA Trigger: AGCCCAAATCCACTCCCGGAAACCTGGGTACATTCACGGTGGAGCTGCAAGTACCACGCATGGTGACATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS GCA 72 bp | TTGAGTGGCTTTTCAGGCTGGTCTGGGAACATGGGGTaGAAAGGTTCACGGCTTGAAGCACAGCTCAGGGAC | + |
Preference number: 6 (lower is better) Translates to: LSGFSGWSGNMG*KGSRLEAQLRD Trigger: GTCCCTGAGCTGTGCTTCAAGCCGTGAACCTTTGCACCCCATGTTCCCAGACCAGCCTGAAAAGCCACTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CCA 72 bp | CACCGCCTCCAGGCGGGCCACGTTGAGTTCTATGTTTaGGTCCAGGTTATTCAAAGCGTTTTCGCGCAATGC | + |
Preference number: 6 (lower is better) Translates to: HRLQAGHVEFYV*VQVIQSVFAQC Trigger: GCATTGCGCGAAAACGCTTTGAATAACCTGGACCCAAACATAGAACTCAACGTGGCCCGCCTGGAGGCGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CCA 72 bp | TACAGGTCTCGGAGGCACGATGTGAGCCAAGTTGAGTaGCTTTTCAGGCTGGTCTGGGAACATGGGGTGCAA | + |
Preference number: 6 (lower is better) Translates to: YRSRRHDVSQVE*LFRLVWEHGVQ Trigger: TTGCACCCCATGTTCCCAGACCAGCCTGAAAAGCCACTCAACTTGGCTCACATCGTGCCTCCGAGACCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CCA 72 bp | AAGGATCCCCATCTTCCGGGACCATGTCACCATGCGTaGTACTTGCAGCTCCACCGTGAATGTACCCAGGTT | + |
Preference number: 6 (lower is better) Translates to: KDPHLPGPCHHA*YLQLHRECTQV Trigger: AACCTGGGTACATTCACGGTGGAGCTGCAAGTACCACGCATGGTGACATGGTCCCGGAAGATGGGGATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS CAA 90 bp | TGTAAGGATCCCCATCTTCCGGGACCATGTCACCATGCGTGGTACTaGCAGCTCCACCGTGAATGTACCCAGGTTTCCGGGAGTGGATTT | + |
Preference number: 6 (lower is better) Translates to: CKDPHLPGPCHHAWY*QLHRECTQVSGSGF Trigger: AAATCCACTCCCGGAAACCTGGGTACATTCACGGTGGAGCTGCAAGTACCACGCATGGTGACATGGTCCCGGAAGATGGGGATCCTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS GCA 72 bp | AGGAGGGAACAGAGTGGGAAAAGAGTGTGTCGTTCATaGTGGTTACAGGTCTCGGAGGCACGATGTGAGCCA | + |
Preference number: 6 (lower is better) Translates to: RREQSGKRVCRS*WLQVSEARCEP Trigger: TGGCTCACATCGTGCCTCCGAGACCTGTAACCAGCATGAACGACACACTCTTTTCCCACTCTGTTCCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS GCA 72 bp | CTTAGATTCCTTCTCGAACTTTGTGCAAACGCCTCTTaGACATCTCCGCCTACCCCAGTGAGGGAGTCCTGC | + |
Preference number: 6 (lower is better) Translates to: LRFLLELCANAS*TSPPTPVRESC Trigger: GCAGGACTCCCTCACTGGGGTAGGCGGAGATGTGCAAGAGGCGTTTGCACAAAGTTCGAGAAGGAATCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS CAA 72 bp | GCTGGTCTGGGAACATGGGGTGCAAAGGTTCACGGCTaGAAGCACAGCTCAGGGACTTGCTTAATGCATTCG | + |
Preference number: 6 (lower is better) Translates to: AGLGTWGAKVHG*KHSSGTCLMHS Trigger: CGAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCAAGCCGTGAACCTTTGCACCCCATGTTCCCAGACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CAA 72 bp | CCCTTCAGAAAGGCGGGAGCAGCCCTAGCCAGCATTTaGTTCTGTTCTACTTCACTGTCCTTGGGAGGAGAG | + |
Preference number: 6 (lower is better) Translates to: PFRKAGAALASI*FCSTSLSLGGE Trigger: CTCTCCTCCCAAGGACAGTGAAGTAGAACAGAACAAAATGCTGGCTAGGGCTGCTCCCGCCTTTCTGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS TCA 72 bp | CCTGGCGATCAGCCTGTGTTCTTCATCAAGCCGGTTTaGACTCTCAAGCATACATGGTGGGTTGTTCCGGAG | + |
Preference number: 6 (lower is better) Translates to: PGDQPVFFIKPV*TLKHTWWVVPE Trigger: CTCCGGAACAACCCACCATGTATGCTTGAGAGTTCAAACCGGCTTGATGAAGAACACAGGCTGATCGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS GCA 72 bp | CATTCTCCAGCTGCCGCACAGACTCGTTCTCATAATTaGCATCCTCGGGTTGCGTGTAAGGATCCCCATCTT | + |
Preference number: 6 (lower is better) Translates to: HSPAAAQTRSHN*HPRVACKDPHL Trigger: AAGATGGGGATCCTTACACGCAACCCGAGGATGGCAATTATGAGAACGAGTCTGTGCGGCAGCTGGAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS CCA 72 bp | AGGGAACAGAGTGGGAAAAGAGTGTGTCGTTCATGCTaGTTACAGGTCTCGGAGGCACGATGTGAGCCAAGT | + |
Preference number: 6 (lower is better) Translates to: REQSGKRVCRSC*LQVSEARCEPS Trigger: ACTTGGCTCACATCGTGCCTCCGAGACCTGTAACCAGCATGAACGACACACTCTTTTCCCACTCTGTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CAA 72 bp | AAAATAGTGGAGAGCACCGCCTCCAGGCGGGCCACGTaGAGTTCTATGTTTGGGTCCAGGTTATTCAAAGCG | + |
Preference number: 6 (lower is better) Translates to: KIVESTASRRAT*SSMFGSRLFKA Trigger: CGCTTTGAATAACCTGGACCCAAACATAGAACTCAACGTGGCCCGCCTGGAGGCGGTGCTCTCCACTATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CAA 72 bp | GTTCAGCAGGAGACTGATGGACTGCTCCACGTGGATTaGGTGAGTGGTTGGCATCCTCTTGTTGAGCTGGTA | + |
Preference number: 6 (lower is better) Translates to: VQQETDGLLHVD*VSGWHPLVELV Trigger: TACCAGCTCAACAAGAGGATGCCAACCACTCACCAAATCCACGTGGAGCAGTCCATCAGTCTCCTGCTGAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CAA 90 bp | GCCCCTCCAGAAGCAGTCCTGGCAAAGCTGGTAGTTGTGACACTGTaGACATCGGTATCGAAATCCCATCATGCTCTCACTGTGACAGTA | + |
Preference number: 6 (lower is better) Translates to: APPEAVLAKLVVVTL*TSVSKSHHALTVTV Trigger: TACTGTCACAGTGAGAGCATGATGGGATTTCGATACCGATGTCAACAGTGTCACAACTACCAGCTTTGCCAGGACTGCTTCTGGAGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CAA 90 bp | GCTTTTCAGGCTGGTCTGGGAACATGGGGTGCAAAGGTTCACGGCTaGAAGCACAGCTCAGGGACTTGCTTAATGCATTCGTTAGCTTCT | + |
Preference number: 6 (lower is better) Translates to: AFQAGLGTWGAKVHG*KHSSGTCLMHSLAS Trigger: AGAAGCTAACGAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCAAGCCGTGAACCTTTGCACCCCATGTTCCCAGACCAGCCTGAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS TCA 72 bp | CAATCAGCTGCCTTTGCTGTTTATTTGCATCGATGGTaGAGGAGATGTCAGGGGCACTCCTCTGCTGTGTGG | + |
Preference number: 6 (lower is better) Translates to: QSAAFAVYLHRW*RRCQGHSSAVW Trigger: CCACACAGCAGAGGAGTGCCCCTGACATCTCCTTCACCATCGATGCAAATAAACAGCAAAGGCAGCTGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS GCA 72 bp | ACTGGATGGAAGACATTTTCTACATTTGCCAGTCGGTaGAGAAGAGGCAGCCATACCAGGCACTGTGGAGGA | + |
Preference number: 6 (lower is better) Translates to: TGWKTFSTFASR*RRGSHTRHCGG Trigger: TCCTCCACAGTGCCTGGTATGGCTGCCTCTTCTGCACCGACTGGCAAATGTAGAAAATGTCTTCCATCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CAA 72 bp | ACCTGGCGATCAGCCTGTGTTCTTCATCAAGCCGGTTaGAACTCTCAAGCATACATGGTGGGTTGTTCCGGA | + |
Preference number: 6 (lower is better) Translates to: TWRSACVLHQAG*NSQAYMVGCSG Trigger: TCCGGAACAACCCACCATGTATGCTTGAGAGTTCAAACCGGCTTGATGAAGAACACAGGCTGATCGCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS TCA 72 bp | CCTGGCGATCAGCCTGTGTTCTTCATCAAGCCGGTTTaGACTCTCAAGCATACTCCTGGTGATGAAAGGACT | + |
Preference number: 6 (lower is better) Translates to: PGDQPVFFIKPV*TLKHTPGDERT Trigger: AGTCCTTTCATCACCAGGAGTATGCTTGAGAGTTCAAACCGGCTTGATGAAGAACACAGGCTGATCGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115832.4 |
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CDS TCA 72 bp | TTCTCAGAGGTCGGTGATGGAGCCAGATCCTCAAACTaGGGTCTCGAGAACTCGGAATCCACAGTACTTTCT | + |
Preference number: 6 (lower is better) Translates to: FSEVGDGARSSN*GLENSESTVLS Trigger: AGAAAGTACTGTGGATTCCGAGTTCTCGAGACCTCAGTTTGAGGATCTGGCTCCATCACCGACCTCTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115832.4 ENSMUST00000220904.2 |
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CDS CAA 72 bp | GAAGCAGTCCTGGCAAAGCTGGTAGTTGTGACACTGTaGACATCGGTATCGAAATCCCATCATGCTCTCACT | + |
Preference number: 6 (lower is better) Translates to: EAVLAKLVVVTL*TSVSKSHHALT Trigger: AGTGAGAGCATGATGGGATTTCGATACCGATGTCAACAGTGTCACAACTACCAGCTTTGCCAGGACTGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS GCA 72 bp | CAAATTGCATTTCTTCTGCACAAATCTCAGCTTGCATaGTGTTCTGTAGGTGGAGAGTCGGATGCGATCCAG | + |
Preference number: 6 (lower is better) Translates to: QIAFLLHKSQLA*CSVGGESDAIQ Trigger: CTGGATCGCATCCGACTCTCCACCTACAGAACAGCATGCAAGCTGAGATTTGTGCAGAAGAAATGCAATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS GCA 72 bp | GTTTGGGTCCAGGTTATTCAAAGCGTTTTCGCGCAATaGTTCAATGACGTTCCAAATGTCCACCAGGTGCAA | + |
Preference number: 6 (lower is better) Translates to: VWVQVIQSVFAQ*FNDVPNVHQVQ Trigger: TTGCACCTGGTGGACATTTGGAACGTCATTGAAGCATTGCGCGAAAACGCTTTGAATAACCTGGACCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS GCA 72 bp | TGTGACACTGTTGACATCGGTATCGAAATCCCATCATaGTCTCACTGTGACAGTAGGAACACTCAACTGGAT | + |
Preference number: 6 (lower is better) Translates to: CDTVDIGIEIPS*SHCDSRNTQLD Trigger: ATCCAGTTGAGTGTTCCTACTGTCACAGTGAGAGCATGATGGGATTTCGATACCGATGTCAACAGTGTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CCA 72 bp | ACTGCTGTGGGTAGTTTGAGAACTTCCCGAAGGAATTaGTCATATCTTCCATATACCATCACTCCACTGGAG | + |
Preference number: 6 (lower is better) Translates to: TAVGSLRTSRRN*SYLPYTITPLE Trigger: CTCCAGTGGAGTGATGGTATATGGAAGATATGACCAATTCCTTCGGGAAGTTCTCAAACTACCCACAGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CCA 72 bp | CATCATGCTCTCACTGTGACAGTAGGAACACTCAACTaGATGGAAGACATTTTCTACATTTGCCAGTCGGTG | + |
Preference number: 6 (lower is better) Translates to: HHALTVTVGTLN*MEDIFYICQSV Trigger: CACCGACTGGCAAATGTAGAAAATGTCTTCCATCCAGTTGAGTGTTCCTACTGTCACAGTGAGAGCATGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS TCA 72 bp | CCAGGTTATTCAAAGCGTTTTCGCGCAATGCTTCAATaGCGTTCCAAATGTCCACCAGGTGCAAATTGCATT | + |
Preference number: 6 (lower is better) Translates to: PGYSKRFRAMLQ*RSKCPPGANCI Trigger: AATGCAATTTGCACCTGGTGGACATTTGGAACGTCATTGAAGCATTGCGCGAAAACGCTTTGAATAACCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CAA 90 bp | AACTTGTCCATGATCTTTCCTCCACACAATGTAGCCAAAGCCATTTaGACAGCAAATACTGAGATTTTTCCATGGCCTTCCGGGTCAAAG | + |
Preference number: 6 (lower is better) Translates to: NLSMIFPPHNVAKAI*TANTEIFPWPSGSK Trigger: CTTTGACCCGGAAGGCCATGGAAAAATCTCAGTATTTGCTGTCAAAATGGCTTTGGCTACATTGTGTGGAGGAAAGATCATGGACAAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CAA 72 bp | CCAAATGAAGGACCTTCAAAAACTGCTGTGGGTAGTTaGAGAACTTCCCGAAGGAATTGGTCATATCTTCCA | + |
Preference number: 6 (lower is better) Translates to: PNEGPSKTAVGS*RTSRRNWSYLP Trigger: TGGAAGATATGACCAATTCCTTCGGGAAGTTCTCAAACTACCCACAGCAGTTTTTGAAGGTCCTTCATTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS TCA 72 bp | CAAATGAAGGACCTTCAAAAACTGCTGTGGGTAGTTTaGGAACTTCCCGAAGGAATTGGTCATATCTTCCAT | + |
Preference number: 6 (lower is better) Translates to: QMKDLQKLLWVV*ELPEGIGHIFH Trigger: ATGGAAGATATGACCAATTCCTTCGGGAAGTTCTCAAACTACCCACAGCAGTTTTTGAAGGTCCTTCATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |
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CDS CAA 72 bp | ATGATCTTTCCTCCACACAATGTAGCCAAAGCCATTTaGACAGCAAATACTGAGATTTTTCCATGGCCTTCC | + |
Preference number: 6 (lower is better) Translates to: MIFPPHNVAKAI*TANTEIFPWPS Trigger: GGAAGGCCATGGAAAAATCTCAGTATTTGCTGTCAAAATGGCTTTGGCTACATTGTGTGGAGGAAAGATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047954.15 ENSMUST00000115832.4 ENSMUST00000220904.2 ENSMUST00000221880.2 |