RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DST (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026131

Ensembl transcript IDs: ENSMUST00000097785.10, ENSMUST00000097786.10, ENSMUST00000115104.10, ENSMUST00000182018.8, ENSMUST00000182314.8, ENSMUST00000182507.4, ENSMUST00000182697.8, ENSMUST00000183006.5, ENSMUST00000183034.5, ENSMUST00000183100.8, ENSMUST00000183302.6, ENSMUST00000185269.7, ENSMUST00000185897.7, ENSMUST00000187486.7, ENSMUST00000194192.3, ENSMUST00000239001.2

Found 3452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCATCTCCAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTTaGATCCCAGTCCTGTGGTGCTCTGTGAGGTGCTCTTTCAGGATG +
Preference number: 1 (lower is better)
Translates to: AISSLTGRGHFCTFL*IPVLWCSVRCSFRM
Trigger: CATCCTGAAAGAGCACCTCACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTGGAGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR GCA 90 bp GCACAAGGACACTGGGAGGTGTGTGAACGCCATGGTACCGGCGGCTaGTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCTG +
Preference number: 1 (lower is better)
Translates to: AQGHWEVCERHGTGG*LRRFPVTLILSWRL
Trigger: CAGCCTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCATGGCGTTCACACACCTCCCAGTGTCCTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR TCA 90 bp GTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATCTGCTCTaGACAGATGGCAGGATGCAGCCGACACGGCCTCTGCACAGAGTC +
Preference number: 1 (lower is better)
Translates to: VTQFLGCTFSRHHLL*TDGRMQPTRPLHRV
Trigger: GACTCTGTGCAGAGGCCGTGTCGGCTGCATCCTGCCATCTGTTCAGAGCAGATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR TCA 90 bp ATCACAGAGTGGTTTCAAATGTATGAGCCTCCTGCCTCAGCTTCCTaGGTGCTGACATTCCAAGTATGTGCCACCAGGGTCAATACAGAT +
Preference number: 1 (lower is better)
Translates to: ITEWFQMYEPPASAS*VLTFQVCATRVNTD
Trigger: ATCTGTATTGACCCTGGTGGCACATACTTGGAATGTCAGCACTCAGGAAGCTGAGGCAGGAGGCTCATACATTTGAAACCACTCTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR GCA 90 bp ACAGTTCTATGCCACCTAAAAAGATTCAGAGAAAGAGCTCCATGGTaGCCCAGTCTTGTCTCCCTGGGACAGGTGGATAACAGTGGAAAT +
Preference number: 1 (lower is better)
Translates to: TVLCHLKRFRERAPW*PSLVSLGQVDNSGN
Trigger: ATTTCCACTGTTATCCACCTGTCCCAGGGAGACAAGACTGGGGCACCATGGAGCTCTTTCTCTGAATCTTTTTAGGTGGCATAGAACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR CCA 90 bp TCCACCCTCCCTCCCACCTATTTATTTAGAGACAAGGTTTTGCTCTaGATCACAGAGTGGTTTCAAATGTATGAGCCTCCTGCCTCAGCT +
Preference number: 1 (lower is better)
Translates to: STLPPTYLFRDKVLL*ITEWFQMYEPPASA
Trigger: AGCTGAGGCAGGAGGCTCATACATTTGAAACCACTCTGTGATCCAGAGCAAAACCTTGTCTCTAAATAAATAGGTGGGAGGGAGGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR CCA 90 bp TTGAGGACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTaGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCAA +
Preference number: 1 (lower is better)
Translates to: LRTGKAFMISLGSLL*PPSCFRSMTNKQTQ
Trigger: TTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGTCCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR TCA 90 bp TCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATaGCAAATAAGCAAACCCAACTTTATTCATGAGAGAGATTTGGGA +
Preference number: 1 (lower is better)
Translates to: SVWDHCSGHPAASGV*QISKPNFIHERDLG
Trigger: TCCCAAATCTCTCTCATGAATAAAGTTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR GCA 90 bp ACTCATCCACCCTCCCTCCCACCTATTTATTTAGAGACAAGGTTTTaGTCTGGATCACAGAGTGGTTTCAAATGTATGAGCCTCCTGCCT +
Preference number: 1 (lower is better)
Translates to: THPPSLPPIYLETRF*SGSQSGFKCMSLLP
Trigger: AGGCAGGAGGCTCATACATTTGAAACCACTCTGTGATCCAGAGCAAAACCTTGTCTCTAAATAAATAGGTGGGAGGGAGGGTGGATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR TCA 90 bp AGTGGTTTCAAATGTATGAGCCTCCTGCCTCAGCTTCCTGAGTGCTaGCATTCCAAGTATGTGCCACCAGGGTCAATACAGATATTTCTT +
Preference number: 1 (lower is better)
Translates to: SGFKCMSLLPQLPEC*HSKYVPPGSIQIFL
Trigger: AAGAAATATCTGTATTGACCCTGGTGGCACATACTTGGAATGTCAGCACTCAGGAAGCTGAGGCAGGAGGCTCATACATTTGAAACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR TCA 90 bp TGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTaGCTTTTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAG +
Preference number: 1 (lower is better)
Translates to: CGCQRECGLTCRYSN*LLVYGLHSTVQKHQ
Trigger: CTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAAAAGTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR TCA 90 bp TATGCAAGAAACCAACTATGGGACACGGGATCCTACAACAGACCTTaGGCAACAGAGACCTTGCATGCATTTAGAGCTGCTATTTTCAAT +
Preference number: 1 (lower is better)
Translates to: YARNQLWDTGSYNRP*ATETLHAFRAAIFN
Trigger: ATTGAAAATAGCAGCTCTAAATGCATGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGTCCCATAGTTGGTTTCTTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR TCA 90 bp AGCTGCTTCAGGAGTATGACAAATAAGCAAACCCAACTTTATTCATaGGAGAGATTTGGGAATCGCTGCCTTTACATTAGCATTACAATC +
Preference number: 1 (lower is better)
Translates to: SCFRSMTNKQTQLYS*ERFGNRCLYISITI
Trigger: GATTGTAATGCTAATGTAAAGGCAGCGATTCCCAAATCTCTCTCATGAATAAAGTTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR GCA 90 bp GCCCTCAGCACCGAGATACTCAGTGAGCAAGGCAGGCGAGTGGACCCAGGCTTTACCACTCTGCTGCTCTaGCCGTCTCTGTCTGTCTCT +
Preference number: 2 (lower is better)
Translates to: ALSTEILSEQGRRVDPGFTTLLL*PSLSVS
Trigger: AGAGACAGACAGAGACGGGCAGAGCAGCAGAGTGGT...AAAGCCTGGGTCCACTCGCCTGCCTTGCTCACTGAGTATCTCGGTGCTGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR CAA 90 bp CAAGGACACTGGGAGGTGTGTGAACGCCATGGTACCGGCGGCTGCTaGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: QGHWEVCERHGTGGC*RRFPVTLILSWRLL
Trigger: GAGCAGCCTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCATGGCGTTCACACACCTCCCAGTGTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGCTGCTCGAAGAACTaGGTCTTGTTGTGTTTTTCC +
Preference number: 2 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCGCSKN*VLLCFS
Trigger: GGAAAAACACAACAAGACGCAGTTCTTCGAGCAGCC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR-3UTR GCA 90 bp AGATTCAGAGAAAGAGCTCCATGGTGCCCCAGTCTTGTCTCCCTGGGACAGGTGCACCAACCCCAAGTCTaGTGCCCAGTCACCCCTCAG +
Preference number: 2 (lower is better)
Translates to: RFRERAPWCPSLVSLGQVHQPQV*CPVTPQ
Trigger: CTGAGGGGTGACTGGGCAGCAGACTTGGGGTTGGTG...CACCTGTCCCAGGGAGACAAGACTGGGGCACCATGGAGCTCTTTCTCTGAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR TCA 90 bp ACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTAGACACCATCTGCTCTaGACAGATGGCAGGATGCAG +
Preference number: 2 (lower is better)
Translates to: TGRGHFCTFLWIPVLWCSRHHLL*TDGRMQ
Trigger: CTGCATCCTGCCATCTGTTCAGAGCAGATGGTGTCT...AGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR GCA 90 bp CCAACTATGGGACACGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTGCACACCAACCCCAAGTCTaGTGCCCAGTCACCCCTCAG +
Preference number: 2 (lower is better)
Translates to: PTMGHGILQQTLSNRDLAHQPQV*CPVTPQ
Trigger: CTGAGGGGTGACTGGGCAGCAGACTTGGGGTTGGTG...TGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGTCCCATAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGCTATGTAGTGCTGTaGTTGTCAGAGAGAATGTGG +
Preference number: 2 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSYVVL*LSERMW
Trigger: CCACATTCTCTCTGACAACCACAGCACTACATAGCT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATACAATTCCCTGCTTaGTTTGTCAGCTGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVIQFPA*FVSCSE
Trigger: TTCTGAACAGCTGACAAACCAAGCAGGGAATTGTAT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR-3UTR CCA 90 bp TCGCTATGCAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTTTTTGCACGTTCCTTTaGATCCCAGTCCTGTGGTGC +
Preference number: 2 (lower is better)
Translates to: SLCRGHHCLQVAISSLTGFCTFL*IPVLWC
Trigger: GCACCACAGGACTGGGATCCAAAGGAACGTGCAAAA...ACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTGCATAGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTTCCTTATCACATATaGTGTGACTTTTACCCCCAG +
Preference number: 2 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLPYHI*CDFYPQ
Trigger: CTGGGGGTAAAAGTCACATCATATGTGATAAGGAAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR-3UTR GCA 90 bp GGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTTTAGCAGACACCATCTaGTCTGAACAGATGGCAGGA +
Preference number: 2 (lower is better)
Translates to: GSGALLHVPLDPSPVVLCLADTI*SEQMAG
Trigger: TCCTGCCATCTGTTCAGAGCAGATGGTGTCTGCTAA...ACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR GCA 90 bp TCGCTATGCAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTACACAGTTCCTAGGCTaGACATTTAGCAGACACCAT +
Preference number: 2 (lower is better)
Translates to: SLCRGHHCLQVAISSLTGTQFLG*TFSRHH
Trigger: ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGT...ACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTGCATAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR GCA 90 bp GGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTTCTGCAGAGGACATCACTaGCTGCAGGTAGCCATCTCC +
Preference number: 2 (lower is better)
Translates to: GKAFMISLGSLLWPPSCFCRGHH*LQVAIS
Trigger: GGAGATGGCTACCTGCAGGCAGTGATGTCCTCTGCA...GAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR CCA 90 bp GGATCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCTCTGCTCTGAACAGATaGCAGGATGCAGCCGACACG +
Preference number: 2 (lower is better)
Translates to: GSLLWPPSCFRSMTNKQTSALNR*QDAADT
Trigger: CGTGTCGGCTGCATCCTGCCATCTGTTCAGAGCAGA...GGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR GCA 90 bp ACCTACAATTCCGATTCCTGGGCTGGAGAGAGATGGCTCAATGGCTATGAGCAGATAACACCACTCTGCTaGTCTGCCCGTCTCTGTCTG +
Preference number: 2 (lower is better)
Translates to: TYNSDSWAGERWLNGYEQITPLC*SARLCL
Trigger: CAGACAGAGACGGGCAGAGCAGCAGAGTGGTGTTAT...CTGCTCATAGCCATTGAGCCATCTCTCTCCAGCCCAGGAATCGGAATTGTAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR CCA 90 bp ACCTACAATTCCGATTCCTGGGCTGGAGAGAGATGGCTCAATGGCTATGAGCAGTCTCCCTGGGACAGGTaGATAACAGTGGAAATGCCC +
Preference number: 2 (lower is better)
Translates to: TYNSDSWAGERWLNGYEQSPWDR*ITVEMP
Trigger: GGGCATTTCCACTGTTATCCACCTGTCCCAGGGAGA...CTGCTCATAGCCATTGAGCCATCTCTCTCCAGCCCAGGAATCGGAATTGTAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR CCA 90 bp CCAACTATGGGACACGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTGCATGGGCTGGAGAGAGATaGCTCAATGGCTATGAGCAG +
Preference number: 2 (lower is better)
Translates to: PTMGHGILQQTLSNRDLAWAGER*LNGYEQ
Trigger: CTGCTCATAGCCATTGAGCCATCTCTCTCCAGCCCA...TGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGTCCCATAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR GCA 90 bp ACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTCAGCCAATCGTTTTCTaGTTTCAACTTAAGAATGGC +
Preference number: 2 (lower is better)
Translates to: TGRGHFCTFLWIPVLWCSQPIVF*FQLKNG
Trigger: GCCATTCTTAAGTTGAAAGCAGAAAACGATTGGCTG...AGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGCTATGTAGTGCTGTaGTTGTCAGAGAGAATGTGG +
Preference number: 2 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESYVVL*LSERMW
Trigger: CCACATTCTCTCTGACAACCACAGCACTACATAGCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR-3UTR CCA 90 bp CCAACTATGGGACACGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTGCATACAATTCCGATTCCTaGGCTGGAGAGAGATGGCTC +
Preference number: 2 (lower is better)
Translates to: PTMGHGILQQTLSNRDLAYNSDS*AGERWL
Trigger: GAGCCATCTCTCTCCAGCCCAGGAATCGGAATTGTA...TGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGTCCCATAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTTCCTTATCACATATaGTGTGACTTTTACCCCCAG +
Preference number: 2 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELPYHI*CDFYPQ
Trigger: CTGGGGGTAAAAGTCACATCATATGTGATAAGGAAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR-3UTR TCA 90 bp TCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCAAGAAACTCCACACAGATaGCACCCCTCCTCCAATACA +
Preference number: 2 (lower is better)
Translates to: SLLWPPSCFRSMTNKQTQETPHR*HPSSNT
Trigger: TGTATTGGAGGAGGGGTGTCATCTGTGTGGAGTTTC...TTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR CCA 90 bp ACACGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTGCATGCATTTAGAGTTCCGATTCCTGGGCTaGAGAGAGATGGCTCAATGG +
Preference number: 2 (lower is better)
Translates to: TRDPTTDLEQQRPCMHLEFRFLG*REMAQW
Trigger: CCATTGAGCCATCTCTCTCCAGCCCAGGAATCGGAA...CTCTAAATGCATGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR GCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTCTCTGGCCACCCAGCTaGTTCAGGAGTATGACAAAT +
Preference number: 2 (lower is better)
Translates to: LNHIHCITQQMSLRTGKALWPPS*FRSMTN
Trigger: ATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAG...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR CCA 90 bp ACACGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTGCATGCATTTAGAGTACAATTCCGATTCCTaGGCTGGAGAGAGATGGCTC +
Preference number: 2 (lower is better)
Translates to: TRDPTTDLEQQRPCMHLEYNSDS*AGERWL
Trigger: GAGCCATCTCTCTCCAGCCCAGGAATCGGAATTGTA...CTCTAAATGCATGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR CAA 90 bp CACTCATCCACCCTCCCTCCCACCTATTTATTTAGAGACAAGGTTTaGCTCTGGATCACAGAGTGGTTTCAAATGTATGAGCCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: HSSTLPPTYLFRDKV*LWITEWFQMYEPPA
Trigger: GGCAGGAGGCTCATACATTTGAAACCACTCTGTGATCCAGAGCAAAACCTTGTCTCTAAATAAATAGGTGGGAGGGAGGGTGGATGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTGTAGGTACAGTAACTaGCTTTTAGTGTATGGTCTA +
Preference number: 2 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLECRYSN*LLVYGL
Trigger: TAGACCATACACTAAAAGTCAGTTACTGTACCTACA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR-3UTR TCA 90 bp GATGGCTCAATGGCTATGAGCAGGCTGATATCTTCCAGAGAACTGATTACTCACGTGGTTTCAAATGTATaGGCCTCCTGCCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: DGSMAMSRLISSRELITHVVSNV*ASCLSF
Trigger: GAAGCTGAGGCAGGAGGCTCATACATTTGAAACCAC...GTGAGTAATCAGTTCTCTGGAAGATATCAGCCTGCTCATAGCCATTGAGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR CCA 90 bp CCAACTATGGGACACGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTGCAGACAAGGTTTTGCTCTaGATCACAGAGTGGTTTCAA +
Preference number: 2 (lower is better)
Translates to: PTMGHGILQQTLSNRDLADKVLL*ITEWFQ
Trigger: TTGAAACCACTCTGTGATCCAGAGCAAAACCTTGTC...TGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGTCCCATAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR GCA 90 bp GATGGCTCAATGGCTATGAGCAGGCTGATATCTTCCAGAGAACTGATTACTCACGAACCTTTGCCTGTCTaGTCATGGGTAACCTGTAGA +
Preference number: 2 (lower is better)
Translates to: DGSMAMSRLISSRELITHEPLPV*SWVTCR
Trigger: TCTACAGGTTACCCATGAGCAGACAGGCAAAGGTTC...GTGAGTAATCAGTTCTCTGGAAGATATCAGCCTGCTCATAGCCATTGAGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR GCA 90 bp ACACGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTGCATGCATTTAGAGGACATTCCAAGTATGTaGCACCAGGGTCAATACAGA +
Preference number: 2 (lower is better)
Translates to: TRDPTTDLEQQRPCMHLEDIPSM*HQGQYR
Trigger: TCTGTATTGACCCTGGTGGCACATACTTGGAATGTC...CTCTAAATGCATGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR CCA 90 bp ACACGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTGCATGCATTTAGAGCTCTGGATCACAGAGTaGTTTCAAATGTATGAGCCT +
Preference number: 2 (lower is better)
Translates to: TRDPTTDLEQQRPCMHLELWITE*FQMYEP
Trigger: AGGCTCATACATTTGAAACCACTCTGTGATCCAGAG...CTCTAAATGCATGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR TCA 90 bp ATTACAATCGCAGATGCCTTGACAGATGCTATTAGACAAAAGGAGAGAGCAAAATCCTGTGGTGCTCTGTaGGGTGCTCTTTCAGGATGT +
Preference number: 2 (lower is better)
Translates to: ITIADALTDAIRQKERAKSCGAL*GALSGC
Trigger: ACATCCTGAAAGAGCACCTCACAGAGCACCACAGGA...TTTTGCTCTCTCCTTTTGTCTAATAGCATCTGTCAAGGCATCTGCGATTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR CCA 90 bp TTTATTTCCAAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTTGGATCCCAGTCCTGTaGTGCTCTGTGAGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: FISKVSTKVKVNSDEHFAWIPVL*CSVRCS
Trigger: AGAGCACCTCACAGAGCACCACAGGACTGGGATCCA...AGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTTGGAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR GCA 90 bp AGTGTTTATAGCAATGCTTGTTATAAACTCACTGTCACTTCATTGTTAACGGCAACCACTCTGCTGCTCTaGCCGTCTCTGTCTGTCTCT +
Preference number: 2 (lower is better)
Translates to: SVYSNACYKLTVTSLLTATTLLL*PSLSVS
Trigger: AGAGACAGACAGAGACGGGCAGAGCAGCAGAGTGGT...TGCCGTTAACAATGAAGTGACAGTGAGTTTATAACAAGCATTGCTATAAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR GCA 90 bp AAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGCAGAGGTGGTGCTCTGTGAGGTaGTCTTTCAGGATGTACAAT +
Preference number: 2 (lower is better)
Translates to: KVSTKVKVNSDEHFAMQRWCSVR*SFRMYN
Trigger: ATTGTACATCCTGAAAGAGCACCTCACAGAGCACCA...CCTCTGCATAGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGCTATGTAGTGCTGTaGTTGTCAGAGAGAATGTGG +
Preference number: 2 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSYVVL*LSERMW
Trigger: CCACATTCTCTCTGACAACCACAGCACTACATAGCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTTCCTTATCACATATaGTGTGACTTTTACCCCCAG +
Preference number: 2 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLPYHI*CDFYPQ
Trigger: CTGGGGGTAAAAGTCACATCATATGTGATAAGGAAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR-3UTR TCA 90 bp AGTGTTTATAGCAATGCTTGTTATAAACTCACTGTCACTTCATTGTTAACGGCACAGATTATAGGCATCTaGGCTTACTTTCTGCTAAGG +
Preference number: 2 (lower is better)
Translates to: SVYSNACYKLTVTSLLTAQIIGI*AYFLLR
Trigger: CCTTAGCAGAAAGTAAGCTCAGATGCCTATAATCTG...TGCCGTTAACAATGAAGTGACAGTGAGTTTATAACAAGCATTGCTATAAACACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR CCA 72 bp CCCTATGGTAGAGACGGCGGATGCCCAGGGCGCGTCTaGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGG +
Preference number: 3 (lower is better)
Translates to: PYGRDGGCPGRV*LRLKQRHKDTG
Trigger: CCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCTGGGCATCCGCCGTCTCTACCATAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR CCA 72 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTaGGAGGTGTGTGAACGCCATGGTACCGGCGGCTGC +
Preference number: 3 (lower is better)
Translates to: RLAAPEAEAQGH*EVCERHGTGGC
Trigger: GCAGCCGCCGGTACCATGGCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR GCA 72 bp ACAGCGACGAACACTTCGCTATGCAGAGGACATCACTaGCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGG +
Preference number: 3 (lower is better)
Translates to: TATNTSLCRGHH*LQVAISSLTGR
Trigger: CCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTGCATAGCGAAGTGTTCGTCGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGACTCTGATTCTCTCTaGGAGGCTGCTCGAAGAACT +
Preference number: 3 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCDSDSL*EAARRT
Trigger: AGTTCTTCGAGCAGCCTCCAAGAGAGAATCAGAGTC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAATTCCCTGCTTGGTTaGTCAGCTGTTCAGAATCTC +
Preference number: 3 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVNSLLG*SAVQNL
Trigger: GAGATTCTGAACAGCTGACAAACCAAGCAGGGAATT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGACTCTGATTCTCTCTaGGAGGCTGCTCGAAGAACT +
Preference number: 3 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNDSDSL*EAARRT
Trigger: AGTTCTTCGAGCAGCCTCCAAGAGAGAATCAGAGTC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAATTCCCTGCTTGGTTaGTCAGCTGTTCAGAATCTC +
Preference number: 3 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCNSLLG*SAVQNL
Trigger: GAGATTCTGAACAGCTGACAAACCAAGCAGGGAATT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR GCA 72 bp TTAGCAGACACCATCTGCTCTGAACAGATGGCAGGATaGAGCCGACACGGCCTCTGCACAGAGTCAAACGCC +
Preference number: 3 (lower is better)
Translates to: LADTICSEQMAG*SRHGLCTESNA
Trigger: GGCGTTTGACTCTGTGCAGAGGCCGTGTCGGCTGCATCCTGCCATCTGTTCAGAGCAGATGGTGTCTGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR CCA 72 bp CCAACCCCAAGTCTGCTGCCCAGTCACCCCTCAGCATaGCAAAGTGGTATGACCTGGAGTTTCACGCCTTGT +
Preference number: 3 (lower is better)
Translates to: PTPSLLPSHPSA*QSGMTWSFTPC
Trigger: ACAAGGCGTGAAACTCCAGGTCATACCACTTTGCCATGCTGAGGGGTGACTGGGCAGCAGACTTGGGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAATTCCCTGCTTGGTTaGTCAGCTGTTCAGAATCTC +
Preference number: 3 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERNSLLG*SAVQNL
Trigger: GAGATTCTGAACAGCTGACAAACCAAGCAGGGAATT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR TCA 72 bp TTCCTAGGCTGCACATTTAGCAGACACCATCTGCTCTaGACAGATGGCAGGATGCAGCCGACACGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: FLGCTFSRHHLL*TDGRMQPTRPL
Trigger: CAGAGGCCGTGTCGGCTGCATCCTGCCATCTGTTCAGAGCAGATGGTGTCTGCTAAATGTGCAGCCTAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCGAAGAACTGCGTCTaGTTGTGTTTTTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSKNCV*LCFSFC
Trigger: ACAAAAGGAAAAACACAACAAGACGCAGTTCTTCGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR GCA 72 bp TTCCAGTTTGACAGTAAAAGCACACACTCGAGAGCCTaGCTGCCACGTCTGAATCCCAAGGGTGCCACTCAC +
Preference number: 3 (lower is better)
Translates to: FQFDSKSTHSRA*LPRLNPKGATH
Trigger: GTGAGTGGCACCCTTGGGATTCAGACGTGGCAGGCAGGCTCTCGAGTGTGTGCTTTTACTGTCAAACTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCGAAGAACTGCGTCTaGTTGTGTTTTTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSKNCV*LCFSFC
Trigger: ACAAAAGGAAAAACACAACAAGACGCAGTTCTTCGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR CCA 72 bp AAGTCTGCTGCCCAGTCACCCCTCAGCATGGCAAAGTaGTATGACCTGGAGTTTCACGCCTTGTTAAGCTTG +
Preference number: 3 (lower is better)
Translates to: KSAAQSPLSMAK*YDLEFHALLSL
Trigger: CAAGCTTAACAAGGCGTGAAACTCCAGGTCATACCACTTTGCCATGCTGAGGGGTGACTGGGCAGCAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR CAA 90 bp GCCCTCAGCACCGAGATACTCAGTGAGCAAGGCAGGCGAGTGGACCCAGGCTTTGGTTTAATTTCCAGTTaGACAGTAAAAGCACACACT +
Preference number: 3 (lower is better)
Translates to: ALSTEILSEQGRRVDPGFGLISS*TVKAHT
Trigger: AGTGTGTGCTTTTACTGTCAAACTGGAAATTAAACC...AAAGCCTGGGTCCACTCGCCTGCCTTGCTCACTGAGTATCTCGGTGCTGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR TCA 72 bp GCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTaGGGTGCTCTTTCAGGATGTACAATGGATGACATC +
Preference number: 3 (lower is better)
Translates to: ARSFGSQSCGAL*GALSGCTMDDI
Trigger: GATGTCATCCATTGTACATCCTGAAAGAGCACCTCACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR GCA 72 bp TGCCACCTAAAAAGATTCAGAGAAAGAGCTCCATGGTaGCCCAGTCTTGTCTCCCTGGGACAGGTGGATAAC +
Preference number: 3 (lower is better)
Translates to: CHLKRFRERAPW*PSLVSLGQVDN
Trigger: GTTATCCACCTGTCCCAGGGAGACAAGACTGGGGCACCATGGAGCTCTTTCTCTGAATCTTTTTAGGTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR CCA 72 bp CTATGCCACCTAAAAAGATTCAGAGAAAGAGCTCCATaGTGCCCCAGTCTTGTCTCCCTGGGACAGGTGGAT +
Preference number: 3 (lower is better)
Translates to: LCHLKRFRERAP*CPSLVSLGQVD
Trigger: ATCCACCTGTCCCAGGGAGACAAGACTGGGGCACCATGGAGCTCTTTCTCTGAATCTTTTTAGGTGGCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR CCA 72 bp GGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTaGTGCTCTGTGAGGTGCTCTTTCAGGATGTACAAT +
Preference number: 3 (lower is better)
Translates to: GHFCTFLWIPVL*CSVRCSFRMYN
Trigger: ATTGTACATCCTGAAAGAGCACCTCACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR GCA 72 bp CACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTaGTCTGTGAGGTGCTCTTTCAGGATGTACAATGGA +
Preference number: 3 (lower is better)
Translates to: HFCTFLWIPVLW*SVRCSFRMYNG
Trigger: TCCATTGTACATCCTGAAAGAGCACCTCACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR-3UTR CAA 90 bp ACCTACAATTCCGATTCCTGGGCTGGAGAGAGATGGCTCAATGGCTATGAGCAGCTCACTGTCACTTCATaGTTAACGGCAAGACTTCGT +
Preference number: 3 (lower is better)
Translates to: TYNSDSWAGERWLNGYEQLTVTS*LTARLR
Trigger: ACGAAGTCTTGCCGTTAACAATGAAGTGACAGTGAG...CTGCTCATAGCCATTGAGCCATCTCTCTCCAGCCCAGGAATCGGAATTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR CAA 90 bp AGGTGGATAACAGTGGAAATGCCCTCAGCACCGAGATACTCAGTGAGCAAGGCACTCACTGTCACTTCATaGTTAACGGCAAGACTTCGT +
Preference number: 3 (lower is better)
Translates to: RWITVEMPSAPRYSVSKALTVTS*LTARLR
Trigger: ACGAAGTCTTGCCGTTAACAATGAAGTGACAGTGAG...TGCCTTGCTCACTGAGTATCTCGGTGCTGAGGGCATTTCCACTGTTATCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR TCA 72 bp AACCAACTATGGGACACGGGATCCTACAACAGACCTTaGGCAACAGAGACCTTGCATGCATTTAGAGCTGCT +
Preference number: 3 (lower is better)
Translates to: NQLWDTGSYNRP*ATETLHAFRAA
Trigger: AGCAGCTCTAAATGCATGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGTCCCATAGTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR GCA 72 bp ATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTaGTTCAGGAGTATGACAAATAAGCAAACCCAACTT +
Preference number: 3 (lower is better)
Translates to: MISLGSLLWPPS*FRSMTNKQTQL
Trigger: AAGTTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR CCA 72 bp ACGTCTGAATCCCAAGGGTGCCACTCACTAGTCTTGTaGCTAGGCAAATATTACCCAGTGTCTTGGCTTCAT +
Preference number: 3 (lower is better)
Translates to: TSESQGCHSLVL*LGKYYPVSWLH
Trigger: ATGAAGCCAAGACACTGGGTAATATTTGCCTAGCCACAAGACTAGTGAGTGGCACCCTTGGGATTCAGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR CCA 72 bp AAAACCTACAATTCCGATTCCTGGGCTGGAGAGAGATaGCTCAATGGCTATGAGCAGGCTGATATCTTCCAG +
Preference number: 3 (lower is better)
Translates to: KTYNSDSWAGER*LNGYEQADIFQ
Trigger: CTGGAAGATATCAGCCTGCTCATAGCCATTGAGCCATCTCTCTCCAGCCCAGGAATCGGAATTGTAGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR CAA 90 bp AGATTCAGAGAAAGAGCTCCATGGTGCCCCAGTCTTGTCTCCCTGGGACAGGTGGGTTTAATTTCCAGTTaGACAGTAAAAGCACACACT +
Preference number: 3 (lower is better)
Translates to: RFRERAPWCPSLVSLGQVGLISS*TVKAHT
Trigger: AGTGTGTGCTTTTACTGTCAAACTGGAAATTAAACC...CACCTGTCCCAGGGAGACAAGACTGGGGCACCATGGAGCTCTTTCTCTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR CCA 72 bp GGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTaGCCACCCAGCTGCTTCAGGAGTATGACAAATAAG +
Preference number: 3 (lower is better)
Translates to: GKAFMISLGSLL*PPSCFRSMTNK
Trigger: CTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR TCA 72 bp GATCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATaGCAAATAAGCAAACCCAACTTTATTCATGAGAGA +
Preference number: 3 (lower is better)
Translates to: DHCSGHPAASGV*QISKPNFIHER
Trigger: TCTCTCATGAATAAAGTTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR GCA 72 bp CCCTCCCTCCCACCTATTTATTTAGAGACAAGGTTTTaGTCTGGATCACAGAGTGGTTTCAAATGTATGAGC +
Preference number: 3 (lower is better)
Translates to: PSLPPIYLETRF*SGSQSGFKCMS
Trigger: GCTCATACATTTGAAACCACTCTGTGATCCAGAGCAAAACCTTGTCTCTAAATAAATAGGTGGGAGGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR GCA 72 bp CGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTaGATGCATTTAGAGCTGCTATTTTCAATTCTACCA +
Preference number: 3 (lower is better)
Translates to: RDPTTDLEQQRP*MHLELLFSILP
Trigger: TGGTAGAATTGAAAATAGCAGCTCTAAATGCATGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR-3UTR CAA 90 bp GATGGCTCAATGGCTATGAGCAGGCTGATATCTTCCAGAGAACTGATTACTCACATATTACCCAGTGTCTaGGCTTCATATATAACCAGG +
Preference number: 3 (lower is better)
Translates to: DGSMAMSRLISSRELITHILPSV*ASYITR
Trigger: CCTGGTTATATATGAAGCCAAGACACTGGGTAATAT...GTGAGTAATCAGTTCTCTGGAAGATATCAGCCTGCTCATAGCCATTGAGCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR TCA 72 bp ATTACCCAGTGTCTTGGCTTCATATATAACCAGGGGTaGCAAAGATGGTGTGAGAACCAAATTAACCAGTGT +
Preference number: 3 (lower is better)
Translates to: ITQCLGFIYNQG*QRWCENQINQC
Trigger: ACACTGGTTAATTTGGTTCTCACACCATCTTTGTCACCCCTGGTTATATATGAAGCCAAGACACTGGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR TCA 72 bp AGGAGTATGACAAATAAGCAAACCCAACTTTATTCATaGGAGAGATTTGGGAATCGCTGCCTTTACATTAGC +
Preference number: 3 (lower is better)
Translates to: RSMTNKQTQLYS*ERFGNRCLYIS
Trigger: GCTAATGTAAAGGCAGCGATTCCCAAATCTCTCTCATGAATAAAGTTGGGTTTGCTTATTTGTCATACTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTTTGCTTCCGGCTCTaGTCCCTGGGCGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLCFRL*SLGGWE
Trigger: CTCCCAGCCGCCCAGGGAGCAGAGCCGGAAGCAAAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGGCGGCTGCTGGCTCTaGTTCCGGCTTTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVGGCWL*FRLCFR
Trigger: CCGGAAGCAAAGCCGGAAGCAGAGCCAGCAGCCGCC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGGGGCCGAGCACGCTaGCCATCAGCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRGRAR*PSAPSP
Trigger: TGGAGAAGGAGCTGATGGTCAGCGTGCTCGGCCCCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCAGGGCCTGCACGCTaGTGGTCCTCTTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSGPAR*WSSSPA
Trigger: AGCTGGGGAAGAGGACCAGCAGCGTGCAGGCCCTGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGAGCGCTTCAGGGCCTaGACGCTGCTGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVERFRA*TLLVLF
Trigger: GAAGAGGACCAGCAGCGTGCAGGCCCTGAAGCGCTC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGCTAACCTCTGCTGGTaGTGCTTCGCCCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVANLCW*CFAQAS
Trigger: GCTGGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCAGGTGTAGGTGTCTaGCGCCACCTGCTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCAGVGV*RHLLAV
Trigger: GACGGCCAGCAGGTGGCGCCAGACACCTACACCTGC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCCTGCTTCCAGGACTaGGCCTCGGGAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERACFQD*ASGASG
Trigger: CCCAGAGGCTCCCGAGGCCCAGTCCTGGAAGCAGGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGCATGGACTGCAGCTaGCCGGCGAGCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVCMDCS*PASCRA
Trigger: TGCTCTGCAGCTCGCCGGCCAGCTGCAGTCCATGCA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTCGAGCCCTTCCCTaGCCCTCCAGGGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSRALP*PSRAPV
Trigger: AACTGGTGCCCTGGAGGGCCAGGGAAGGGCTCGAGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTGCCTCGGCGGCTGCTaGCTCTGCTTCCGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCCLGGC*LCFRLC
Trigger: GCAAAGCCGGAAGCAGAGCCAGCAGCCGCCGAGGCA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGACCACGCTGAGCTCTaGTCGGAGAGCGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCDHAEL*SESGDR
Trigger: TCTGTCCCCGCTCTCCGATCAGAGCTCAGCGTGGTC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCCTCCTGGGCCTCCTTaGTCTTCGGTGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCPPGPP*SSVPAA
Trigger: AGCAGCAGGCACCGAAGATCAAGGAGGCCCAGGAGG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGGTCGTCCGCACCTaGCTCCAGGTTCGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCEVVRT*LQVRQF
Trigger: GAACTGGCGAACCTGGAGGCAGGTGCGGACGACCTC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCGGTCTCCCAGCGGGTaGTTAGCTCCTGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRSPSG*LAPASG
Trigger: TCCAGATGCAGGAGCTAAGCACCCGCTGGGAGACCG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAACCTCTGCTGGTGCTaGTTCGCCCAGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCNLCWC*FAQAST
Trigger: GGTGCTGGCCTGGGCGAAGCAGCACCAGCAGAGGTT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGGAGCCAGACCTGCTaGCACTTGCTCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRSQTC*HLLTSR
Trigger: CCTGCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCCAGGAGCCAGACCTaGTGCCACTTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCARSQT*CHLLTS
Trigger: GCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCTGGC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGGCGGCTGCTGGCTCTaGTTCCGGCTTTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERGGCWL*FRLCFR
Trigger: CCGGAAGCAAAGCCGGAAGCAGAGCCAGCAGCCGCC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGATGGCCGAGAACCTaGTCGGGGCACAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCGWPRT*SGHRSV
Trigger: CACAGACCTGTGCCCCGAGCAGGTTCTCGGCCATCC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TCGCTATGCAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCTCCCTCTGGGGCCGTaGCTGTGCCACCGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SLCRGHHCLQVAISSLTGLPLGP*LCHRSA
Trigger: AGCGCTGCGGTGGCACAGGCACGGCCCCAGAGGGAG...ACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTGCATAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGGCCTCGGGAGCCTCTaGGTTCTCTTCCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVGLGSL*VLFQKL
Trigger: GAGCTTCTGGAAGAGAACCCAGAGGCTCCCGAGGCC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTGCATGGACTGCAGCTaGCCGGCGAGCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCCMDCS*PASCRA
Trigger: TGCTCTGCAGCTCGCCGGCCAGCTGCAGTCCATGCA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGACAGCTCCTTGTGCATaGACTGCAGCTGGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVTAPCA*TAAGRR
Trigger: TCGCCGGCCAGCTGCAGTCCATGCACAAGGAGCTGT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCCTGCTAACCTCTGCTaGTGCTGCTTCGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCPANLC*CCFAQA
Trigger: GGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGCAGG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCCGGCTCTGCTCCCTaGGCGGCTGGGAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSGSAP*AAGSLP
Trigger: AGGAAGACTCCCAGCCGCCCAGGGAGCAGAGCCGGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCCGGCTCTGCTCCCTaGGCGGCTGGGAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSGSAP*AAGSLP
Trigger: AGGAAGACTCCCAGCCGCCCAGGGAGCAGAGCCGGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGCACTTGACCTGGCTTaGCCAGGGAGCTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVALDLA*PGSFPH
Trigger: GTGTGGAAAGCTCCCTGGTCAAGCCAGGTCAAGTGC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGGGGCCGAGCACGCTaGCCATCAGCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRGRAR*PSAPSP
Trigger: TGGAGAAGGAGCTGATGGTCAGCGTGCTCGGCCCCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCCTGGCCAGCCGCTGTaGGCTGTTCATACTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVPGQPL*AVHTEV
Trigger: AACCTCAGTATGAACAGCTCACAGCGGCTGGCCAGG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGGTGCCTCTCTGAGTTaGTCTGGCAGACGGCATCGT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVGASLS*SGRRHR
Trigger: ACGATGCCGTCTGCCAGATCAACTCAGAGAGGCACC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCCTGCATCTGGACCCTaGCCCAGGAGGAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCPASGP*PRRSHL
Trigger: GAGATGACTCCTCCTGGGTCAGGGTCCAGATGCAGG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTCCACTGTCCTCACTaGTGCGGCCCCCGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLHCPH*CGPRCL
Trigger: AAGACAACGGGGGCCGCAGCAGTGAGGACAGTGGAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGCTCCTGCTCCAGCTaGAGGAGAGCCTCTAACCGG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSSCSS*RRASNR
Trigger: CCGGTTAGAGGCTCTCCTGCAGCTGGAGCAGGAGCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTCTCCAGCTCCTCCTaGAGGGAGTGCGTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVFSSSS*RECVSF
Trigger: GAAGCTGACGCACTCCCTGCAGGAGGAGCTGGAGAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGAGGTCGTCCGCACCTaGCTCCAGGTTCGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCEREVVRT*LQVRQF
Trigger: GAACTGGCGAACCTGGAGGCAGGTGCGGACGACCTC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGAGGTCGTCCGCACCTaGCTCCAGGTTCGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNEVVRT*LQVRQF
Trigger: GAACTGGCGAACCTGGAGGCAGGTGCGGACGACCTC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCCATCTCTGCCAGTaGCTGCTTCCAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCVHLCQ*LLPGLG
Trigger: GCCCAGTCCTGGAAGCAGGCACTGGCAGAGATGGAC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCGCTCCAGCTGCAGGTaGCTCTCTGAGTTGATCTGG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRSSCR*LSELIW
Trigger: CCAGATCAACTCAGAGAGGCACCTGCAGCTGGAGCG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGCAGACGCTCCGCAATaGGTTCCAGGCTCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVADAPQ*VPGSQG
Trigger: TCCTTGAGAGCCTGGAACGCATTGCGGAGCGTCTGC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGGTGTGTGTCAGCCATaGGAGGAGCTCGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERGVCQP*EELVQG
Trigger: GCCCTGGACGAGCTCCTCGCATGGCTGACACACACC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTTGCAAGCATCTGCTaGCCCCTCAGCATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLASIC*PLSIRL
Trigger: GAGCCTGATGCTGAGGGGGCAGCAGATGCTTGCAAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAACCTCTGCTGGTGCTaGTTCGCCCAGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNNLCWC*FAQAST
Trigger: GGTGCTGGCCTGGGCGAAGCAGCACCAGCAGAGGTT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTAACCTCTGCTGGTaGTGCTTCGCCCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNANLCW*CFAQAS
Trigger: GCTGGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCTAACCTCTGCTGGTaGTGCTTCGCCCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERANLCW*CFAQAS
Trigger: GCTGGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGGAGCCAGACCTGCTaGCACTTGCTCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCRSQTC*HLLTSR
Trigger: CCTGCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCAGGAGCCAGACCTaGTGCCACTTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNARSQT*CHLLTS
Trigger: GCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCTGGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCCAGGAGCCAGACCTaGTGCCACTTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERARSQT*CHLLTS
Trigger: GCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCTGGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTCTGCTTCCGGCTTTaGTTCCGGCTCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLCFRL*FRLCSL
Trigger: CAGGGAGCAGAGCCGGAAGCAAAGCCGGAAGCAGAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCCAGCTTTGGTGCCTaGGTTCCTATGGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSSFGA*VPMGSE
Trigger: CTCGGAGCCCATAGGAACCCAGGCACCAAAGCTGGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTCGAGCCCTTCCCTaGCCCTCCAGGGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSRALP*PSRAPV
Trigger: AACTGGTGCCCTGGAGGGCCAGGGAAGGGCTCGAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTGGCCCTCTTCCTaGCTTCGTCCAGGGATCGCC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNAWPSS*LRPGIA
Trigger: GGCGATCCCTGGACGAAGCCAGGAAGAGGGCCAAGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCCTGCTAACCTCTGCTaGTGCTGCTTCGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNPANLC*CCFAQA
Trigger: GGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGCAGG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGGATTGGTGTGCCCTTaGGTGTGCTGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERGLVCP*VCWRQQ
Trigger: CTGCTGCCGCCAGCACACCCAAGGGCACACCAATCC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGGCTTGGCTGTGGATaGCCGAGAACCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNRLGCG*PRTCSG
Trigger: CCCCGAGCAGGTTCTCGGCCATCCACAGCCAAGCCT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGGACTGGAGATTACTaGGAACCTGCTGGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCGTGDY*EPAGAR
Trigger: GCGAGCACCAGCAGGTTCTCAGTAATCTCCAGTCCC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGGCATCAGGGATGGTaGGGACAGACAGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRHQGW*GQTGFL
Trigger: GAGAAAGCCTGTCTGTCCTCACCATCCCTGATGCCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGGGAGCGGGTCAGAGTaGTCTGGAGCTTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVGSGSE*SGAFHS
Trigger: GGAATGAAAAGCTCCAGATCACTCTGACCCGCTCCC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGAGTTTAGTGGCACTTaGCCTGGCTTGACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVEFSGT*PGLTRE
Trigger: CTCCCTGGTCAAGCCAGGTCAAGTGCCACTAAACTC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTACCTCGCAGACGCTaGGCAGGCTATTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLPRRR*AGYWLC
Trigger: ACACAGCCAATAGCCTGCTCAGCGTCTGCGAGGTAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCACCAATCTGCTCCTTaGTCTTCTCCACCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCHQSAP*SSPPRR
Trigger: CCGCCGAGGTGGAGAAGATCAAGGAGCAGATTGGTG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCCTGCATCTGGACCCTaGCCCAGGAGGAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNPASGP*PRRSHL
Trigger: GAGATGACTCCTCCTGGGTCAGGGTCCAGATGCAGG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCATCGTTTGCACCAATaGCTTCGCCACCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVHRLHQ*LRHLRG
Trigger: TCCCCGAAGGTGGCGAAGGCATTGGTGCAAACGATG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTTCCGTGGTCAGCATaGGTCCTTTGCTGTACACCG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVPWSA*VLCCTP
Trigger: CGGTGTACAGCAAAGGACGCATGCTGACCACGGAAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTCTCCAGCTCCTCCTaGAGGGAGTGCGTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFSSSS*RECVSF
Trigger: GAAGCTGACGCACTCCCTGCAGGAGGAGCTGGAGAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGGTTCGCCAGTTCTTaGTCGGACTGCTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRFASS*SDCCSQ
Trigger: CTGGCTACAGCAGTCCGAGCAAGAACTGGCGAACCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCATCTCTGCCAGTGCCTaGTTCCAGGACTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERISASA*FQDWAS
Trigger: CGAGGCCCAGTCCTGGAAGCAGGCACTGGCAGAGAT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGTCCATCTCTGCCAGTaGCTGCTTCCAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERVHLCQ*LLPGLG
Trigger: GCCCAGTCCTGGAAGCAGGCACTGGCAGAGATGGAC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGCTTCCTGCTGCTaGTTTACGACCGAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNAASCC*FTTEGS
Trigger: CGACCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGATCGGGGACACCTTaGAAGCATCTGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCRSGTP*KHLLPP
Trigger: AGGGGGCAGCAGATGCTTGCAAGGTGTCCCCGATCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGCCACGTTCAGAGTTTaGTCAGCCTGGGTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVATFRV*SAWVSQ
Trigger: CTGGCTTACCCAGGCTGAGCAAACTCTGAACGTGGC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTCTCTACCAGGCGCTaGACCACCTTTTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLSTRR*TTFSHR
Trigger: TCGGTGGGAAAAGGTGGTGCAGCGCCTGGTAGAGAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCGGTCTCCCAGCGGGTaGTTAGCTCCTGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRSPSG*LAPASG
Trigger: TCCAGATGCAGGAGCTAAGCACCCGCTGGGAGACCG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAATTCCTCTGCCTGTTaGAGGGCTGACTCTAGCCGC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVNSSAC*RADSSR
Trigger: GCGGCTAGAGTCAGCCCTGCAACAGGCAGAGGAATT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGGAGCCAGACCTGCTaGCACTTGCTCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNRSQTC*HLLTSR
Trigger: CCTGCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGGAGCCAGACCTGCTaGCACTTGCTCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRSQTC*HLLTSR
Trigger: CCTGCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGTCGGACGCGTCGCTaGCTCGGCGGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESRTRR*LGGCWL
Trigger: GAGCCAGCAGCCGCCGAGGCAGCGACGCGTCCGACT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CCATCTCCAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGGGCGGTCTGGAGGGATaGAGGGCTTGCTCCCTCATC +
Preference number: 4 (lower is better)
Translates to: PSPASRVGGTFARSFGSQGGLEG*RACSLI
Trigger: GATGAGGGAGCAAGCCCTGCATCCCTCCAGACCGCC...CTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTGGAGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCCGCTGTCTCCACAGTaGCTCTGGGCTGTGATCCTG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNPLSPQ*LWAVIL
Trigger: CAGGATCACAGCCCAGAGGCACTGTGGAGACAGCGG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGAGCTTCTCACCTCCTaGCAGTGCTGCTATGTGCAC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVELLTS*QCCYVH
Trigger: GTGCACATAGCAGCACTGCCAGGAGGTGAGAAGCTC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGGCCTCGGGAGCCTCTaGGTTCTCTTCCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERGLGSL*VLFQKL
Trigger: GAGCTTCTGGAAGAGAACCCAGAGGCTCCCGAGGCC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTTCCAGCTTCTCGGTaGCTCCATCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLPASR*LHPPAP
Trigger: AGGAGCAGGTGGATGGAGCCACCGAGAAGCTGGAAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACACAGCTCCTTGTGCATaGACTGCAGCTGGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNTAPCA*TAAGRR
Trigger: TCGCCGGCCAGCTGCAGTCCATGCACAAGGAGCTGT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGCTGAGACCTCAGAATaGCAGCGTCGATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVAETSE*QRRSPP
Trigger: TGGAGGAGATCGACGCTGCCATTCTGAGGTCTCAGC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGACTCGACGCGGAAGTaGATCTGTTGGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCDSTRK*ICWGKL
Trigger: GAGCTTCCCCCAACAGATCCACTTCCGCGTCGAGTC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTTGCTTCCCTGGATTaGTGTGCCCTTGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLASLD*CALGCA
Trigger: AGCACACCCAAGGGCACACCAATCCAGGGAAGCAAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCGCAGACATGTCCTCTaGCTCTCCAGTGACATGGAT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRRHVL*LSSDMD
Trigger: ATCCATGTCACTGGAGAGTCAGAGGACATGTCTGCG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACACTTGGCAAATCTaGGCCCCATTCAGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVNTWQI*APFSAV
Trigger: GACCGCACTGAATGGGGCTCAGATTTGCCAAGTGTT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGGGACTGGAGATTACTaGGAACCTGCTGGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNGTGDY*EPAGAR
Trigger: GCGAGCACCAGCAGGTTCTCAGTAATCTCCAGTCCC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTGACCACGCTGAGCTCTaGTCGGAGAGCGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: GSGALLHVPLDPSPVVLCDHAEL*SESGDR
Trigger: TCTGTCCCCGCTCTCCGATCAGAGCTCAGCGTGGTC...ACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTTTGTTCTGAGCTCTaGGCTGTGACTGGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVCSEL*AVTGSS
Trigger: CGAAGAGCCAGTCACAGCTCAGAGCTCAGAACAAAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCAGTGGGCCACAATCTaGTGTGTTGTCATTGCGGGA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVQWATI*CVVIAG
Trigger: TCCCGCAATGACAACACATCAGATTGTGGCCCACTG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCCAGCAGGTTACCATTaGCTTCATCCTCTTCGCCAG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVPAGYH*LHPLRQ
Trigger: CTGGCGAAGAGGATGAAGTCAATGGTAACCTGCTGG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCACTTGACCTGGCTTaGCCAGGGAGCTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNALDLA*PGSFPH
Trigger: GTGTGGAAAGCTCCCTGGTCAAGCCAGGTCAAGTGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCACTTGACCTGGCTTaGCCAGGGAGCTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERALDLA*PGSFPH
Trigger: GTGTGGAAAGCTCCCTGGTCAAGCCAGGTCAAGTGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTACCTCGCAGACGCTaGGCAGGCTATTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLPRRR*AGYWLC
Trigger: ACACAGCCAATAGCCTGCTCAGCGTCTGCGAGGTAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTGGGGTCCTAGGGAGTaGTGGACCTCTAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCWGPRE*WTSSCS
Trigger: AGAACAGCTAGAGGTCCATCACTCCCTAGGACCCCA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATCAGAGGTTCCCTTTaGGTCTGCGGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVIRGSL*VCGFYH
Trigger: GTGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGAT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCGGACGGAGGCTTTTaGTTGGCCACAAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERADGGF*LATSSS
Trigger: AGAGGAGCTTGTGGCCAATCAAAAGCCTCCGTCCGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGGTGCCTCTCTGAGTTaGTCTGGCAGACGGCATCGT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERGASLS*SGRRHR
Trigger: ACGATGCCGTCTGCCAGATCAACTCAGAGAGGCACC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCACCAATCTGCTCCTTaGTCTTCTCCACCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERHQSAP*SSPPRR
Trigger: CCGCCGAGGTGGAGAAGATCAAGGAGCAGATTGGTG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGTACGTCTCTTCCTTaGTGGCAAAGGCGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVCTSLP*WQRRCR
Trigger: TCTGCACCGCCTTTGCCATCAAGGAAGAGACGTACA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATACAGCCAATCAATaGGGGCCTGCAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCDTANQ*GPAGHL
Trigger: CAGATGCCCTGCAGGCCCTCATTGATTGGCTGTATC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGTCCAGGGCGTCGTTaGGCTTCCTCCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERCPGRR*ASSSFP
Trigger: TGGAAAGGAGGAGGAAGCTCAACGACGCCCTGGACA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTGTCCAGGGCGTCGTTaGGCTTCCTCCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNCPGRR*ASSSFP
Trigger: TGGAAAGGAGGAGGAAGCTCAACGACGCCCTGGACA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGGGGGCACTCTCACAGGGTCAATaGCGCCCCCACTGGCAATTT +
Preference number: 4 (lower is better)
Translates to: QRTSLPAGSHLQPHGSGALSQGQ*RPHWQF
Trigger: AAATTGCCAGTGGGGGCGTCATTGACCCTGTGAGAG...TGCCCCCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTGATGTGTTGTCATTaGGGGAACCACCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLMCCH*GNHPQG
Trigger: TCCCTGGGGGTGGTTCCCGCAATGACAACACATCAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCATGGTTGTTGTGTaGGGAGCCCCTCTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCVMVVV*GAPLWL
Trigger: TAGCCACAGAGGGGCTCCGCACACAACAACCATGAC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCGCTTGCTTTCTCTCTaGTGCTTTCTAACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRLLSL*CFLTAG
Trigger: GCCCGCAGTTAGAAAGCAGCAGAGAGAAAGCAAGCG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTCCTCCTCAGCGCTTaGTTTCTCTCTGCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLLLSA*FLSAAF
Trigger: GAAAGCAGCAGAGAGAAAGCAAGCGCTGAGGAGGAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTCTCCAGCTCCTCCTaGAGGGAGTGCGTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNFSSSS*RECVSF
Trigger: GAAGCTGACGCACTCCCTGCAGGAGGAGCTGGAGAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCATCCAAAGCGTCCTaGACACTCAGGGAGCGGGTC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSSKAS*TLRERV
Trigger: GACCCGCTCCCTGAGTGTGCAGGACGCTTTGGATGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCATCCAAAGCGTCCTaGACACTCAGGGAGCGGGTC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSSKAS*TLRERV
Trigger: GACCCGCTCCCTGAGTGTGCAGGACGCTTTGGATGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCACAGACTCAGTGTCTaGAGGTGTAGGTGTCTGGCG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCHRLSV*RCRCLA
Trigger: CGCCAGACACCTACACCTGCAGACACTGAGTCTGTG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCGGGTGTCGAACTCTTaGAGCAGAATCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCRVSNS*SRIWTC
Trigger: GCAGGTCCAGATTCTGCTGCAAGAGTTCGACACCCG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGGGGAGAGTCCCTCTaGTCTTCTTTCTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCGGESL*SSFLAS
Trigger: TGACGCCAAGAAAGAAGAGCAGAGGGACTCTCCCCC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCAAGACATCCAGCTTTaGGGAAATCGGGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVQDIQL*GNRGRV
Trigger: GACTCTCCCCCGATTTCCGCAAAGCTGGATGTCTTG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGGTCCAGCAGCTTGTTaGACTGCTTGCTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVGPAAC*TACSRL
Trigger: AAGCCTTGAGCAAGCAGTGCAACAAGCTGCTGGACC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCGCTCCAGCTGCAGGTaGCTCTCTGAGTTGATCTGG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNRSSCR*LSELIW
Trigger: CCAGATCAACTCAGAGAGGCACCTGCAGCTGGAGCG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCGCTCCAGCTGCAGGTaGCTCTCTGAGTTGATCTGG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRSSCR*LSELIW
Trigger: CCAGATCAACTCAGAGAGGCACCTGCAGCTGGAGCG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCAGACGCTCCGCAATaGGTTCCAGGCTCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERADAPQ*VPGSQG
Trigger: TCCTTGAGAGCCTGGAACGCATTGCGGAGCGTCTGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATCTCCTCTCCCCTCTaGCTCAGAGTCTCGTATAGC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVISSPL*LRVSYS
Trigger: GCTATACGAGACTCTGAGGCAGAGGGGAGAGGAGAT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTGCAGCTTCCTGCTaGTGCTTTACGACCGAGGGG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSAASC*CFTTEG
Trigger: CCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGCAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGATCGGGGACACCTTaGAAGCATCTGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRSGTP*KHLLPP
Trigger: AGGGGGCAGCAGATGCTTGCAAGGTGTCCCCGATCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTCTCTACCAGGCGCTaGACCACCTTTTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLSTRR*TTFSHR
Trigger: TCGGTGGGAAAAGGTGGTGCAGCGCCTGGTAGAGAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCACGAACCATCACTGTaGTTCGCAGGATCCGAACCA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVHEPSL*FAGSEP
Trigger: TGGTTCGGATCCTGCGAAGCACAGTGATGGTTCGTG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCGGGTAGTCGCAGCTTaGTTCCCTGGATTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRVVAA*FPGLVC
Trigger: GCACACCAATCCAGGGAAGCAAGCTGCGACTACCCG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCAGGTGTTCACCTGTaGCTGGAACAAGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSGVHL*LEQAGG
Trigger: GCCCCCTGCTTGTTCCAGCCACAGGTGAACACCTGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCCGTGTCGCTCTGCTaGCCGGCCAGCAGTGACGTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEAVSLC*PASSDV
Trigger: GACGTCACTGCTGGCCGGCCAGCAGAGCGACACGGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGGGTCAGCTTGGTACTaGGGCTCTCCACCCTCATCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERGSAWY*GSPPSS
Trigger: AGATGAGGGTGGAGAGCCCCAGTACCAAGCTGACCC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGCTTCTCACCTCCTaGCAGTGCTGCTATGTGCAC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCELLTS*QCCYVH
Trigger: GTGCACATAGCAGCACTGCCAGGAGGTGAGAAGCTC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCAGATTCCCCTTCGTaGCCTCACTGTGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSDSPS*PHCALQ
Trigger: CTGAAGGGCACAGTGAGGCCACGAAGGGGAATCTGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAATGTTTGCTGGCTTTaGCCTCGCAGGCCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNNVCWL*PRRPGA
Trigger: GGCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCCTGCTTCCAGGACTaGGCCTCGGGAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEACFQD*ASGASG
Trigger: CCCAGAGGCTCCCGAGGCCCAGTCCTGGAAGCAGGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCCTGCTTCAGCCTCTaGGCTGCCTCCAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSCFSL*AASSCW
Trigger: CCAACAACTGGAGGCAGCCCAGAGGCTGAAGCAGGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGAGAGGTCTCCTCGGTaGCCAGCATCATCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNERSPR*PASSCR
Trigger: CCTGCAAGATGATGCTGGCCACCGAGGAGACCTCTC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTCCTTGGCTGTCTCTaGGAGACCTCCCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLLGCL*ETSQRF
Trigger: AAACCTCTGGGAGGTCTCCCAGAGACAGCCAAGGAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGTCTTGGTCAATGTTaGTCTCCGCAGATCGGGGAC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVCLGQC*SPQIGD
Trigger: GTCCCCGATCTGCGGAGACCAACATTGACCAAGACA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGTTGTGGAAGTTCATaGCCAAGTGCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSCGSS*PSAGPP
Trigger: AGGAGGCCCTGCACTTGGCCATGAACTTCCACAACT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTTCATGGAACTGCTTaGCCCTCTTCCTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLHGTA*PSSWLR
Trigger: ACGAAGCCAGGAAGAGGGCCAAGCAGTTCCATGAAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTGGTCTTCTGCCAGCTaGGGCTCAACTCGATACAGC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCWSSAS*GSTRYS
Trigger: GCTGTATCGAGTTGAGCCCCAGCTGGCAGAAGACCA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAAGTCAATGTCCCCGTaGACAGGCTGGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCKSMSP*TGWSSA
Trigger: GGCAGAAGACCAGCCTGTCCACGGGGACATTGACTT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTGGGAGAGCACCATaGAAACGCAGGGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSGRAP*KRRVCS
Trigger: AGAGCAAACCCTGCGTTTCCATGGTGCTCTCCCAGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTACGAGGGAGGGTCAGTaGCCCTCCTCTTATAGGTCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCTREGQ*PSSYRS
Trigger: AGACCTATAAGAGGAGGGCCACTGACCCTCCCTCGT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCGGAAGTGGATCTGTTaGGGGAAGCTCCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCRKWIC*GKLLWM
Trigger: CATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGACTCGACGCGGAAGTaGATCTGTTGGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERDSTRK*ICWGKL
Trigger: GAGCTTCCCCCAACAGATCCACTTCCGCGTCGAGTC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTTGCTTCCCTGGATTaGTGTGCCCTTGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLASLD*CALGCA
Trigger: AGCACACCCAAGGGCACACCAATCCAGGGAAGCAAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGCAGGTGACCTCCTCTaGGGTGTGGGGATTTTAGAA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVAGDLL*GVGILE
Trigger: TTCTAAAATCCCCACACCCCAGAGGAGGTCACCTGC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR CAA 72 bp CAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTaGGATCCCAGTCCTGTGGTGCTCTGTGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QPHGSGALLHVP*DPSPVVLCEVL
Trigger: GAGCACCTCACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTTGAAGGAGTTTaGTGCGCCCAAACTCGATCC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVNLEGV*CAQTRS
Trigger: GGATCGAGTTTGGGCGCATCAAACTCCTTCAAGGTT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAACACTTGGCAAATCTaGGCCCCATTCAGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCNTWQI*APFSAV
Trigger: GACCGCACTGAATGGGGCTCAGATTTGCCAAGTGTT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGGGGATGGACGTCTTaGGTGGGTTGTCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERWGWTS*VGCQDS
Trigger: GGAATCCTGACAACCCACTCAAGACGTCCATCCCCA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTGGGGATGGACGTCTTaGGTGGGTTGTCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNWGWTS*VGCQDS
Trigger: GGAATCCTGACAACCCACTCAAGACGTCCATCCCCA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTCCAGTGGTCTGATTaGTGGTGCCTGCAATCACTT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLQWSD*WCLQSL
Trigger: AAGTGATTGCAGGCACCATCAATCAGACCACTGGAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTGCCTCAAGCAACCTaGTCCCCGTTTCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVPQAT*SPFHSQ
Trigger: TTGACTATGAAACGGGGATCAGGTTGCTTGAGGCAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGGCATCAGGGATGGTaGGGACAGACAGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRHQGW*GQTGFL
Trigger: GAGAAAGCCTGTCTGTCCTCACCATCCCTGATGCCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCTCTGGTCACTGGGTaGCAAAGTAGAGGCTTCGCA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSLVTG*QSRGFA
Trigger: TGCGAAGCCTCTACTTTGTCACCCAGTGACCAGAGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCCTACAGGAAAGCCCTaGGGGCAACATACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVPTGKP*GQHTLF
Trigger: GAACAAAGTATGTTGCCCTCAGGGCTTTCCTGTAGG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGACTCTTACCCATGTTaGGGCTCTCTGTCGCACTTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCDSYPC*GSLSHF
Trigger: GAAGTGCGACAGAGAGCCTCAACATGGGTAAGAGTC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCCAGATGTACTTTCTaGATGCTCTGGGGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSRCTF*MLWGLA
Trigger: AGCGAGCCCCCAGAGCATTCAGAAAGTACATCTGGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCCAGCAGGTTACCATTaGCTTCATCCTCTTCGCCAG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCPAGYH*LHPLRQ
Trigger: CTGGCGAAGAGGATGAAGTCAATGGTAACCTGCTGG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGAAATGACGTCCTCTaGGAAGCTCTTCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRNDVL*EALLPR
Trigger: ACGAGGCAGAAGAGCTTCTCAGAGGACGTCATTTCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTGGGGTCCTAGGGAGTaGTGGACCTCTAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNWGPRE*WTSSCS
Trigger: AGAACAGCTAGAGGTCCATCACTCCCTAGGACCCCA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGGGGCAGGCAGCTaGGAGATGATTCGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNAGAGS*EMIRCV
Trigger: AACACAACGAATCATCTCTCAGCTGCCTGCCCCAGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCGTCAATCTCCTCTCTaGTTGCCTCTGCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCRQSPL*LPLQLP
Trigger: AGGAAGCTGCAGAGGCAATCAGAGAGGAGATTGACG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTTCAATCTGCTGCTTaGCGGTCTCCAGGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLQSAA*RSPGLF
Trigger: GAACAGACCTGGAGACCGTCAAGCAGCAGATTGAAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCATTTCCTGCTTTGTTaGCGGCTTCTACCGTGGACT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVHFLLC*RLLPWT
Trigger: AGTCCACGGTAGAAGCCGTCAACAAAGCAGGAAATG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTAGATGCCAAGAGATaGCGCTCTGTGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLDAKR*RSVSVS
Trigger: GCTGACGGACACAGAGCGTCATCTCTTGGCATCTAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGATACAGCCAATCAATaGGGGCCTGCAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERDTANQ*GPAGHL
Trigger: CAGATGCCCTGCAGGCCCTCATTGATTGGCTGTATC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGGGAGTCTCCAAACTaGTTTCCCAGGAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVWESPN*FPRKNL
Trigger: CAGGTTCTTCCTGGGAAATCAGTTTGGAGACTCCCA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGTGATCCTGGACTaGCAGCTTGCTCAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNAVILD*QLAQFA
Trigger: GGCAAACTGAGCAAGCTGTCAGTCCAGGATCACAGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCATCGTTTGCACCAATaGCTTCGCCACCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERHRLHQ*LRHLRG
Trigger: TCCCCGAAGGTGGCGAAGGCATTGGTGCAAACGATG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTCATCACGCAGCTTTaGAACCCTCTGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLITQL*NPLHQL
Trigger: CAGCTGGTGCAGAGGGTTGCAAAGCTGCGTGATGAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGTTCCGTGGTCAGCATaGGTCCTTTGCTGTACACCG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERVPWSA*VLCCTP
Trigger: CGGTGTACAGCAAAGGACGCATGCTGACCACGGAAC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACACCACACTCCGGTACTaGAGGAGCTCCTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNTTLRY*RSSSFS
Trigger: GGAAAAGGAGGAGCTCCTGCAGTACCGGAGTGTGGT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATTCTGCCAGCTTCCTaGGGTCTCACTGGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVILPAS*GLTGKS
Trigger: GCTTTTACCAGTGAGACCGCAGGAAGCTGGCAGAAT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCTATGATCCCCAGCTaGTTAGCGGCATCCAGACCA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSMIPS*LAASRP
Trigger: TGGTCTGGATGCCGCTAAGCAGCTGGGGATCATAGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCACCTCCTGGCAGTGCTaGTATGTGCACACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERTSWQC*YVHTEG
Trigger: CCCTTCAGTGTGCACATAGCAGCACTGCCAGGAGGT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTCGTGGCCTCACTGTaGCCTTCAGCATCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFVASL*PSASVS
Trigger: GGAGACAGATGCTGAAGGGCACAGTGAGGCCACGAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTGCACCTTCAGCTCCTaGGTGTTCTTCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCCTFSS*VFFCSF
Trigger: GAAGCTGCAGAAGAACACGCAGGAGCTGAAGGTGCA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGTTCTTGCTCGGACTaGTGTAGCCAGTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSSCSD*CSQCSN
Trigger: GTTTGAGCACTGGCTACAGCAGTCCGAGCAAGAACT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGGTTCGCCAGTTCTTaGTCGGACTGCTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRFASS*SDCCSQ
Trigger: CTGGCTACAGCAGTCCGAGCAAGAACTGGCGAACCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTGAGAAGCTCTTCTaGCTCGTCAGCTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSEKLF*LVSLSM
Trigger: CATGGACAAGCTGACGAGGCAGAAGAGCTTCTCAGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCGGGTGTCGAACTCTTaGAGCAGAATCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRVSNS*SRIWTC
Trigger: GCAGGTCCAGATTCTGCTGCAAGAGTTCGACACCCG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCGGGTGTCGAACTCTTaGAGCAGAATCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNRVSNS*SRIWTC
Trigger: GCAGGTCCAGATTCTGCTGCAAGAGTTCGACACCCG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGGGGGAGAGTCCCTCTaGTCTTCTTTCTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERGGESL*SSFLAS
Trigger: TGACGCCAAGAAAGAAGAGCAGAGGGACTCTCCCCC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTCCAGCAGCTTGTTaGACTGCTTGCTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCGPAAC*TACSRL
Trigger: AAGCCTTGAGCAAGCAGTGCAACAAGCTGCTGGACC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATATGTGCGTTAAGCTaGTCCTTGGCTGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVICALS*SLAVSG
Trigger: CCCAGAGACAGCCAAGGAGCAGCTTAACGCACATAT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAAGTTCATGGCCAAGTaGAGGGCCTCCTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVKFMAK*RASSNF
Trigger: AAAGTTGGAGGAGGCCCTGCACTTGGCCATGAACTT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAATTCCTCTGCCTGTTaGAGGGCTGACTCTAGCCGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNNSSAC*RADSSR
Trigger: GCGGCTAGAGTCAGCCCTGCAACAGGCAGAGGAATT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAATTCCTCTGCCTGTTaGAGGGCTGACTCTAGCCGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERNSSAC*RADSSR
Trigger: GCGGCTAGAGTCAGCCCTGCAACAGGCAGAGGAATT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCACGCAGGGTTTGCTCTaGTTCTGCCAGCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERTQGLL*FCQPLQ
Trigger: TTGGAGTGGCTGGCAGAAGCAGAGCAAACCCTGCGT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTTTGCTTCCGGCTCTaGTCCCTGGGCGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELCFRL*SLGGWE
Trigger: CTCCCAGCCGCCCAGGGAGCAGAGCCGGAAGCAAAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGGCGGCTGCTGGCTCTaGTTCCGGCTTTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEGGCWL*FRLCFR
Trigger: CCGGAAGCAAAGCCGGAAGCAGAGCCAGCAGCCGCC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTAGTAGCATGGCTGGCTaGTCTCCCTGTCCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: SRVGGTFARSFGSQSCGASSMAG*SPCPAE
Trigger: CTCCGCTGGACAGGGAGAGCAGCCAGCCATGCTACT...AGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp GGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTTCCACCAGCCCTCTATaGAAAGCCTCGGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: GSGALLHVPLDPSPVVLCSTSPL*KASATL
Trigger: CAGGGTGGCCGAGGCTTTGCATAGAGGGCTGGTGGA...ACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCCCTGAGTTCAGGCTaGGGTGTAAGGTTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCALSSG*GVRFVQ
Trigger: TTGCACAAACCTTACACCCCAGCCTGAACTCAGGGC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTCTCCTCCTTCCTCTaGGCTGCTCATCAACACCCC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNFSSFL*AAHQHP
Trigger: GGGGTGTTGATGAGCAGCCCAGAGGAAGGAGGAGAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGGCGGTTTTCAGTCTaGGTGAGGAGATCACACAGC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCRRFSV*VRRSHS
Trigger: GCTGTGTGATCTCCTCACCCAGACTGAAAACCGCCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTTGCTGCAAGACTTaGCAGCGTCTATCACCCTGT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSCCKT*QRLSPC
Trigger: ACAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCCTTCTGGAGCAGAGTaGAGAACTCCTCCAGCTTAC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCPSGAE*RTPPAY
Trigger: GTAAGCTGGAGGAGTTCTCCACTCTGCTCCAGAAGG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCTGAGACCTCAGAATaGCAGCGTCGATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERAETSE*QRRSPP
Trigger: TGGAGGAGATCGACGCTGCCATTCTGAGGTCTCAGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGAACGGCAGCTTGCATaGCCTCTTCCAGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERERQLA*PLPVCP
Trigger: TGGACAGACTGGAAGAGGCCATGCAAGCTGCCGTTC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTTCGATTTCACCGTaGAACCCTTTGGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSSISP*NPLAWR
Trigger: GCGCCAGGCCAAAGGGTTCCACGGTGAAATCGAAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTCCTTGGCTGTCTCTaGGAGACCTCCCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLLGCL*ETSQRF
Trigger: AAACCTCTGGGAGGTCTCCCAGAGACAGCCAAGGAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCCTGGAGGGAGTTGTaGAAGTTCATGGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSWREL*KFMAKC
Trigger: GCACTTGGCCATGAACTTCCACAACTCCCTCCAGGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGGTCTTCTGCCAGCTaGGGCTCAACTCGATACAGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERWSSAS*GSTRYS
Trigger: GCTGTATCGAGTTGAGCCCCAGCTGGCAGAAGACCA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGTGGACCACAGAGTaGAATTCCTCTGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCVWTTE*NSSACC
Trigger: GCAACAGGCAGAGGAATTCCACTCTGTGGTCCACAC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCACGAGGGAGGGTCAGTaGCCCTCCTCTTATAGGTCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERTREGQ*PSSYRS
Trigger: AGACCTATAAGAGGAGGGCCACTGACCCTCCCTCGT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGGACCTTTAAGGACTaGCCAATGCTAACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCRTFKD*PMLTAW
Trigger: CCAGGCCGTTAGCATTGGCCAGTCCTTAAAGGTCCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAACACTTGGCAAATCTaGGCCCCATTCAGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERNTWQI*APFSAV
Trigger: GACCGCACTGAATGGGGCTCAGATTTGCCAAGTGTT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGGTCTTCCAGTTTGTaGATGCTGCTGGACCTGTCA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCRSSSL*MLLDLS
Trigger: TGACAGGTCCAGCAGCATTCACAAACTGGAAGACCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGAACTTGTTCATCAATaGGGCCGTGGCTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVELVHQ*GRGFQH
Trigger: ATGCTGAAAGCCACGGCCTCATTGATGAACAAGTTC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTGAACCTGGTAAGTaGGGATGCTGCTTGCGGTGT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSEPGK*GCCLRC
Trigger: ACACCGCAAGCAGCATCCTCACTTACCAGGTTCAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTTTCTCTTGTGCTCTaGTCAGCCAACACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVFSLVL*SANTLW
Trigger: CCAGAGAGTGTTGGCTGATCAGAGCACAAGAGAAAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCAGTTTCATCCTTTCTaGGGACACACTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCQFHPF*GHTAEG
Trigger: TCCCTCAGCAGTGTGTCCTCAGAAAGGATGAAACTG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGGTTTTCAGTCTGGGTaGGGAGATCACACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERGFQSG*GDHTAL
Trigger: AAGGGCTGTGTGATCTCCTCACCCAGACTGAAAACC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTGGTCCAGTTTGGTCTaGACTTCTCTGTGGGTTGCG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNWSSLV*TSLWVA
Trigger: CGCAACCCACAGAGAAGTTCAGACCAAACTGGACCA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGGTCCAGTTTGGTCTaGACTTCTCTGTGGGTTGCG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERWSSLV*TSLWVA
Trigger: CGCAACCCACAGAGAAGTTCAGACCAAACTGGACCA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGCAACCTGCTGACTTaGTATCTGTCCTTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSNLLT*YLSLQS
Trigger: GCTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTACAGCAACCTGCTaGCTTGATATCTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSTATC*LDICPC
Trigger: GCAAGGACAGATATCAAGTCAGCAGGTTGCTGTAGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCAGTTCTGCCTCAAATaGCTTGTTCTGCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCQFCLK*LVLLHL
Trigger: CAGGTGGAGCAGAACAAGTCATTTGAGGCAGAACTG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCCTCCTGGGCCTCCTTaGTCTTCGGTGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEPPGPP*SSVPAA
Trigger: AGCAGCAGGCACCGAAGATCAAGGAGGCCCAGGAGG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCCTTAGACATTTGCTaGAACTGGTGTGAGCTCGCA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSLDIC*NWCELA
Trigger: TGCGAGCTCACACCAGTTTCAGCAAATGTCTAAGGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTTGCTCTCTGTACTTaGGGGCTTTTTCCAACGAGT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLALCT*GLFPTS
Trigger: ACTCGTTGGAAAAAGCCCTCAAGTACAGAGAGCAAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACATCAGAGGTTCCCTTTaGGTCTGCGGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNIRGSL*VCGFYH
Trigger: GTGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGAT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCATCAAGCTGCTGGTTaGTTGTCTCGGTTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVHQAAG*LSRFLY
Trigger: GTACAGAAACCGAGACAATCAACCAGCAGCTTGATG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCTTTTCTACAGCTGTaGGCCACTCGTTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSFLQL*ATRSVA
Trigger: AGCCACTGAACGAGTGGCTCACAGCTGTAGAAAAGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCGGCACTCAACTTGGTaGTGTCTTTGTACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCRHSTW*CLCTWL
Trigger: AAGCCAGGTACAAAGACATCACCAAGTTGAGTGCCG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTGTCTCTCTTGCACTTaGCTGGCAGCTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCCLSCT*LAASPF
Trigger: GAAAGGAGAAGCTGCCAGTCAAGTGCAAGAGAGACA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCGTCAATCTCCTCTCTaGTTGCCTCTGCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNRQSPL*LPLQLP
Trigger: AGGAAGCTGCAGAGGCAATCAGAGAGGAGATTGACG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCGTCAATGCTCTTCTTaGCAATGGGTTTGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRQCSS*QWVCQA
Trigger: AGCCTGACAAACCCATTGTCAAGAAGAGCATTGACG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTTCAATCTGCTGCTTaGCGGTCTCCAGGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLQSAA*RSPGLF
Trigger: GAACAGACCTGGAGACCGTCAAGCAGCAGATTGAAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTAGATGCCAAGAGATaGCGCTCTGTGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLDAKR*RSVSVS
Trigger: GCTGACGGACACAGAGCGTCATCTCTTGGCATCTAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTGTACGTCTCTTCCTTaGTGGCAAAGGCGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNCTSLP*WQRRCR
Trigger: TCTGCACCGCCTTTGCCATCAAGGAAGAGACGTACA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGGACCAGCTGGGCTTTaGTTTTGTCTGGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNGPAGL*FCLDRW
Trigger: CCAACGATCCAGACAAAATCAAAGCCCAGCTGGTCC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTCGATTTGCGTCTGTaGGCCAGATGGATAGAAGCC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLDLRL*ARWIEA
Trigger: GGCTTCTATCCATCTGGCTCACAGACGCAAATCGAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCACAGACTGGATTTCTaGAATGTCAAAGTCGGACGC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVHRLDF*NVKVGR
Trigger: GCGTCCGACTTTGACATTTCAGAAATCCAGTCTGTG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTGTGCCCTCTGCGGATaGCACGGGAAAGTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLECALCG*HGKVGA
Trigger: TGCCCCGACTTTCCCGTGTCATCCGCAGAGGGCACA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGGGGCTTTCGGATCTaGATTAGCTTCAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRGFRI*ISFRVC
Trigger: ACAGACTCTGAAGCTAATGCAGATCCGAAAGCCCCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCCAGTTTGTGAATGCTaGTGGACCTGTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCPVCEC*WTCHSC
Trigger: ACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CCATCTCCAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGACCACACTCCGGTACTaGAGGAGCTCCTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PSPASRVGGTFARSFGSQTTLRY*RSSSFS
Trigger: GGAAAAGGAGGAGCTCCTGCAGTACCGGAGTGTGGT...CTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTGGAGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTCGACAAGCTGGTCTaGCTTTTCTTTGTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVFDKLV*LFFVPV
Trigger: GACTGGCACAAAGAAAAGGCAGACCAGCTTGTCGAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGCTTTCCAGAAGCATaGCCACGGCCTCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSFPEA*PRPHPS
Trigger: ACTTGGATGAGGCCGTGGGCATGCTTCTGGAAAGCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTCCTTCCTCTGGGCTaGTCATCAACACCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLLPLG*SSTPLL
Trigger: AAGAAGGGGTGTTGATGAGCAGCCCAGAGGAAGGAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTGTGGCTTTTCTTCTaGCATCTTGGGAACAGCACA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVWLFF*HLGNST
Trigger: TGTGCTGTTCCCAAGATGGCAGAAGAAAAGCCACAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTCACCTCCTGGCAGTaGTGCTATGTGCACACTGAA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLTSWQ*CYVHTE
Trigger: TTCAGTGTGCACATAGCAGCACTGCCAGGAGGTGAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTCAGCAGTTGTCTaGTTTGGCTGGGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCVSAVV*FGWETD
Trigger: ATCTGTCTCCCAGCCAAAGCAGACAACTGCTGAGAC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGGTTACCAGCTCCTaGAGGTCAAGAAAACCCTTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCVVTSS*RSRKPF
Trigger: GAAGGGTTTTCTTGACCTGCAGGAGCTGGTAACCAC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTGCACCTTCAGCTCCTaGGTGTTCTTCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNCTFSS*VFFCSF
Trigger: GAAGCTGCAGAAGAACACGCAGGAGCTGAAGGTGCA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTGGTCTCTTCCAGCTaGCTTTGCAGATTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLVSSS*LCRFLG
Trigger: CCCCAAAAATCTGCAAAGGCAGCTGGAAGAGACCAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTTAGTGTCCATCTCTaGCAGTGCCTGCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLSVHL*QCLLPG
Trigger: TCCTGGAAGCAGGCACTGGCAGAGATGGACACTAAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTCACAGCTTCCAGTTaGTCGTTCACAATCCCATGT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVTASS*SFTIPC
Trigger: ACATGGGATTGTGAACGAGCAACTGGAAGCTGTGAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCAGTTCACATCTTGCTaGTTCACCTGCAAGGGTTCG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCQFTSC*FTCKGS
Trigger: CGAACCCTTGCAGGTGAAGCAGCAAGATGTGAACTG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCAGTTCACATCTTaGTGCTTCACCTGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVNQFTS*CFTCKG
Trigger: ACCCTTGCAGGTGAAGCAGCAAGATGTGAACTGGTT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCAGGTGTTTGCAGCTaGGCTCTGAATAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERAGVCS*ALNKAL
Trigger: CAAGGCCTTATTCAGAGCGCAGCTGCAAACACCTGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCAGTTGACGGTTCCTTaGTTCAGCTCTGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNQLTVP*FSSAQE
Trigger: CTCCTGAGCAGAGCTGAAGCAAGGAACCGTCAACTG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCAGAGGTCTGGTCTTaGTCAAGTCTGATGTCACCC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERAEVWS*SSLMSP
Trigger: GGGTGACATCAGACTTGAGCAAGACCAGACCTCTGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGAGGTCTGGTCTTaGTCAAGTCTGATGTCACCC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNAEVWS*SSLMSP
Trigger: GGGTGACATCAGACTTGAGCAAGACCAGACCTCTGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAATCTCCTCTCTGATTaGCTCTGCAGCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCNLLSD*LCSFLL
Trigger: CAGCAGGAAGCTGCAGAGGCAATCAGAGAGGAGATT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGCTCTTCAATCTGCTaGTTGACGGTCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSSSIC*LTVSRS
Trigger: AGACCTGGAGACCGTCAAGCAGCAGATTGAAGAGCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTTGTACTGGAGGTTaGTTGCTTCTTCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCACTGG*LLLRLH
Trigger: GTGAAGGCGAAGAAGCAAGCAACCTCCAGTACAAGC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAACCTCTGCTGGTGCTaGTTCGCCCAGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLENLCWC*FAQAST
Trigger: GGTGCTGGCCTGGGCGAAGCAGCACCAGCAGAGGTT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGAAGGTCTGGTGTTCTaGAATGAGGGTTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVEGLVF*NEGFHL
Trigger: GAGGTGAAAACCCTCATTGCAGAACACCAGACCTTC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCTGTCAAAGATGTCTaGCACGGCGCTCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSVKDV*HGAHLQ
Trigger: CTGGAGATGAGCGCCGTGGCAGACATCTTTGACAGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCACGAACCATCACTGTaGTTCGCAGGATCCGAACCA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNHEPSL*FAGSEP
Trigger: TGGTTCGGATCCTGCGAAGCACAGTGATGGTTCGTG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGACATAGTGACCACGTaGTGTCTAATCCACTGGATG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVDIVTT*CLIHWM
Trigger: CATCCAGTGGATTAGACACCACGTGGTCACTATGTC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCCCTCTGAACTCGGGTaGCAATCTGCTGCAGCATAT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNPSELG*QSAAAY
Trigger: ATATGCTGCAGCAGATTGCCACCCGAGTTCAGAGGG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCCCTCTGAACTCGGGTaGCAATCTGCTGCAGCATAT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERPSELG*QSAAAY
Trigger: ATATGCTGCAGCAGATTGCCACCCGAGTTCAGAGGG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCAGCTGTACTTGCGCTaGATGGCATCTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVQLYLR*MASFRF
Trigger: GAATCTGAAAGATGCCATCCAGCGCAAGTACAGCTG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTTTGTGAATGCTGCTaGACCTGTCACAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVCECC*TCHSCT
Trigger: AGTACAGCTGTGACAGGTCCAGCAGCATTCACAAAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTCCTCCTTTTCCATaGACTCCTGGACAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCAPPFP*TPGQGL
Trigger: AAGACCTTGTCCAGGAGTCCATGGAAAAGGAGGAGC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTGGATGTCATTCTTaGCAGGAAGCAGCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSGCHS*QEAASP
Trigger: AGGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCCCCTGGTAAGCCATaGCTGGATATCTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSPGKP*LDISFR
Trigger: CCTGAAAGAGATATCCAGCCATGGCTTACCAGGGGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTGTCCATGGTCAACTaGTTGAGCTCTTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLSMVN*LSSCHL
Trigger: TAAGTGGCAAGAGCTCAACCAGTTGACCATGGACAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTTTTGACGATAGCCTaGTCAATCCAGTCGCATCTG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLLTIA*SIQSHL
Trigger: CAGATGCGACTGGATTGACCAGGCTATCGTCAAAAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTGCTCTTCTTTCTTaGCGTCAAGCCATGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSALLS*RQAMLG
Trigger: TCCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGACTGTCTTACTTTaGAGCTGCTCAGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCETVLL*SCSVTL
Trigger: CAGGGTCACTGAGCAGCTCCAAAGTAAGACAGTCTC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTGTTCTTCAGCCTTCTaGAGCAGAGTGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCCSSAF*SRVENS
Trigger: GGAGTTCTCCACTCTGCTCCAGAAGGCTGAAGAACA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTACGGAGGCTTTTGATTaGCCACAAGCTCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCTEAFD*PQAPLC
Trigger: ACACAGAGGAGCTTGTGGCCAATCAAAAGCCTCCGT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCCAGGTCTGTTCCAATaGGAGACATTGTGGCTAACT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVPGLFQ*ETLWLT
Trigger: AGTTAGCCACAATGTCTCCCATTGGAACAGACCTGG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGTTGTGGAAGTTCATaGCCAAGTGCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSCGSS*PSAGPP
Trigger: AGGAGGCCCTGCACTTGGCCATGAACTTCCACAACT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCCTGGAGGGAGTTGTaGAAGTTCATGGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSWREL*KFMAKC
Trigger: GCACTTGGCCATGAACTTCCACAACTCCCTCCAGGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCCTGGAGGGAGTTGTaGAAGTTCATGGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSWREL*KFMAKC
Trigger: GCACTTGGCCATGAACTTCCACAACTCCCTCCAGGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCGTCTGCTTTGATATaGAGAGTGCACACACGGTCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCASALI*RVHTRS
Trigger: AGACCGTGTGTGCACTCTCCATATCAAAGCAGACGC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGCATCCTCATCATCTaGGAGAGCACCATGGAAACG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSILII*ESTMET
Trigger: CGTTTCCATGGTGCTCTCCCAGATGATGAGGATGCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTACGCATCTTTGTTTaGATGCAGAGCGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCVRIFV*MQSGHE
Trigger: TTCGTGGCCGCTCTGCATCCAAACAAAGATGCGTAC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGGCTTGGCTGTGGATaGCCGAGAACCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLERLGCG*PRTCSG
Trigger: CCCCGAGCAGGTTCTCGGCCATCCACAGCCAAGCCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTACTTGTCTAATTTGCTaGCAGGTGACCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCTCLIC*QVTSSG
Trigger: CCCAGAGGAGGTCACCTGCCAGCAAATTAGACAAGT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGGGGGCAATCACTAATTCACACTaGCGTAGCTGCTGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: QRTSLPAGSHLQPHGSGAITNSH*RSCWAK
Trigger: CTTCGCCCAGCAGCTACGCCAGTGTGAATTAGTGAT...TGCCCCCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGTTTGTCTTCGCAGCTaGCACTATCCCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNVCLRS*HYPSEL
Trigger: GAGTTCAGAGGGATAGTGTCAGCTGCGAAGACAAAC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGCTCTGAGTATTTCTaGCACTCGTCCATTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVCSEYF*HSSILL
Trigger: GAGCAAAATGGACGAGTGTCAGAAATACTCAGAGCA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGCCGAGTACTGCTCTaGGTATTTCTGACACTCGTC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSRVLL*VFLTLV
Trigger: GACGAGTGTCAGAAATACTCAGAGCAGTACTCGGCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTCCCAGGGTCTTGCTaGTATTTGATACCCATTTCT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLPGSC*YLIPIS
Trigger: AGAAATGGGTATCAAATATCAGCAAGACCCTGGGAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGGTCTGAAGAGCTTCTaGGAACTGCTCCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERGLKSF*ELLLLG
Trigger: ACCAAGAAGGAGCAGTTCTCAGAAGCTCTTCAGACC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTCCAGTGGTCTGATTaGTGGTGCCTGCAATCACTT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLQWSD*WCLQSL
Trigger: AAGTGATTGCAGGCACCATCAATCAGACCACTGGAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCATCCATTCCTCCATaGGGAAACTCGGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSSIPP*GNSGFS
Trigger: GGAAAATCCCGAGTTTCCTCATGGAGGAATGGATGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCAGTTTCATCCTTTCTaGGGACACACTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERQFHPF*GHTAEG
Trigger: TCCCTCAGCAGTGTGTCCTCAGAAAGGATGAAACTG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGGACATTCACAGTTTaGATGGCCTTCACAGATCTG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVWTFTV*MAFTDL
Trigger: CAGATCTGTGAAGGCCATTCAAACTGTGAATGTCCA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGATCCACCAGGTCTTTaGGGTTATTTCCAAGAACAC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVDPPGL*GYFQEH
Trigger: GTGTTCTTGGAAATAACCTCAAAGACCTGGTGGATC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCTACAGCAACCTGCTaGCTTGATATCTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSTATC*LDICPC
Trigger: GCAAGGACAGATATCAAGTCAGCAGGTTGCTGTAGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCAGTTCTGCCTCAAATaGCTTGTTCTGCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERQFCLK*LVLLHL
Trigger: CAGGTGGAGCAGAACAAGTCATTTGAGGCAGAACTG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCAGTTCTGCCTCAAATaGCTTGTTCTGCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNQFCLK*LVLLHL
Trigger: CAGGTGGAGCAGAACAAGTCATTTGAGGCAGAACTG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCATCAAGCTGCTGGTTaGTTGTCTCGGTTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCHQAAG*LSRFLY
Trigger: GTACAGAAACCGAGACAATCAACCAGCAGCTTGATG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTTTTCTACAGCTGTaGGCCACTCGTTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSFLQL*ATRSVA
Trigger: AGCCACTGAACGAGTGGCTCACAGCTGTAGAAAAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTTCTGTGTTTCAGTaGTCCAGGATAACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSSVFQ*SRITRH
Trigger: ATGCCGAGTTATCCTGGATCACTGAAACACAGAAGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTCTTGCTCAAGTCTaGTGTCACCCAGAGACATTA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCGLAQV*CHPETL
Trigger: TAATGTCTCTGGGTGACATCAGACTTGAGCAAGACC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTTCACTCGACTCGATaGGATCATTTCCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLHSTR*DHFLLC
Trigger: ACAAAGCAGGAAATGATCTCATCGAGTCGAGTGAAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCCTGCATCTGGACCCTaGCCCAGGAGGAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEPASGP*PRRSHL
Trigger: GAGATGACTCCTCCTGGGTCAGGGTCCAGATGCAGG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCTGGTGTTCTGCAATaGGGGTTTTCACCTCTTCGA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSGVLQ*GFSPLR
Trigger: TCGAAGAGGTGAAAACCCTCATTGCAGAACACCAGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGGGAGTCTCCAAACTaGTTTCCCAGGAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERWESPN*FPRKNL
Trigger: CAGGTTCTTCCTGGGAAATCAGTTTGGAGACTCCCA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp ACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGCTGTTCCAGATCACTaGGGCTCGAGTCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TGRGHFCTFLWIPVLWCSAVPDH*GSSLSS
Trigger: GGAGGAAAGACTCGAGCCTCAGTGATCTGGAACAGC...AGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp ACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTCCGTCTCCTCTCTTCTaGGAGGTCCTTCTCATCCCT +
Preference number: 4 (lower is better)
Translates to: TGRGHFCTFLWIPVLWCSPSPLF*EVLLIP
Trigger: AGGGATGAGAAGGACCTCTCAGAAGAGAGGAGACGG...AGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp CAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGGGGGCATTGGTGTTCCGTAACTaGTCCTTAAAACCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: QRTSLPAGSHLQPHGSGALVFRN*SLKPSA
Trigger: GGCAGACGGTTTTAAGGATCAGTTACGGAACACCAA...TGCCCCCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCAGCATGCGTCCTTTaGTGTACACCGAAGAACATT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSACVL*CTPKNI
Trigger: AATGTTCTTCGGTGTACAGCAAAGGACGCATGCTGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATCGCTGATGGCTTTTaGTTTCTGCAACTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVIADGF*FLQLVF
Trigger: GAAGACGAGTTGCAGAAAGCAAAAGCCATCAGCGAT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCAGGGCCAGGGCTTTaGTGTTTTCTGGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERAGPGL*CFLADF
Trigger: AAAATCAGCCAGAAAACAGCAAAGCCCTGGCCCTGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCCGTAAGCCCCGTTTaGACATTCTTCGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSVSPV*TFFASP
Trigger: AGGTGAAGCGAAGAATGTGCAAACGGGGCTTACGGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTGCTTTCTCTCTGCTaGTTTCTAACTGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLLSLC*FLTAGS
Trigger: GCTGCCCGCAGTTAGAAAGCAGCAGAGAGAAAGCAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGTTGGTGGCTTTTaGTCAGTTCCTCATGATGTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVNVGGF*SVPHDV
Trigger: GACATCATGAGGAACTGAGCAAAAGCCACCAACGTT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGTCTCAGCAGTTGTCTaGTTTGGCTGGGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNVSAVV*FGWETD
Trigger: ATCTGTCTCCCAGCCAAAGCAGACAACTGCTGAGAC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCTGAGAAGCTCTTCTaGCTCGTCAGCTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSEKLF*LVSLSM
Trigger: CATGGACAAGCTGACGAGGCAGAAGAGCTTCTCAGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCACTGTCTCTCTTGCTaGAAGACTTGGCAGCGTCTA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERHCLSC*KTWQRL
Trigger: TAGACGCTGCCAAGTCTTGCAGCAAGAGAGACAGTG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCACTGTCTCTCTTGCTaGAAGACTTGGCAGCGTCTA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNHCLSC*KTWQRL
Trigger: TAGACGCTGCCAAGTCTTGCAGCAAGAGAGACAGTG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTGGTCTCTTCCAGCTaGCTTTGCAGATTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLVSSS*LCRFLG
Trigger: CCCCAAAAATCTGCAAAGGCAGCTGGAAGAGACCAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTTGATATCTGTCCTTaGAAAGCCTTGGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLDICP*KALVSS
Trigger: GGAAGAGACCAAGGCTTTGCAAGGACAGATATCAAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGAGAGCTTCTCAAACTaGTCTACTTTGGCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVESFSN*STLAFS
Trigger: GCTAAAGGCCAAAGTAGAGCAGTTTGAGAAGCTCTC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCTTCCAGCTTTTGTTaGCTGTCCATGGTCAACTGG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSSSFC*LSMVNW
Trigger: CCAGTTGACCATGGACAGGCAACAAAAGCTGGAAGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGAATCTGGACCTGCTaGTTCTGTGTGTTCAACATG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRIWTC*FCVFNM
Trigger: CATGTTGAACACACAGAAGCAGCAGGTCCAGATTCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGCAGAATCTGGACCTaGTGCTTCTGTGTGTTCAAC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSRIWT*CFCVFN
Trigger: GTTGAACACACAGAAGCAGCAGGTCCAGATTCTGCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGCAGCTTGTTGCACTaGTTGCTCAAGGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSSLLH*LLKASK
Trigger: CTTAGAAGCCTTGAGCAAGCAGTGCAACAAGCTGCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCAGTTCACATCTTGCTaGTTCACCTGCAAGGGTTCG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERQFTSC*FTCKGS
Trigger: CGAACCCTTGCAGGTGAAGCAGCAAGATGTGAACTG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCAGTTCACATCTTGCTaGTTCACCTGCAAGGGTTCG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNQFTSC*FTCKGS
Trigger: CGAACCCTTGCAGGTGAAGCAGCAAGATGTGAACTG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCTTGTAGAGCCTTGTaGTGTGAAATCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSCRAL*CEICSS
Trigger: GGAGGAGCAGATTTCACAGCACAAGGCTCTACAAGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCATCTCCTCCACTTTCTaGGTGATTGTGTCGCTCACC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERISSTF*VIVSLT
Trigger: GGTGAGCGACACAATCACGCAGAAAGTGGAGGAGAT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACATCTCCTCCACTTTCTaGGTGATTGTGTCGCTCACC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNISSTF*VIVSLT
Trigger: GGTGAGCGACACAATCACGCAGAAAGTGGAGGAGAT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTAGAGGGTGTCGGCTaGCACATACTTTTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCVEGVG*HILFLD
Trigger: ATCCAAGAAAAGTATGTGGCAGCCGACACCCTCTAC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCAGCTTCCTGCTGCTaGTTTACGACCGAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEAASCC*FTTEGS
Trigger: CGACCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTGTGGCTAACTTGTTaGCTGCGATGTCAACCCAGT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLWLTC*LRCQPS
Trigger: ACTGGGTTGACATCGCAGGCAACAAGTTAGCCACAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGCTCTTCAATCTGCTaGTTGACGGTCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSSSIC*LTVSRS
Trigger: AGACCTGGAGACCGTCAAGCAGCAGATTGAAGAGCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTCAGCTCTTCAATCTaGTGCTTGACGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNFSSSI*CLTVSR
Trigger: CCTGGAGACCGTCAAGCAGCAGATTGAAGAGCTGAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGACTGTGTGCTTGTCTaGCTCCTCTGTTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVDCVLV*LLCYFL
Trigger: AAGAAAGTAACAGAGGAGGCAGACAAGCACACAGTC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCTTGTACTGGAGGTTaGTTGCTTCTTCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERACTGG*LLLRLH
Trigger: GTGAAGGCGAAGAAGCAAGCAACCTCCAGTACAAGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTTCAGGTTGTCATCTaGCAGGGAGGTTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLQVVI*QGGFLL
Trigger: AAGGAGAAAACCTCCCTGGCAGATGACAACCTGAAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTACACTTGGCTACCTaGCTTGTGACCTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLHLAT*LVTSSS
Trigger: TGAGGACGAGGTCACAAGGCAGGTAGCCAAGTGTAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGGGGGCACTGCTTGAGCGTTTCTaGGCACTCATTGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: QRTSLPAGSHLQPHGSGALLERF*ALIAFL
Trigger: GAGAAAAGCAATGAGTGCGCAGAAACGCTCAAGCAG...TGCCCCCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTGATGGTCAAGCGGGCTaGGTGGTTTTCCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SRVGGTFARSFGSQSCGADGQAG*VVFQKQ
Trigger: CTGCTTCTGGAAAACCACCCAGCCCGCTTGACCATC...AGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCAGCTGTACTTGCGCTaGATGGCATCTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCQLYLR*MASFRF
Trigger: GAATCTGAAAGATGCCATCCAGCGCAAGTACAGCTG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGAGCCTGAGAATATCTaGGATTCCTGGCTATCCTCC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCEREPENI*DSWLSS
Trigger: GGAGGATAGCCAGGAATCCCAGATATTCTCAGGCTC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCATCAATGAGGCCGTaGCTTTCAGCATCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSSMRP*LSASLR
Trigger: CCTCAGAGATGCTGAAAGCCACGGCCTCATTGATGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTCAAGCACTCGGATaGCCATGGATTCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSQALG*PWILRP
Trigger: TGGTCTCAGAATCCATGGCCATCCGAGTGCTTGAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCATGGTTGTTGTCATaGTTGTTGTGTGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSWLLS*LLCAEP
Trigger: GGGCTCCGCACACAACAACCATGACAACAACCATGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTCTCCTACAGCTTGTaGGTTCAGGGGACAGTGATG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNFSYSL*VQGTVM
Trigger: CATCACTGTCCCCTGAACCCACAAGCTGTAGGAGAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCGTTCTGTAAACGTTaGTGGCTTTTGCTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCAFCKR*WLLLSS
Trigger: GGAACTGAGCAAAAGCCACCAACGTTTACAGAACGC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCCTCTTGCTTGGACTaGTACTTCTGTAACTCCACC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSSCLD*YFCNST
Trigger: GGTGGAGTTACAGAAGTACCAGTCCAAGCAAGAGGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTTCGTTCACACACTTaGACAGATCATCGTATCTCC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVRSHT*TDHRIS
Trigger: GGAGATACGATGATCTGTCCAAGTGTGTGAACGAAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTGGTAAGCCATGGCTaGATATCTCTTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLVSHG*ISLSGG
Trigger: GCCTCCTGAAAGAGATATCCAGCCATGGCTTACCAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCCCCTGGTAAGCCATaGCTGGATATCTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSPGKP*LDISFR
Trigger: CCTGAAAGAGATATCCAGCCATGGCTTACCAGGGGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCAACGGGAACCTGCTTaGTTGTCTCTTTTATCCATG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVQREPA*LSLLSM
Trigger: CATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGACTGCATCATTGCACTaGACTCTTCCTGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVTASLH*TLPEPF
Trigger: AAAAGGCTCAGGAAGAGTCCAGTGCAATGATGCAGT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGGCCTCGGGAGCCTCTaGGTTCTCTTCCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEGLGSL*VLFQKL
Trigger: GAGCTTCTGGAAGAGAACCCAGAGGCTCCCGAGGCC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTGTGGTCTGGAACTaGGTTAGATTATTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSVVWN*VRLLED
Trigger: GTCCTCCAATAATCTAACCCAGTTCCAGACCACAGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTTGCAGCAGAATCTaGACCTGCTGCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSCSRI*TCCFCV
Trigger: CACACAGAAGCAGCAGGTCCAGATTCTGCTGCAAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCTTGCAGCAGAATCTaGACCTGCTGCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSCSRI*TCCFCV
Trigger: CACACAGAAGCAGCAGGTCCAGATTCTGCTGCAAGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTTCTCAGCAGGCTCTaGTACTGTGTGCTTTTGACG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLLSRL*YCVLLT
Trigger: CGTCAAAAGCACACAGTACCAGAGCCTGCTGAGAAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGCGTCAAGCCATGCTTaGAAATCCTTAGACATTTGC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVASSHA*KSLDIC
Trigger: GCAAATGTCTAAGGATTTCCAAGCATGGCTTGACGC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAAGTGGCCGAGACCCTaGAGCTTGGTTTCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCKWPRP*SLVSKK
Trigger: TTTCTTAGAAACCAAGCTCCAGGGTCTCGGCCACTT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGACAGCTCCTTGTGCATaGACTGCAGCTGGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLETAPCA*TAAGRR
Trigger: TCGCCGGCCAGCTGCAGTCCATGCACAAGGAGCTGT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCATCTTATCTATGTGTaGCTTGTGCTCGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVHLIYV*LVLGYQ
Trigger: CTGATAGCCGAGCACAAGCCACACATAGATAAGATG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCCAGGTCTGTTCCAATaGGAGACATTGTGGCTAACT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCPGLFQ*ETLWLT
Trigger: AGTTAGCCACAATGTCTCCCATTGGAACAGACCTGG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCACTTAGCAAGCCTTTaGTGTGTGTCAGCCATGCGA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNHLASL*CVSAMR
Trigger: TCGCATGGCTGACACACACCAAAGGCTTGCTAAGTG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCAGTTGATGAAGTCCTaGAGGGAGTTGTGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCQLMKS*RELWKF
Trigger: GAACTTCCACAACTCCCTCCAGGACTTCATCAACTG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTGAAATACTTCAGGTaGGTTCCAGTCTTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLKYFR*VPVLSN
Trigger: GTTGGACAAGACTGGAACCCACCTGAAGTATTTCAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTGTGCTGGACCAGCTaGGCTTTGATTTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLCWTS*ALILSG
Trigger: TCCAGACAAAATCAAAGCCCAGCTGGTCCAGCACAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTCCAGTTCGGTTGGTaGTATCGTAGACAGAATGTT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVQFGW*YRRQNV
Trigger: AACATTCTGTCTACGATACCACCAACCGAACTGGAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGTCGAAATCGAAGTTaGCAAATTCCCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVCRNRS*QIPSAP
Trigger: AGGAGCTGAGGGAATTTGCCAACTTCGATTTCGACA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGTACGCATCTTTGTTTaGATGCAGAGCGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNVRIFV*MQSGHE
Trigger: TTCGTGGCCGCTCTGCATCCAAACAAAGATGCGTAC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCACTTGTCTAATTTGCTaGCAGGTGACCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERTCLIC*QVTSSG
Trigger: CCCAGAGGAGGTCACCTGCCAGCAAATTAGACAAGT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGGGGGCATCCTTCTCCGTTTTCTaGATGATCATGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QRTSLPAGSHLQPHGSGASFSVF*MIMLCW
Trigger: CCAGCAGAGCATGATCATCCAGAAAACGGAGAAGGA...TGCCCCCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp CAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGGGGGCATTATCCGACTCTTCCTaGAGCAGGATCATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QRTSLPAGSHLQPHGSGALSDSS*SRIIFL
Trigger: CAGGAAGATGATCCTGCTCCAGGAAGAGTCGGATAA...TGCCCCCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTTCCTTCTGTCTGGTGTaGCTCCTGAGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SRVGGTFARSFGSQSCGASFCLV*LLSPPG
Trigger: TCCAGGTGGACTCAGGAGCCACACCAGACAGAAGGA...AGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp GGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTATACTCCGAGTAGCATaGCTGGCTGCTCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GSGALLHVPLDPSPVVLCILRVA*LAALPV
Trigger: GACAGGGAGAGCAGCCAGCCATGCTACTCGGAGTAT...ACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCCTCTGACTCTCCAGTaGCATGGATGTCAGATATCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERPLTLQ*HGCQIS
Trigger: AGATATCTGACATCCATGTCACTGGAGAGTCAGAGG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCTTCTGTCAAGTTCTaGTCCAGCAAAGACGACTTG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSSVKF*SSKDDL
Trigger: CAAGTCGTCTTTGCTGGATCAGAACTTGACAGAAGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCGAGATGTCGCTCCTaGTTTCTGGATGTATTCAAG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSRCRS*FLDVFK
Trigger: CTTGAATACATCCAGAAATCAGGAGCGACATCTCGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTACTCATGCCAGAGAGTaGGTACACTCTGATACTGTT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCTHARE*VHSDTV
Trigger: AACAGTATCAGAGTGTACTCACTCTCTGGCATGAGT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTCTGTCGATTTCATTaGCTAGATAGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVFCRFH*LDSARR
Trigger: TCTCCTGGCACTATCTAGTCAATGAAATCGACAGAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTGGTTTCGTAGAGTTTaGCAAGGGCTTCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNWFRRV*QGLLQL
Trigger: AAGCTGCAGAAGCCCTTGTCAAACTCTACGAAACCA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTGCTCTGAGTATTTCTaGCACTCGTCCATTTTGCTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCCSEYF*HSSILL
Trigger: GAGCAAAATGGACGAGTGTCAGAAATACTCAGAGCA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CCATCTCCAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGAGCCGAGTACTGCTCTaGGTATTTCTGACACTCGTC +
Preference number: 4 (lower is better)
Translates to: PSPASRVGGTFARSFGSQSRVLL*VFLTLV
Trigger: GACGAGTGTCAGAAATACTCAGAGCAGTACTCGGCT...CTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTGGAGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTCCCAGGGTCTTGCTaGTATTTGATACCCATTTCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLPGSC*YLIPIS
Trigger: AGAAATGGGTATCAAATATCAGCAAGACCCTGGGAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGAACTTGTTCATCAATaGGGCCGTGGCTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNELVHQ*GRGFQH
Trigger: ATGCTGAAAGCCACGGCCTCATTGATGAACAAGTTC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTGAGCTCTGAGCTGTaGCTGGCTCTTCGCCATCAG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELSSEL*LALRHQ
Trigger: CTGATGGCGAAGAGCCAGTCACAGCTCAGAGCTCAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTAGATGGACTTTCTaGGCCTTTCTGAACAACTGT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSRWTF*AFLNNC
Trigger: ACAGTTGTTCAGAAAGGCTCAGAAAGTCCATCTAGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCACTTCCTGTAAATaGCAAATGGCCATCCTCAGA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCVTSCK*QMAILR
Trigger: TCTGAGGATGGCCATTTGTCATTTACAGGAAGTGAC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATCCACCAGGTCTTTaGGGTTATTTCCAAGAACAC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCDPPGL*GYFQEH
Trigger: GTGTTCTTGGAAATAACCTCAAAGACCTGGTGGATC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGCAACCTGCTGACTTaGTATCTGTCCTTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSNLLT*YLSLQS
Trigger: GCTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTACAGCAACCTGCTaGCTTGATATCTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSTATC*LDICPC
Trigger: GCAAGGACAGATATCAAGTCAGCAGGTTGCTGTAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTTTCCATCAATGACTaGTTCTCCTCCGTGACCGCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFSIND*FSSVTA
Trigger: AGCGGTCACGGAGGAGAATCAGTCATTGATGGAAAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTTGGAGCTGCTCAGTaGCCCTGTTTACCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFGAAQ*PCLPFP
Trigger: TGGAAAAGGTAAACAGGGTCACTGAGCAGCTCCAAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTGTTCTTTTGTATCCTaGAGCTGCCTTTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCCSFVS*SCLWVS
Trigger: AGACACCCAAAGGCAGCTTCAGGATACAAAAGAACA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCATCAAGCTGCTGGTTaGTTGTCTCGGTTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERHQAAG*LSRFLY
Trigger: GTACAGAAACCGAGACAATCAACCAGCAGCTTGATG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCGGACGGAGGCTTTTaGTTGGCCACAAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEADGGF*LATSSS
Trigger: AGAGGAGCTTGTGGCCAATCAAAAGCCTCCGTCCGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCACTGCTCACTTCATTaGGAGAATCCACTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCHCSLH*ENPLRL
Trigger: AAGCCTTAGTGGATTCTCTCAATGAAGTGAGCAGTG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGGTGCCTCTCTGAGTTaGTCTGGCAGACGGCATCGT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEGASLS*SGRRHR
Trigger: ACGATGCCGTCTGCCAGATCAACTCAGAGAGGCACC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCAGGCAGCTGAGAGATaGTTCGTTGTGTTTCCGTTA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNQAAER*FVVFPL
Trigger: TAACGGAAACACAACGAATCATCTCTCAGCTGCCTG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCGTCAATGCTCTTCTTaGCAATGGGTTTGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRQCSS*QWVCQA
Trigger: AGCCTGACAAACCCATTGTCAAGAAGAGCATTGACG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCATCTTGTTTCTGACTaGAATACTTCAGGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVHLVSD*NTSGGF
Trigger: GAACCCACCTGAAGTATTTCAGTCAGAAACAAGATG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATCCAGAGATTTTTCTaGCTCTTCCAGCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVIQRFF*LFQPFH
Trigger: ATGGAATGGCTGGAAGAGTCAGAAAAATCTCTGGAT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCCTGCAGGGCATCTGTaGACTGTCCAGAAAATAACA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNPAGHL*TVQKIT
Trigger: TGTTATTTTCTGGACAGTTCACAGATGCCCTGCAGG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCACAGACTGGATTTCTaGAATGTCAAAGTCGGACGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERHRLDF*NVKVGR
Trigger: GCGTCCGACTTTGACATTTCAGAAATCCAGTCTGTG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCACAGACTGGATTTCTaGAATGTCAAAGTCGGACGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNHRLDF*NVKVGR
Trigger: GCGTCCGACTTTGACATTTCAGAAATCCAGTCTGTG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGGGGGCAAAACCTGTTGCAGCCTaGGCTTCTAAAAAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: QRTSLPAGSHLQPHGSGAKPVAA*ASKKAR
Trigger: TCTAGCCTTTTTAGAAGCTCAGGCTGCAACAGGTTT...TGCCCCCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp GCCCTCAGCACCGAGATACTCAGTGAGCAAGGCAGGCGAGTGGACCCAGGCTTTAGCACCGAGCCCCCTTaGATCTTTCTTTTGGATCTC +
Preference number: 4 (lower is better)
Translates to: ALSTEILSEQGRRVDPGFSTEPP*IFLLDL
Trigger: GAGATCCAAAAGAAAGATTCAAGGGGGCTCGGTGCT...AAAGCCTGGGTCCACTCGCCTGCCTTGCTCACTGAGTATCTCGGTGCTGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGGGGCTTTCGGATCTaGATTAGCTTCAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNRGFRI*ISFRVC
Trigger: ACAGACTCTGAAGCTAATGCAGATCCGAAAGCCCCT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGTCACAGCTGTACTTaGGCTGGATGGCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERCHSCT*AGWHLS
Trigger: TGAAAGATGCCATCCAGCGCAAGTACAGCTGTGACA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTGTCACAGCTGTACTTaGGCTGGATGGCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNCHSCT*AGWHLS
Trigger: TGAAAGATGCCATCCAGCGCAAGTACAGCTGTGACA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCGATGAGAGTTGTTTaGCAAGACACACTCATCGTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSMRVV*QDTLIV
Trigger: GACGATGAGTGTGTCTTGGCAAACAACTCTCATCGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTACACAGATTCCTCTTaGTCCTCTCTTTCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCYTDSS*SSLSAD
Trigger: GTCTGCAGAAAGAGAGGAGCAAGAGGAATCTGTGTA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTCGACAAGCTGGTCTaGCTTTTCTTTGTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFDKLV*LFFVPV
Trigger: GACTGGCACAAAGAAAAGGCAGACCAGCTTGTCGAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAACGTTGGTGGCTTTTaGTCAGTTCCTCATGATGTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCNVGGF*SVPHDV
Trigger: GACATCATGAGGAACTGAGCAAAAGCCACCAACGTT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGACCTCGTTCAGTTTCTaGTCAATCAAAGCTCTATCC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVTSFSF*SIKALS
Trigger: GGATAGAGCTTTGATTGAGCAGAAACTGAACGAGGT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTTCTATCTTGGTTTTaGTCTCTTCCAGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVFLSWF*SLPAAS
Trigger: TGAGGCAGCTGGAAGAGAGCAAAACCAAGATAGAAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTGGTCTCTTCCAGCTaGCTTTGCAGATTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLVSSS*LCRFLG
Trigger: CCCCAAAAATCTGCAAAGGCAGCTGGAAGAGACCAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTGGTCTCTTCCAGCTaGCTTTGCAGATTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLVSSS*LCRFLG
Trigger: CCCCAAAAATCTGCAAAGGCAGCTGGAAGAGACCAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTCTCAAGTCCTCTGTaGCAAGAGAAGGCTTCACAA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFSSPL*QEKASQ
Trigger: TTGTGAAGCCTTCTCTTGGCACAGAGGACTTGAGAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATCTTCTCTAACCACTaGATCATTGCACTGGACTCT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVIFSNH*IIALDS
Trigger: AGAGTCCAGTGCAATGATGCAGTGGTTAGAGAAGAT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTGAGCAAGCCTTTTTaGCTCGTCTACCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLSKPF*LVYLLF
Trigger: AAACAGCAGGTAGACGAGGCAAAAAGGCTTGCTCAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGCATGCACGCCTTTTaGTTTCTCAGGGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERCMHAF*FLRVSA
Trigger: TGCAGAAACCCTGAGAAAGCAAAAGGCGTGCATGCA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCAAAAAGGTCTGCATaGACGCCTTTTGCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSKRSA*TPFAFS
Trigger: TGAGAAAGCAAAAGGCGTGCATGCAGACCTTTTTGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAACCAGTTCACATCTTaGTGCTTCACCTGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNNQFTS*CFTCKG
Trigger: ACCCTTGCAGGTGAAGCAGCAAGATGTGAACTGGTT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTTCCAGAAGTCTTTaGAGAAGCTTCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSSRSL*RSFCSC
Trigger: ACAGGAACAGAAGCTTCTGCAAAGACTTCTGGAAGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGTAGAGGGTGTCGGCTaGCACATACTTTTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNVEGVG*HILFLD
Trigger: ATCCAAGAAAAGTATGTGGCAGCCGACACCCTCTAC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTTGCAAGCATCTGCTaGCCCCTCAGCATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELASIC*PLSIRL
Trigger: GAGCCTGATGCTGAGGGGGCAGCAGATGCTTGCAAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTCTCTACCAGGCGCTaGACCACCTTTTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELSTRR*TTFSHR
Trigger: TCGGTGGGAAAAGGTGGTGCAGCGCCTGGTAGAGAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTTCAGGTTGTCATCTaGCAGGGAGGTTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLQVVI*QGGFLL
Trigger: AAGGAGAAAACCTCCCTGGCAGATGACAACCTGAAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGTCGGACGCGTCGCTaGCTCGGCGGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSRTRR*LGGCWL
Trigger: GAGCCAGCAGCCGCCGAGGCAGCGACGCGTCCGACT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGGGAGTTGACATTTTaGTGTTTGCCAACCATGGTT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRELTF*CLPTMV
Trigger: AACCATGGTTGGCAAACAGCAAAATGTCAACTCCCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TCGCTATGCAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTTGCTTTTCCTTCAGCTaGTTCTCGGCCACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SLCRGHHCLQVAISSLTGCFSFS*FSATCF
Trigger: GAAGCAGGTGGCCGAGAAGCAGCTGAAGGAAAAGCA...ACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTGCATAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp GGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTGTTGTTTGGTTCAGCTaGCTGCCAAGGTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GSGALLHVPLDPSPVVLCVVWFS*LPRSLS
Trigger: GCTCAGAGACCTTGGCAGGCAGCTGAACCAAACAAC...ACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp GGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTGTCCACCAGATGTTCTaGACCCTTCCAGCATCCATC +
Preference number: 4 (lower is better)
Translates to: GSGALLHVPLDPSPVVLCVHQMF*TLPASI
Trigger: GATGGATGCTGGAAGGGTGCAGAACATCTGGTGGAC...ACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCCACTGTGTCTGCATaGCCGCTCTGTACGCCTCGA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESTVSA*PLCTPR
Trigger: TCGAGGCGTACAGAGCGGCCATGCAGACACAGTGGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTGCTGCTCCACGCACTaGCACAGCTGTAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLECCSTH*HSCRIQ
Trigger: CTGGATCCTACAGCTGTGCCAGTGCGTGGAGCAGCA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGTTTGTGAATGCTGCTaGACCTGTCACAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERVCECC*TCHSCT
Trigger: AGTACAGCTGTGACAGGTCCAGCAGCATTCACAAAC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTCAGTGGTAAGTTCTaGATGGCTGCTTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVFSGKF*MAASFC
Trigger: ACAGAAAGAAGCAGCCATCCAGAACTTACCACTGAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTTTGCAGATTTTTaGGGTCCAAAGCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNAFADF*GPKQWA
Trigger: AGCCCATTGCTTTGGACCCCAAAAATCTGCAAAGGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTAACTGGGCCTCTGTaGTCTGGAACTGGGTTAGAT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLTGPL*SGTGLD
Trigger: ATCTAACCCAGTTCCAGACCACAGAGGCCCAGTTAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCTGCTCTTCTTTCTTaGCGTCAAGCCATGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSALLS*RQAMLG
Trigger: TCCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTGCTCTTCTTTCTTaGCGTCAAGCCATGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSALLS*RQAMLG
Trigger: TCCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCCCAGTCTGTTTTCATaGTGTTCAGCTGCAACTGTA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCPSLFS*CSAATV
Trigger: TACAGTTGCAGCTGAACACCATGAAAACAGACTGGG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAACTCTCTGATTCAGTaGGATCCAGGGAGAACGTCA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERNSLIQ*DPGRTS
Trigger: TGACGTTCTCCCTGGATCCCACTGAATCAGAGAGTT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAACTCTCTGATTCAGTaGGATCCAGGGAGAACGTCA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNNSLIQ*DPGRTS
Trigger: TGACGTTCTCCCTGGATCCCACTGAATCAGAGAGTT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCCAGCATACCAAAGTaGTGGTCCATTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSSIPK*WSISFC
Trigger: GCAGAAGGAAATGGACCACCACTTTGGTATGCTGGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAAGTGGCCGAGACCCTaGAGCTTGGTTTCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERKWPRP*SLVSKK
Trigger: TTTCTTAGAAACCAAGCTCCAGGGTCTCGGCCACTT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTTCCAGCTTCTCGGTaGCTCCATCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELPASR*LHPPAP
Trigger: AGGAGCAGGTGGATGGAGCCACCGAGAAGCTGGAAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCCAGTTCAATCTCAATaGCTTTCGGGTCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERPVQSQ*LSGLLQ
Trigger: TTGGAGGAGACCCGAAAGCCATTGAGATTGAACTGG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTATTCTGAGCTTGTACTaGAGGTTGCTTGCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCILSLY*RLLASS
Trigger: CGAAGAAGCAAGCAACCTCCAGTACAAGCTCAGAAT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGAGTTTGCTCAGCCTaGGTAAGCCAGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRVCSA*VSQLMK
Trigger: CTTCATCAACTGGCTTACCCAGGCTGAGCAAACTCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTGAAATACTTCAGGTaGGTTCCAGTCTTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLKYFR*VPVLSN
Trigger: GTTGGACAAGACTGGAACCCACCTGAAGTATTTCAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTGTGCTGGACCAGCTaGGCTTTGATTTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLCWTS*ALILSG
Trigger: TCCAGACAAAATCAAAGCCCAGCTGGTCCAGCACAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTGTGCTGGACCAGCTaGGCTTTGATTTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLCWTS*ALILSG
Trigger: TCCAGACAAAATCAAAGCCCAGCTGGTCCAGCACAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTACCTCTTCGATCTCCTaGGGGATAACTTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCTSSIS*GITSLS
Trigger: AGATAAGGAAGTTATCCCCCAGGAGATCGAAGAGGT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTGTCGAAATCGAAGTTaGCAAATTCCCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCCRNRS*QIPSAP
Trigger: AGGAGCTGAGGGAATTTGCCAACTTCGATTTCGACA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGACTCGACGCGGAAGTaGATCTGTTGGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEDSTRK*ICWGKL
Trigger: GAGCTTCCCCCAACAGATCCACTTCCGCGTCGAGTC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTGCGTGTTAAAGGATaGAGAATCTTGGGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLRVKG*RILGVL
Trigger: CAGCACACCCAAGATTCTCCATCCTTTAACACGCAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGGGGGCAGTTGTGCTCTTCTTTTaGATTTCACACTGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: QRTSLPAGSHLQPHGSGAVVLFF*ISHWSR
Trigger: TCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAAC...TGCCCCCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR CAA 72 bp TGGGAGGTGTGTGAACGCCATGGTACCGGCGGCTGCTaGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: WEVCERHGTGGC*RRFPVTLILSW
Trigger: CCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCATGGCGTTCACACACCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCCGGCCTGTATTTATaGATGATGGCATTGAATAGT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSGLYL*MMALNS
Trigger: ACTATTCAATGCCATCATTCATAAATACAGGCCGGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTGTTTGTCTTCGCAGCTaGCACTATCCCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: SRVGGTFARSFGSQSCGAVCLRS*HYPSEL
Trigger: GAGTTCAGAGGGATAGTGTCAGCTGCGAAGACAAAC...AGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTTGAGTGATTCCTaGTATCATGAGCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNALSDS*YHELGL
Trigger: CAGACCAAGCTCATGATATCAGGAATCACTCAAAGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCCTGAGTTTAAGCTTTaGGTGATTCCTGATATCATG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVPEFKL*VIPDIM
Trigger: CATGATATCAGGAATCACTCAAAGCTTAAACTCAGG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTTCTGTCAAGTTCTaGTCCAGCAAAGACGACTTG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSSVKF*SSKDDL
Trigger: CAAGTCGTCTTTGCTGGATCAGAACTTGACAGAAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCGAGATGTCGCTCCTaGTTTCTGGATGTATTCAAG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSRCRS*FLDVFK
Trigger: CTTGAATACATCCAGAAATCAGGAGCGACATCTCGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp ACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTAGGTCTTCCAGTTTGTaGATGCTGCTGGACCTGTCA +
Preference number: 4 (lower is better)
Translates to: TGRGHFCTFLWIPVLWCSRSSSL*MLLDLS
Trigger: TGACAGGTCCAGCAGCATTCACAAACTGGAAGACCT...AGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTGGGGATGGACGTCTTaGGTGGGTTGTCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEWGWTS*VGCQDS
Trigger: GGAATCCTGACAACCCACTCAAGACGTCCATCCCCA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTCCATTTAGCTCGATaGGAGTTGTTTGCCAAGACA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFHLAR*ELFAKT
Trigger: TGTCTTGGCAAACAACTCTCATCGAGCTAAATGGAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGAGTGAGTACACTCTaGTACTGTTGCTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCRVSTL*YCCSIL
Trigger: CAGAATTGAGCAACAGTATCAGAGTGTACTCACTCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCACTTATATCCGAGCCTaGGAATATCTGGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERTYIRA*EYLGFL
Trigger: CAGGAATCCCAGATATTCTCAGGCTCGGATATAAGT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CCATCTCCAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTGGTTTCGTAGAGTTTaGCAAGGGCTTCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PSPASRVGGTFARSFGSQWFRRV*QGLLQL
Trigger: AAGCTGCAGAAGCCCTTGTCAAACTCTACGAAACCA...CTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTGGAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCAACAGTCATTTTCTaGCCGGAGTTGCAATCGATG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSTVIF*PELQSM
Trigger: CATCGATTGCAACTCCGGTCAGAAAATGACTGTTGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCTAGATGGACTTTCTaGGCCTTTCTGAACAACTGT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSRWTF*AFLNNC
Trigger: ACAGTTGTTCAGAAAGGCTCAGAAAGTCCATCTAGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTTCCAGGTCCCTGCTaGTCCCTGTCACTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELPGPC*SLSLPV
Trigger: TACAGGAAGTGACAGGGATCAGCAGGGACCTGGAAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGAGTTTAGTGGCACTTaGCCTGGCTTGACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEEFSGT*PGLTRE
Trigger: CTCCCTGGTCAAGCCAGGTCAAGTGCCACTAAACTC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTGTTGTTTGCTTTGTaGATTTCTGGTGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLLFAL*ISGAFR
Trigger: TCTGAAAGCACCAGAAATTCACAAAGCAAACAACAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCACTGCTCACTTCATTaGGAGAATCCACTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNHCSLH*ENPLRL
Trigger: AAGCCTTAGTGGATTCTCTCAATGAAGTGAGCAGTG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCCCGGATGAAATCTTaGGTGTCTTTGATGGTAACG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSRMKS*VSLMVT
Trigger: CGTTACCATCAAAGACACTCAAGATTTCATCCGGGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCCCGGATGAAATCTTaGGTGTCTTTGATGGTAACG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSRMKS*VSLMVT
Trigger: CGTTACCATCAAAGACACTCAAGATTTCATCCGGGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTTCACTCGACTCGATaGGATCATTTCCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLHSTR*DHFLLC
Trigger: ACAAAGCAGGAAATGATCTCATCGAGTCGAGTGAAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCATCTTGTTTCTGACTaGAATACTTCAGGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCHLVSD*NTSGGF
Trigger: GAACCCACCTGAAGTATTTCAGTCAGAAACAAGATG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACATGTTTGCCTCCGAGTaGTTTCTGAAACTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNMFASE*FLKLLV
Trigger: CACAAGGAGTTTCAGAAATCACTCGGAGGCAAACAT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCATGTTTGCCTCCGAGTaGTTTCTGAAACTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERMFASE*FLKLLV
Trigger: CACAAGGAGTTTCAGAAATCACTCGGAGGCAAACAT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTCTGGAAGACCTTGTaGTTATCGATCAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFWKTL*LSIRFI
Trigger: GATGAACCTGATCGATAATCACAAGGTCTTCCAGAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTTCCAGTCTCTTCATaGACTCTTTATGTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLPVSS*TLYVAQ
Trigger: TTGAGCAACATAAAGAGTTCATGAAGAGACTGGAAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGGTCATTTCTTCCATaGAGGTCTGGTGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERWSFLP*RSGVLQ
Trigger: TTGCAGAACACCAGACCTTCATGGAAGAAATGACCA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGACGGTCTCCACGTCTaGGCACACAGACTGGATTTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEDGLHV*AHRLDF
Trigger: GAAATCCAGTCTGTGTGCTCAGACGTGGAGACCGTC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGATTCAGAGAAAGAGCTCCATGGTGCCCCAGTCTTGTCTCCCTGGGACAGGTGAGGAGCCGGAGATGCTaGGCCAGATTTCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RFRERAPWCPSLVSLGQVRSRRC*ARFLAE
Trigger: TTCAGCCAGAAATCTGGCTCAGCATCTCCGGCTCCT...CACCTGTCCCAGGGAGACAAGACTGGGGCACCATGGAGCTCTTTCTCTGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGTACATCAATCACATaGTGGCGTAAAAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVCTSIT*WRKRFS
Trigger: TGAGAACCTTTTACGCCAGCATGTGATTGATGTACA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTCATCACGCAGCTTTaGAACCCTCTGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELITQL*NPLHQL
Trigger: CAGCTGGTGCAGAGGGTTGCAAAGCTGCGTGATGAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCAGCATGCGTCCTTTaGTGTACACCGAAGAACATT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSACVL*CTPKNI
Trigger: AATGTTCTTCGGTGTACAGCAAAGGACGCATGCTGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCGATGAGAGTTGTTTaGCAAGACACACTCATCGTC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSMRVV*QDTLIV
Trigger: GACGATGAGTGTGTCTTGGCAAACAACTCTCATCGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCTGCCTTTTCTTTGTaGCAGTCAAAGTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSAFSL*QSKSRS
Trigger: GGACCTTGACTTTGACTGGCACAAAGAAAAGGCAGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTGCCTTTTCTTTGTaGCAGTCAAAGTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSAFSL*QSKSRS
Trigger: GGACCTTGACTTTGACTGGCACAAAGAAAAGGCAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGACACTCGTCCATTTTaGTCTGCTTCACCTCTATTT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCDTRPF*SASPLF
Trigger: AAATAGAGGTGAAGCAGAGCAAAATGGACGAGTGTC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTGATGTGTTGTCATTaGGGGAACCACCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELMCCH*GNHPQG
Trigger: TCCCTGGGGGTGGTTCCCGCAATGACAACACATCAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTACCTCGTTCAGTTTCTaGTCAATCAAAGCTCTATCC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCTSFSF*SIKALS
Trigger: GGATAGAGCTTTGATTGAGCAGAAACTGAACGAGGT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTCGTGGCCTCACTGTaGCCTTCAGCATCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEFVASL*PSASVS
Trigger: GGAGACAGATGCTGAAGGGCACAGTGAGGCCACGAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGGTTCGCCAGTTCTTaGTCGGACTGCTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLERFASS*SDCCSQ
Trigger: CTGGCTACAGCAGTCCGAGCAAGAACTGGCGAACCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTTGATATCTGTCCTTaGAAAGCCTTGGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLDICP*KALVSS
Trigger: GGAAGAGACCAAGGCTTTGCAAGGACAGATATCAAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTTTCAGGAGGCTGTaGAAAGCTTCGAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSFRRL*KASRSF
Trigger: GAAAGATCTCGAAGCTTTGCACAGCCTCCTGAAAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTCTCAAGTCCTCTGTaGCAAGAGAAGGCTTCACAA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFSSPL*QEKASQ
Trigger: TTGTGAAGCCTTCTCTTGGCACAGAGGACTTGAGAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTATCTTCTCTAACCACTaGATCATTGCACTGGACTCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCIFSNH*IIALDS
Trigger: AGAGTCCAGTGCAATGATGCAGTGGTTAGAGAAGAT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAACTGGTTGAGCTCTTaGCACTTAGTGTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNNWLSS*HLVSIS
Trigger: AGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAACTGGTTGAGCTCTTaGCACTTAGTGTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERNWLSS*HLVSIS
Trigger: AGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGAATCTGGACCTGCTaGTTCTGTGTGTTCAACATG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNRIWTC*FCVFNM
Trigger: CATGTTGAACACACAGAAGCAGCAGGTCCAGATTCT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTGTCTGCTCAGTTCTaGTTTCAAGTACTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLSAQF*FQVLLF
Trigger: AAAGAGGAGTACTTGAAAGCAGAACTGAGCAGACAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGGGGGAGAGTCCCTCTaGTCTTCTTTCTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEGGESL*SSFLAS
Trigger: TGACGCCAAGAAAGAAGAGCAGAGGGACTCTCCCCC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCTGTCCGCAGGCTCTaGCGAAGCAGCGATTTTCTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESVRRL*RSSDFL
Trigger: GAGAAAATCGCTGCTTCGGCAGAGCCTGCGGACAGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTATTTTCACCAATCTaGTCCTTGATCTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLFSPI*SLIFST
Trigger: GGTGGAGAAGATCAAGGAGCAGATTGGTGAAAATAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTTCAGCAACAGTTCTaGTTGATGGTTCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLQQQF*LMVQPF
Trigger: GAAAGGCTGAACCATCAAGCAGAACTGTTGCTGAAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTTCAGCAACAGTTCTaGTTGATGGTTCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLQQQF*LMVQPF
Trigger: GAAAGGCTGAACCATCAAGCAGAACTGTTGCTGAAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGACTGTGTGCTTGTCTaGCTCCTCTGTTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNDCVLV*LLCYFL
Trigger: AAGAAAGTAACAGAGGAGGCAGACAAGCACACAGTC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATGAACTCTTTATGTTaGTCAATGAGAGTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVMNSLC*SMRVRR
Trigger: TCTCCGGACTCTCATTGAGCAACATAAAGAGTTCAT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGTCGGACGCGTCGCTaGCTCGGCGGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSRTRR*LGGCWL
Trigger: GAGCCAGCAGCCGCCGAGGCAGCGACGCGTCCGACT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAAGACTTGTCTAATTTaGTGGCAGGTGACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNKTCLI*WQVTSS
Trigger: AGAGGAGGTCACCTGCCAGCAAATTAGACAAGTCTT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TCGCTATGCAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTTTGTTCAGCAAGCCCTaGTGCACAGCCATTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLCRGHHCLQVAISSLTGLFSKP*CTAISG
Trigger: TCCAGAAATGGCTGTGCAGCAGGGCTTGCTGAACAA...ACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTGCATAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGACATCAATCACATGCTaGCGTAAAAGGTTCTCACAT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVTSITC*RKRFSH
Trigger: ATGTGAGAACCTTTTACGCCAGCATGTGATTGATGT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGATGGTCAAGCGGGCTaGGTGGTTTTCCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEDGQAG*VVFQKQ
Trigger: CTGCTTCTGGAAAACCACCCAGCCCGCTTGACCATC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTTTCCATGGACTCCTaGACAAGGTCTTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFSMDS*TRSSSL
Trigger: CAAACTGGAAGACCTTGTCCAGGAGTCCATGGAAAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGGGGGCAAACTGCTTCTTTGTTTaGTGGGGGAACAGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: QRTSLPAGSHLQPHGSGANCFFV*WGNSKA
Trigger: TGCTTTACTGTTCCCCCACCAAACAAAGAAGCAGTT...TGCCCCCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTTGCTCAATTCTGTTaGCAAAGTCAACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVAQFC*QSQLLL
Trigger: AAGAAGCAGTTGACTTTGCCAACAGAATTGAGCAAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGAAATCAAGTTCTGTTaGAAAGCCTGTTGTAAGGTC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVEIKFC*KACCKV
Trigger: GACCTTACAACAGGCTTTCCAACAGAACTTGATTTC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCTCTGAGCTGTGACTaGCTCTTCGCCATCAGAACC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEALSCD*LFAIRT
Trigger: GGTTCTGATGGCGAAGAGCCAGTCACAGCTCAGAGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCAGAAGCATCTGACATaGATTCCTCACTGTGATAGT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCQKHLT*IPHCDS
Trigger: ACTATCACAGTGAGGAATCCATGTCAGATGCTTCTG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGTCACCAGCATCAATaGCTCCTTTATGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSHQHQ*LLYVTV
Trigger: CACTGTCACATAAAGGAGCCATTGATGCTGGTGACT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGTCACTTTAGAAGCTaGGGTGTCAAATATTTCTGC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSHFRS*GVKYFC
Trigger: GCAGAAATATTTGACACCCCAGCTTCTAAAGTGACT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACACTGCATCATTGCACTaGACTCTTCCTGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNTASLH*TLPEPF
Trigger: AAAAGGCTCAGGAAGAGTCCAGTGCAATGATGCAGT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCGTCAAGCCATGCTTaGAAATCCTTAGACATTTGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERASSHA*KSLDIC
Trigger: GCAAATGTCTAAGGATTTCCAAGCATGGCTTGACGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCCCAGTCTGTTTTCATaGTGTTCAGCTGCAACTGTA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNPSLFS*CSAATV
Trigger: TACAGTTGCAGCTGAACACCATGAAAACAGACTGGG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCCTTTGGGTGTCTCTaGAGACTTCCTGAAATTCTT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERAFGCL*RLPEIL
Trigger: AAGAATTTCAGGAAGTCTCCAGAGACACCCAAAGGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCGAGACCCTGGAGCTTaGTTTCTAAGAAAGAACACT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRDPGA*FLRKNT
Trigger: AGTGTTCTTTCTTAGAAACCAAGCTCCAGGGTCTCG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCATCTTATCTATGTGTaGCTTGTGCTCGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERHLIYV*LVLGYQ
Trigger: CTGATAGCCGAGCACAAGCCACACATAGATAAGATG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTGTCATGAAACTGGGTaGACTGAGAAATGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNCHETG*TEKWPH
Trigger: ATGAGGCCATTTCTCAGTCCACCCAGTTTCATGACA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCTTCGATTTCACCGTaGAACCCTTTGGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESSISP*NPLAWR
Trigger: GCGCCAGGCCAAAGGGTTCCACGGTGAAATCGAAGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTCCTTGGCTGTCTCTaGGAGACCTCCCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELLGCL*ETSQRF
Trigger: AAACCTCTGGGAGGTCTCCCAGAGACAGCCAAGGAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTGAAATACTTCAGGTaGGTTCCAGTCTTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLKYFR*VPVLSN
Trigger: GTTGGACAAGACTGGAACCCACCTGAAGTATTTCAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTTTGTCTGGATCGTTaGCGATTTCCAGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFCLDR*RFPAQN
Trigger: ATTCTGAGCTGGAAATCGCCAACGATCCAGACAAAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGGCTTTGATTTTGTCTaGATCGTTGGCGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNGFDFV*IVGDFQ
Trigger: CTGGAAATCGCCAACGATCCAGACAAAATCAAAGCC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGGCTTTGATTTTGTCTaGATCGTTGGCGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERGFDFV*IVGDFQ
Trigger: CTGGAAATCGCCAACGATCCAGACAAAATCAAAGCC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAACGTCCAGTTCGGTTaGTGGTATCGTAGACAGAAT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERNVQFG*WYRRQN
Trigger: ATTCTGTCTACGATACCACCAACCGAACTGGACGTT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAACGTCCAGTTCGGTTaGTGGTATCGTAGACAGAAT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNNVQFG*WYRRQN
Trigger: ATTCTGTCTACGATACCACCAACCGAACTGGACGTT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCACCTCTTCGATCTCCTaGGGGATAACTTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERTSSIS*GITSLS
Trigger: AGATAAGGAAGTTATCCCCCAGGAGATCGAAGAGGT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGACGAGGGAGGGTCAGTaGCCCTCCTCTTATAGGTCT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLETREGQ*PSSYRS
Trigger: AGACCTATAAGAGGAGGGCCACTGACCCTCCCTCGT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCAACTTGGAATCGCTTaGCACACTTACACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERQLGIA*HTYTWL
Trigger: TAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCGGAAGTGGATCTGTTaGGGGAAGCTCCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLERKWIC*GKLLWM
Trigger: CATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CCATCTCCAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTTTTGGATTTCACACTaGAGCCGAAGCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: PSPASRVGGTFARSFGSQFWISH*SRSNWC
Trigger: GCACCAGTTGCTTCGGCTCCAGTGTGAAATCCAAAA...CTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTGGAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp CAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGGGGGCACTATTTTCCATTGCCTaGAACACTGACAGCGTCTTA +
Preference number: 4 (lower is better)
Translates to: QRTSLPAGSHLQPHGSGALFSIA*NTDSVL
Trigger: TAAGACGCTGTCAGTGTTCCAGGCAATGGAAAATAG...TGCCCCCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTCCGAACCTTCATaGGATGCTGATTTATCCATT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNASEPS*DADLSI
Trigger: AATGGATAAATCAGCATCTCATGAAGGTTCGGAAGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAAGAGTTTAGCGTACTaGCTCTCTAATCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNKSLAY*LSNLCN
Trigger: GTTGCACAGATTAGAGAGTCAGTACGCTAAACTCTT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAAGAGTTTAGCGTACTaGCTCTCTAATCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERKSLAY*LSNLCN
Trigger: GTTGCACAGATTAGAGAGTCAGTACGCTAAACTCTT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTTCTTTGGCATCATTaGAAAACTCGAAATAGGCAG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLLWHH*KTRNRQ
Trigger: CTGCCTATTTCGAGTTTTTCAATGATGCCAAAGAAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTCCATTTAGCTCGATaGGAGTTGTTTGCCAAGACA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFHLAR*ELFAKT
Trigger: TGTCTTGGCAAACAACTCTCATCGAGCTAAATGGAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTCCATTTAGCTCGATaGGAGTTGTTTGCCAAGACA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNFHLAR*ELFAKT
Trigger: TGTCTTGGCAAACAACTCTCATCGAGCTAAATGGAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGAGTGAGTACACTCTaGTACTGTTGCTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRVSTL*YCCSIL
Trigger: CAGAATTGAGCAACAGTATCAGAGTGTACTCACTCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTCTGTCGATTTCATTaGCTAGATAGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNFCRFH*LDSARR
Trigger: TCTCCTGGCACTATCTAGTCAATGAAATCGACAGAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGGGGGCACTTCACACTTATTTGTaGTCGTTCCCAAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: QRTSLPAGSHLQPHGSGALHTYL*SFPSHL
Trigger: AAGATGACTTGGGAACGATCACAAATAAGTGTGAAG...TGCCCCCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTTCCTCAACATTTaGCAGCCAGTTCAAAAGATT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCVFLNI*QPVQKI
Trigger: AATCTTTTGAACTGGCTGTCAAATGTTGAGGAAGAC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTGTTGTTTGCTTTGTaGATTTCTGGTGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLLFAL*ISGAFR
Trigger: TCTGAAAGCACCAGAAATTCACAAAGCAAACAACAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTTGCCAAGAAATCCTaGGTATTTGTGTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFAKKS*VFVSVP
Trigger: AGGAACAGACACAAATACTCAGGATTTCTTGGCAAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGTGAGCTGTTCATACTaGGGTTTCCGGGTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEVSCSY*GFRVSN
Trigger: GTTCGACACCCGGAAACCTCAGTATGAACAGCTCAC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCTCTGGAGACTTCCTaGAATTCTTTAAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSLETS*NSLNFW
Trigger: CCAGAAGTTTAAAGAATTTCAGGAAGTCTCCAGAGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCAGCTTTTTCTTCATTaGCTGCTTCTCCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNQLFLH*LLLLFT
Trigger: AGTGAAGAGGAGAAGCAGTCAATGAAGAAAAAGCTG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCGTCAATCTCCTCTCTaGTTGCCTCTGCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLERQSPL*LPLQLP
Trigger: AGGAAGCTGCAGAGGCAATCAGAGAGGAGATTGACG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCATCTTGTTTCTGACTaGAATACTTCAGGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERHLVSD*NTSGGF
Trigger: GAACCCACCTGAAGTATTTCAGTCAGAAACAAGATG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACATCCAGAGATTTTTCTaGCTCTTCCAGCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNIQRFF*LFQPFH
Trigger: ATGGAATGGCTGGAAGAGTCAGAAAAATCTCTGGAT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTCTGGAAGACCTTGTaGTTATCGATCAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNFWKTL*LSIRFI
Trigger: GATGAACCTGATCGATAATCACAAGGTCTTCCAGAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTTCCAGTCTCTTCATaGACTCTTTATGTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLPVSS*TLYVAQ
Trigger: TTGAGCAACATAAAGAGTTCATGAAGAGACTGGAAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGCTTTACAGGGAGTTaGCATTTTGCTGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERCFTGS*HFAVCQ
Trigger: TTGGCAAACAGCAAAATGTCAACTCCCTGTAAAGCA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATGCCTGCCAAGGTCTCTaGGCTGCTGGGAATAGCGTT +
Preference number: 4 (lower is better)
Translates to: QRFELVTQFLGCTFSRHHACQGL*AAGNSV
Trigger: AACGCTATTCCCAGCAGCTCAGAGACCTTGGCAGGC...ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGGGAGATCAAATTGTaGCCGTCCCTCAGATCCTCG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEREIKL*PSLRSS
Trigger: CGAGGATCTGAGGGACGGGCACAATTTGATCTCCCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACATGGCTTTTGCTTTCTaGAACTCGTCTTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNMAFAF*NSSSNA
Trigger: TGCATTGGAAGACGAGTTGCAGAAAGCAAAAGCCAT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp ACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTTTCGACAAGCTGGTCTaGCTTTTCTTTGTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: TGRGHFCTFLWIPVLWCSFDKLV*LFFVPV
Trigger: GACTGGCACAAAGAAAAGGCAGACCAGCTTGTCGAA...AGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATCCTGGTATTTTCCTaGAAAATACTCCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVILVFS*KILLCT
Trigger: GGTACAAAGGAGTATTTTGCAGGAAAATACCAGGAT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGCTTTCCAGAAGCATaGCCACGGCCTCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESFPEA*PRPHPS
Trigger: ACTTGGATGAGGCCGTGGGCATGCTTCTGGAAAGCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGGTGTCAAATATTTCTaGAAGAGTCTCAAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERGVKYF*KSLKQD
Trigger: GTCCTGCTTGAGACTCTTGCAGAAATATTTGACACC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTGGTCTTTTTCAGTTaGATACCCATCAAACAGCAG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLVFFS*IPIKQQ
Trigger: CTGCTGTTTGATGGGTATGCAACTGAAAAAGACCAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTCACCTCCTGGCAGTaGTGCTATGTGCACACTGAA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELTSWQ*CYVHTE
Trigger: TTCAGTGTGCACATAGCAGCACTGCCAGGAGGTGAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGGGAGACAGATCTTGTaGATAATCAGAGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNGRQIL*IIRDEG
Trigger: TCCTTCATCTCTGATTATGCACAAGATCTGTCTCCC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTGTGTACTTCCTTaGATATCTCTCTGTAATTCC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNACVLP*ISLCNS
Trigger: GGAATTACAGAGAGATATGCAAGGAAGTACACAGGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCCTGTGTACTTCCTTaGATATCTCTCTGTAATTCC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERACVLP*ISLCNS
Trigger: GGAATTACAGAGAGATATGCAAGGAAGTACACAGGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTCACAACGGGAACCTaGTTGGTTGTCTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFTTGT*LVVSFI
Trigger: GATAAAAGAGACAACCAAGCAGGTTCCCGTTGTGAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCAAATGACTTGTTCTaGTCCACCTGCAACTTCACA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSNDLF*STCNFT
Trigger: TGTGAAGTTGCAGGTGGAGCAGAACAAGTCATTTGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCAAATGACTTGTTCTaGTCCACCTGCAACTTCACA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSNDLF*STCNFT
Trigger: TGTGAAGTTGCAGGTGGAGCAGAACAAGTCATTTGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTGCCAAAGTCTTTCTaGGAGTTAAGTAACGACTCC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLPKSF*ELSNDS
Trigger: GGAGTCGTTACTTAACTCGCAGAAAGACTTTGGCAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGGTCCAGCAGCTTGTTaGACTGCTTGCTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEGPAAC*TACSRL
Trigger: AAGCCTTGAGCAAGCAGTGCAACAAGCTGCTGGACC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCAGGTGTTTGCAGCTaGGCTCTGAATAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEAGVCS*ALNKAL
Trigger: CAAGGCCTTATTCAGAGCGCAGCTGCAAACACCTGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTTCCAGAAGTCTTTaGAGAAGCTTCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSSRSL*RSFCSC
Trigger: ACAGGAACAGAAGCTTCTGCAAAGACTTCTGGAAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTTTTCTTCATTGACTaGTTCTCCTCTTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVFFFID*FSSSLD
Trigger: ATCCAGTGAAGAGGAGAAGCAGTCAATGAAGAAAAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTTCTGACTTAAATTaGTTCAGCTCTTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCASDLN*FSSSIC
Trigger: GCAGATTGAAGAGCTGAAGCAATTTAAGTCAGAAGC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGATGAGATCATTTCCTaGTTTGTTGACGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNDEIIS*FVDGFY
Trigger: GTAGAAGCCGTCAACAAAGCAGGAAATGATCTCATC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp ACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTTCCAACTCGACCTTCTaGTTTTCCTTCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TGRGHFCTFLWIPVLWCSSNSTF*FSFSCF
Trigger: GAAGCAGCTGAAGGAAAAGCAGAAGGTCGAGTTGGA...AGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTACATCAATCACATGCTaGCGTAAAAGGTTCTCACAT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCTSITC*RKRFSH
Trigger: ATGTGAGAACCTTTTACGCCAGCATGTGATTGATGT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGGGGGCAACATCAATCACATGCTaGCGTAAAAGGTTCTCACAT +
Preference number: 4 (lower is better)
Translates to: QRTSLPAGSHLQPHGSGATSITC*RKRFSH
Trigger: ATGTGAGAACCTTTTACGCCAGCATGTGATTGATGT...TGCCCCCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGTACTTGCGCTGGATaGCATCTTTCAGATTCCTTA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERCTCAG*HLSDSL
Trigger: TAAGGAATCTGAAAGATGCCATCCAGCGCAAGTACA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTGTACTTGCGCTGGATaGCATCTTTCAGATTCCTTA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNCTCAG*HLSDSL
Trigger: TAAGGAATCTGAAAGATGCCATCCAGCGCAAGTACA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp ACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTTTGTGAATGCTGCTaGACCTGTCACAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: TGRGHFCTFLWIPVLWCSVCECC*TCHSCT
Trigger: AGTACAGCTGTGACAGGTCCAGCAGCATTCACAAAC...AGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGAACTGCTCCTTCTTaGTTGATATTTCTTTACTGG +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRTAPS*LIFLYW
Trigger: CCAGTAAAGAAATATCAACCAAGAAGGAGCAGTTCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCAGAAGCATCTGACATaGATTCCTCACTGTGATAGT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERQKHLT*IPHCDS
Trigger: ACTATCACAGTGAGGAATCCATGTCAGATGCTTCTG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGACCAGTCTCTTTCTCTaGTCCTCCAGTGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLETSLFL*SSSEGV
Trigger: GACTCCCTCACTGGAGGACCAGAGAAAGAGACTGGT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGATCACAGTCCATCTaGGTTAATACTTTAGCTAAC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCGSQSI*VNTLAN
Trigger: GTTAGCTAAAGTATTAACCCAGATGGACTGTGATCC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACACTGTTGCAAGCCATTaGAACATTTTTCCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNTVASH*NIFPSS
Trigger: GCTCGAAGGAAAAATGTTCCAATGGCTTGCAACAGT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCACCTTTTCGTTCATaGCATTTATGCTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSPFRS*HLCCFD
Trigger: GTCAAAGCAGCATAAATGCCATGAACGAAAAGGTGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGCTTTGTGAATTTCTaGTGCTTTCAGATTCCACTT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVCFVNF*CFQIPL
Trigger: AAGTGGAATCTGAAAGCACCAGAAATTCACAAAGCA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTGCTCCACGCTTCATaGAACTGCTTGGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELLHAS*NCLALF
Trigger: GAAGAGGGCCAAGCAGTTCCATGAAGCGTGGAGCAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTTTGTCTGGATCGTTaGCGATTTCCAGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFCLDR*RFPAQN
Trigger: ATTCTGAGCTGGAAATCGCCAACGATCCAGACAAAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGCCTCGGCGGCTGCTaGCTCTGCTTCCGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDCLGGC*LCFRLC
Trigger: GCAAAGCCGGAAGCAGAGCCAGCAGCCGCCGAGGCA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATAGGAGCTCCTCCTCGTaGTCCCGCTTTCGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: QRFELVTQFLGCTFSRHHRSSSS*SRFRCS
Trigger: ACTGCAACGAAAGCGGGACCACGAGGAGGAGCTCCT...ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp GGATCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCATCTCTGCAGGGTGGTaGCACTCTCTCCCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: GSLLWPPSCFRSMTNKQTISAGW*HSLPAV
Trigger: TACGGCAGGGAGAGAGTGCCACCACCCTGCAGAGAT...GGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCCGGCCTGTATTTATaGATGATGGCATTGAATAGT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSGLYL*MMALNS
Trigger: ACTATTCAATGCCATCATTCATAAATACAGGCCGGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATTGGGGATGGACGTCTTaGGTGGGTTGTCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: QRFELVTQFLGCTFSRHHWGWTS*VGCQDS
Trigger: GGAATCCTGACAACCCACTCAAGACGTCCATCCCCA...ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTACTCATGCCAGAGAGTaGGTACACTCTGATACTGTT +
Preference number: 4 (lower is better)
Translates to: SRVGGTFARSFGSQSCGATHARE*VHSDTV
Trigger: AACAGTATCAGAGTGTACTCACTCTCTGGCATGAGT...AGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTTCACACTTATTTGTaGTCGTTCCCAAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLHTYL*SFPSHL
Trigger: AAGATGACTTGGGAACGATCACAAATAAGTGTGAAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTTCACACTTATTTGTaGTCGTTCCCAAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLHTYL*SFPSHL
Trigger: AAGATGACTTGGGAACGATCACAAATAAGTGTGAAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TCGCTATGCAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTTGCTCTGAGTATTTCTaGCACTCGTCCATTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SLCRGHHCLQVAISSLTGCSEYF*HSSILL
Trigger: GAGCAAAATGGACGAGTGTCAGAAATACTCAGAGCA...ACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTGCATAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTCAGCAGAAGCATCTaGCATGGATTCCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELSRSI*HGFLTV
Trigger: CACAGTGAGGAATCCATGTCAGATGCTTCTGCTGAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTTGCCAAGAAATCCTaGGTATTTGTGTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFAKKS*VFVSVP
Trigger: AGGAACAGACACAAATACTCAGGATTTCTTGGCAAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGGGGCCGAGCACGCTaGCCATCAGCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRGRAR*PSAPSP
Trigger: TGGAGAAGGAGCTGATGGTCAGCGTGCTCGGCCCCT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCTCTGGAGACTTCCTaGAATTCTTTAAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSLETS*NSLNFW
Trigger: CCAGAAGTTTAAAGAATTTCAGGAAGTCTCCAGAGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCCAACTTATCTTGAATaGTTAAGACTTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCPTYLE*LRLHHL
Trigger: CAGGTGATGAAGTCTTAATCATTCAAGATAAGTTGG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCATTTCCTGCTTTGTTaGCGGCTTCTACCGTGGACT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEHFLLC*RLLPWT
Trigger: AGTCCACGGTAGAAGCCGTCAACAAAGCAGGAAATG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGCTGCTGCTTTCTTTaGTCTGTCTTTTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSCCFL*SVFSKI
Trigger: TATTTTGGAAAAGACAGATCAAAGAAAGCAGCAGCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTGTGCTCATCAATTTaGAACAAGATGGTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLCSSI*NKMVSK
Trigger: CTTGGACACCATCTTGTTTCAAATTGATGAGCACAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTTCCAGTCTCTTCATaGACTCTTTATGTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLPVSS*TLYVAQ
Trigger: TTGAGCAACATAAAGAGTTCATGAAGAGACTGGAAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTAAATTTGCAAGGTTaGTTTGAACAGCAACAGTAT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLNLQG*FEQQQY
Trigger: ATACTGTTGCTGTTCAAAGCAACCTTGCAAATTTAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGTACATCAATCACATaGTGGCGTAAAAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERCTSIT*WRKRFS
Trigger: TGAGAACCTTTTACGCCAGCATGTGATTGATGTACA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATCTCATCACGCAGCTTTaGAACCCTCTGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: QRFELVTQFLGCTFSRHHLITQL*NPLHQL
Trigger: CAGCTGGTGCAGAGGGTTGCAAAGCTGCGTGATGAG...ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp GGATCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCGTTCCGTGGTCAGCATaGGTCCTTTGCTGTACACCG +
Preference number: 4 (lower is better)
Translates to: GSLLWPPSCFRSMTNKQTVPWSA*VLCCTP
Trigger: CGGTGTACAGCAAAGGACGCATGCTGACCACGGAAC...GGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TCGCTATGCAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTTCGATGAGAGTTGTTTaGCAAGACACACTCATCGTC +
Preference number: 4 (lower is better)
Translates to: SLCRGHHCLQVAISSLTGSMRVV*QDTLIV
Trigger: GACGATGAGTGTGTCTTGGCAAACAACTCTCATCGA...ACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTGCATAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp CAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTCGGGGGCACTTGATAATACTTCCTaGACACACTCACTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: QRTSLPAGSHLQPHGSGALDNTS*THSLPF
Trigger: AAAAGGAAGTGAGTGTGTGCAGGAAGTATTATCAAG...TGCCCCCGACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTTACACAGATTCCTCTTaGTCCTCTCTTTCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SRVGGTFARSFGSQSCGAYTDSS*SSLSAD
Trigger: GTCTGCAGAAAGAGAGGAGCAAGAGGAATCTGTGTA...AGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCAGGGCCAGGGCTTTaGTGTTTTCTGGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEAGPGL*CFLADF
Trigger: AAAATCAGCCAGAAAACAGCAAAGCCCTGGCCCTGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTACTGGACATCTGTTaGTTAGAGAAGAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLLDIC*LEKRGF
Trigger: GAAACCTCTCTTCTCTAAGCAACAGATGTCCAGTAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGAGCTTCTGAGAACTaGTCCTTCTTGGTTGATATT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRASEN*SFLVDI
Trigger: AATATCAACCAAGAAGGAGCAGTTCTCAGAAGCTCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGTGAGGATGCTGCTTaGGGTGTCTCTGTCAATCAC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESEDAA*GVSVNH
Trigger: GTGATTGACAGAGACACCGCAAGCAGCATCCTCACT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCATTTCAGAGTTGATTaGAAGCTTGATCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVHFRVD*KLDQFH
Trigger: ATGAAACTGATCAAGCTTGCAATCAACTCTGAAATG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCCCCACCGGGGCCATaGCGTCCAGCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSPPGP*RPAHHH
Trigger: GTGATGATGAGCTGGACGGCATGGCCCCGGTGGGGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTTTTCTTCATTGACTaGTTCTCCTCTTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFFFID*FSSSLD
Trigger: ATCCAGTGAAGAGGAGAAGCAGTCAATGAAGAAAAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTTCTTGGATATAAATaGCTTCCTTTGGGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFLGYK*LPLGSV
Trigger: AACTGAGCCCAAAGGAAGGCATTTATATCCAAGAAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTATTTTCACCAATCTaGTCCTTGATCTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLFSPI*SLIFST
Trigger: GGTGGAGAAGATCAAGGAGCAGATTGGTGAAAATAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGCTCTTCAATCTGCTaGTTGACGGTCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESSSIC*LTVSRS
Trigger: AGACCTGGAGACCGTCAAGCAGCAGATTGAAGAGCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTCAGCTCTTCAATCTaGTGCTTGACGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEFSSSI*CLTVSR
Trigger: CCTGGAGACCGTCAAGCAGCAGATTGAAGAGCTGAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTCTGACTTAAATTaGTTCAGCTCTTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNASDLN*FSSSIC
Trigger: GCAGATTGAAGAGCTGAAGCAATTTAAGTCAGAAGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGGTGTGTGTCAGCCATaGGAGGAGCTCGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDGVCQP*EELVQG
Trigger: GCCCTGGACGAGCTCCTCGCATGGCTGACACACACC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAAGTTCATGGCCAAGTaGAGGGCCTCCTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEKFMAK*RASSNF
Trigger: AAAGTTGGAGGAGGCCCTGCACTTGGCCATGAACTT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCAGGGCCTGCACGCTaGTGGTCCTCTTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSGPAR*WSSSPA
Trigger: AGCTGGGGAAGAGGACCAGCAGCGTGCAGGCCCTGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACATGAACTCTTTATGTTaGTCAATGAGAGTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNMNSLC*SMRVRR
Trigger: TCTCCGGACTCTCATTGAGCAACATAAAGAGTTCAT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTTTGCTTCCGGCTCTaGTCCCTGGGCGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLCFRL*SLGGWE
Trigger: CTCCCAGCCGCCCAGGGAGCAGAGCCGGAAGCAAAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGGCGGCTGCTGGCTCTaGTTCCGGCTTTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVGGCWL*FRLCFR
Trigger: CCGGAAGCAAAGCCGGAAGCAGAGCCAGCAGCCGCC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGTCGGACGCGTCGCTaGCTCGGCGGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSRTRR*LGGCWL
Trigger: GAGCCAGCAGCCGCCGAGGCAGCGACGCGTCCGACT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TCGCTATGCAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTTCCACGTTCCTCTGTTaGTTCCTCAGTTCATTTTCG +
Preference number: 4 (lower is better)
Translates to: SLCRGHHCLQVAISSLTGSTFLC*FLSSFS
Trigger: CGAAAATGAACTGAGGAAGCAACAGAGGAACGTGGA...ACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTGCATAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTGTCGTGACTTCTGTATaGATGCCACACTGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SRVGGTFARSFGSQSCGAVVTSV*MPHCLF
Trigger: GAACAAACAGTGTGGCATGCATACAGAAGTCACGAC...AGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp GGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTTCAGACCAAGCCGCAGCTaGTCAACTGTCCTCATGTCC +
Preference number: 4 (lower is better)
Translates to: GKAFMISLGSLLWPPSCFRPSRS*STVLMS
Trigger: GGACATGAGGACAGTTGAGCAGCTGCGGCTTGGTCT...GAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp ACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCGCCCTGAGTTCAGGCTaGGGTGTAAGGTTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: TGKAFMISLGSLLWPPSCALSSG*GVRFVQ
Trigger: TTGCACAAACCTTACACCCCAGCCTGAACTCAGGGC...GCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCAATGCTGCTCCACGCACTaGCACAGCTGTAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: SLLWPPSCFRSMTNKQTQCCSTH*HSCRIQ
Trigger: CTGGATCCTACAGCTGTGCCAGTGCGTGGAGCAGCA...TTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGAGCCTGAGAATATCTaGGATTCCTGGCTATCCTCC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEEPENI*DSWLSS
Trigger: GGAGGATAGCCAGGAATCCCAGATATTCTCAGGCTC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCATCAATGAGGCCGTaGCTTTCAGCATCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESSMRP*LSASLR
Trigger: CCTCAGAGATGCTGAAAGCCACGGCCTCATTGATGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCATGGTTGTTGTCATaGTTGTTGTGTGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESWLLS*LLCAEP
Trigger: GGGCTCCGCACACAACAACCATGACAACAACCATGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGTCACTTTAGAAGCTaGGGTGTCAAATATTTCTGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSHFRS*GVKYFC
Trigger: GCAGAAATATTTGACACCCCAGCTTCTAAAGTGACT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCACCTTTTCGTTCATaGCATTTATGCTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSPFRS*HLCCFD
Trigger: GTCAAAGCAGCATAAATGCCATGAACGAAAAGGTGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTGGTAAGCCATGGCTaGATATCTCTTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELVSHG*ISLSGG
Trigger: GCCTCCTGAAAGAGATATCCAGCCATGGCTTACCAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCAGGTGTAGGTGTCTaGCGCCACCTGCTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVAGVGV*RHLLAV
Trigger: GACGGCCAGCAGGTGGCGCCAGACACCTACACCTGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGCCACTGTTTTAACTaGGCCTCTGTGGTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESHCFN*ASVVWN
Trigger: GTTCCAGACCACAGAGGCCCAGTTAAAACAGTGGCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGAGACTGTCTTACTTTaGAGCTGCTCAGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEETVLL*SCSVTL
Trigger: CAGGGTCACTGAGCAGCTCCAAAGTAAGACAGTCTC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCACTTAGCAAGCCTTTaGTGTGTGTCAGCCATGCGA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEHLASL*CVSAMR
Trigger: TCGCATGGCTGACACACACCAAAGGCTTGCTAAGTG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGGAACCCTTTGGCCTaGCGCAAGGCGCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDWNPLA*RKALSS
Trigger: GCTGGACAGCGCCTTGCGCCAGGCCAAAGGGTTCCA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCGTCTGCTTTGATATaGAGAGTGCACACACGGTCT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEASALI*RVHTRS
Trigger: AGACCGTGTGTGCACTCTCCATATCAAAGCAGACGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGCATCCTCATCATCTaGGAGAGCACCATGGAAACG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESILII*ESTMET
Trigger: CGTTTCCATGGTGCTCTCCCAGATGATGAGGATGCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCCTGCTAACCTCTGCTaGTGCTGCTTCGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDPANLC*CCFAQA
Trigger: GGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGCAGG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCCGGCTCTGCTCCCTaGGCGGCTGGGAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSGSAP*AAGSLP
Trigger: AGGAAGACTCCCAGCCGCCCAGGGAGCAGAGCCGGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCTGAGCACACAGACTaGATTTCTGAAATGTCAAAG +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSEHTD*ISEMSK
Trigger: CTTTGACATTTCAGAAATCCAGTCTGTGTGCTCAGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTCGGCCACCTGCTTCTaGAAGGCCAGGTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: YKKLTALRVGDTVPRLHISATCF*KARSRS
Trigger: GGAGCGGGACCTGGCCTTCCAGAAGCAGGTGGCCGA...AATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp CAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATACTTCGCATCTCTGCTaGATGGCTTGCTTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: QRFELVTQFLGCTFSRHHTSHLC*MACFSR
Trigger: CCGCGAGAAGCAAGCCATCCAGCAGAGATGCGAAGT...ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp ACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTCCATCCACCAGCACTaGAACCCAGCCTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TGKAFMISLGSLLWPPSCSIHQH*NPASSL
Trigger: AAGAGAAGAGGCTGGGTTCCAGTGCTGGTGGATGGA...GCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp ACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTAAGAATAGTAGAGGTTaGATATCCCTGTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: TGRGHFCTFLWIPVLWCSKNSRG*ISLSPR
Trigger: CCTTGGGGACAGGGATATCCAACCTCTACTATTCTT...AGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp CCAACTATGGGACACGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTGCACGCAGACATGTCCTCTaGCTCTCCAGTGACATGGAT +
Preference number: 4 (lower is better)
Translates to: PTMGHGILQQTLSNRDLARRHVL*LSSDMD
Trigger: ATCCATGTCACTGGAGAGTCAGAGGACATGTCTGCG...TGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGTCCCATAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR TCA 90 bp CAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATAACACTTGGCAAATCTaGGCCCCATTCAGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: QRFELVTQFLGCTFSRHHNTWQI*APFSAV
Trigger: GACCGCACTGAATGGGGCTCAGATTTGCCAAGTGTT...ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTTTCCATTTAGCTCGATaGGAGTTGTTTGCCAAGACA +
Preference number: 4 (lower is better)
Translates to: SRVGGTFARSFGSQSCGAFHLAR*ELFAKT
Trigger: TGTCTTGGCAAACAACTCTCATCGAGCTAAATGGAA...AGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCACGCTGAGCTCTaGTCGGAGAGCGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTDHAEL*SESGDR
Trigger: TCTGTCCCCGCTCTCCGATCAGAGCTCAGCGTGGTC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCCTCTTAAAACTGCCTaGAAGACAGACAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEPLKTA*KTDRTS
Trigger: AGAGGTCCTGTCTGTCTTTCAGGCAGTTTTAAGAGG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTTTCTCTTGTGCTCTaGTCAGCCAACACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEFSLVL*SANTLW
Trigger: CCAGAGAGTGTTGGCTGATCAGAGCACAAGAGAAAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCCTGGAGATTCATATaGACTTTGTCTAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSWRFI*TLSKLL
Trigger: AAGCAGTTTAGACAAAGTTCATATGAATCTCCAGGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCATACTGCTGGTATTaGTCCACCAGGTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESYCWY*STRSLR
Trigger: CCTCAAAGACCTGGTGGATCAATACCAGCAGTATGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGCAACCTGCTGACTTaGTATCTGTCCTTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESNLLT*YLSLQS
Trigger: GCTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTTGCTCTCTGTACTTaGGGGCTTTTTCCAACGAGT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELALCT*GLFPTS
Trigger: ACTCGTTGGAAAAAGCCCTCAAGTACAGAGAGCAAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGAGCCACCTTCTTATTaGGAGTCTTCCACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEEPPSY*ESSTLS
Trigger: ACTCAAGGTGGAAGACTCTCAATAAGAAGGTGGCTC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCGTCAATGCTCTTCTTaGCAATGGGTTTGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLERQCSS*QWVCQA
Trigger: AGCCTGACAAACCCATTGTCAAGAAGAGCATTGACG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCCTGCATCTGGACCCTaGCCCAGGAGGAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDPASGP*PRRSHL
Trigger: GAGATGACTCCTCCTGGGTCAGGGTCCAGATGCAGG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGTGCCCTCTGCGGATaGCACGGGAAAGTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTCALCG*HGKVGA
Trigger: TGCCCCGACTTTCCCGTGTCATCCGCAGAGGGCACA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp ACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGGTCACACTTTTGCTTaGACTCGCTTACTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: TGRGHFCTFLWIPVLWCSGHTFA*TRLLGF
Trigger: AAAACCTAGTAAGCGAGTTCAAGCAAAAGTGTGACC...AGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp ACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTTCATTTTGTCTATTATaGTTTTCTGGGCCGCCGAAG +
Preference number: 4 (lower is better)
Translates to: TGRGHFCTFLWIPVLWCSSFCLL*FSGPPK
Trigger: CTTCGGCGGCCCAGAAAATCATAATAGACAAAATGA...AGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp AGGTGGATAACAGTGGAAATGCCCTCAGCACCGAGATACTCAGTGAGCAAGGCAAGGGAGATCAAATTGTaGCCGTCCCTCAGATCCTCG +
Preference number: 4 (lower is better)
Translates to: RWITVEMPSAPRYSVSKAREIKL*PSLRSS
Trigger: CGAGGATCTGAGGGACGGGCACAATTTGATCTCCCT...TGCCTTGCTCACTGAGTATCTCGGTGCTGAGGGCATTTCCACTGTTATCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTAAATTTGCAAGGTTaGTTTGAACAGCAACAGTAT +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLNLQG*FEQQQY
Trigger: ATACTGTTGCTGTTCAAAGCAACCTTGCAAATTTAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGGGGCTTTCGGATCTaGATTAGCTTCAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLERGFRI*ISFRVC
Trigger: ACAGACTCTGAAGCTAATGCAGATCCGAAAGCCCCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTTGATAATACTTCCTaGACACACTCACTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLDNTS*THSLPF
Trigger: AAAAGGAAGTGAGTGTGTGCAGGAAGTATTATCAAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTTCGTCCATTTTGCTCTaGTTCACCTCTATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: GSGALLHVPLDPSPVVLCSSILL*FTSISD
Trigger: GTCTGAAATAGAGGTGAAGCAGAGCAAAATGGACGA...ACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTGGATTCTGAGACCATaGCCTGAGCCAGAGAATCAA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEWILRP*PEPENQ
Trigger: TTGATTCTCTGGCTCAGGGCATGGTCTCAGAATCCA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGTCAATCACCCCTTCTaGCACAGCTTCTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEVNHPF*HSFFNS
Trigger: ACTGTTGAAGAAGCTGTGGCAGAAGGGGTGATTGAC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTTGTAATCAACTCTTaGTGTAAGGAAGATGATGTG +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFVINS*CKEDDV
Trigger: CACATCATCTTCCTTACAGCAAGAGTTGATTACAAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTCCACTGTCCTCACTaGTGCGGCCCCCGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLHCPH*CGPRCL
Trigger: AAGACAACGGGGGCCGCAGCAGTGAGGACAGTGGAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGAGGTCGTCCGCACCTaGCTCCAGGTTCGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVEVVRT*LQVRQF
Trigger: GAACTGGCGAACCTGGAGGCAGGTGCGGACGACCTC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTTGTGAATTTCTGGTaGTTTCAGATTCCACTTTTC +
Preference number: 4 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFVNFW*FQIPLF
Trigger: GAAAAGTGGAATCTGAAAGCACCAGAAATTCACAAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATCTCTGCCAGTGCCTaGTTCCAGGACTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDISASA*FQDWAS
Trigger: CGAGGCCCAGTCCTGGAAGCAGGCACTGGCAGAGAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGTCACAGCTTCCAGTTaGTCGTTCACAATCCCATGT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEVTASS*SFTIPC
Trigger: ACATGGGATTGTGAACGAGCAACTGGAAGCTGTGAC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTGAGCAAGCCTTTTTaGCTCGTCTACCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELSKPF*LVYLLF
Trigger: AAACAGCAGGTAGACGAGGCAAAAAGGCTTGCTCAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCCCCACCGGGGCCATaGCGTCCAGCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSPPGP*RPAHHH
Trigger: GTGATGATGAGCTGGACGGCATGGCCCCGGTGGGGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCCCCACCGGGGCCATaGCGTCCAGCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSPPGP*RPAHHH
Trigger: GTGATGATGAGCTGGACGGCATGGCCCCGGTGGGGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTGTGGCTAACTTGTTaGCTGCGATGTCAACCCAGT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELWLTC*LRCQPS
Trigger: ACTGGGTTGACATCGCAGGCAACAAGTTAGCCACAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGGTGTGTGTCAGCCATaGGAGGAGCTCGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTGVCQP*EELVQG
Trigger: GCCCTGGACGAGCTCCTCGCATGGCTGACACACACC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCCCAGAGGTTTAGATaGCAAGAGATGACGCTCTGT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESQRFR*QEMTLC
Trigger: ACAGAGCGTCATCTCTTGGCATCTAAACCTCTGGGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCAGGGCCTGCACGCTaGTGGTCCTCTTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSGPAR*WSSSPA
Trigger: AGCTGGGGAAGAGGACCAGCAGCGTGCAGGCCCTGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCGGTCTCCCAGCGGGTaGTTAGCTCCTGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRSPSG*LAPASG
Trigger: TCCAGATGCAGGAGCTAAGCACCCGCTGGGAGACCG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGAAGGTCTGGTGTTCTaGAATGAGGGTTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEEGLVF*NEGFHL
Trigger: GAGGTGAAAACCCTCATTGCAGAACACCAGACCTTC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGGAGCCAGACCTGCTaGCACTTGCTCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRSQTC*HLLTSR
Trigger: CCTGCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCCAGGAGCCAGACCTaGTGCCACTTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVARSQT*CHLLTS
Trigger: GCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCTGGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGTCGGACGCGTCGCTaGCTCGGCGGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSRTRR*LGGCWL
Trigger: GAGCCAGCAGCCGCCGAGGCAGCGACGCGTCCGACT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTTCCGGGTGGCAATCTGCTaGAGCATATCCAACCTGTGT +
Preference number: 4 (lower is better)
Translates to: GKAFMISLGSLLWPPSCFRVAIC*SISNLC
Trigger: ACACAGGTTGGATATGCTGCAGCAGATTGCCACCCG...GAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp CCATCTCCAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTTTCTGCGCACTCATTaGTTTTCTCCAGCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: PSPASRVGGTFARSFGSQFLRTH*FSPALY
Trigger: ATAAAGAGCTGGAGAAAAGCAATGAGTGCGCAGAAA...CTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTGGAGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTTCTCCATCTCCTTTaGTGGGATTTCTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFLHLL*WDFFLF
Trigger: AAAGAGAAAGAAATCCCACCAAAGGAGATGGAGAAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp GGATCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCCCTCTGAACTCGGGTaGCAATCTGCTGCAGCATAT +
Preference number: 4 (lower is better)
Translates to: GSLLWPPSCFRSMTNKQTPSELG*QSAAAY
Trigger: ATATGCTGCAGCAGATTGCCACCCGAGTTCAGAGGG...GGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTTCCACTGTGTCTGCATaGCCGCTCTGTACGCCTCGA +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKASTVSA*PLCTPR
Trigger: TCGAGGCGTACAGAGCGGCCATGCAGACACAGTGGA...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCAGCTGTACTTGCGCTaGATGGCATCTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEQLYLR*MASFRF
Trigger: GAATCTGAAAGATGCCATCCAGCGCAAGTACAGCTG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAATATTTCACCAGAGTaGGGCCAGATGAGTCCAACG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLENISPE*GQMSPT
Trigger: CGTTGGACTCATCTGGCCCCACTCTGGTGAAATATT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGTAATCATGAACTGTaGATGGCTGGAGTTTACAAA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERCNHEL*MAGVYK
Trigger: TTTGTAAACTCCAGCCATCCACAGTTCATGATTACA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACATATCCTGTGTTCTGTaGGGTACTTGTATCACTAAA +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNISCVL*GTCITK
Trigger: TTTAGTGATACAAGTACCCCACAGAACACAGGATAT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCAGCCAACACTCTCTaGTCACTGGGTGACAAAGTA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESANTL*SLGDKV
Trigger: TACTTTGTCACCCAGTGACCAGAGAGTGTTGGCTGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCCGTGTCGCTCTGCTaGCCGGCCAGCAGTGACGTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLAVSLC*PASSDV
Trigger: GACGTCACTGCTGGCCGGCCAGCAGAGCGACACGGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGTGGTAAGTTCTGGATaGCTGCTTCTTTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEVVSSG*LLLSVS
Trigger: GGACACAGAAAGAAGCAGCCATCCAGAACTTACCAC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCATTCGAAACTTCATTTaGCAACTCAGACAAGATAGC +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERIRNFI*QLRQDS
Trigger: GCTATCTTGTCTGAGTTGCCAAATGAAGTTTCGAAT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACATTCGAAACTTCATTTaGCAACTCAGACAAGATAGC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNIRNFI*QLRQDS
Trigger: GCTATCTTGTCTGAGTTGCCAAATGAAGTTTCGAAT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCCTCTTGCTTGGACTaGTACTTCTGTAACTCCACC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESSCLD*YFCNST
Trigger: GGTGGAGTTACAGAAGTACCAGTCCAAGCAAGAGGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCCTGCTTCCAGGACTaGGCCTCGGGAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLACFQD*ASGASG
Trigger: CCCAGAGGCTCCCGAGGCCCAGTCCTGGAAGCAGGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTAACTGGGCCTCTGTaGTCTGGAACTGGGTTAGAT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELTGPL*SGTGLD
Trigger: ATCTAACCCAGTTCCAGACCACAGAGGCCCAGTTAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTTTTGACGATAGCCTaGTCAATCCAGTCGCATCTG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELLTIA*SIQSHL
Trigger: CAGATGCGACTGGATTGACCAGGCTATCGTCAAAAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGCATGGACTGCAGCTaGCCGGCGAGCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTCMDCS*PASCRA
Trigger: TGCTCTGCAGCTCGCCGGCCAGCTGCAGTCCATGCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACACAGCTCCTTGTGCATaGACTGCAGCTGGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDTAPCA*TAAGRR
Trigger: TCGCCGGCCAGCTGCAGTCCATGCACAAGGAGCTGT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCTCGAGCCCTTCCCTaGCCCTCCAGGGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSRALP*PSRAPV
Trigger: AACTGGTGCCCTGGAGGGCCAGGGAAGGGCTCGAGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCCAGGTCTGTTCCAATaGGAGACATTGTGGCTAACT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEPGLFQ*ETLWLT
Trigger: AGTTAGCCACAATGTCTCCCATTGGAACAGACCTGG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGGAACCCTTTGGCCTaGCGCAAGGCGCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTWNPLA*RKALSS
Trigger: GCTGGACAGCGCCTTGCGCCAGGCCAAAGGGTTCCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCAGTTGATGAAGTCCTaGAGGGAGTTGTGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEQLMKS*RELWKF
Trigger: GAACTTCCACAACTCCCTCCAGGACTTCATCAACTG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGAGTTTGCTCAGCCTaGGTAAGCCAGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLERVCSA*VSQLMK
Trigger: CTTCATCAACTGGCTTACCCAGGCTGAGCAAACTCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCTTGGCCCTCTTCCTaGCTTCGTCCAGGGATCGCC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVAWPSS*LRPGIA
Trigger: GGCGATCCCTGGACGAAGCCAGGAAGAGGGCCAAGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCCTGCTAACCTCTGCTaGTGCTGCTTCGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTPANLC*CCFAQA
Trigger: GGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGCAGG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAGGCTTGGCTGTGGATaGCCGAGAACCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVRLGCG*PRTCSG
Trigger: CCCCGAGCAGGTTCTCGGCCATCCACAGCCAAGCCT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGGCTTGGCTGTGGATaGCCGAGAACCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTRLGCG*PRTCSG
Trigger: CCCCGAGCAGGTTCTCGGCCATCCACAGCCAAGCCT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTTCATGTCCAGGAGCTTaGCTTCGACCAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKASCPGA*LRPAAC
Trigger: GCAGGCAGCTGGTCGAAGCCAAGCTCCTGGACATGA...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCTTTGAGTGATTCCTaGTATCATGAGCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEALSDS*YHELGL
Trigger: CAGACCAAGCTCATGATATCAGGAATCACTCAAAGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCTTCTGTCAAGTTCTaGTCCAGCAAAGACGACTTG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESSVKF*SSKDDL
Trigger: CAAGTCGTCTTTGCTGGATCAGAACTTGACAGAAGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGACTCATGCCAGAGAGTaGGTACACTCTGATACTGTT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLETHARE*VHSDTV
Trigger: AACAGTATCAGAGTGTACTCACTCTCTGGCATGAGT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGGGACTGGAGATTACTaGGAACCTGCTGGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDGTGDY*EPAGAR
Trigger: GCGAGCACCAGCAGGTTCTCAGTAATCTCCAGTCCC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCAACAGTCATTTTCTaGCCGGAGTTGCAATCGATG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESTVIF*PELQSM
Trigger: CATCGATTGCAACTCCGGTCAGAAAATGACTGTTGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCCTAGGAACTGGTCTTaGAACTTTTCTCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEPRNWS*NFSLVL
Trigger: GAGCACAAGAGAAAAGTTTCAAGACCAGTTCCTAGG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCTTCTGTGTTTCAGTaGTCCAGGATAACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESSVFQ*SRITRH
Trigger: ATGCCGAGTTATCCTGGATCACTGAAACACAGAAGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTTCACTCGACTCGATaGGATCATTTCCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELHSTR*DHFLLC
Trigger: ACAAAGCAGGAAATGATCTCATCGAGTCGAGTGAAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCTCTTTCAGGTTGGTaGTGTCTTGGTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESLSGW*CLGQCW
Trigger: CCAACATTGACCAAGACATCACCAACCTGAAAGAGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGTCCAGGGCGTCGTTaGGCTTCCTCCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDCPGRR*ASSSFP
Trigger: TGGAAAGGAGGAGGAAGCTCAACGACGCCCTGGACA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTTATTTCCAAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTCTTCCGCCTCCGCCGTaGGCTGCCTCACCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: FISKVSTKVKVNSDEHFALPPPP*AASPAP
Trigger: TGGAGCGGGTGAGGCAGCTCACGGCGGAGGCGGAAG...AGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTTGGAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp ACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCGTAGTTAGGCCTTCCTaGTACTTTTGCACCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TGKAFMISLGSLLWPPSCVVRPS*YFCTKA
Trigger: AGCCTTGGTGCAAAAGTATCAGGAAGGCCTAACTAC...GCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp CCATCTCCAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGGGCACATTATATCCCTaGCATATGACTTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: PSPASRVGGTFARSFGSQGTLYP*HMTFDL
Trigger: AAGATCAAAAGTCATATGTCAGGGATATAATGTGCC...CTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTGGAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp ACACGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTGCATGCATTTAGAGAGGAGCCGGAGATGCTaGGCCAGATTTCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: TRDPTTDLEQQRPCMHLERSRRC*ARFLAE
Trigger: TTCAGCCAGAAATCTGGCTCAGCATCTCCGGCTCCT...CTCTAAATGCATGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR GCA 90 bp ACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTTGTACATCAATCACATaGTGGCGTAAAAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: TGRGHFCTFLWIPVLWCSCTSIT*WRKRFS
Trigger: TGAGAACCTTTTACGCCAGCATGTGATTGATGTACA...AGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCGATGAGAGTTGTTTaGCAAGACACACTCATCGTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESMRVV*QDTLIV
Trigger: GACGATGAGTGTGTCTTGGCAAACAACTCTCATCGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAATGTTATTCTTGTCTaGTATAACTGCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNNVILV*YNCFLF
Trigger: GAAGAGGAAGCAGTTATAGCAGACAAGAATAACATT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTTGATATCTGTCCTTaGAAAGCCTTGGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELDICP*KALVSS
Trigger: GGAAGAGACCAAGGCTTTGCAAGGACAGATATCAAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGATCCAAGAGTACCTCTaGGGTTTTCTTCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEIQEYL*GFLQLL
Trigger: GAGAAGCTGAAGAAAACCGCAGAGGTACTCTTGGAT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGAGAGCTTCTCAAACTaGTCTACTTTGGCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEESFSN*STLAFS
Trigger: GCTAAAGGCCAAAGTAGAGCAGTTTGAGAAGCTCTC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAATCTCTGCCAGTGCCTaGTTCCAGGACTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVISASA*FQDWAS
Trigger: CGAGGCCCAGTCCTGGAAGCAGGCACTGGCAGAGAT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCGCTCCAGCTGCAGGTaGCTCTCTGAGTTGATCTGG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRSSCR*LSELIW
Trigger: CCAGATCAACTCAGAGAGGCACCTGCAGCTGGAGCG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGCAGACGCTCCGCAATaGGTTCCAGGCTCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDADAPQ*VPGSQG
Trigger: TCCTTGAGAGCCTGGAACGCATTGCGGAGCGTCTGC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCAGCTTCCTGCTGCTaGTTTACGACCGAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVAASCC*FTTEGS
Trigger: CGACCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGCAGCTTCCTGCTGCTaGTTTACGACCGAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTAASCC*FTTEGS
Trigger: CGACCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTTCAGCAACAGTTCTaGTTGATGGTTCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELQQQF*LMVQPF
Trigger: GAAAGGCTGAACCATCAAGCAGAACTGTTGCTGAAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGATCGGGGACACCTTaGAAGCATCTGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRSGTP*KHLLPP
Trigger: AGGGGGCAGCAGATGCTTGCAAGGTGTCCCCGATCT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACGGTCTCCCAGCGGGTaGTTAGCTCCTGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVRSPSG*LAPASG
Trigger: TCCAGATGCAGGAGCTAAGCACCCGCTGGGAGACCG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCGGGTAGTCGCAGCTTaGTTCCCTGGATTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRVVAA*FPGLVC
Trigger: GCACACCAATCCAGGGAAGCAAGCTGCGACTACCCG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTTTGCTTCCGGCTCTaGTCCCTGGGCGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLCFRL*SLGGWE
Trigger: CTCCCAGCCGCCCAGGGAGCAGAGCCGGAAGCAAAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTCTGCTTCCGGCTTTaGTTCCGGCTCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLCFRL*FRLCSL
Trigger: CAGGGAGCAGAGCCGGAAGCAAAGCCGGAAGCAGAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCATGGTTTACCATAATTaGGTGTTAAAGGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERMVYHN*VLKDGE
Trigger: TTCTCCATCCTTTAACACGCAATTATGGTAAACCAT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTCCCTGGATTGGTGTaGCCTCTGCGGATGACACGG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDFPGLV*PLRMTR
Trigger: CCGTGTCATCCGCAGAGGGCACACCAATCCAGGGAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTTCAGTTCATCCACCTTCTaGTTGAGCGTTTCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: GKAFMISLGSLLWPPSCFSSSTF*LSVSAH
Trigger: GTGCGCAGAAACGCTCAAGCAGAAGGTGGATGAACT...GAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TCGCTATGCAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTTGCTCTGTTTTTGTCTaGTTATGCAAGTGTTCGTTG +
Preference number: 4 (lower is better)
Translates to: SLCRGHHCLQVAISSLTGCSVFV*LCKCSL
Trigger: CAACGAACACTTGCATAAGCAGACAAAAACAGAGCA...ACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTGCATAGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp AAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGCAGAGGGGACGCGCTCAGTTCTaGGCTCAGGCTCCTCACCTC +
Preference number: 4 (lower is better)
Translates to: KVSTKVKVNSDEHFAMQRGRAQF*AQAPHL
Trigger: GAGGTGAGGAGCCTGAGCGCAGAACTGAGCGCGTCC...CCTCTGCATAGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp GTGGTGCTCTGTGAGGTGCTCTTTCAGGATGTACAATGGATGACATCATTAATGCCCAGGGGAGATCTCTaGAGGGTGGTGGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: VVLCEVLFQDVQWMTSLMPRGDL*RVVALS
Trigger: AGAGAGTGCCACCACCCTGCAGAGATCTCCCCTGGG...CATTAATGATGTCATCCATTGTACATCCTGAAAGAGCACCTCACAGAGCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGCTGCTCCACGCACTaGCACAGCTGTAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDCCSTH*HSCRIQ
Trigger: CTGGATCCTACAGCTGTGCCAGTGCGTGGAGCAGCA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCATCGTCTTTGTAAATaGTTATCTCAATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNHRLCK*LSQSVC
Trigger: ACAGACAGATTGAGATAACCATTTACAAAGACGATG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGATCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCGAGCCTGAGAATATCTaGGATTCCTGGCTATCCTCC +
Preference number: 4 (lower is better)
Translates to: GSLLWPPSCFRSMTNKQTEPENI*DSWLSS
Trigger: GGAGGATAGCCAGGAATCCCAGATATTCTCAGGCTC...GGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCGTCTTCCAATGCATaGAACACCTCTCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESSSNA*NTSLFS
Trigger: TGAGAAGAGAGAGGTGTTCCATGCATTGGAAGACGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCAGGTGTTCACCTGTaGCTGGAACAAGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSGVHL*LEQAGG
Trigger: GCCCCCTGCTTGTTCCAGCCACAGGTGAACACCTGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGACTGCATCATTGCACTaGACTCTTCCTGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLETASLH*TLPEPF
Trigger: AAAAGGCTCAGGAAGAGTCCAGTGCAATGATGCAGT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCAGGTGTAGGTGTCTaGCGCCACCTGCTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLAGVGV*RHLLAV
Trigger: GACGGCCAGCAGGTGGCGCCAGACACCTACACCTGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGCCTGCTTCCAGGACTaGGCCTCGGGAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSACFQD*ASGASG
Trigger: CCCAGAGGCTCCCGAGGCCCAGTCCTGGAAGCAGGC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCGTCAAGCCATGCTTaGAAATCCTTAGACATTTGC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEASSHA*KSLDIC
Trigger: GCAAATGTCTAAGGATTTCCAAGCATGGCTTGACGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGAGAGGTCTCCTCGGTaGCCAGCATCATCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDERSPR*PASSCR
Trigger: CCTGCAAGATGATGCTGGCCACCGAGGAGACCTCTC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCCAGCTTTGGTGCCTaGGTTCCTATGGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSSFGA*VPMGSE
Trigger: CTCGGAGCCCATAGGAACCCAGGCACCAAAGCTGGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTGCTCCTCCAGCTTTaGTGCCTGGGTTCCTATGGG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLLLQL*CLGSYG
Trigger: CCCATAGGAACCCAGGCACCAAAGCTGGAGGAGCAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTGTCATGAAACTGGGTaGACTGAGAAATGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLECHETG*TEKWPH
Trigger: ATGAGGCCATTTCTCAGTCCACCCAGTTTCATGACA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGATTCTGAGCTTGTACTaGAGGTTGCTTGCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEILSLY*RLLASS
Trigger: CGAAGAAGCAAGCAACCTCCAGTACAAGCTCAGAAT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAACGTCCAGTTCGGTTaGTGGTATCGTAGACAGAAT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLENVQFG*WYRRQN
Trigger: ATTCTGTCTACGATACCACCAACCGAACTGGACGTT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTGTCGAAATCGAAGTTaGCAAATTCCCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLECRNRS*QIPSAP
Trigger: AGGAGCTGAGGGAATTTGCCAACTTCGATTTCGACA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCAACTTGGAATCGCTTaGCACACTTACACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEQLGIA*HTYTWL
Trigger: TAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGCCTCGGCGGCTGCTaGCTCTGCTTCCGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCLGGC*LCFRLC
Trigger: GCAAAGCCGGAAGCAGAGCCAGCAGCCGCCGAGGCA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTGCGTGTTAAAGGATaGAGAATCTTGGGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELRVKG*RILGVL
Trigger: CAGCACACCCAAGATTCTCCATCCTTTAACACGCAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGATCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCTCTCTGCCTTCCTATTaGCCAAGGTCAGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: GSLLWPPSCFRSMTNKQTSLPSY*PRSAHP
Trigger: TGGATGAGCTGACCTTGGCCAATAGGAAGGCAGAGA...GGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp ACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTGGAGCCGAAGCAACTaGTGCTCATGTTCCTTTATC +
Preference number: 4 (lower is better)
Translates to: TGKAFMISLGSLLWPPSCWSRSN*CSCSFI
Trigger: GATAAAGGAACATGAGCACCAGTTGCTTCGGCTCCA...GCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp ACAATTCCGATTCCTGGGCTGGAGAGAGATGGCTCAATGGCTATGAGCAGGCTGGCTGAGCCAGATTTCTaGCTGAAATCATCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: TIPIPGLERDGSMAMSRLAEPDF*LKSSSS
Trigger: TGACGAGGATGATTTCAGCCAGAAATCTGGCTCAGC...CAGCCTGCTCATAGCCATTGAGCCATCTCTCTCCAGCCCAGGAATCGGAATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR CCA 90 bp ACAATTCCGATTCCTGGGCTGGAGAGAGATGGCTCAATGGCTATGAGCAGGCTGTGGATCTCTCATGCTTaGGCAAATTCCAGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: TIPIPGLERDGSMAMSRLWISHA*ANSRVR
Trigger: CCTTACCCTGGAATTTGCCCAAGCATGAGAGATCCA...CAGCCTGCTCATAGCCATTGAGCCATCTCTCTCCAGCCCAGGAATCGGAATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR CAA 72 bp GCCACGTCTGAATCCCAAGGGTGCCACTCACTAGTCTaGTGGCTAGGCAAATATTACCCAGTGTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ATSESQGCHSLV*WLGKYYPVSWL
Trigger: AAGCCAAGACACTGGGTAATATTTGCCTAGCCACAAGACTAGTGAGTGGCACCCTTGGGATTCAGACGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR TCA 90 bp GGATCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCATCTCTGCTTCATTCTaGAACTGGACTCCCGACTCT +
Preference number: 4 (lower is better)
Translates to: GSLLWPPSCFRSMTNKQTISASF*NWTPDS
Trigger: AGAGTCGGGAGTCCAGTTTCAGAATGAAGCAGAGAT...GGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAAGAGTTTAGCGTACTaGCTCTCTAATCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEKSLAY*LSNLCN
Trigger: GTTGCACAGATTAGAGAGTCAGTACGCTAAACTCTT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp ACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTCGAGATGTCGCTCCTaGTTTCTGGATGTATTCAAG +
Preference number: 4 (lower is better)
Translates to: TGKAFMISLGSLLWPPSCSRCRS*FLDVFK
Trigger: CTTGAATACATCCAGAAATCAGGAGCGACATCTCGA...GCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTCTGTCGATTTCATTaGCTAGATAGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEFCRFH*LDSARR
Trigger: TCTCCTGGCACTATCTAGTCAATGAAATCGACAGAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTGGGACTGGAGATTACTaGGAACCTGCTGGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: YKKLTALRVGDTVPRLHIGTGDY*EPAGAR
Trigger: GCGAGCACCAGCAGGTTCTCAGTAATCTCCAGTCCC...AATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTGAGCTCTGAGCTGTaGCTGGCTCTTCGCCATCAG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLSSEL*LALRHQ
Trigger: CTGATGGCGAAGAGCCAGTCACAGCTCAGAGCTCAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGGGAGCGGGTCAGAGTaGTCTGGAGCTTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDGSGSE*SGAFHS
Trigger: GGAATGAAAAGCTCCAGATCACTCTGACCCGCTCCC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACCTGGCCAGCCGCTGTaGGCTGTTCATACTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVPGQPL*AVHTEV
Trigger: AACCTCAGTATGAACAGCTCACAGCGGCTGGCCAGG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTACCTCGCAGACGCTaGGCAGGCTATTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLPRRR*AGYWLC
Trigger: ACACAGCCAATAGCCTGCTCAGCGTCTGCGAGGTAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATGCAGTGACTTCTGTTaGGCCTGCAGCACGGACAGG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVCSDFC*ACSTDR
Trigger: CCTGTCCGTGCTGCAGGCTCAACAGAAGTCACTGCA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGCGGACGGAGGCTTTTaGTTGGCCACAAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTADGGF*LATSSS
Trigger: AGAGGAGCTTGTGGCCAATCAAAAGCCTCCGTCCGC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACACCAATCTGCTCCTTaGTCTTCTCCACCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVHQSAP*SSPPRR
Trigger: CCGCCGAGGTGGAGAAGATCAAGGAGCAGATTGGTG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCACCAATCTGCTCCTTaGTCTTCTCCACCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTHQSAP*SSPPRR
Trigger: CCGCCGAGGTGGAGAAGATCAAGGAGCAGATTGGTG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGACGACATCTTGTTTCTaGCTGAAATACTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLETTSCF*LKYFRW
Trigger: CCACCTGAAGTATTTCAGTCAGAAACAAGATGTCGT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGATCCAGAGATTTTTCTaGCTCTTCCAGCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEIQRFF*LFQPFH
Trigger: ATGGAATGGCTGGAAGAGTCAGAAAAATCTCTGGAT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTAGCTAGAGTAGGCTaGGTAGCAGTAATTGAAGAG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELARVG*VAVIEE
Trigger: CTCTTCAATTACTGCTACTCAGCCTACTCTAGCTAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGACGGTCTCCACGTCTaGGCACACAGACTGGATTTC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDDGLHV*AHRLDF
Trigger: GAAATCCAGTCTGTGTGCTCAGACGTGGAGACCGTC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGTGCCCTCTGCGGATaGCACGGGAAAGTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCALCG*HGKVGA
Trigger: TGCCCCGACTTTCCCGTGTCATCCGCAGAGGGCACA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp ACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCCTTGTTTTAAGGTCGTaGCTTCTGTATGCATGCCAC +
Preference number: 4 (lower is better)
Translates to: TGKAFMISLGSLLWPPSCLVLRS*LLYACH
Trigger: GTGGCATGCATACAGAAGTCACGACCTTAAAACAAG...GCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp CAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATCACGGCTTCCACCACTaGCATCATTTTATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QRFELVTQFLGCTFSRHHHGFHH*HHFIAD
Trigger: GTCAGCAATAAAATGATGTCAGTGGTGGAAGCCGTG...ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp ACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCCTGACATATGACTTTTaGTCTTTGAGTCTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: TGKAFMISLGSLLWPPSCLTYDF*SLSLVA
Trigger: CGCCACCAGACTCAAAGATCAAAAGTCATATGTCAG...GCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCATCGTTTGCACCAATaGCTTCGCCACCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDHRLHQ*LRHLRG
Trigger: TCCCCGAAGGTGGCGAAGGCATTGGTGCAAACGATG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCAAGCAGGGCCAGGGCTTTaGTGTTTTCTGGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: SLLWPPSCFRSMTNKQTQAGPGL*CFLADF
Trigger: AAAATCAGCCAGAAAACAGCAAAGCCCTGGCCCTGC...TTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCGTCCATTTTGCTCTaGTTCACCTCTATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESSILL*FTSISD
Trigger: GTCTGAAATAGAGGTGAAGCAGAGCAAAATGGACGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTGGTCTTTTTCAGTTaGATACCCATCAAACAGCAG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELVFFS*IPIKQQ
Trigger: CTGCTGTTTGATGGGTATGCAACTGAAAAAGACCAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACACCTCCTGGCAGTGCTaGTATGTGCACACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDTSWQC*YVHTEG
Trigger: CCCTTCAGTGTGCACATAGCAGCACTGCCAGGAGGT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCCTGTGTACTTCCTTaGATATCTCTCTGTAATTCC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEACVLP*ISLCNS
Trigger: GGAATTACAGAGAGATATGCAAGGAAGTACACAGGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCATCCAAAGCGTCCTaGACACTCAGGGAGCGGGTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSSKAS*TLRERV
Trigger: GACCCGCTCCCTGAGTGTGCAGGACGCTTTGGATGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTCACAACGGGAACCTaGTTGGTTGTCTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEFTTGT*LVVSFI
Trigger: GATAAAAGAGACAACCAAGCAGGTTCCCGTTGTGAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTTCAGCCTCTGGGCTaGCTCCAGTTGTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLQPLG*LQLLVH
Trigger: GTGAACCAACAACTGGAGGCAGCCCAGAGGCTGAAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTGCCTTCTAGTTGTCTaGTCAGTTCTGCTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLECLLVV*SVLLSS
Trigger: ACTTGAAAGCAGAACTGAGCAGACAACTAGAAGGCA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGCAGCACGGACAGGTaGTTGTTACTGTACGCCTGG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDCSTDR*LLLYAW
Trigger: CCAGGCGTACAGTAACAAGCACCTGTCCGTGCTGCA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCTGCAGCTTCCTGCTaGTGCTTTACGACCGAGGGG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSAASC*CFTTEG
Trigger: CCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGCAGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGGTGTGTGTCAGCCATaGGAGGAGCTCGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLGVCQP*EELVQG
Trigger: GCCCTGGACGAGCTCCTCGCATGGCTGACACACACC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGATGAGATCATTTCCTaGTTTGTTGACGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEDEIIS*FVDGFY
Trigger: GTAGAAGCCGTCAACAAAGCAGGAAATGATCTCATC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTTGCAAGCATCTGCTaGCCCCTCAGCATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLASIC*PLSIRL
Trigger: GAGCCTGATGCTGAGGGGGCAGCAGATGCTTGCAAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGATCGGGGACACCTTaGAAGCATCTGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTRSGTP*KHLLPP
Trigger: AGGGGGCAGCAGATGCTTGCAAGGTGTCCCCGATCT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTCTCTACCAGGCGCTaGACCACCTTTTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLSTRR*TTFSHR
Trigger: TCGGTGGGAAAAGGTGGTGCAGCGCCTGGTAGAGAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGAGCGCTTCAGGGCCTaGACGCTGCTGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLERFRA*TLLVLF
Trigger: GAAGAGGACCAGCAGCGTGCAGGCCCTGAAGCGCTC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGAGCGCTTCAGGGCCTaGACGCTGCTGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLERFRA*TLLVLF
Trigger: GAAGAGGACCAGCAGCGTGCAGGCCCTGAAGCGCTC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAACCTCTGCTGGTGCTaGTTCGCCCAGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLNLCWC*FAQAST
Trigger: GGTGCTGGCCTGGGCGAAGCAGCACCAGCAGAGGTT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCTAACCTCTGCTGGTaGTGCTTCGCCCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLANLCW*CFAQAS
Trigger: GCTGGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCCAGGAGCCAGACCTaGTGCCACTTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLARSQT*CHLLTS
Trigger: GCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCTGGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACGGGTAGTCGCAGCTTaGTTCCCTGGATTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVRVVAA*FPGLVC
Trigger: GCACACCAATCCAGGGAAGCAAGCTGCGACTACCCG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCGGGTAGTCGCAGCTTaGTTCCCTGGATTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTRVVAA*FPGLVC
Trigger: GCACACCAATCCAGGGAAGCAAGCTGCGACTACCCG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGGATGGCCGAGAACCTaGTCGGGGCACAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLGWPRT*SGHRSV
Trigger: CACAGACCTGTGCCCCGAGCAGGTTCTCGGCCATCC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTCCCTGGATTGGTGTaGCCTCTGCGGATGACACGG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTFPGLV*PLRMTR
Trigger: CCGTGTCATCCGCAGAGGGCACACCAATCCAGGGAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTAGCTCATCCACCTGCTaGTTCAGCTCCTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKASSSTC*FSSSSF
Trigger: GAAAGAGGAGGAGCTGAAGCAGCAGGTGGATGAGCT...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTTGTTCAGCAGCCCTGTaGGGCCATTTTCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKACSAAL*GHFPSV
Trigger: GACAGAAGGAAAATGGCCGCACAGGGCTGCTGAACA...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCAAGGTCAGCCAATAGCCTaGAATGGGACTGTGCAAATC +
Preference number: 4 (lower is better)
Translates to: SLLWPPSCFRSMTNKQTQGQPIA*NGTVQI
Trigger: GATTTGCACAGTCCCATTGCAGGCTATTGGCTGACC...TTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp ACAATTCCGATTCCTGGGCTGGAGAGAGATGGCTCAATGGCTATGAGCAGGCTGCTTTTGGATCTCTCATaGTTGGGCAAATTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TIPIPGLERDGSMAMSRLLLDLS*LGKFQG
Trigger: ACCCTGGAATTTGCCCAAGCATGAGAGATCCAAAAG...CAGCCTGCTCATAGCCATTGAGCCATCTCTCTCCAGCCCAGGAATCGGAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCAAAGTACCACACTTaGAAGGAGTCTAGCTTACTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESKYHT*KESSLL
Trigger: GAGTAAGCTAGACTCCTTGCAAGTGTGGTACTTTGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGCTTGGTCTGTTCCGTaGTCAGCATGCGTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDAWSVP*SACVLC
Trigger: GCAAAGGACGCATGCTGACCACGGAACAGACCAAGC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGATGGTCAAGCGGGCTaGGTGGTTTTCCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDDGQAG*VVFQKQ
Trigger: CTGCTTCTGGAAAACCACCCAGCCCGCTTGACCATC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCCACTGTGTCTGCATaGCCGCTCTGTACGCCTCGA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSTVSA*PLCTPR
Trigger: TCGAGGCGTACAGAGCGGCCATGCAGACACAGTGGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCCACTGTGTCTGCATaGCCGCTCTGTACGCCTCGA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSTVSA*PLCTPR
Trigger: TCGAGGCGTACAGAGCGGCCATGCAGACACAGTGGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGCTGCTCCACGCACTaGCACAGCTGTAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTCCSTH*HSCRIQ
Trigger: CTGGATCCTACAGCTGTGCCAGTGCGTGGAGCAGCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGCTCTGAGCTGTGACTaGCTCTTCGCCATCAGAACC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDALSCD*LFAIRT
Trigger: GGTTCTGATGGCGAAGAGCCAGTCACAGCTCAGAGC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCCAGCTGACTCTGGCTaGAAAACACCTGCACCATGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDPADSG*KTPAPC
Trigger: GCATGGTGCAGGTGTTTTCCAGCCAGAGTCAGCTGG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTCAGTGGTAAGTTCTaGATGGCTGCTTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEFSGKF*MAASFC
Trigger: ACAGAAAGAAGCAGCCATCCAGAACTTACCACTGAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGGCGCGTTCTCTGTGTaGCTCCTCCTCAGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLGAFSV*LLLSAC
Trigger: GCAAGCGCTGAGGAGGAGCCACACAGAGAACGCGCC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAATGTTTGCTGGCTTTaGCCTCGCAGGCCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTNVCWL*PRRPGA
Trigger: GGCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCCTGCTTCAGCCTCTaGGCTGCCTCCAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSCFSL*AASSCW
Trigger: CCAACAACTGGAGGCAGCCCAGAGGCTGAAGCAGGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTTCCAGCTTCTCGGTaGCTCCATCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLPASR*LHPPAP
Trigger: AGGAGCAGGTGGATGGAGCCACCGAGAAGCTGGAAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAACACATCAAGCTGCTaGTTGATTGTCTCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLENTSSC*LIVSVS
Trigger: AGAAACCGAGACAATCAACCAGCAGCTTGATGTGTT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGACTCCAGGGCATCCTaGAACCTTCCACAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDDSRAS*NLPQCS
Trigger: GCTACACTGTGGAAGGTTCCAGGATGCCCTGGAGTC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTGCTCCTCCAGCTTTaGTGCCTGGGTTCCTATGGG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLLLQL*CLGSYG
Trigger: CCCATAGGAACCCAGGCACCAAAGCTGGAGGAGCAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGCATGGACTGCAGCTaGCCGGCGAGCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLCMDCS*PASCRA
Trigger: TGCTCTGCAGCTCGCCGGCCAGCTGCAGTCCATGCA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGCTGAGACCTCAGAATaGCAGCGTCGATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDAETSE*QRRSPP
Trigger: TGGAGGAGATCGACGCTGCCATTCTGAGGTCTCAGC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGAACGGCAGCTTGCATaGCCTCTTCCAGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDERQLA*PLPVCP
Trigger: TGGACAGACTGGAAGAGGCCATGCAAGCTGCCGTTC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGGAACCCTTTGGCCTaGCGCAAGGCGCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLWNPLA*RKALSS
Trigger: GCTGGACAGCGCCTTGCGCCAGGCCAAAGGGTTCCA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCTTCGATTTCACCGTaGAACCCTTTGGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSSISP*NPLAWR
Trigger: GCGCCAGGCCAAAGGGTTCCACGGTGAAATCGAAGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTCCTTGGCTGTCTCTaGGAGACCTCCCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLLGCL*ETSQRF
Trigger: AAACCTCTGGGAGGTCTCCCAGAGACAGCCAAGGAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCTTGGCCCTCTTCCTaGCTTCGTCCAGGGATCGCC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLAWPSS*LRPGIA
Trigger: GGCGATCCCTGGACGAAGCCAGGAAGAGGGCCAAGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCGGAAGTGGATCTGTTaGGGGAAGCTCCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRKWIC*GKLLWM
Trigger: CATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCGACGCGGAAGTaGATCTGTTGGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTDSTRK*ICWGKL
Trigger: GAGCTTCCCCCAACAGATCCACTTCCGCGTCGAGTC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGACTCGACGCGGAAGTaGATCTGTTGGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVDSTRK*ICWGKL
Trigger: GAGCTTCCCCCAACAGATCCACTTCCGCGTCGAGTC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACACTGTGTTCGGACTCTaGCGGCTGCCGTCGTTATCA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDTVFGL*RLPSLS
Trigger: TGATAACGACGGCAGCCGCCAGAGTCCGAACACAGT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTGCCTCGGCGGCTGCTaGCTCTGCTTCCGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSCLGGC*LCFRLC
Trigger: GCAAAGCCGGAAGCAGAGCCAGCAGCCGCCGAGGCA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCTGTTTGCCAACCATaGTTTACCATAATTGCGTGT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEAVCQP*FTIIAC
Trigger: ACACGCAATTATGGTAAACCATGGTTGGCAAACAGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp ATGGATGACATCATTAATGTGTTGAATCTATTCAGTGAAAGGACTATGAAGGAGCTGCCCTGCTCCCTCTaGGGCCGTGCCTGTGCCACC +
Preference number: 4 (lower is better)
Translates to: MDDIINVLNLFSERTMKELPCSL*GRACAT
Trigger: GGTGGCACAGGCACGGCCCCAGAGGGAGCAGGGCAG...CTCCTTCATAGTCCTTTCACTGAATAGATTCAACACATTAATGATGTCATCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp GGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTTCCGGAAGTTTTCTCTCTaGAGAGACACAAAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: GKAFMISLGSLLWPPSCFRKFSL*RDTKSC
Trigger: GCACGACTTTGTGTCTCTCCAGAGAGAAAACTTCCG...GAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp CAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATGCCAATAGCCTGCAATaGGACTGTGCAAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: QRFELVTQFLGCTFSRHHANSLQ*DCANPS
Trigger: AGAAGGATTTGCACAGTCCCATTGCAGGCTATTGGC...ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp CCAACTATGGGACACGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTGCATGGATCTCTCATGCTTaGGCAAATTCCAGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: PTMGHGILQQTLSNRDLAWISHA*ANSRVR
Trigger: CCTTACCCTGGAATTTGCCCAAGCATGAGAGATCCA...TGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGTCCCATAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR CAA 72 bp AAAGATTCAGAGAAAGAGCTCCATGGTGCCCCAGTCTaGTCTCCCTGGGACAGGTGGATAACAGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: KDSEKELHGAPV*SPWDRWITVEM
Trigger: CATTTCCACTGTTATCCACCTGTCCCAGGGAGACAAGACTGGGGCACCATGGAGCTCTTTCTCTGAATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCGCAGACATGTCCTCTaGCTCTCCAGTGACATGGAT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRRHVL*LSSDMD
Trigger: ATCCATGTCACTGGAGAGTCAGAGGACATGTCTGCG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GATGGCTCAATGGCTATGAGCAGGCTGATATCTTCCAGAGAACTGATTACTCACCGCAGACATGTCCTCTaGCTCTCCAGTGACATGGAT +
Preference number: 4 (lower is better)
Translates to: DGSMAMSRLISSRELITHRRHVL*LSSDMD
Trigger: ATCCATGTCACTGGAGAGTCAGAGGACATGTCTGCG...GTGAGTAATCAGTTCTCTGGAAGATATCAGCCTGCTCATAGCCATTGAGCCATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTTGCAAGGTTGCTTTaGACAGCAACAGTATTCATG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEFARLL*TATVFM
Trigger: CATGAATACTGTTGCTGTTCAAAGCAACCTTGCAAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGGTATTCAATCCATTTaGCTTCAACATCGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEGIQSI*LQHRLH
Trigger: GTGCAAACGATGTTGAAGTCAAATGGATTGAATACC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTTCTTTGGCATCATTaGAAAACTCGAAATAGGCAG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELLWHH*KTRNRQ
Trigger: CTGCCTATTTCGAGTTTTTCAATGATGCCAAAGAAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGGGGATGGACGTCTTaGGTGGGTTGTCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTWGWTS*VGCQDS
Trigger: GGAATCCTGACAACCCACTCAAGACGTCCATCCCCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCAGTGGGCCACAATCTaGTGTGTTGTCATTGCGGGA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDQWATI*CVVIAG
Trigger: TCCCGCAATGACAACACATCAGATTGTGGCCCACTG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCCAGATGTACTTTCTaGATGCTCTGGGGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSRCTF*MLWGLA
Trigger: AGCGAGCCCCCAGAGCATTCAGAAAGTACATCTGGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGGTCCAGTTTGGTCTaGACTTCTCTGTGGGTTGCG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDWSSLV*TSLWVA
Trigger: CGCAACCCACAGAGAAGTTCAGACCAAACTGGACCA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGGGAGCGGGTCAGAGTaGTCTGGAGCTTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVGSGSE*SGAFHS
Trigger: GGAATGAAAAGCTCCAGATCACTCTGACCCGCTCCC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGTGAGCTGTTCATACTaGGGTTTCCGGGTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDVSCSY*GFRVSN
Trigger: GTTCGACACCCGGAAACCTCAGTATGAACAGCTCAC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCTCCTGGGCCTCCTTaGTCTTCGGTGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPPGPP*SSVPAA
Trigger: AGCAGCAGGCACCGAAGATCAAGGAGGCCCAGGAGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATGGGGTCCTAGGGAGTaGTGGACCTCTAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVWGPRE*WTSSCS
Trigger: AGAACAGCTAGAGGTCCATCACTCCCTAGGACCCCA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGGGGTCCTAGGGAGTaGTGGACCTCTAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTWGPRE*WTSSCS
Trigger: AGAACAGCTAGAGGTCCATCACTCCCTAGGACCCCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCTGGGGCAGGCAGCTaGGAGATGATTCGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVAGAGS*EMIRCV
Trigger: AACACAACGAATCATCTCTCAGCTGCCTGCCCCAGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCGTCAATCTCCTCTCTaGTTGCCTCTGCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRQSPL*LPLQLP
Trigger: AGGAAGCTGCAGAGGCAATCAGAGAGGAGATTGACG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTAGATGCCAAGAGATaGCGCTCTGTGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLDAKR*RSVSVS
Trigger: GCTGACGGACACAGAGCGTCATCTCTTGGCATCTAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCCTCCGAGTGATTTCTaGAACTCCTTGTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDPPSDF*NSLCWT
Trigger: GGTCCAGCACAAGGAGTTTCAGAAATCACTCGGAGG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTTCCAGTCTCTTCATaGACTCTTTATGTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELPVSS*TLYVAQ
Trigger: TTGAGCAACATAAAGAGTTCATGAAGAGACTGGAAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGACGGTCTCCACGTCTaGGCACACAGACTGGATTTC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVDGLHV*AHRLDF
Trigger: GAAATCCAGTCTGTGTGCTCAGACGTGGAGACCGTC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGGTGGATAACAGTGGAAATGCCCTCAGCACCGAGATACTCAGTGAGCAAGGCAAGCCAGATTTCTGGCTaGAATCATCCTCGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: RWITVEMPSAPRYSVSKASQISG*NHPRQK
Trigger: TTTCTGACGAGGATGATTTCAGCCAGAAATCTGGCT...TGCCTTGCTCACTGAGTATCTCGGTGCTGAGGGCATTTCCACTGTTATCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR TCA 90 bp ACACGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTGCATGCATTTAGAGAGCACCGAGCCCCCTTaGATCTTTCTTTTGGATCTC +
Preference number: 4 (lower is better)
Translates to: TRDPTTDLEQQRPCMHLESTEPP*IFLLDL
Trigger: GAGATCCAAAAGAAAGATTCAAGGGGGCTCGGTGCT...CTCTAAATGCATGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGGGAGATCAAATTGTaGCCGTCCCTCAGATCCTCG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDREIKL*PSLRSS
Trigger: CGAGGATCTGAGGGACGGGCACAATTTGATCTCCCT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GATGGCTCAATGGCTATGAGCAGGCTGATATCTTCCAGAGAACTGATTACTCACAGGGAGATCAAATTGTaGCCGTCCCTCAGATCCTCG +
Preference number: 4 (lower is better)
Translates to: DGSMAMSRLISSRELITHREIKL*PSLRSS
Trigger: CGAGGATCTGAGGGACGGGCACAATTTGATCTCCCT...GTGAGTAATCAGTTCTCTGGAAGATATCAGCCTGCTCATAGCCATTGAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTCATCACGCAGCTTTaGAACCCTCTGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLITQL*NPLHQL
Trigger: CAGCTGGTGCAGAGGGTTGCAAAGCTGCGTGATGAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTTCTCAGCATGCGTCCTTTaGTGTACACCGAAGAACATT +
Preference number: 4 (lower is better)
Translates to: GKAFMISLGSLLWPPSCFSACVL*CTPKNI
Trigger: AATGTTCTTCGGTGTACAGCAAAGGACGCATGCTGA...GAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTTCCGTGGTCAGCATaGGTCCTTTGCTGTACACCG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVPWSA*VLCCTP
Trigger: CGGTGTACAGCAAAGGACGCATGCTGACCACGGAAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTCCAGTTTGTGAATGCTaGTGGACCTGTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKAPVCEC*WTCHSC
Trigger: ACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGG...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTACTGGACATCTGTTaGTTAGAGAAGAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELLDIC*LEKRGF
Trigger: GAAACCTCTCTTCTCTAAGCAACAGATGTCCAGTAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTCGTGGCCTCACTGTaGCCTTCAGCATCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVFVASL*PSASVS
Trigger: GGAGACAGATGCTGAAGGGCACAGTGAGGCCACGAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCACAGACTCAGTGTCTaGAGGTGTAGGTGTCTGGCG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTHRLSV*RCRCLA
Trigger: CGCCAGACACCTACACCTGCAGACACTGAGTCTGTG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTATCTCTGCCAGTGCCTaGTTCCAGGACTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLISASA*FQDWAS
Trigger: CGAGGCCCAGTCCTGGAAGCAGGCACTGGCAGAGAT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGTCCATCTCTGCCAGTaGCTGCTTCCAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLVHLCQ*LLPGLG
Trigger: GCCCAGTCCTGGAAGCAGGCACTGGCAGAGATGGAC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCGGGTGTCGAACTCTTaGAGCAGAATCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTRVSNS*SRIWTC
Trigger: GCAGGTCCAGATTCTGCTGCAAGAGTTCGACACCCG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTTCAGCCTCTGGGCTaGCTCCAGTTGTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLQPLG*LQLLVH
Trigger: GTGAACCAACAACTGGAGGCAGCCCAGAGGCTGAAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGGGGGAGAGTCCCTCTaGTCTTCTTTCTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTGGESL*SSFLAS
Trigger: TGACGCCAAGAAAGAAGAGCAGAGGGACTCTCCCCC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCCCCACCGGGGCCATaGCGTCCAGCTCATCATCAC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSPPGP*RPAHHH
Trigger: GTGATGATGAGCTGGACGGCATGGCCCCGGTGGGGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGCAGAGGTCTGGTCTTaGTCAAGTCTGATGTCACCC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDAEVWS*SSLMSP
Trigger: GGGTGACATCAGACTTGAGCAAGACCAGACCTCTGC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGTGGTCATGATTTTATaGCCAGACGTAACAAGTTCA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEVVMIL*PDVTSS
Trigger: TGAACTTGTTACGTCTGGGCATAAAATCATGACCAC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATCTCCTCTCCCCTCTaGCTCAGAGTCTCGTATAGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDISSPL*LRVSYS
Trigger: GCTATACGAGACTCTGAGGCAGAGGGGAGAGGAGAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCAGCTTCCTGCTGCTaGTTTACGACCGAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLAASCC*FTTEGS
Trigger: CGACCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGAGCGCTTCAGGGCCTaGACGCTGCTGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSERFRA*TLLVLF
Trigger: GAAGAGGACCAGCAGCGTGCAGGCCCTGAAGCGCTC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCGGTCTCCCAGCGGGTaGTTAGCTCCTGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLRSPSG*LAPASG
Trigger: TCCAGATGCAGGAGCTAAGCACCCGCTGGGAGACCG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAATTCCTCTGCCTGTTaGAGGGCTGACTCTAGCCGC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVNSSAC*RADSSR
Trigger: GCGGCTAGAGTCAGCCCTGCAACAGGCAGAGGAATT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACGCAGGGTTTGCTCTaGTTCTGCCAGCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVTQGLL*FCQPLQ
Trigger: TTGGAGTGGCTGGCAGAAGCAGAGCAAACCCTGCGT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGATGAACTCTTTATGTTaGTCAATGAGAGTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEMNSLC*SMRVRR
Trigger: TCTCCGGACTCTCATTGAGCAACATAAAGAGTTCAT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTCTGCTTCCGGCTTTaGTTCCGGCTCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLCFRL*FRLCSL
Trigger: CAGGGAGCAGAGCCGGAAGCAAAGCCGGAAGCAGAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGGATGGCCGAGAACCTaGTCGGGGCACAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSGWPRT*SGHRSV
Trigger: CACAGACCTGTGCCCCGAGCAGGTTCTCGGCCATCC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCGGGTGGCAATCTGCTaGAGCATATCCAACCTGTGT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRVAIC*SISNLC
Trigger: ACACAGGTTGGATATGCTGCAGCAGATTGCCACCCG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTGTCAGCTCATCCACCTaGTGCTTCAGCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: YKKLTALRVGDTVPRLHIVSSST*CFSSSS
Trigger: AGAGGAGGAGCTGAAGCAGCAGGTGGATGAGCTGAC...AATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp CAGCAGATGTCTTTGAGGACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGAGCACTTCGCATCTCTaGTGGATGGCTTGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: QQMSLRTGKAFMISLGSLSTSHL*WMACFS
Trigger: CGAGAAGCAAGCCATCCAGCAGAGATGCGAAGTGCT...CAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGTCCTCAAAGACATCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp AGGTGGATAACAGTGGAAATGCCCTCAGCACCGAGATACTCAGTGAGCAAGGCACTTTTGGATCTCTCATaGTTGGGCAAATTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RWITVEMPSAPRYSVSKALLDLS*LGKFQG
Trigger: ACCCTGGAATTTGCCCAAGCATGAGAGATCCAAAAG...TGCCTTGCTCACTGAGTATCTCGGTGCTGAGGGCATTTCCACTGTTATCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR CCA 90 bp TACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTGCTTGGTCTGTTCCGTaGTCAGCATGCGTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: YKKLTALRVGDTVPRLHIAWSVP*SACVLC
Trigger: GCAAAGGACGCATGCTGACCACGGAACAGACCAAGC...AATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGCTTGGTCTGTTCCGTaGTCAGCATGCGTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTAWSVP*SACVLC
Trigger: GCAAAGGACGCATGCTGACCACGGAACAGACCAAGC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGCCTCAACTCATCGTaGCTTAACAGGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDCLNSS*LNRALS
Trigger: GCTGAGTGCCCTGTTAAGCCACGATGAGTTGAGGCA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGGCGCGTTCTCTGTGTaGCTCCTCCTCAGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSGAFSV*LLLSAC
Trigger: GCAAGCGCTGAGGAGGAGCCACACAGAGAACGCGCC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTTCTTCTGCCATCTTaGGAACAGCACATGATGTTT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEFLLPS*EQHMMF
Trigger: AAACATCATGTGCTGTTCCCAAGATGGCAGAAGAAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGGCGGTTTTCAGTCTaGGTGAGGAGATCACACAGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRRFSV*VRRSHS
Trigger: GCTGTGTGATCTCCTCACCCAGACTGAAAACCGCCT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCAGATTCCCCTTCGTaGCCTCACTGTGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSDSPS*PHCALQ
Trigger: CTGAAGGGCACAGTGAGGCCACGAAGGGGAATCTGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCAGATTCCCCTTCGTaGCCTCACTGTGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSDSPS*PHCALQ
Trigger: CTGAAGGGCACAGTGAGGCCACGAAGGGGAATCTGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGGCCTCGGGAGCCTCTaGGTTCTCTTCCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLGLGSL*VLFQKL
Trigger: GAGCTTCTGGAAGAGAACCCAGAGGCTCCCGAGGCC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGACTCCAGGGCATCCTaGAACCTTCCACAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVDSRAS*NLPQCS
Trigger: GCTACACTGTGGAAGGTTCCAGGATGCCCTGGAGTC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCCAGGGCATCCTaGAACCTTCCACAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTDSRAS*NLPQCS
Trigger: GCTACACTGTGGAAGGTTCCAGGATGCCCTGGAGTC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTCGAGCCCTTCCCTaGCCCTCCAGGGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSRALP*PSRAPV
Trigger: AACTGGTGCCCTGGAGGGCCAGGGAAGGGCTCGAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGAACGGCAGCTTGCATaGCCTCTTCCAGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTERQLA*PLPVCP
Trigger: TGGACAGACTGGAAGAGGCCATGCAAGCTGCCGTTC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCTTCGATTTCACCGTaGAACCCTTTGGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSSISP*NPLAWR
Trigger: GCGCCAGGCCAAAGGGTTCCACGGTGAAATCGAAGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCCTGGAGGGAGTTGTaGAAGTTCATGGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSWREL*KFMAKC
Trigger: GCACTTGGCCATGAACTTCCACAACTCCCTCCAGGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGCTTGGCCCTCTTCCTaGCTTCGTCCAGGGATCGCC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSAWPSS*LRPGIA
Trigger: GGCGATCCCTGGACGAAGCCAGGAAGAGGGCCAAGC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTTCATGGAACTGCTTaGCCCTCTTCCTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLHGTA*PSSWLR
Trigger: ACGAAGCCAGGAAGAGGGCCAAGCAGTTCCATGAAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGGTCTTCTGCCAGCTaGGGCTCAACTCGATACAGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTWSSAS*GSTRYS
Trigger: GCTGTATCGAGTTGAGCCCCAGCTGGCAGAAGACCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAAGTCAATGTCCCCGTaGACAGGCTGGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVKSMSP*TGWSSA
Trigger: GGCAGAAGACCAGCCTGTCCACGGGGACATTGACTT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGTGTGGACCACAGAGTaGAATTCCTCTGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDVWTTE*NSSACC
Trigger: GCAACAGGCAGAGGAATTCCACTCTGTGGTCCACAC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCTGCTAACCTCTGCTaGTGCTGCTTCGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPANLC*CCFAQA
Trigger: GGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGCAGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCGGAAGTGGATCTGTTaGGGGAAGCTCCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTRKWIC*GKLLWM
Trigger: CATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGGATTGGTGTGCCCTTaGGTGTGCTGGCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSGLVCP*VCWRQQ
Trigger: CTGCTGCCGCCAGCACACCCAAGGGCACACCAATCC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCTGAGCACACAGACTaGATTTCTGAAATGTCAAAG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESEHTD*ISEMSK
Trigger: CTTTGACATTTCAGAAATCCAGTCTGTGTGCTCAGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGGCTTGGCTGTGGATaGCCGAGAACCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSRLGCG*PRTCSG
Trigger: CCCCGAGCAGGTTCTCGGCCATCCACAGCCAAGCCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGCAGGTGACCTCCTCTaGGGTGTGGGGATTTTAGAA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDAGDLL*GVGILE
Trigger: TTCTAAAATCCCCACACCCCAGAGGAGGTCACCTGC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTCGCGGACTATGTTCTTaGACTCTGCCTGAATCCTCT +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKARGLCS*TLPESS
Trigger: AGAGGATTCAGGCAGAGTCCAAGAACATAGTCCGCG...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp GTGGTGCTCTGTGAGGTGCTCTTTCAGGATGTACAATGGATGACATCATTAATGCGCATCTCTGCTGGATaGCTTGCTTCTCGCGGACTA +
Preference number: 4 (lower is better)
Translates to: VVLCEVLFQDVQWMTSLMRISAG*LASRGL
Trigger: TAGTCCGCGAGAAGCAAGCCATCCAGCAGAGATGCG...CATTAATGATGTCATCCATTGTACATCCTGAAAGAGCACCTCACAGAGCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp GTGGTGCTCTGTGAGGTGCTCTTTCAGGATGTACAATGGATGACATCATTAATGCTAACAGAGCACGCCTaGTTAAGGTCAAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: VVLCEVLFQDVQWMTSLMLTEHA*LRSRLG
Trigger: CCCGAGCCTTGACCTTAACCAGGCGTGCTCTGTTAG...CATTAATGATGTCATCCATTGTACATCCTGAAAGAGCACCTCACAGAGCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTGCACAGGGCCTGCTaGAGGAGCTCAGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLHRAC*RSSDLL
Trigger: CAGCAGGTCTGAGCTCCTCCAGCAGGCCCTGTGCAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACGCAGACATGTCCTCTaGCTCTCCAGTGACATGGAT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVRRHVL*LSSDMD
Trigger: ATCCATGTCACTGGAGAGTCAGAGGACATGTCTGCG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAACCTTGAAGGAGTTTaGTGCGCCCAAACTCGATCC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDNLEGV*CAQTRS
Trigger: GGATCGAGTTTGGGCGCATCAAACTCCTTCAAGGTT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAACACTTGGCAAATCTaGGCCCCATTCAGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTNTWQI*APFSAV
Trigger: GACCGCACTGAATGGGGCTCAGATTTGCCAAGTGTT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGATCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCAAGAGTTTAGCGTACTaGCTCTCTAATCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: GSLLWPPSCFRSMTNKQTKSLAY*LSNLCN
Trigger: GTTGCACAGATTAGAGAGTCAGTACGCTAAACTCTT...GGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCAACTCTTCATGTTTATGTaGGACTCATGCCAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SLLWPPSCFRSMTNKQTQLFMFM*DSCQRV
Trigger: CACTCTCTGGCATGAGTCTCACATAAACATGAAGAG...TTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGGTCTGAAGAGCTTCTaGGAACTGCTCCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDGLKSF*ELLLLG
Trigger: ACCAAGAAGGAGCAGTTCTCAGAAGCTCTTCAGACC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACCTCTCCAGTGGTCTaGTTGATGGTGCCTGCAATC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVTSPVV*LMVPAI
Trigger: GATTGCAGGCACCATCAATCAGACCACTGGAGAGGT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTACCTCTCCAGTGGTCTaGTTGATGGTGCCTGCAATC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTTSPVV*LMVPAI
Trigger: GATTGCAGGCACCATCAATCAGACCACTGGAGAGGT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCTGAACCTGGTAAGTaGGGATGCTGCTTGCGGTGT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSEPGK*GCCLRC
Trigger: ACACCGCAAGCAGCATCCTCACTTACCAGGTTCAGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGTTTGTTCTGAGCTCTaGGCTGTGACTGGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVVCSEL*AVTGSS
Trigger: CGAAGAGCCAGTCACAGCTCAGAGCTCAGAACAAAC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGTCCTTCTTTGTTTCTaGGGTCACTGCAGACGTGTG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDVLLCF*GHCRRV
Trigger: CACACGTCTGCAGTGACCTCAGAAACAAAGAAGGAC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGGTTTTCAGTCTGGGTaGGGAGATCACACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVGFQSG*GDHTAL
Trigger: AAGGGCTGTGTGATCTCCTCACCCAGACTGAAAACC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGAAATGACGTCCTCTaGGAAGCTCTTCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRNDVL*EALLPR
Trigger: ACGAGGCAGAAGAGCTTCTCAGAGGACGTCATTTCT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGTGAGCTGTTCATACTaGGGTTTCCGGGTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVVSCSY*GFRVSN
Trigger: GTTCGACACCCGGAAACCTCAGTATGAACAGCTCAC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCCTGGCCAGCCGCTGTaGGCTGTTCATACTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLPGQPL*AVHTEV
Trigger: AACCTCAGTATGAACAGCTCACAGCGGCTGGCCAGG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACCTGGCCAGCCGCTGTaGGCTGTTCATACTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLPGQPL*AVHTEV
Trigger: AACCTCAGTATGAACAGCTCACAGCGGCTGGCCAGG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGCAGTGACTTCTGTTaGGCCTGCAGCACGGACAGG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCSDFC*ACSTDR
Trigger: CCTGTCCGTGCTGCAGGCTCAACAGAAGTCACTGCA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTATCAGAGGTTCCCTTTaGGTCTGCGGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTIRGSL*VCGFYH
Trigger: GTGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGAT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACGTCAATCTCCTCTCTaGTTGCCTCTGCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVRQSPL*LPLQLP
Trigger: AGGAAGCTGCAGAGGCAATCAGAGAGGAGATTGACG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTTCAATCTGCTGCTTaGCGGTCTCCAGGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLQSAA*RSPGLF
Trigger: GAACAGACCTGGAGACCGTCAAGCAGCAGATTGAAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTTCAATCTGCTGCTTaGCGGTCTCCAGGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLQSAA*RSPGLF
Trigger: GAACAGACCTGGAGACCGTCAAGCAGCAGATTGAAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTGTTGATAAGCTTCTaGCTTAAATTGCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELLISF*LKLLQL
Trigger: GAGCTGAAGCAATTTAAGTCAGAAGCTTATCAACAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGCTGCTGCTTTCTTTaGTCTGTCTTTTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESCCFL*SVFSKI
Trigger: TATTTTGGAAAAGACAGATCAAAGAAAGCAGCAGCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATGTACGTCTCTTCCTTaGTGGCAAAGGCGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVCTSLP*WQRRCR
Trigger: TCTGCACCGCCTTTGCCATCAAGGAAGAGACGTACA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCCTCCGAGTGATTTCTaGAACTCCTTGTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTPPSDF*NSLCWT
Trigger: GGTCCAGCACAAGGAGTTTCAGAAATCACTCGGAGG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGTCCAGGGCGTCGTTaGGCTTCCTCCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLCPGRR*ASSSFP
Trigger: TGGAAAGGAGGAGGAAGCTCAACGACGCCCTGGACA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTTCAGCGCTCTCTCTACATaGAAACTGAATTTCGGTGAT +
Preference number: 4 (lower is better)
Translates to: GKAFMISLGSLLWPPSCFSALST*KLNFGD
Trigger: ATCACCGAAATTCAGTTTTCATGTAGAGAGAGCGCT...GAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCAAGGATCAACGATGCCATaGAGAACTGCATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: SLLWPPSCFRSMTNKQTQGSTMP*RTASST
Trigger: TGTTGAAGATGCAGTTCTTCATGGCATCGTTGATCC...TTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp GTGGTGCTCTGTGAGGTGCTCTTTCAGGATGTACAATGGATGACATCATTAATGGTAGCTTCCTTCCACTaGTACTGCTGCCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: VVLCEVLFQDVQWMTSLMVASFH*YCCPES
Trigger: ACTCTCAGGGCAGCAGTATCAGTGGAAGGAAGCTAC...CATTAATGATGTCATCCATTGTACATCCTGAAAGAGCACCTCACAGAGCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAGGGAGATCAAATTGTaGCCGTCCCTCAGATCCTCG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVREIKL*PSLRSS
Trigger: CGAGGATCTGAGGGACGGGCACAATTTGATCTCCCT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGCAGGGCCAGGGCTTTaGTGTTTTCTGGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDAGPGL*CFLADF
Trigger: AAAATCAGCCAGAAAACAGCAAAGCCCTGGCCCTGC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCAAATTTAATATACTaGGTCATAAGAGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEANLIY*VIRVTR
Trigger: CCTGGTCACTCTTATGACGCAGTATATTAAATTTGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGTGAGTGGACAGACTTaGTTCGTCTTCCTCATCAGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDVSGQT*FVFLIS
Trigger: GCTGATGAGGAAGACGAAGCAAGTCTGTCCACTCAC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTCCTTCCTCTGGGCTaGTCATCAACACCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLLPLG*SSTPLL
Trigger: AAGAAGGGGTGTTGATGAGCAGCCCAGAGGAAGGAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTGCTTTCTCTCTGCTaGTTTCTAACTGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLLSLC*FLTAGS
Trigger: GCTGCCCGCAGTTAGAAAGCAGCAGAGAGAAAGCAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTCTCCAGCTCCTCCTaGAGGGAGTGCGTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLFSSSS*RECVSF
Trigger: GAAGCTGACGCACTCCCTGCAGGAGGAGCTGGAGAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCTGAGAAGCTCTTCTaGCTCGTCAGCTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSEKLF*LVSLSM
Trigger: CATGGACAAGCTGACGAGGCAGAAGAGCTTCTCAGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTTAGTGTCCATCTCTaGCAGTGCCTGCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLSVHL*QCLLPG
Trigger: TCCTGGAAGCAGGCACTGGCAGAGATGGACACTAAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGCTTGTTGCACTGCTTaGTCAAGGCTTCTAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDACCTA*SRLLSP
Trigger: GGGACTTAGAAGCCTTGAGCAAGCAGTGCAACAAGC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCAGGTGTTTGCAGCTaGGCTCTGAATAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVAGVCS*ALNKAL
Trigger: CAAGGCCTTATTCAGAGCGCAGCTGCAAACACCTGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACAGTTGACGGTTCCTTaGTTCAGCTCTGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVQLTVP*FSSAQE
Trigger: CTCCTGAGCAGAGCTGAAGCAAGGAACCGTCAACTG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCAGTTGACGGTTCCTTaGTTCAGCTCTGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTQLTVP*FSSAQE
Trigger: CTCCTGAGCAGAGCTGAAGCAAGGAACCGTCAACTG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATCTCCTCCACTTTCTaGGTGATTGTGTCGCTCACC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDISSTF*VIVSLT
Trigger: GGTGAGCGACACAATCACGCAGAAAGTGGAGGAGAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTTTTCTTCATTGACTaGTTCTCCTCTTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEFFFID*FSSSLD
Trigger: ATCCAGTGAAGAGGAGAAGCAGTCAATGAAGAAAAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTTCTTGGATATAAATaGCTTCCTTTGGGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEFLGYK*LPLGSV
Trigger: AACTGAGCCCAAAGGAAGGCATTTATATCCAAGAAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCAGACGCTCCGCAATaGGTTCCAGGCTCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLADAPQ*VPGSQG
Trigger: TCCTTGAGAGCCTGGAACGCATTGCGGAGCGTCTGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTATCTCCTCTCCCCTCTaGCTCAGAGTCTCGTATAGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTISSPL*LRVSYS
Trigger: GCTATACGAGACTCTGAGGCAGAGGGGAGAGGAGAT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAATCTCCTCTCTGATTaGCTCTGCAGCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDNLLSD*LCSFLL
Trigger: CAGCAGGAAGCTGCAGAGGCAATCAGAGAGGAGATT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGCTCTTCAATCTGCTaGTTGACGGTCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSSSIC*LTVSRS
Trigger: AGACCTGGAGACCGTCAAGCAGCAGATTGAAGAGCT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATATGTGCGTTAAGCTaGTCCTTGGCTGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDICALS*SLAVSG
Trigger: CCCAGAGACAGCCAAGGAGCAGCTTAACGCACATAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTTGCAAGCATCTGCTaGCCCCTCAGCATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLASIC*PLSIRL
Trigger: GAGCCTGATGCTGAGGGGGCAGCAGATGCTTGCAAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTTGCAAGCATCTGCTaGCCCCTCAGCATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLASIC*PLSIRL
Trigger: GAGCCTGATGCTGAGGGGGCAGCAGATGCTTGCAAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAAGTTCATGGCCAAGTaGAGGGCCTCCTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDKFMAK*RASSNF
Trigger: AAAGTTGGAGGAGGCCCTGCACTTGGCCATGAACTT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCTGTCAAAGATGTCTaGCACGGCGCTCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSVKDV*HGAHLQ
Trigger: CTGGAGATGAGCGCCGTGGCAGACATCTTTGACAGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTACACTTGGCTACCTaGCTTGTGACCTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLHLAT*LVTSSS
Trigger: TGAGGACGAGGTCACAAGGCAGGTAGCCAAGTGTAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCACGAACCATCACTGTaGTTCGCAGGATCCGAACCA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTHEPSL*FAGSEP
Trigger: TGGTTCGGATCCTGCGAAGCACAGTGATGGTTCGTG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACGGGTAGTCGCAGCTTaGTTCCCTGGATTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLRVVAA*FPGLVC
Trigger: GCACACCAATCCAGGGAAGCAAGCTGCGACTACCCG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTCCCTGGATTGGTGTaGCCTCTGCGGATGACACGG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFPGLV*PLRMTR
Trigger: CCGTGTCATCCGCAGAGGGCACACCAATCCAGGGAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTCCTGCAATGGGACTGTaGAAATCCTTCTTGGGAACT +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKAPAMGL*KSFLGT
Trigger: AGTTCCCAAGAAGGATTTGCACAGTCCCATTGCAGG...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACCCTCTGAACTCGGGTaGCAATCTGCTGCAGCATAT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVPSELG*QSAAAY
Trigger: ATATGCTGCAGCAGATTGCCACCCGAGTTCAGAGGG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGCTGCTCCACGCACTaGCACAGCTGTAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCCSTH*HSCRIQ
Trigger: CTGGATCCTACAGCTGTGCCAGTGCGTGGAGCAGCA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTCAGCTGTACTTGCGCTaGATGGCATCTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKAQLYLR*MASFRF
Trigger: GAATCTGAAAGATGCCATCCAGCGCAAGTACAGCTG...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGAACTGCTCCTTCTTaGTTGATATTTCTTTACTGG +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLERTAPS*LIFLYW
Trigger: CCAGTAAAGAAATATCAACCAAGAAGGAGCAGTTCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGCCTCAACTCATCGTaGCTTAACAGGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTCLNSS*LNRALS
Trigger: GCTGAGTGCCCTGTTAAGCCACGATGAGTTGAGGCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGATATCCTGTGTTCTGTaGGGTACTTGTATCACTAAA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEISCVL*GTCITK
Trigger: TTTAGTGATACAAGTACCCCACAGAACACAGGATAT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAATGTTTGCTGGCTTTaGCCTCGCAGGCCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLNVCWL*PRRPGA
Trigger: GGCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCTGGATGTCATTCTTaGCAGGAAGCAGCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSGCHS*QEAASP
Trigger: AGGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCTTGCAGCAGAATCTaGACCTGCTGCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSCSRI*TCCFCV
Trigger: CACACAGAAGCAGCAGGTCCAGATTCTGCTGCAAGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGAGAGGTCTCCTCGGTaGCCAGCATCATCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLERSPR*PASSCR
Trigger: CCTGCAAGATGATGCTGGCCACCGAGGAGACCTCTC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCCTTCTGGAGCAGAGTaGAGAACTCCTCCAGCTTAC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTPSGAE*RTPPAY
Trigger: GTAAGCTGGAGGAGTTCTCCACTCTGCTCCAGAAGG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGAGCCACTCGTTCAGTaGCTCCAGGGTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVEPLVQ*LQGLMK
Trigger: TTTCATGAGACCCTGGAGCCACTGAACGAGTGGCTC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCCAGCTTTGGTGCCTaGGTTCCTATGGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSSFGA*VPMGSE
Trigger: CTCGGAGCCCATAGGAACCCAGGCACCAAAGCTGGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCCAGCTTTGGTGCCTaGGTTCCTATGGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSSFGA*VPMGSE
Trigger: CTCGGAGCCCATAGGAACCCAGGCACCAAAGCTGGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTGCTCCTCCAGCTTTaGTGCCTGGGTTCCTATGGG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLLLQL*CLGSYG
Trigger: CCCATAGGAACCCAGGCACCAAAGCTGGAGGAGCAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTGCTCCTCCAGCTTTaGTGCCTGGGTTCCTATGGG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLLLQL*CLGSYG
Trigger: CCCATAGGAACCCAGGCACCAAAGCTGGAGGAGCAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCAGATGAAAACCATTTaGTCCAACTTATCCTGTACA +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEQMKTI*SNLSCT
Trigger: TGTACAGGATAAGTTGGACCAAATGGTTTTCATCTG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATGTCTTGGTCAATGTTaGTCTCCGCAGATCGGGGAC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVCLGQC*SPQIGD
Trigger: GTCCCCGATCTGCGGAGACCAACATTGACCAAGACA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGTCTTGGTCAATGTTaGTCTCCGCAGATCGGGGAC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTCLGQC*SPQIGD
Trigger: GTCCCCGATCTGCGGAGACCAACATTGACCAAGACA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGTTGTGGAAGTTCATaGCCAAGTGCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSCGSS*PSAGPP
Trigger: AGGAGGCCCTGCACTTGGCCATGAACTTCCACAACT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTTCATGGAACTGCTTaGCCCTCTTCCTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLHGTA*PSSWLR
Trigger: ACGAAGCCAGGAAGAGGGCCAAGCAGTTCCATGAAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTGCTCCACGCTTCATaGAACTGCTTGGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLLHAS*NCLALF
Trigger: GAAGAGGGCCAAGCAGTTCCATGAAGCGTGGAGCAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTGCTCCACGCTTCATaGAACTGCTTGGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLLHAS*NCLALF
Trigger: GAAGAGGGCCAAGCAGTTCCATGAAGCGTGGAGCAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGCGTCTGCTTTGATATaGAGAGTGCACACACGGTCT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDASALI*RVHTRS
Trigger: AGACCGTGTGTGCACTCTCCATATCAAAGCAGACGC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGTGTGGACCACAGAGTaGAATTCCTCTGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVVWTTE*NSSACC
Trigger: GCAACAGGCAGAGGAATTCCACTCTGTGGTCCACAC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTGTGGACCACAGAGTaGAATTCCTCTGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVWTTE*NSSACC
Trigger: GCAACAGGCAGAGGAATTCCACTCTGTGGTCCACAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCTGGGAGAGCACCATaGAAACGCAGGGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSGRAP*KRRVCS
Trigger: AGAGCAAACCCTGCGTTTCCATGGTGCTCTCCCAGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCTGGGAGAGCACCATaGAAACGCAGGGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSGRAP*KRRVCS
Trigger: AGAGCAAACCCTGCGTTTCCATGGTGCTCTCCCAGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGCAGGTGACCTCCTCTaGGGTGTGGGGATTTTAGAA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTAGDLL*GVGILE
Trigger: TTCTAAAATCCCCACACCCCAGAGGAGGTCACCTGC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTTCAATCAGGTTTCTCTaGAAAGCCTCGAATGCCGTC +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKASIRFL*KASNAV
Trigger: GACGGCATTCGAGGCTTTCCAGAGAAACCTGATTGA...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp CAGCAGATGTCTTTGAGGACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGCCTCCTGTACAGATTTaGGCTTCAAGGCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: QQMSLRTGKAFMISLGSLPPVQI*ASRHLR
Trigger: CCTCAGATGCCTTGAAGCCCAAATCTGTACAGGAGG...CAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGTCCTCAAAGACATCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp ACACGGGATCCTACAACAGACCTTGAGCAACAGAGACCTTGCATGCATTTAGAGGCTGAGCCAGATTTCTaGCTGAAATCATCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: TRDPTTDLEQQRPCMHLEAEPDF*LKSSSS
Trigger: TGACGAGGATGATTTCAGCCAGAAATCTGGCTCAGC...CTCTAAATGCATGCAAGGTCTCTGTTGCTCAAGGTCTGTTGTAGGATCCCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAACCTTGAAGGAGTTTaGTGCGCCCAAACTCGATCC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTNLEGV*CAQTRS
Trigger: GGATCGAGTTTGGGCGCATCAAACTCCTTCAAGGTT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGTTTGTCTTCGCAGCTaGCACTATCCCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVVCLRS*HYPSEL
Trigger: GAGTTCAGAGGGATAGTGTCAGCTGCGAAGACAAAC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTTTGTCTTCGCAGCTaGCACTATCCCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVCLRS*HYPSEL
Trigger: GAGTTCAGAGGGATAGTGTCAGCTGCGAAGACAAAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATCTTCTTTGGCATCATTaGAAAACTCGAAATAGGCAG +
Preference number: 4 (lower is better)
Translates to: QRFELVTQFLGCTFSRHHLLWHH*KTRNRQ
Trigger: CTGCCTATTTCGAGTTTTTCAATGATGCCAAAGAAG...ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGGTTTCGTAGAGTTTaGCAAGGGCTTCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDWFRRV*QGLLQL
Trigger: AAGCTGCAGAAGCCCTTGTCAAACTCTACGAAACCA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGCCGAGTACTGCTCTaGGTATTTCTGACACTCGTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSRVLL*VFLTLV
Trigger: GACGAGTGTCAGAAATACTCAGAGCAGTACTCGGCT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGTGCCTCAAGCAACCTaGTCCCCGTTTCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVVPQAT*SPFHSQ
Trigger: TTGACTATGAAACGGGGATCAGGTTGCTTGAGGCAC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTCAGCAGAAGCATCTaGCATGGATTCCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLSRSI*HGFLTV
Trigger: CACAGTGAGGAATCCATGTCAGATGCTTCTGCTGAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTTCCAGGTCCCTGCTaGTCCCTGTCACTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLPGPC*SLSLPV
Trigger: TACAGGAAGTGACAGGGATCAGCAGGGACCTGGAAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTCCTTCTTTGTTTCTaGGGTCACTGCAGACGTGTG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVLLCF*GHCRRV
Trigger: CACACGTCTGCAGTGACCTCAGAAACAAAGAAGGAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGGGTTCAGGGGACAGTaGTGTCCTTCTTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTGFRGQ*CPSLFL
Trigger: CAGAAACAAAGAAGGACATCACTGTCCCCTGAACCC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGAAATGACGTCCTCTaGGAAGCTCTTCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTRNDVL*EALLPR
Trigger: ACGAGGCAGAAGAGCTTCTCAGAGGACGTCATTTCT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGGGAGCGGGTCAGAGTaGTCTGGAGCTTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLGSGSE*SGAFHS
Trigger: GGAATGAAAAGCTCCAGATCACTCTGACCCGCTCCC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCCTTAGACATTTGCTaGAACTGGTGTGAGCTCGCA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSLDIC*NWCELA
Trigger: TGCGAGCTCACACCAGTTTCAGCAAATGTCTAAGGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTTTCCATCAATGACTaGTTCTCCTCCGTGACCGCT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDFSIND*FSSVTA
Trigger: AGCGGTCACGGAGGAGAATCAGTCATTGATGGAAAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTTGGAGCTGCTCAGTaGCCCTGTTTACCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDFGAAQ*PCLPFP
Trigger: TGGAAAAGGTAAACAGGGTCACTGAGCAGCTCCAAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTGCAGTGACTTCTGTTaGGCCTGCAGCACGGACAGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSCSDFC*ACSTDR
Trigger: CCTGTCCGTGCTGCAGGCTCAACAGAAGTCACTGCA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGAGCCACCTTCTTATTaGGAGTCTTCCACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDEPPSY*ESSTLS
Trigger: ACTCAAGGTGGAAGACTCTCAATAAGAAGGTGGCTC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCTTTTCTACAGCTGTaGGCCACTCGTTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSFLQL*ATRSVA
Trigger: AGCCACTGAACGAGTGGCTCACAGCTGTAGAAAAGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATGTCTCTCTTGCACTTaGCTGGCAGCTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVCLSCT*LAASPF
Trigger: GAAAGGAGAAGCTGCCAGTCAAGTGCAAGAGAGACA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGTCTCTCTTGCACTTaGCTGGCAGCTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTCLSCT*LAASPF
Trigger: GAAAGGAGAAGCTGCCAGTCAAGTGCAAGAGAGACA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGGTCTTGCTCAAGTCTaGTGTCACCCAGAGACATTA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDGLAQV*CHPETL
Trigger: TAATGTCTCTGGGTGACATCAGACTTGAGCAAGACC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACATTTCCTGCTTTGTTaGCGGCTTCTACCGTGGACT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVHFLLC*RLLPWT
Trigger: AGTCCACGGTAGAAGCCGTCAACAAAGCAGGAAATG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCCTGCAGGGCATCTGTaGACTGTCCAGAAAATAACA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDPAGHL*TVQKIT
Trigger: TGTTATTTTCTGGACAGTTCACAGATGCCCTGCAGG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGATACAGCCAATCAATaGGGGCCTGCAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLDTANQ*GPAGHL
Trigger: CAGATGCCCTGCAGGCCCTCATTGATTGGCTGTATC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTTTATGTTGCTCAATaGGAGTCCGGAGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLYVAQ*ESGEHP
Trigger: AGGATGCTCTCCGGACTCTCATTGAGCAACATAAAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTGTCCAGGGCGTCGTTaGGCTTCCTCCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSCPGRR*ASSSFP
Trigger: TGGAAAGGAGGAGGAAGCTCAACGACGCCCTGGACA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGGGAGTCTCCAAACTaGTTTCCCAGGAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTWESPN*FPRKNL
Trigger: CAGGTTCTTCCTGGGAAATCAGTTTGGAGACTCCCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGCAGAGGCAGTCACGGTGTGCCTaGGCCCTTGAAACTGAAACT +
Preference number: 4 (lower is better)
Translates to: KVSTKVKVNSDEHFAMQRQSRCA*ALETET
Trigger: AGTTTCAGTTTCAAGGGCTCAGGCACACCGTGACTG...CCTCTGCATAGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGTGCCTCTGGGCTGTaGTCCTGGACTGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSASGL*SWTDSL
Trigger: CAAGCTGTCAGTCCAGGATCACAGCCCAGAGGCACT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTCATCACGCAGCTTTaGAACCCTCTGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLITQL*NPLHQL
Trigger: CAGCTGGTGCAGAGGGTTGCAAAGCTGCGTGATGAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGTTCCGTGGTCAGCATaGGTCCTTTGCTGTACACCG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLVPWSA*VLCCTP
Trigger: CGGTGTACAGCAAAGGACGCATGCTGACCACGGAAC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGGGGCTTTCGGATCTaGATTAGCTTCAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRGFRI*ISFRVC
Trigger: ACAGACTCTGAAGCTAATGCAGATCCGAAAGCCCCT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CAGCAGATGTCTTTGAGGACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGAGGGGCTTTCGGATCTaGATTAGCTTCAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: QQMSLRTGKAFMISLGSLRGFRI*ISFRVC
Trigger: ACAGACTCTGAAGCTAATGCAGATCCGAAAGCCCCT...CAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGTCCTCAAAGACATCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCCAGTTTGTGAATGCTaGTGGACCTGTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTPVCEC*WTCHSC
Trigger: ACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAACCACACTCCGGTACTaGAGGAGCTCCTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLTTLRY*RSSSFS
Trigger: GGAAAAGGAGGAGCTCCTGCAGTACCGGAGTGTGGT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAATGTTATTCTTGTCTaGTATAACTGCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLENVILV*YNCFLF
Trigger: GAAGAGGAAGCAGTTATAGCAGACAAGAATAACATT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTATCGCTGATGGCTTTTaGTTTCTGCAACTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKAIADGF*FLQLVF
Trigger: GAAGACGAGTTGCAGAAAGCAAAAGCCATCAGCGAT...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAATTCTGCCAGCTTCCTaGGGTCTCACTGGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVILPAS*GLTGKS
Trigger: GCTTTTACCAGTGAGACCGCAGGAAGCTGGCAGAAT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACAACTCACACTGTACTaGTTCGTCCACAGTCAGTCG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVQLTLY*FVHSQS
Trigger: CGACTGACTGTGGACGAAGCAGTACAGTGTGAGTTG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGTCATGGTTGTTGTGTaGGGAGCCCCTCTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLVMVVV*GAPLWL
Trigger: TAGCCACAGAGGGGCTCCGCACACAACAACCATGAC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGATGTACTTTCTGAATaGTCTGGGGGCTCGCTGCAA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTDVLSE*SGGSLQ
Trigger: TTGCAGCGAGCCCCCAGAGCATTCAGAAAGTACATC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGATGTACTTTCTGAATaGTCTGGGGGCTCGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVDVLSE*SGGSLQ
Trigger: TTGCAGCGAGCCCCCAGAGCATTCAGAAAGTACATC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTCGTGGCCTCACTGTaGCCTTCAGCATCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLFVASL*PSASVS
Trigger: GGAGACAGATGCTGAAGGGCACAGTGAGGCCACGAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAGTTCTTGCTCGGACTaGTGTAGCCAGTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSSCSD*CSQCSN
Trigger: GTTTGAGCACTGGCTACAGCAGTCCGAGCAAGAACT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCTGAGAAGCTCTTCTaGCTCGTCAGCTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSEKLF*LVSLSM
Trigger: CATGGACAAGCTGACGAGGCAGAAGAGCTTCTCAGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCATCCAAAGCGTCCTaGACACTCAGGGAGCGGGTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSSKAS*TLRERV
Trigger: GACCCGCTCCCTGAGTGTGCAGGACGCTTTGGATGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACACAGACTCAGTGTCTaGAGGTGTAGGTGTCTGGCG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLHRLSV*RCRCLA
Trigger: CGCCAGACACCTACACCTGCAGACACTGAGTCTGTG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGCAGAATCTGGACCTaGTGCTTCTGTGTGTTCAAC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSRIWT*CFCVFN
Trigger: GTTGAACACACAGAAGCAGCAGGTCCAGATTCTGCT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTTCAGCCTCTGGGCTaGCTCCAGTTGTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLQPLG*LQLLVH
Trigger: GTGAACCAACAACTGGAGGCAGCCCAGAGGCTGAAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGCAGCACGGACAGGTaGTTGTTACTGTACGCCTGG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLCSTDR*LLLYAW
Trigger: CCAGGCGTACAGTAACAAGCACCTGTCCGTGCTGCA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCTTGTTGCACTGCTTaGTCAAGGCTTCTAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVACCTA*SRLLSP
Trigger: GGGACTTAGAAGCCTTGAGCAAGCAGTGCAACAAGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGCAGCTTGTTGCACTaGTTGCTCAAGGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSSLLH*LLKASK
Trigger: CTTAGAAGCCTTGAGCAAGCAGTGCAACAAGCTGCT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAACCAGTTCACATCTTaGTGCTTCACCTGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDNQFTS*CFTCKG
Trigger: ACCCTTGCAGGTGAAGCAGCAAGATGTGAACTGGTT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCTGTCCGCAGGCTCTaGCGAAGCAGCGATTTTCTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSVRRL*RSSDFL
Trigger: GAGAAAATCGCTGCTTCGGCAGAGCCTGCGGACAGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCTTGTAGAGCCTTGTaGTGTGAAATCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSCRAL*CEICSS
Trigger: GGAGGAGCAGATTTCACAGCACAAGGCTCTACAAGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTGCAGCTTCCTGCTaGTGCTTTACGACCGAGGGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSAASC*CFTTEG
Trigger: CCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGCAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAATCTCCTCTCTGATTaGCTCTGCAGCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVNLLSD*LCSFLL
Trigger: CAGCAGGAAGCTGCAGAGGCAATCAGAGAGGAGATT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTGTGGCTAACTTGTTaGCTGCGATGTCAACCCAGT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLWLTC*LRCQPS
Trigger: ACTGGGTTGACATCGCAGGCAACAAGTTAGCCACAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTCAGCTCTTCAATCTaGTGCTTGACGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTFSSSI*CLTVSR
Trigger: CCTGGAGACCGTCAAGCAGCAGATTGAAGAGCTGAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCTTGTACTGGAGGTTaGTTGCTTCTTCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVACTGG*LLLRLH
Trigger: GTGAAGGCGAAGAAGCAAGCAACCTCCAGTACAAGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAATATGTGCGTTAAGCTaGTCCTTGGCTGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVICALS*SLAVSG
Trigger: CCCAGAGACAGCCAAGGAGCAGCTTAACGCACATAT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCCACGTTCAGAGTTTaGTCAGCCTGGGTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLATFRV*SAWVSQ
Trigger: CTGGCTTACCCAGGCTGAGCAAACTCTGAACGTGGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCCACGTTCAGAGTTTaGTCAGCCTGGGTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLATFRV*SAWVSQ
Trigger: CTGGCTTACCCAGGCTGAGCAAACTCTGAACGTGGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTTCAGGTTGTCATCTaGCAGGGAGGTTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLQVVI*QGGFLL
Trigger: AAGGAGAAAACCTCCCTGGCAGATGACAACCTGAAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGAAGGTCTGGTGTTCTaGAATGAGGGTTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDEGLVF*NEGFHL
Trigger: GAGGTGAAAACCCTCATTGCAGAACACCAGACCTTC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGATCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCTTGGTTTCATTATTCTaGCTAGTGAGTTCATCCACC +
Preference number: 4 (lower is better)
Translates to: GSLLWPPSCFRSMTNKQTLVSLF*LVSSST
Trigger: GGTGGATGAACTCACTAGGCAGAATAATGAAACCAA...GGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TTTCTAGCCTACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGTTCCTGTGGGTCATCTaGTCTTCGATGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FLAYKKLTALRVGDTVPRFLWVI*SSMVFR
Trigger: CCTGAAGACCATCGAAGAGCAGATGACCCACAGGAA...CCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTAGGCTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTTCTTGGGAACTACCTTaGTCAGAAGAAAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKASWELP*SEESQP
Trigger: TGGCTGACTTTCTTCTGAGCAAGGTAGTTCCCAAGA...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGAGTCTAGCTTACTCTaGACCAAATCCTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDESSLL*TKSLSS
Trigger: GGAGGACAAGGATTTGGTGCAGAGTAAGCTAGACTC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCTTGGTCTGTTCCGTaGTCAGCATGCGTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLAWSVP*SACVLC
Trigger: GCAAAGGACGCATGCTGACCACGGAACAGACCAAGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGATGGTCAAGCGGGCTaGGTGGTTTTCCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLDGQAG*VVFQKQ
Trigger: CTGCTTCTGGAAAACCACCCAGCCCGCTTGACCATC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCCACTGTGTCTGCATaGCCGCTCTGTACGCCTCGA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSTVSA*PLCTPR
Trigger: TCGAGGCGTACAGAGCGGCCATGCAGACACAGTGGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGCTCCTCCTTTTCCATaGACTCCTGGACAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTAPPFP*TPGQGL
Trigger: AAGACCTTGTCCAGGAGTCCATGGAAAAGGAGGAGC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGGGTCAGCTTGGTACTaGGGCTCTCCACCCTCATCT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSGSAWY*GSPPSS
Trigger: AGATGAGGGTGGAGAGCCCCAGTACCAAGCTGACCC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACCAGCTGACTCTGGCTaGAAAACACCTGCACCATGC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLPADSG*KTPAPC
Trigger: GCATGGTGCAGGTGTTTTCCAGCCAGAGTCAGCTGG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTCTCCTCCTTCCTCTaGGCTGCTCATCAACACCCC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLFSSFL*AAHQHP
Trigger: GGGGTGTTGATGAGCAGCCCAGAGGAAGGAGGAGAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATGCCTGGAGTTTCTTaGGGAGGTTGGTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDMPGVS*GGWFCF
Trigger: GAAGCAAAACCAACCTCCCCAAGAAACTCCAGGCAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCTTGCTGCAAGACTTaGCAGCGTCTATCACCCTGT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSCCKT*QRLSPC
Trigger: ACAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGTCCTTGCAAAGCCTTaGTCTCTTCCAGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVVLAKP*SLPAAF
Trigger: AAAGGCAGCTGGAAGAGACCAAGGCTTTGCAAGGAC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTCCTTGCAAAGCCTTaGTCTCTTCCAGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVLAKP*SLPAAF
Trigger: AAAGGCAGCTGGAAGAGACCAAGGCTTTGCAAGGAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTGGTAAGCCATGGCTaGATATCTCTTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLVSHG*ISLSGG
Trigger: GCCTCCTGAAAGAGATATCCAGCCATGGCTTACCAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCCCCTGGTAAGCCATaGCTGGATATCTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSPGKP*LDISFR
Trigger: CCTGAAAGAGATATCCAGCCATGGCTTACCAGGGGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTGTCCATGGTCAACTaGTTGAGCTCTTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLSMVN*LSSCHL
Trigger: TAAGTGGCAAGAGCTCAACCAGTTGACCATGGACAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTAACTGGGCCTCTGTaGTCTGGAACTGGGTTAGAT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLTGPL*SGTGLD
Trigger: ATCTAACCCAGTTCCAGACCACAGAGGCCCAGTTAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAGCCACTGTTTTAACTaGGCCTCTGTGGTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSHCFN*ASVVWN
Trigger: GTTCCAGACCACAGAGGCCCAGTTAAAACAGTGGCT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGTGTTCAACATGTTTaGGTCAATGGACAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDCVQHV*VNGQGA
Trigger: GGCCCCTTGTCCATTGACCCAAACATGTTGAACACA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCCTGCTTCAGCCTCTaGGCTGCCTCCAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSCFSL*AASSCW
Trigger: CCAACAACTGGAGGCAGCCCAGAGGCTGAAGCAGGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGAGAGGTCTCCTCGGTaGCCAGCATCATCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSERSPR*PASSCR
Trigger: CCTGCAAGATGATGCTGGCCACCGAGGAGACCTCTC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGACTCCAGGGCATCCTaGAACCTTCCACAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLDSRAS*NLPQCS
Trigger: GCTACACTGTGGAAGGTTCCAGGATGCCCTGGAGTC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTACGGAGGCTTTTGATTaGCCACAAGCTCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTTEAFD*PQAPLC
Trigger: ACACAGAGGAGCTTGTGGCCAATCAAAAGCCTCCGT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCTGAGACCTCAGAATaGCAGCGTCGATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLAETSE*QRRSPP
Trigger: TGGAGGAGATCGACGCTGCCATTCTGAGGTCTCAGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCACTTAGCAAGCCTTTaGTGTGTGTCAGCCATGCGA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTHLASL*CVSAMR
Trigger: TCGCATGGCTGACACACACCAAAGGCTTGCTAAGTG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAAGTCAATGTCCCCGTaGACAGGCTGGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLKSMSP*TGWSSA
Trigger: GGCAGAAGACCAGCCTGTCCACGGGGACATTGACTT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAGCATCCTCATCATCTaGGAGAGCACCATGGAAACG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSILII*ESTMET
Trigger: CGTTTCCATGGTGCTCTCCCAGATGATGAGGATGCT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTACGAGGGAGGGTCAGTaGCCCTCCTCTTATAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLTREGQ*PSSYRS
Trigger: AGACCTATAAGAGGAGGGCCACTGACCCTCCCTCGT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTACGCATCTTTGTTTaGATGCAGAGCGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVRIFV*MQSGHE
Trigger: TTCGTGGCCGCTCTGCATCCAAACAAAGATGCGTAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAACTGTGTTCGGACTCTaGCGGCTGCCGTCGTTATCA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLTVFGL*RLPSLS
Trigger: TGATAACGACGGCAGCCGCCAGAGTCCGAACACAGT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTATCTCTGCTTCATTCTaGAACTGGACTCCCGACTCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTISASF*NWTPDS
Trigger: AGAGTCGGGAGTCCAGTTTCAGAATGAAGCAGAGAT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCTTCTGTCAAGTTCTaGTCCAGCAAAGACGACTTG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSSVKF*SSKDDL
Trigger: CAAGTCGTCTTTGCTGGATCAGAACTTGACAGAAGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCGAGATGTCGCTCCTaGTTTCTGGATGTATTCAAG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSRCRS*FLDVFK
Trigger: CTTGAATACATCCAGAAATCAGGAGCGACATCTCGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCTCTGGTCACTGGGTaGCAAAGTAGAGGCTTCGCA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSLVTG*QSRGFA
Trigger: TGCGAAGCCTCTACTTTGTCACCCAGTGACCAGAGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCCTAGGAACTGGTCTTaGAACTTTTCTCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDPRNWS*NFSLVL
Trigger: GAGCACAAGAGAAAAGTTTCAAGACCAGTTCCTAGG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCATCCATTCCTCCATaGGGAAACTCGGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSSIPP*GNSGFS
Trigger: GGAAAATCCCGAGTTTCCTCATGGAGGAATGGATGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCCCTTGAACCAACCTaGTTTCTTCTGAGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLALEPT*FLLRQC
Trigger: GCACTGCCTCAGAAGAAATCAGGTTGGTTCAAGGGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAACACCCCTTCTTTCTaGAAGCCCATTTCCCGAATG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTNTPSF*KPISRM
Trigger: CATTCGGGAAATGGGCTTTCAGAAAGAAGGGGTGTT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGGTTTTCAGTCTGGGTaGGGAGATCACACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLGFQSG*GDHTAL
Trigger: AAGGGCTGTGTGATCTCCTCACCCAGACTGAAAACC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGGTTTTCAGTCTGGGTaGGGAGATCACACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLGFQSG*GDHTAL
Trigger: AAGGGCTGTGTGATCTCCTCACCCAGACTGAAAACC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCCAGCAGGTTACCATTaGCTTCATCCTCTTCGCCAG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLPAGYH*LHPLRQ
Trigger: CTGGCGAAGAGGATGAAGTCAATGGTAACCTGCTGG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCATACTGCTGGTATTaGTCCACCAGGTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSYCWY*STRSLR
Trigger: CCTCAAAGACCTGGTGGATCAATACCAGCAGTATGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAGCAACCTGCTGACTTaGTATCTGTCCTTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSNLLT*YLSLQS
Trigger: GCTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCTACAGCAACCTGCTaGCTTGATATCTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSTATC*LDICPC
Trigger: GCAAGGACAGATATCAAGTCAGCAGGTTGCTGTAGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGAGTTTAGTGGCACTTaGCCTGGCTTGACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSEFSGT*PGLTRE
Trigger: CTCCCTGGTCAAGCCAGGTCAAGTGCCACTAAACTC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTTTCCATCAATGACTaGTTCTCCTCCGTGACCGCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTFSIND*FSSVTA
Trigger: AGCGGTCACGGAGGAGAATCAGTCATTGATGGAAAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTATCAGAGGTTCCCTTTaGGTCTGCGGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLIRGSL*VCGFYH
Trigger: GTGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGAT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACATCAAGCTGCTGGTTaGTTGTCTCGGTTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVHQAAG*LSRFLY
Trigger: GTACAGAAACCGAGACAATCAACCAGCAGCTTGATG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGAGCCACCTTCTTATTaGGAGTCTTCCACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVEPPSY*ESSTLS
Trigger: ACTCAAGGTGGAAGACTCTCAATAAGAAGGTGGCTC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGAGCCACCTTCTTATTaGGAGTCTTCCACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTEPPSY*ESSTLS
Trigger: ACTCAAGGTGGAAGACTCTCAATAAGAAGGTGGCTC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCAGGCAGCTGAGAGATaGTTCGTTGTGTTTCCGTTA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTQAAER*FVVFPL
Trigger: TAACGGAAACACAACGAATCATCTCTCAGCTGCCTG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGCTGGGGCAGGCAGCTaGGAGATGATTCGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSAGAGS*EMIRCV
Trigger: AACACAACGAATCATCTCTCAGCTGCCTGCCCCAGC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTTCAATCTGCTGCTTaGCGGTCTCCAGGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLQSAA*RSPGLF
Trigger: GAACAGACCTGGAGACCGTCAAGCAGCAGATTGAAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTAGATGCCAAGAGATaGCGCTCTGTGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLDAKR*RSVSVS
Trigger: GCTGACGGACACAGAGCGTCATCTCTTGGCATCTAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCTCTTTCAGGTTGGTaGTGTCTTGGTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSLSGW*CLGQCW
Trigger: CCAACATTGACCAAGACATCACCAACCTGAAAGAGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGGACCAGCTGGGCTTTaGTTTTGTCTGGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLGPAGL*FCLDRW
Trigger: CCAACGATCCAGACAAAATCAAAGCCCAGCTGGTCC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGGACCAGCTGGGCTTTaGTTTTGTCTGGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLGPAGL*FCLDRW
Trigger: CCAACGATCCAGACAAAATCAAAGCCCAGCTGGTCC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCCTCCGAGTGATTTCTaGAACTCCTTGTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLPPSDF*NSLCWT
Trigger: GGTCCAGCACAAGGAGTTTCAGAAATCACTCGGAGG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGATACAGCCAATCAATaGGGGCCTGCAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSDTANQ*GPAGHL
Trigger: CAGATGCCCTGCAGGCCCTCATTGATTGGCTGTATC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTTTATGTTGCTCAATaGGAGTCCGGAGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLYVAQ*ESGEHP
Trigger: AGGATGCTCTCCGGACTCTCATTGAGCAACATAAAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCTGGTGTTCTGCAATaGGGGTTTTCACCTCTTCGA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSGVLQ*GFSPLR
Trigger: TCGAAGAGGTGAAAACCCTCATTGCAGAACACCAGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTCGATTTGCGTCTGTaGGCCAGATGGATAGAAGCC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLDLRL*ARWIEA
Trigger: GGCTTCTATCCATCTGGCTCACAGACGCAAATCGAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTCGATTTGCGTCTGTaGGCCAGATGGATAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLDLRL*ARWIEA
Trigger: GGCTTCTATCCATCTGGCTCACAGACGCAAATCGAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGACGGTCTCCACGTCTaGGCACACAGACTGGATTTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSDGLHV*AHRLDF
Trigger: GAAATCCAGTCTGTGTGCTCAGACGTGGAGACCGTC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTTGTGCTTTATTTTCTTaGGATCGTTTGCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKACALFS*DRLLPA
Trigger: GGCAGGAAGCAAACGATCTCAAGAAAATAAAGCACA...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp CAGCAGATGTCTTTGAGGACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGTTCTTGGACTCTGCCTaGATCCTCTGCATCATCAAT +
Preference number: 4 (lower is better)
Translates to: QQMSLRTGKAFMISLGSLFLDSA*ILCIIN
Trigger: ATTGATGATGCAGAGGATTCAGGCAGAGTCCAAGAA...CAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGTCCTCAAAGACATCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTGTTCAGACAGTCGCGTaGTTGGGTTTTTATCATCAA +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKAVQTVA*LGFYHQ
Trigger: TTGATGATAAAAACCCAATCACGCGACTGTCTGAAC...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATGTCACAGCTGTACTTaGGCTGGATGGCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVCHSCT*AGWHLS
Trigger: TGAAAGATGCCATCCAGCGCAAGTACAGCTGTGACA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTGTCACAGCTGTACTTaGGCTGGATGGCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: YKKLTALRVGDTVPRLHICHSCT*AGWHLS
Trigger: TGAAAGATGCCATCCAGCGCAAGTACAGCTGTGACA...AATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGTCACAGCTGTACTTaGGCTGGATGGCATCTTTCA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTCHSCT*AGWHLS
Trigger: TGAAAGATGCCATCCAGCGCAAGTACAGCTGTGACA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTACCACACTCCGGTACTaGAGGAGCTCCTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSTTLRY*RSSSFS
Trigger: GGAAAAGGAGGAGCTCCTGCAGTACCGGAGTGTGGT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTACACAGATTCCTCTTaGTCCTCTCTTTCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDYTDSS*SSLSAD
Trigger: GTCTGCAGAAAGAGAGGAGCAAGAGGAATCTGTGTA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATCGCTGATGGCTTTTaGTTTCTGCAACTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDIADGF*FLQLVF
Trigger: GAAGACGAGTTGCAGAAAGCAAAAGCCATCAGCGAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCTGCCTTTTCTTTGTaGCAGTCAAAGTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSAFSL*QSKSRS
Trigger: GGACCTTGACTTTGACTGGCACAAAGAAAAGGCAGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACGCTTGCTTTCTCTCTaGTGCTTTCTAACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLRLLSL*CFLTAG
Trigger: GCCCGCAGTTAGAAAGCAGCAGAGAGAAAGCAAGCG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTGTGGCTTTTCTTCTaGCATCTTGGGAACAGCACA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVWLFF*HLGNST
Trigger: TGTGCTGTTCCCAAGATGGCAGAAGAAAAGCCACAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGCCGTCGTTTCCAGCTaGATTTTGGTATGTGAAAGG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTAVVSS*ILVCER
Trigger: CCTTTCACATACCAAAATGCAGCTGGAAACGACGGC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGCACCTTCAGCTCCTaGGTGTTCTTCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLCTFSS*VFFCSF
Trigger: GAAGCTGCAGAAGAACACGCAGGAGCTGAAGGTGCA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTCTCAAGTCCTCTGTaGCAAGAGAAGGCTTCACAA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDFSSPL*QEKASQ
Trigger: TTGTGAAGCCTTCTCTTGGCACAGAGGACTTGAGAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTTAGTGTCCATCTCTaGCAGTGCCTGCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLSVHL*QCLLPG
Trigger: TCCTGGAAGCAGGCACTGGCAGAGATGGACACTAAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAACTGGTTGAGCTCTTaGCACTTAGTGTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDNWLSS*HLVSIS
Trigger: AGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCTTCCAGCTTTTGTTaGCTGTCCATGGTCAACTGG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSSSFC*LSMVNW
Trigger: CCAGTTGACCATGGACAGGCAACAAAAGCTGGAAGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACAAGACATCCAGCTTTaGGGAAATCGGGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLQDIQL*GNRGRV
Trigger: GACTCTCCCCCGATTTCCGCAAAGCTGGATGTCTTG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCTAACGTCTCCGCTTaGAACAACACATCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVANVSA*NNTSEV
Trigger: AACCTCTGATGTGTTGTTGCAAGCGGAGACGTTAGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATGCATGCACGCCTTTTaGTTTCTCAGGGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVCMHAF*FLRVSA
Trigger: TGCAGAAACCCTGAGAAAGCAAAAGGCGTGCATGCA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTGTCCGCAGGCTCTaGCGAAGCAGCGATTTTCTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSVRRL*RSSDFL
Trigger: GAGAAAATCGCTGCTTCGGCAGAGCCTGCGGACAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCAGAGGTCTGGTCTTaGTCAAGTCTGATGTCACCC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLAEVWS*SSLMSP
Trigger: GGGTGACATCAGACTTGAGCAAGACCAGACCTCTGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGTAGAGGGTGTCGGCTaGCACATACTTTTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVVEGVG*HILFLD
Trigger: ATCCAAGAAAAGTATGTGGCAGCCGACACCCTCTAC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAATCTCCTCTCCCCTCTaGCTCAGAGTCTCGTATAGC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLISSPL*LRVSYS
Trigger: GCTATACGAGACTCTGAGGCAGAGGGGAGAGGAGAT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTGTGGCTAACTTGTTaGCTGCGATGTCAACCCAGT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLWLTC*LRCQPS
Trigger: ACTGGGTTGACATCGCAGGCAACAAGTTAGCCACAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCCCAGAGGTTTAGATaGCAAGAGATGACGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSQRFR*QEMTLC
Trigger: ACAGAGCGTCATCTCTTGGCATCTAAACCTCTGGGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAATTCCTCTGCCTGTTaGAGGGCTGACTCTAGCCGC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSNSSAC*RADSSR
Trigger: GCGGCTAGAGTCAGCCCTGCAACAGGCAGAGGAATT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTACGCAGGGTTTGCTCTaGTTCTGCCAGCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSTQGLL*FCQPLQ
Trigger: TTGGAGTGGCTGGCAGAAGCAGAGCAAACCCTGCGT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACACGAACCATCACTGTaGTTCGCAGGATCCGAACCA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLHEPSL*FAGSEP
Trigger: TGGTTCGGATCCTGCGAAGCACAGTGATGGTTCGTG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAAGACTTGTCTAATTTaGTGGCAGGTGACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDKTCLI*WQVTSS
Trigger: AGAGGAGGTCACCTGCCAGCAAATTAGACAAGTCTT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTTCTAGCCTACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGAGATCGTTTGCTTCCTaGCTGACCTCTTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: FLAYKKLTALRVGDTVPRRSFAS*LTSSAL
Trigger: CAAAGCTGAAGAGGTCAGGCAGGAAGCAAACGATCT...CCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTAGGCTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGGAGGAGCTCAGACCTaGTGTGACTTTTCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTGGAQT*CDFSLE
Trigger: TTCAAGAGAAAAGTCACAGCAGGTCTGAGCTCCTCC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATAGTGACCACGTaGTGTCTAATCCACTGGATG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTDIVTT*CLIHWM
Trigger: CATCCAGTGGATTAGACACCACGTGGTCACTATGTC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCCCTCTGAACTCGGGTaGCAATCTGCTGCAGCATAT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLPSELG*QSAAAY
Trigger: ATATGCTGCAGCAGATTGCCACCCGAGTTCAGAGGG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGCTTGGTCTGTTCCGTaGTCAGCATGCGTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSAWSVP*SACVLC
Trigger: GCAAAGGACGCATGCTGACCACGGAACAGACCAAGC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGATGGTCAAGCGGGCTaGGTGGTTTTCCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSDGQAG*VVFQKQ
Trigger: CTGCTTCTGGAAAACCACCCAGCCCGCTTGACCATC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGTTTGTGAATGCTGCTaGACCTGTCACAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVVCECC*TCHSCT
Trigger: AGTACAGCTGTGACAGGTCCAGCAGCATTCACAAAC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAATGCCTGGAGTTTCTTaGGGAGGTTGGTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVMPGVS*GGWFCF
Trigger: GAAGCAAAACCAACCTCCCCAAGAAACTCCAGGCAT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCGTTCTGTAAACGTTaGTGGCTTTTGCTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVAFCKR*WLLLSS
Trigger: GGAACTGAGCAAAAGCCACCAACGTTTACAGAACGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAGCAGTTGTCTGCTTTaGCTGGGAGACAGATCTTGT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSSCLL*LGDRSC
Trigger: ACAAGATCTGTCTCCCAGCCAAAGCAGACAACTGCT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAGGCGGTTTTCAGTCTaGGTGAGGAGATCACACAGC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLRRFSV*VRRSHS
Trigger: GCTGTGTGATCTCCTCACCCAGACTGAAAACCGCCT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGGCGGTTTTCAGTCTaGGTGAGGAGATCACACAGC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLRRFSV*VRRSHS
Trigger: GCTGTGTGATCTCCTCACCCAGACTGAAAACCGCCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCCTCTTGCTTGGACTaGTACTTCTGTAACTCCACC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSSCLD*YFCNST
Trigger: GGTGGAGTTACAGAAGTACCAGTCCAAGCAAGAGGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCAGATTCCCCTTCGTaGCCTCACTGTGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSDSPS*PHCALQ
Trigger: CTGAAGGGCACAGTGAGGCCACGAAGGGGAATCTGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACACTTTCTCATACTGCTaGTTCAGATTCCCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDTFSYC*FRFPFV
Trigger: CACGAAGGGGAATCTGAACCAGCAGTATGAGAAAGT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATGATCTTTCCGTGCTaGGCCTTGACTTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDMIFPC*ALTFSY
Trigger: GTATGAGAAAGTCAAGGCCCAGCACGGAAAGATCAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCTGGATGTCATTCTTaGCAGGAAGCAGCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSGCHS*QEAASP
Trigger: AGGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCATCAAGCGTCTTCTaGATGTCATTCTTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSSSVF*MSFLAG
Trigger: TCCTGCCAAGAATGACATCCAGAAGACGCTTGATGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGTTCGTTCACACACTTaGACAGATCATCGTATCTCC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDVRSHT*TDHRIS
Trigger: GGAGATACGATGATCTGTCCAAGTGTGTGAACGAAC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTGTCCATGGTCAACTaGTTGAGCTCTTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLSMVN*LSSCHL
Trigger: TAAGTGGCAAGAGCTCAACCAGTTGACCATGGACAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTGTCCATGGTCAACTaGTTGAGCTCTTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLSMVN*LSSCHL
Trigger: TAAGTGGCAAGAGCTCAACCAGTTGACCATGGACAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTAACTGGGCCTCTGTaGTCTGGAACTGGGTTAGAT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLTGPL*SGTGLD
Trigger: ATCTAACCCAGTTCCAGACCACAGAGGCCCAGTTAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGTGTTCAACATGTTTaGGTCAATGGACAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTCVQHV*VNGQGA
Trigger: GGCCCCTTGTCCATTGACCCAAACATGTTGAACACA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAACTCTCTGATTCAGTaGGATCCAGGGAGAACGTCA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVNSLIQ*DPGRTS
Trigger: TGACGTTCTCCCTGGATCCCACTGAATCAGAGAGTT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCCAGCATACCAAAGTaGTGGTCCATTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSSIPK*WSISFC
Trigger: GCAGAAGGAAATGGACCACCACTTTGGTATGCTGGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCGAGACCCTGGAGCTTaGTTTCTAAGAAAGAACACT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRDPGA*FLRKNT
Trigger: AGTGTTCTTTCTTAGAAACCAAGCTCCAGGGTCTCG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGAGCCACTCGTTCAGTaGCTCCAGGGTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLEPLVQ*LQGLMK
Trigger: TTTCATGAGACCCTGGAGCCACTGAACGAGTGGCTC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGAGCCACTCGTTCAGTaGCTCCAGGGTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLEPLVQ*LQGLMK
Trigger: TTTCATGAGACCCTGGAGCCACTGAACGAGTGGCTC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGAACGGCAGCTTGCATaGCCTCTTCCAGTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSERQLA*PLPVCP
Trigger: TGGACAGACTGGAAGAGGCCATGCAAGCTGCCGTTC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCCAGTTCAATCTCAATaGCTTTCGGGTCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTPVQSQ*LSGLLQ
Trigger: TTGGAGGAGACCCGAAAGCCATTGAGATTGAACTGG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATTCTGAGCTTGTACTaGAGGTTGCTTGCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDILSLY*RLLASS
Trigger: CGAAGAAGCAAGCAACCTCCAGTACAAGCTCAGAAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTCCTTGGCTGTCTCTaGGAGACCTCCCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLLGCL*ETSQRF
Trigger: AAACCTCTGGGAGGTCTCCCAGAGACAGCCAAGGAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGTCTTGGTCAATGTTaGTCTCCGCAGATCGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCLGQC*SPQIGD
Trigger: GTCCCCGATCTGCGGAGACCAACATTGACCAAGACA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCCTGGAGGGAGTTGTaGAAGTTCATGGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSWREL*KFMAKC
Trigger: GCACTTGGCCATGAACTTCCACAACTCCCTCCAGGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTTCATGGAACTGCTTaGCCCTCTTCCTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLHGTA*PSSWLR
Trigger: ACGAAGCCAGGAAGAGGGCCAAGCAGTTCCATGAAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTGCTCCACGCTTCATaGAACTGCTTGGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLLHAS*NCLALF
Trigger: GAAGAGGGCCAAGCAGTTCCATGAAGCGTGGAGCAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGTGTGGACCACAGAGTaGAATTCCTCTGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLVWTTE*NSSACC
Trigger: GCAACAGGCAGAGGAATTCCACTCTGTGGTCCACAC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCTGGGAGAGCACCATaGAAACGCAGGGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSGRAP*KRRVCS
Trigger: AGAGCAAACCCTGCGTTTCCATGGTGCTCTCCCAGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCTGGGAGAGCACCATaGAAACGCAGGGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSGRAP*KRRVCS
Trigger: AGAGCAAACCCTGCGTTTCCATGGTGCTCTCCCAGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTACTGTGTTCGGACTCTaGCGGCTGCCGTCGTTATCA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSTVFGL*RLPSLS
Trigger: TGATAACGACGGCAGCCGCCAGAGTCCGAACACAGT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCAGGTGACCTCCTCTaGGGTGTGGGGATTTTAGAA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLAGDLL*GVGILE
Trigger: TTCTAAAATCCCCACACCCCAGAGGAGGTCACCTGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCAGGTGACCTCCTCTaGGGTGTGGGGATTTTAGAA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLAGDLL*GVGILE
Trigger: TTCTAAAATCCCCACACCCCAGAGGAGGTCACCTGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGCAGAGGGCTTTGTCTGTTGTTTaGTTCAGCTGCCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: KVSTKVKVNSDEHFAMQRALSVV*FSCLPR
Trigger: CCTTGGCAGGCAGCTGAACCAAACAACAGACAAAGC...CCTCTGCATAGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp AAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGCAGAGGTCATCTGCTCTTCGATaGTCTTCAGGTGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: KVSTKVKVNSDEHFAMQRSSALR*SSGAAR
Trigger: ACGAGCTGCACCTGAAGACCATCGAAGAGCAGATGA...CCTCTGCATAGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGTTTGTCTTCGCAGCTaGCACTATCCCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLVCLRS*HYPSEL
Trigger: GAGTTCAGAGGGATAGTGTCAGCTGCGAAGACAAAC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGCTTTGAGTGATTCCTaGTATCATGAGCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTALSDS*YHELGL
Trigger: CAGACCAAGCTCATGATATCAGGAATCACTCAAAGC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTCCTGAGTTTAAGCTTTaGGTGATTCCTGATATCATG +
Preference number: 4 (lower is better)
Translates to: LNHIHCITQQMSLRTGKAPEFKL*VIPDIM
Trigger: CATGATATCAGGAATCACTCAAAGCTTAAACTCAGG...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TTTCTAGCCTACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGTCTTCTGTCAAGTTCTaGTCCAGCAAAGACGACTTG +
Preference number: 4 (lower is better)
Translates to: FLAYKKLTALRVGDTVPRSSVKF*SSKDDL
Trigger: CAAGTCGTCTTTGCTGGATCAGAACTTGACAGAAGA...CCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTAGGCTAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAGGTCTTCCAGTTTGTaGATGCTGCTGGACCTGTCA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLRSSSL*MLLDLS
Trigger: TGACAGGTCCAGCAGCATTCACAAACTGGAAGACCT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCATGCCAGAGAGTaGGTACACTCTGATACTGTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVTHARE*VHSDTV
Trigger: AACAGTATCAGAGTGTACTCACTCTCTGGCATGAGT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTACTCATGCCAGAGAGTaGGTACACTCTGATACTGTT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTTHARE*VHSDTV
Trigger: AACAGTATCAGAGTGTACTCACTCTCTGGCATGAGT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTCTTCATGTTTATGTaGGACTCATGCCAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLFMFM*DSCQRV
Trigger: CACTCTCTGGCATGAGTCTCACATAAACATGAAGAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTATATCCGAGCCTaGGAATATCTGGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVTYIRA*EYLGFL
Trigger: CAGGAATCCCAGATATTCTCAGGCTCGGATATAAGT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTTCTAGCCTACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGACTTATATCCGAGCCTaGGAATATCTGGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: FLAYKKLTALRVGDTVPRTYIRA*EYLGFL
Trigger: CAGGAATCCCAGATATTCTCAGGCTCGGATATAAGT...CCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTAGGCTAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTCTTTCTGCAGACTTaGGGAGCTCTTGATAATACT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLFLQT*GALDNT
Trigger: AGTATTATCAAGAGCTCCTCAAGTCTGCAGAAAGAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATGCTCTGAGTATTTCTaGCACTCGTCCATTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVCSEYF*HSSILL
Trigger: GAGCAAAATGGACGAGTGTCAGAAATACTCAGAGCA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGCCGAGTACTGCTCTaGGTATTTCTGACACTCGTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSRVLL*VFLTLV
Trigger: GACGAGTGTCAGAAATACTCAGAGCAGTACTCGGCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGGTCTGAAGAGCTTCTaGGAACTGCTCCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLGLKSF*ELLLLG
Trigger: ACCAAGAAGGAGCAGTTCTCAGAAGCTCTTCAGACC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGGTCTGAAGAGCTTCTaGGAACTGCTCCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLGLKSF*ELLLLG
Trigger: ACCAAGAAGGAGCAGTTCTCAGAAGCTCTTCAGACC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTTTTTAGTTTGTTCTaGGCTCTGAGCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLFSLF*ALSCDW
Trigger: CCAGTCACAGCTCAGAGCTCAGAACAAACTAAAAAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCACGGTCGTCACCTTaGAGGATTAGAGAGTCATGG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSRSSP*RIRESW
Trigger: CCATGACTCTCTAATCCTTCAAGGTGACGACCGTGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCACGGTCGTCACCTTaGAGGATTAGAGAGTCATGG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSRSSP*RIRESW
Trigger: CCATGACTCTCTAATCCTTCAAGGTGACGACCGTGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGTCACTTCCTGTAAATaGCAAATGGCCATCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVVTSCK*QMAILR
Trigger: TCTGAGGATGGCCATTTGTCATTTACAGGAAGTGAC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGACTCTTACCCATGTTaGGGCTCTCTGTCGCACTTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSDSYPC*GSLSHF
Trigger: GAAGTGCGACAGAGAGCCTCAACATGGGTAAGAGTC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCAGCAGGTTACCATTaGCTTCATCCTCTTCGCCAG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPAGYH*LHPLRQ
Trigger: CTGGCGAAGAGGATGAAGTCAATGGTAACCTGCTGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGAAATGACGTCCTCTaGGAAGCTCTTCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLRNDVL*EALLPR
Trigger: ACGAGGCAGAAGAGCTTCTCAGAGGACGTCATTTCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGATCCACCAGGTCTTTaGGGTTATTTCCAAGAACAC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVDPPGL*GYFQEH
Trigger: GTGTTCTTGGAAATAACCTCAAAGACCTGGTGGATC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCAACTATTTTATCCTTaGGTAAGAGGCCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDQLFYP*VRGPGL
Trigger: AAGACCTGGGCCTCTTACTCAAGGATAAAATAGTTG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGTGAGCTGTTCATACTaGGGTTTCCGGGTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSVSCSY*GFRVSN
Trigger: GTTCGACACCCGGAAACCTCAGTATGAACAGCTCAC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGTTCTTTTGTATCCTaGAGCTGCCTTTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTCSFVS*SCLWVS
Trigger: AGACACCCAAAGGCAGCTTCAGGATACAAAAGAACA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATGTTCTTTTGTATCCTaGAGCTGCCTTTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVCSFVS*SCLWVS
Trigger: AGACACCCAAAGGCAGCTTCAGGATACAAAAGAACA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACGGCACTCAACTTGGTaGTGTCTTTGTACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLRHSTW*CLCTWL
Trigger: AAGCCAGGTACAAAGACATCACCAAGTTGAGTGCCG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCAGCTTTTTCTTCATTaGCTGCTTCTCCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDQLFLH*LLLLFT
Trigger: AGTGAAGAGGAGAAGCAGTCAATGAAGAAAAAGCTG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCCCGGATGAAATCTTaGGTGTCTTTGATGGTAACG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSRMKS*VSLMVT
Trigger: CGTTACCATCAAAGACACTCAAGATTTCATCCGGGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCATTTCCTGCTTTGTTaGCGGCTTCTACCGTGGACT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLHFLLC*RLLPWT
Trigger: AGTCCACGGTAGAAGCCGTCAACAAAGCAGGAAATG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTAGATGCCAAGAGATaGCGCTCTGTGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLDAKR*RSVSVS
Trigger: GCTGACGGACACAGAGCGTCATCTCTTGGCATCTAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTGTACGTCTCTTCCTTaGTGGCAAAGGCGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSCTSLP*WQRRCR
Trigger: TCTGCACCGCCTTTGCCATCAAGGAAGAGACGTACA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCATCTTGTTTCTGACTaGAATACTTCAGGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDHLVSD*NTSGGF
Trigger: GAACCCACCTGAAGTATTTCAGTCAGAAACAAGATG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGGACCAGCTGGGCTTTaGTTTTGTCTGGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSGPAGL*FCLDRW
Trigger: CCAACGATCCAGACAAAATCAAAGCCCAGCTGGTCC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCTCCGAGTGATTTCTaGAACTCCTTGTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPPSDF*NSLCWT
Trigger: GGTCCAGCACAAGGAGTTTCAGAAATCACTCGGAGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAATGTTTGCCTCCGAGTaGTTTCTGAAACTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVMFASE*FLKLLV
Trigger: CACAAGGAGTTTCAGAAATCACTCGGAGGCAAACAT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTCGATTTGCGTCTGTaGGCCAGATGGATAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLDLRL*ARWIEA
Trigger: GGCTTCTATCCATCTGGCTCACAGACGCAAATCGAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGGGAGTCTCCAAACTaGTTTCCCAGGAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLWESPN*FPRKNL
Trigger: CAGGTTCTTCCTGGGAAATCAGTTTGGAGACTCCCA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGCTTTACAGGGAGTTaGCATTTTGCTGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDCFTGS*HFAVCQ
Trigger: TTGGCAAACAGCAAAATGTCAACTCCCTGTAAAGCA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCGATGAGAGTTGTTTaGCAAGACACACTCATCGTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSMRVV*QDTLIV
Trigger: GACGATGAGTGTGTCTTGGCAAACAACTCTCATCGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATGGCTTTTGCTTTCTaGAACTCGTCTTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDMAFAF*NSSSNA
Trigger: TGCATTGGAAGACGAGTTGCAGAAAGCAAAAGCCAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGACACTCGTCCATTTTaGTCTGCTTCACCTCTATTT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDDTRPF*SASPLF
Trigger: AAATAGAGGTGAAGCAGAGCAAAATGGACGAGTGTC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAGTGAGGATGCTGCTTaGGGTGTCTCTGTCAATCAC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSEDAA*GVSVNH
Trigger: GTGATTGACAGAGACACCGCAAGCAGCATCCTCACT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACAACTCACACTGTACTaGTTCGTCCACAGTCAGTCG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLQLTLY*FVHSQS
Trigger: CGACTGACTGTGGACGAAGCAGTACAGTGTGAGTTG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTATGATCCCCAGCTaGTTAGCGGCATCCAGACCA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSMIPS*LAASRP
Trigger: TGGTCTGGATGCCGCTAAGCAGCTGGGGATCATAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCCGTAAGCCCCGTTTaGACATTCTTCGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSVSPV*TFFASP
Trigger: AGGTGAAGCGAAGAATGTGCAAACGGGGCTTACGGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGAACTGGAGAATGCCTaGTTTTCCTTCGGAGATACT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVELENA*FSFGDT
Trigger: AGTATCTCCGAAGGAAAAGCAGGCATTCTCCAGTTC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGAACTGGAGAATGCCTaGTTTTCCTTCGGAGATACT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTELENA*FSFGDT
Trigger: AGTATCTCCGAAGGAAAAGCAGGCATTCTCCAGTTC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGGCCTTCACAGATCTaGTTTTCTCTGACACCCAAT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTWPSQI*FSLTPN
Trigger: ATTGGGTGTCAGAGAAAAGCAGATCTGTGAAGGCCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATGGCCTTCACAGATCTaGTTTTCTCTGACACCCAAT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVWPSQI*FSLTPN
Trigger: ATTGGGTGTCAGAGAAAAGCAGATCTGTGAAGGCCA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGGGAGACAGATCTTGTaGATAATCAGAGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDGRQIL*IIRDEG
Trigger: TCCTTCATCTCTGATTATGCACAAGATCTGTCTCCC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGTGGTTACCAGCTCCTaGAGGTCAAGAAAACCCTTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLVVTSS*RSRKPF
Trigger: GAAGGGTTTTCTTGACCTGCAGGAGCTGGTAACCAC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGTTCTTGCTCGGACTaGTGTAGCCAGTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSSCSD*CSQCSN
Trigger: GTTTGAGCACTGGCTACAGCAGTCCGAGCAAGAACT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAATCCAAGAGTACCTCTaGGGTTTTCTTCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVIQEYL*GFLQLL
Trigger: GAGAAGCTGAAGAAAACCGCAGAGGTACTCTTGGAT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGAGAGCTTCTCAAACTaGTCTACTTTGGCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTESFSN*STLAFS
Trigger: GCTAAAGGCCAAAGTAGAGCAGTTTGAGAAGCTCTC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCTTTCAGGAGGCTGTaGAAAGCTTCGAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSFRRL*KASRSF
Trigger: GAAAGATCTCGAAGCTTTGCACAGCCTCCTGAAAGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATCTTCTCTAACCACTaGATCATTGCACTGGACTCT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDIFSNH*IIALDS
Trigger: AGAGTCCAGTGCAATGATGCAGTGGTTAGAGAAGAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTTAGTGTCCATCTCTaGCAGTGCCTGCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLSVHL*QCLLPG
Trigger: TCCTGGAAGCAGGCACTGGCAGAGATGGACACTAAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGCCTTCTAGTTGTCTaGTCAGTTCTGCTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDCLLVV*SVLLSS
Trigger: ACTTGAAAGCAGAACTGAGCAGACAACTAGAAGGCA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCAAGACATCCAGCTTTaGGGAAATCGGGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSQDIQL*GNRGRV
Trigger: GACTCTCCCCCGATTTCCGCAAAGCTGGATGTCTTG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTGCCAAAGTCTTTCTaGGAGTTAAGTAACGACTCC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLPKSF*ELSNDS
Trigger: GGAGTCGTTACTTAACTCGCAGAAAGACTTTGGCAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCTTGTTGCACTGCTTaGTCAAGGCTTCTAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLACCTA*SRLLSP
Trigger: GGGACTTAGAAGCCTTGAGCAAGCAGTGCAACAAGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACAGTTCACATCTTGCTaGTTCACCTGCAAGGGTTCG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLQFTSC*FTCKGS
Trigger: CGAACCCTTGCAGGTGAAGCAGCAAGATGTGAACTG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAATCTCCTCCACTTTCTaGGTGATTGTGTCGCTCACC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLISSTF*VIVSLT
Trigger: GGTGAGCGACACAATCACGCAGAAAGTGGAGGAGAT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGCTCTTCAATCTGCTaGTTGACGGTCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSSSIC*LTVSRS
Trigger: AGACCTGGAGACCGTCAAGCAGCAGATTGAAGAGCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTTCAGCAACAGTTCTaGTTGATGGTTCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLQQQF*LMVQPF
Trigger: GAAAGGCTGAACCATCAAGCAGAACTGTTGCTGAAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGTGTGCTTGTCTaGCTCCTCTGTTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTDCVLV*LLCYFL
Trigger: AAGAAAGTAACAGAGGAGGCAGACAAGCACACAGTC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGATGAGATCATTTCCTaGTTTGTTGACGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDDEIIS*FVDGFY
Trigger: GTAGAAGCCGTCAACAAAGCAGGAAATGATCTCATC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAAGTTCATGGCCAAGTaGAGGGCCTCCTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLKFMAK*RASSNF
Trigger: AAAGTTGGAGGAGGCCCTGCACTTGGCCATGAACTT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTGTCAAAGATGTCTaGCACGGCGCTCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSVKDV*HGAHLQ
Trigger: CTGGAGATGAGCGCCGTGGCAGACATCTTTGACAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTACACTTGGCTACCTaGCTTGTGACCTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLHLAT*LVTSSS
Trigger: TGAGGACGAGGTCACAAGGCAGGTAGCCAAGTGTAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCGTGATGGTGAACCCTaGAGGGATCATTTTTCACTA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTRDGEP*RDHFSL
Trigger: TAGTGAAAAATGATCCCTGCAGGGTTCACCATCACG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAAGACTTGTCTAATTTaGTGGCAGGTGACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTKTCLI*WQVTSS
Trigger: AGAGGAGGTCACCTGCCAGCAAATTAGACAAGTCTT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTATTCTGAAGCAACTGTaGATGGCTCCTCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: YKKLTALRVGDTVPRLHIILKQL*MAPLKL
Trigger: GAGTTTGAGAGGAGCCATGCACAGTTGCTTCAGAAT...AATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp CAGCAGATGTCTTTGAGGACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGTATGTTCTTGGACTCTaGCTGAATCCTCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: QQMSLRTGKAFMISLGSLYVLGL*LNPLHH
Trigger: ATGATGCAGAGGATTCAGGCAGAGTCCAAGAACATA...CAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGTCCTCAAAGACATCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGCCCTGAGTTCAGGCTaGGGTGTAAGGTTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSALSSG*GVRFVQ
Trigger: TTGCACAAACCTTACACCCCAGCCTGAACTCAGGGC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGTACTTGCGCTGGATaGCATCTTTCAGATTCCTTA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDCTCAG*HLSDSL
Trigger: TAAGGAATCTGAAAGATGCCATCCAGCGCAAGTACA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATCATCGTCTTTGTAAATaGTTATCTCAATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: QRFELVTQFLGCTFSRHHHRLCK*LSQSVC
Trigger: ACAGACAGATTGAGATAACCATTTACAAAGACGATG...ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGAGCCTGAGAATATCTaGGATTCCTGGCTATCCTCC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLEPENI*DSWLSS
Trigger: GGAGGATAGCCAGGAATCCCAGATATTCTCAGGCTC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCGTCTTCCAATGCATaGAACACCTCTCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSSSNA*NTSLFS
Trigger: TGAGAAGAGAGAGGTGTTCCATGCATTGGAAGACGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCTCAAGCACTCGGATaGCCATGGATTCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSQALG*PWILRP
Trigger: TGGTCTCAGAATCCATGGCCATCCGAGTGCTTGAGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCCTTTCTAGGACTTTaGAAAACAAGGCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVAFLGL*KTRRRK
Trigger: TTTCCTCCGCCTTGTTTTCCAAAGTCCTAGAAAGGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGCCTTTCTAGGACTTTaGAAAACAAGGCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTAFLGL*KTRRRK
Trigger: TTTCCTCCGCCTTGTTTTCCAAAGTCCTAGAAAGGC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGTCACCAGCATCAATaGCTCCTTTATGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSHQHQ*LLYVTV
Trigger: CACTGTCACATAAAGGAGCCATTGATGCTGGTGACT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTACTGGCTTTCTCGGCTaGTGTCACACTCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLTGFLG*CHTLLC
Trigger: ACAGAGAAGAGTGTGACACCAGCCGAGAAAGCCAGT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTATGTCACTGACATTTTaGGTTTCACCCCCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTMSLTF*VSPPCS
Trigger: AGAACACGGGGGTGAAACCCAAAATGTCAGTGACAT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTACCAGTCTCTTTCTCTaGTCCTCCAGTGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSTSLFL*SSSEGV
Trigger: GACTCCCTCACTGGAGGACCAGAGAAAGAGACTGGT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTTTCCGGAGTGAACTaGAGAATGCCTGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVFSGVN*RMPAFP
Trigger: AGGAAAAGCAGGCATTCTCCAGTTCACTCCGGAAAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTACTTTCTCATACTGCTaGTTCAGATTCCCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTTFSYC*FRFPFV
Trigger: CACGAAGGGGAATCTGAACCAGCAGTATGAGAAAGT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTATGATCTTTCCGTGCTaGGCCTTGACTTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTMIFPC*ALTFSY
Trigger: GTATGAGAAAGTCAAGGCCCAGCACGGAAAGATCAT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAATGATCTTTCCGTGCTaGGCCTTGACTTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVMIFPC*ALTFSY
Trigger: GTATGAGAAAGTCAAGGCCCAGCACGGAAAGATCAT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCTTGCTGCAAGACTTaGCAGCGTCTATCACCCTGT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSCCKT*QRLSPC
Trigger: ACAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTGGATGTCATTCTTaGCAGGAAGCAGCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSGCHS*QEAASP
Trigger: AGGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCATCAAGCGTCTTCTaGATGTCATTCTTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSSSVF*MSFLAG
Trigger: TCCTGCCAAGAATGACATCCAGAAGACGCTTGATGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTGGTAAGCCATGGCTaGATATCTCTTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLVSHG*ISLSGG
Trigger: GCCTCCTGAAAGAGATATCCAGCCATGGCTTACCAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACAACGGGAACCTGCTTaGTTGTCTCTTTTATCCATG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVQREPA*LSLLSM
Trigger: CATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCAACGGGAACCTGCTTaGTTGTCTCTTTTATCCATG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTQREPA*LSLLSM
Trigger: CATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGCATCATTGCACTaGACTCTTCCTGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVTASLH*TLPEPF
Trigger: AAAAGGCTCAGGAAGAGTCCAGTGCAATGATGCAGT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCTGTGGTCTGGAACTaGGTTAGATTATTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSVVWN*VRLLED
Trigger: GTCCTCCAATAATCTAACCCAGTTCCAGACCACAGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGCCACTGTTTTAACTaGGCCTCTGTGGTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSHCFN*ASVVWN
Trigger: GTTCCAGACCACAGAGGCCCAGTTAAAACAGTGGCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTTCTCAGCAGGCTCTaGTACTGTGTGCTTTTGACG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLLSRL*YCVLLT
Trigger: CGTCAAAAGCACACAGTACCAGAGCCTGCTGAGAAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGAGACTGTCTTACTTTaGAGCTGCTCAGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLETVLL*SCSVTL
Trigger: CAGGGTCACTGAGCAGCTCCAAAGTAAGACAGTCTC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGAGACTGTCTTACTTTaGAGCTGCTCAGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLETVLL*SCSVTL
Trigger: CAGGGTCACTGAGCAGCTCCAAAGTAAGACAGTCTC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGCCTTTGGGTGTCTCTaGAGACTTCCTGAAATTCTT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTAFGCL*RLPEIL
Trigger: AAGAATTTCAGGAAGTCTCCAGAGACACCCAAAGGC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCCTTTGGGTGTCTCTaGAGACTTCCTGAAATTCTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVAFGCL*RLPEIL
Trigger: AAGAATTTCAGGAAGTCTCCAGAGACACCCAAAGGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACGAGACCCTGGAGCTTaGTTTCTAAGAAAGAACACT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVRDPGA*FLRKNT
Trigger: AGTGTTCTTTCTTAGAAACCAAGCTCCAGGGTCTCG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAACACATCAAGCTGCTaGTTGATTGTCTCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDNTSSC*LIVSVS
Trigger: AGAAACCGAGACAATCAACCAGCAGCTTGATGTGTT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGAGCCACTCGTTCAGTaGCTCCAGGGTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSEPLVQ*LQGLMK
Trigger: TTTCATGAGACCCTGGAGCCACTGAACGAGTGGCTC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACATCTTATCTATGTGTaGCTTGTGCTCGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVHLIYV*LVLGYQ
Trigger: CTGATAGCCGAGCACAAGCCACACATAGATAAGATG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCATCTTATCTATGTGTaGCTTGTGCTCGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTHLIYV*LVLGYQ
Trigger: CTGATAGCCGAGCACAAGCCACACATAGATAAGATG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATGTCATGAAACTGGGTaGACTGAGAAATGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVCHETG*TEKWPH
Trigger: ATGAGGCCATTTCTCAGTCCACCCAGTTTCATGACA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTATTCTGAGCTTGTACTaGAGGTTGCTTGCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTILSLY*RLLASS
Trigger: CGAAGAAGCAAGCAACCTCCAGTACAAGCTCAGAAT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGTTGTGGAAGTTCATaGCCAAGTGCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSCGSS*PSAGPP
Trigger: AGGAGGCCCTGCACTTGGCCATGAACTTCCACAACT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGGCTTTGATTTTGTCTaGATCGTTGGCGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVGFDFV*IVGDFQ
Trigger: CTGGAAATCGCCAACGATCCAGACAAAATCAAAGCC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGTCCAGTTCGGTTGGTaGTATCGTAGACAGAATGTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVVQFGW*YRRQNV
Trigger: AACATTCTGTCTACGATACCACCAACCGAACTGGAC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAACGTCCAGTTCGGTTaGTGGTATCGTAGACAGAAT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVNVQFG*WYRRQN
Trigger: ATTCTGTCTACGATACCACCAACCGAACTGGACGTT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCGTCTGCTTTGATATaGAGAGTGCACACACGGTCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLASALI*RVHTRS
Trigger: AGACCGTGTGTGCACTCTCCATATCAAAGCAGACGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGCATCCTCATCATCTaGGAGAGCACCATGGAAACG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSILII*ESTMET
Trigger: CGTTTCCATGGTGCTCTCCCAGATGATGAGGATGCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTACCTCTTCGATCTCCTaGGGGATAACTTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTTSSIS*GITSLS
Trigger: AGATAAGGAAGTTATCCCCCAGGAGATCGAAGAGGT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGTACGCATCTTTGTTTaGATGCAGAGCGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLVRIFV*MQSGHE
Trigger: TTCGTGGCCGCTCTGCATCCAAACAAAGATGCGTAC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACAACTTGGAATCGCTTaGCACACTTACACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVQLGIA*HTYTWL
Trigger: TAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAACTTGTCTAATTTGCTaGCAGGTGACCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLTCLIC*QVTSSG
Trigger: CCCAGAGGAGGTCACCTGCCAGCAAATTAGACAAGT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTGCGTGTTAAAGGATaGAGAATCTTGGGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLRVKG*RILGVL
Trigger: CAGCACACCCAAGATTCTCCATCCTTTAACACGCAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGCTGTTTGCCAACCATaGTTTACCATAATTGCGTGT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDAVCQP*FTIIAC
Trigger: ACACGCAATTATGGTAAACCATGGTTGGCAAACAGC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGCAGAGGAGGATCATCTTCCTGTaGGTCATCTGCTCTTCGATG +
Preference number: 4 (lower is better)
Translates to: KVSTKVKVNSDEHFAMQRRIIFL*VICSSM
Trigger: CATCGAAGAGCAGATGACCCACAGGAAGATGATCCT...CCTCTGCATAGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGCTTCCGAACCTTCATaGGATGCTGATTTATCCATT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTASEPS*DADLSI
Trigger: AATGGATAAATCAGCATCTCATGAAGGTTCGGAAGC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTTGCAAGGTTGCTTTaGACAGCAACAGTATTCATG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDFARLL*TATVFM
Trigger: CATGAATACTGTTGCTGTTCAAAGCAACCTTGCAAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTATCTCTGCTTCATTCTaGAACTGGACTCCCGACTCT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLISASF*NWTPDS
Trigger: AGAGTCGGGAGTCCAGTTTCAGAATGAAGCAGAGAT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAATCTCTGCTTCATTCTaGAACTGGACTCCCGACTCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLISASF*NWTPDS
Trigger: AGAGTCGGGAGTCCAGTTTCAGAATGAAGCAGAGAT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAAGAGTTTAGCGTACTaGCTCTCTAATCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTKSLAY*LSNLCN
Trigger: GTTGCACAGATTAGAGAGTCAGTACGCTAAACTCTT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTCCATTTAGCTCGATaGGAGTTGTTTGCCAAGACA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVFHLAR*ELFAKT
Trigger: TGTCTTGGCAAACAACTCTCATCGAGCTAAATGGAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTTCTAGCCTACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGAGAGTGAGTACACTCTaGTACTGTTGCTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: FLAYKKLTALRVGDTVPRRVSTL*YCCSIL
Trigger: CAGAATTGAGCAACAGTATCAGAGTGTACTCACTCT...CCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTAGGCTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTTCTGTCGATTTCATTaGCTAGATAGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: YKKLTALRVGDTVPRLHIFCRFH*LDSARR
Trigger: TCTCCTGGCACTATCTAGTCAATGAAATCGACAGAA...AATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTCTTTCTGCAGACTTaGGGAGCTCTTGATAATACT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLFLQT*GALDNT
Trigger: AGTATTATCAAGAGCTCCTCAAGTCTGCAGAAAGAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTTCTAGCCTACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTCTTTCTGCAGACTTaGGGAGCTCTTGATAATACT +
Preference number: 4 (lower is better)
Translates to: FLAYKKLTALRVGDTVPRLFLQT*GALDNT
Trigger: AGTATTATCAAGAGCTCCTCAAGTCTGCAGAAAGAG...CCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTAGGCTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGGTTTCGTAGAGTTTaGCAAGGGCTTCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLWFRRV*QGLLQL
Trigger: AAGCTGCAGAAGCCCTTGTCAAACTCTACGAAACCA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGCCGAGTACTGCTCTaGGTATTTCTGACACTCGTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSRVLL*VFLTLV
Trigger: GACGAGTGTCAGAAATACTCAGAGCAGTACTCGGCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCTACAGGAAAGCCCTaGGGGCAACATACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPTGKP*GQHTLF
Trigger: GAACAAAGTATGTTGCCCTCAGGGCTTTCCTGTAGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGGGTTCAGGGGACAGTaGTGTCCTTCTTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSGFRGQ*CPSLFL
Trigger: CAGAAACAAAGAAGGACATCACTGTCCCCTGAACCC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTGCTCAGTTCCTCATaGTGTCTTCTGGGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLLSSS*CLLGRS
Trigger: TGACCTTCCCAGAAGACATCATGAGGAACTGAGCAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTGTTGTTTGCTTTGTaGATTTCTGGTGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLLFAL*ISGAFR
Trigger: TCTGAAAGCACCAGAAATTCACAAAGCAAACAACAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCCTTAGACATTTGCTaGAACTGGTGTGAGCTCGCA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSLDIC*NWCELA
Trigger: TGCGAGCTCACACCAGTTTCAGCAAATGTCTAAGGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCCTTAGACATTTGCTaGAACTGGTGTGAGCTCGCA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSLDIC*NWCELA
Trigger: TGCGAGCTCACACCAGTTTCAGCAAATGTCTAAGGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTTTCCATCAATGACTaGTTCTCCTCCGTGACCGCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFSIND*FSSVTA
Trigger: AGCGGTCACGGAGGAGAATCAGTCATTGATGGAAAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTTGGAGCTGCTCAGTaGCCCTGTTTACCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLFGAAQ*PCLPFP
Trigger: TGGAAAAGGTAAACAGGGTCACTGAGCAGCTCCAAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTGTCTCTCTTGCACTTaGCTGGCAGCTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSCLSCT*LAASPF
Trigger: GAAAGGAGAAGCTGCCAGTCAAGTGCAAGAGAGACA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGGTCTTGCTCAAGTCTaGTGTCACCCAGAGACATTA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLGLAQV*CHPETL
Trigger: TAATGTCTCTGGGTGACATCAGACTTGAGCAAGACC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACAGGCAGCTGAGAGATaGTTCGTTGTGTTTCCGTTA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLQAAER*FVVFPL
Trigger: TAACGGAAACACAACGAATCATCTCTCAGCTGCCTG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACGTCAATGCTCTTCTTaGCAATGGGTTTGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLRQCSS*QWVCQA
Trigger: AGCCTGACAAACCCATTGTCAAGAAGAGCATTGACG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCATTTCCTGCTTTGTTaGCGGCTTCTACCGTGGACT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSHFLLC*RLLPWT
Trigger: AGTCCACGGTAGAAGCCGTCAACAAAGCAGGAAATG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTGTGCTCATCAATTTaGAACAAGATGGTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLCSSI*NKMVSK
Trigger: CTTGGACACCATCTTGTTTCAAATTGATGAGCACAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTACGACATCTTGTTTCTaGCTGAAATACTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTTTSCF*LKYFRW
Trigger: CCACCTGAAGTATTTCAGTCAGAAACAAGATGTCGT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACCTGCAGGGCATCTGTaGACTGTCCAGAAAATAACA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLPAGHL*TVQKIT
Trigger: TGTTATTTTCTGGACAGTTCACAGATGCCCTGCAGG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCCTGCAGGGCATCTGTaGACTGTCCAGAAAATAACA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLPAGHL*TVQKIT
Trigger: TGTTATTTTCTGGACAGTTCACAGATGCCCTGCAGG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTCTGGAAGACCTTGTaGTTATCGATCAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVFWKTL*LSIRFI
Trigger: GATGAACCTGATCGATAATCACAAGGTCTTCCAGAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTTTATGTTGCTCAATaGGAGTCCGGAGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLYVAQ*ESGEHP
Trigger: AGGATGCTCTCCGGACTCTCATTGAGCAACATAAAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCTGGTGTTCTGCAATaGGGGTTTTCACCTCTTCGA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSGVLQ*GFSPLR
Trigger: TCGAAGAGGTGAAAACCCTCATTGCAGAACACCAGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCACAGACTGGATTTCTaGAATGTCAAAGTCGGACGC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLHRLDF*NVKVGR
Trigger: GCGTCCGACTTTGACATTTCAGAAATCCAGTCTGTG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACACAGACTGGATTTCTaGAATGTCAAAGTCGGACGC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLHRLDF*NVKVGR
Trigger: GCGTCCGACTTTGACATTTCAGAAATCCAGTCTGTG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGGGAGTCTCCAAAGTaGTTTAAAATGAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDWESPK*FKMRNL
Trigger: CAGGTTTCTCATTTTAAATCACTTTGGAGACTCCCA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCAGTTTGTGAATGCTaGTGGACCTGTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPVCEC*WTCHSC
Trigger: ACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCAAAATGTTATTCTTGTCTaGTATAACTGCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLLWPPSCFRSMTNKQTQNVILV*YNCFLF
Trigger: GAAGAGGAAGCAGTTATAGCAGACAAGAATAACATT...TTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TTTCTAGCCTACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGATGGCTTTTGCTTTCTaGAACTCGTCTTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: FLAYKKLTALRVGDTVPRMAFAF*NSSSNA
Trigger: TGCATTGGAAGACGAGTTGCAGAAAGCAAAAGCCAT...CCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTAGGCTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTATGGCTTTTGCTTTCTaGAACTCGTCTTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTMAFAF*NSSSNA
Trigger: TGCATTGGAAGACGAGTTGCAGAAAGCAAAAGCCAT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTCGACAAGCTGGTCTaGCTTTTCTTTGTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFDKLV*LFFVPV
Trigger: GACTGGCACAAAGAAAAGGCAGACCAGCTTGTCGAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCGTCCATTTTGCTCTaGTTCACCTCTATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSSILL*FTSISD
Trigger: GTCTGAAATAGAGGTGAAGCAGAGCAAAATGGACGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGACACTCGTCCATTTTaGTCTGCTTCACCTCTATTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVDTRPF*SASPLF
Trigger: AAATAGAGGTGAAGCAGAGCAAAATGGACGAGTGTC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGGATTCTGAGACCATaGCCTGAGCCAGAGAATCAA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLWILRP*PEPENQ
Trigger: TTGATTCTCTGGCTCAGGGCATGGTCTCAGAATCCA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGTCAATCACCCCTTCTaGCACAGCTTCTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLVNHPF*HSFFNS
Trigger: ACTGTTGAAGAAGCTGTGGCAGAAGGGGTGATTGAC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGTGAGTGGACAGACTTaGTTCGTCTTCCTCATCAGC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSVSGQT*FVFLIS
Trigger: GCTGATGAGGAAGACGAAGCAAGTCTGTCCACTCAC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCCTGTGTACTTCCTTaGATATCTCTCTGTAATTCC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVACVLP*ISLCNS
Trigger: GGAATTACAGAGAGATATGCAAGGAAGTACACAGGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTTCTATCTTGGTTTTaGTCTCTTCCAGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTFLSWF*SLPAAS
Trigger: TGAGGCAGCTGGAAGAGAGCAAAACCAAGATAGAAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTCACAACGGGAACCTaGTTGGTTGTCTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTFTTGT*LVVSFI
Trigger: GATAAAAGAGACAACCAAGCAGGTTCCCGTTGTGAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCAAATGACTTGTTCTaGTCCACCTGCAACTTCACA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSNDLF*STCNFT
Trigger: TGTGAAGTTGCAGGTGGAGCAGAACAAGTCATTTGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCTTCCAGCTTTTGTTaGCTGTCCATGGTCAACTGG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSSSFC*LSMVNW
Trigger: CCAGTTGACCATGGACAGGCAACAAAAGCTGGAAGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGCAGAATCTGGACCTaGTGCTTCTGTGTGTTCAAC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSRIWT*CFCVFN
Trigger: GTTGAACACACAGAAGCAGCAGGTCCAGATTCTGCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGTCACAGCTTCCAGTTaGTCGTTCACAATCCCATGT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLVTASS*SFTIPC
Trigger: ACATGGGATTGTGAACGAGCAACTGGAAGCTGTGAC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGCCTTCTAGTTGTCTaGTCAGTTCTGCTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTCLLVV*SVLLSS
Trigger: ACTTGAAAGCAGAACTGAGCAGACAACTAGAAGGCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTGAGCAAGCCTTTTTaGCTCGTCTACCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLSKPF*LVYLLF
Trigger: AAACAGCAGGTAGACGAGGCAAAAAGGCTTGCTCAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGCATGCACGCCTTTTaGTTTCTCAGGGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCMHAF*FLRVSA
Trigger: TGCAGAAACCCTGAGAAAGCAAAAGGCGTGCATGCA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGCATGCACGCCTTTTaGTTTCTCAGGGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLCMHAF*FLRVSA
Trigger: TGCAGAAACCCTGAGAAAGCAAAAGGCGTGCATGCA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCAAAAAGGTCTGCATaGACGCCTTTTGCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSKRSA*TPFAFS
Trigger: TGAGAAAGCAAAAGGCGTGCATGCAGACCTTTTTGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAACCAGTTCACATCTTaGTGCTTCACCTGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLNQFTS*CFTCKG
Trigger: ACCCTTGCAGGTGAAGCAGCAAGATGTGAACTGGTT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCTTCCAGAAGTCTTTaGAGAAGCTTCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSSRSL*RSFCSC
Trigger: ACAGGAACAGAAGCTTCTGCAAAGACTTCTGGAAGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCTTGTAGAGCCTTGTaGTGTGAAATCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSCRAL*CEICSS
Trigger: GGAGGAGCAGATTTCACAGCACAAGGCTCTACAAGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGTAGAGGGTGTCGGCTaGCACATACTTTTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLVEGVG*HILFLD
Trigger: ATCCAAGAAAAGTATGTGGCAGCCGACACCCTCTAC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGTAGAGGGTGTCGGCTaGCACATACTTTTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLVEGVG*HILFLD
Trigger: ATCCAAGAAAAGTATGTGGCAGCCGACACCCTCTAC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTATTTTCACCAATCTaGTCCTTGATCTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLFSPI*SLIFST
Trigger: GGTGGAGAAGATCAAGGAGCAGATTGGTGAAAATAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGATGAGATCATTTCCTaGTTTGTTGACGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTDEIIS*FVDGFY
Trigger: GTAGAAGCCGTCAACAAAGCAGGAAATGATCTCATC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGCTTGTACTGGAGGTTaGTTGCTTCTTCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSACTGG*LLLRLH
Trigger: GTGAAGGCGAAGAAGCAAGCAACCTCCAGTACAAGC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCCCAGAGGTTTAGATaGCAAGAGATGACGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSQRFR*QEMTLC
Trigger: ACAGAGCGTCATCTCTTGGCATCTAAACCTCTGGGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTATATGTGCGTTAAGCTaGTCCTTGGCTGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSICALS*SLAVSG
Trigger: CCCAGAGACAGCCAAGGAGCAGCTTAACGCACATAT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTTCAGGTTGTCATCTaGCAGGGAGGTTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLQVVI*QGGFLL
Trigger: AAGGAGAAAACCTCCCTGGCAGATGACAACCTGAAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTACACTTGGCTACCTaGCTTGTGACCTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLHLAT*LVTSSS
Trigger: TGAGGACGAGGTCACAAGGCAGGTAGCCAAGTGTAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp ATGGATGACATCATTAATGTGTTGAATCTATTCAGTGAAAGGACTATGAAGGAGAGGTGCAGCTCGTCTTaGACCCTCTTCAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: MDDIINVLNLFSERTMKERCSSS*TLFSLS
Trigger: TGACAGGCTGAAGAGGGTGCAAGACGAGCTGCACCT...CTCCTTCATAGTCCTTTCACTGAATAGATTCAACACATTAATGATGTCATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTCCATCTCCTTTGGTaGGATTTCTTTCTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLHLLW*DFFLFE
Trigger: TTCAAAGAGAAAGAAATCCCACCAAAGGAGATGGAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTCCGACTCTAATCTTTTaGAATCAGACTGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: YKKLTALRVGDTVPRLHIPTLIF*NQTGEH
Trigger: ATGCTCTCCAGTCTGATTCCAAAAGATTAGAGTCGG...AATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGTTTGTGAATGCTGCTaGACCTGTCACAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLVCECC*TCHSCT
Trigger: AGTACAGCTGTGACAGGTCCAGCAGCATTCACAAAC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp ATTACAATCGCAGATGCCTTGACAGATGCTATTAGACAAAAGGAGAGAGCAAAAGCTCCTCCTTTTCCATaGACTCCTGGACAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: ITIADALTDAIRQKERAKAPPFP*TPGQGL
Trigger: AAGACCTTGTCCAGGAGTCCATGGAAAAGGAGGAGC...TTTTGCTCTCTCCTTTTGTCTAATAGCATCTGTCAAGGCATCTGCGATTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAACTGCTTCTTTGTTTaGTGGGGGAACAGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTNCFFV*WGNSKA
Trigger: TGCTTTACTGTTCCCCCACCAAACAAAGAAGCAGTT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAACTGCTTCTTTGTTTaGTGGGGGAACAGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVNCFFV*WGNSKA
Trigger: TGCTTTACTGTTCCCCCACCAAACAAAGAAGCAGTT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGTTGCTCAATTCTGTTaGCAAAGTCAACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDVAQFC*QSQLLL
Trigger: AAGAAGCAGTTGACTTTGCCAACAGAATTGAGCAAC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGAGCCTGAGAATATCTaGGATTCCTGGCTATCCTCC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSEPENI*DSWLSS
Trigger: GGAGGATAGCCAGGAATCCCAGATATTCTCAGGCTC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGCAGAGGTCGTCTTCCAATGCATaGAACACCTCTCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KVSTKVKVNSDEHFAMQRSSSNA*NTSLFS
Trigger: TGAGAAGAGAGAGGTGTTCCATGCATTGGAAGACGA...CCTCTGCATAGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCAGCCAACACTCTCTaGTCACTGGGTGACAAAGTA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSANTL*SLGDKV
Trigger: TACTTTGTCACCCAGTGACCAGAGAGTGTTGGCTGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTCCTACAGCTTGTaGGTTCAGGGGACAGTGATG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSFSYSL*VQGTVM
Trigger: CATCACTGTCCCCTGAACCCACAAGCTGTAGGAGAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATCACAAAGGCTTCCTaGTTACTAATTAGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDITKAS*LLIRRF
Trigger: AAACCGCCTAATTAGTAACCAGGAAGCCTTTGTGAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCCTCTTGCTTGGACTaGTACTTCTGTAACTCCACC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSSCLD*YFCNST
Trigger: GGTGGAGTTACAGAAGTACCAGTCCAAGCAAGAGGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGTAATTCCTCTTGCTTaGACTGGTACTTCTGTAACT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDVIPLA*TGTSVT
Trigger: AGTTACAGAAGTACCAGTCCAAGCAAGAGGAATTAC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTTGCTGCAAGACTTaGCAGCGTCTATCACCCTGT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSCCKT*QRLSPC
Trigger: ACAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCCTTTGCAGATTTTTaGGGTCCAAAGCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLAFADF*GPKQWA
Trigger: AGCCCATTGCTTTGGACCCCAAAAATCTGCAAAGGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGTCCTTGCAAAGCCTTaGTCTCTTCCAGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSVLAKP*SLPAAF
Trigger: AAAGGCAGCTGGAAGAGACCAAGGCTTTGCAAGGAC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCACCTTTTCGTTCATaGCATTTATGCTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSPFRS*HLCCFD
Trigger: GTCAAAGCAGCATAAATGCCATGAACGAAAAGGTGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGCCACTGTTTTAACTaGGCCTCTGTGGTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSHCFN*ASVVWN
Trigger: GTTCCAGACCACAGAGGCCCAGTTAAAACAGTGGCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGTGTTCAACATGTTTaGGTCAATGGACAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCVQHV*VNGQGA
Trigger: GGCCCCTTGTCCATTGACCCAAACATGTTGAACACA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTTGCAGCAGAATCTaGACCTGCTGCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSCSRI*TCCFCV
Trigger: CACACAGAAGCAGCAGGTCCAGATTCTGCTGCAAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTTCTCAGCAGGCTCTaGTACTGTGTGCTTTTGACG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLLSRL*YCVLLT
Trigger: CGTCAAAAGCACACAGTACCAGAGCCTGCTGAGAAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAACTCTCTGATTCAGTaGGATCCAGGGAGAACGTCA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLNSLIQ*DPGRTS
Trigger: TGACGTTCTCCCTGGATCCCACTGAATCAGAGAGTT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAAGTGGCCGAGACCCTaGAGCTTGGTTTCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLKWPRP*SLVSKK
Trigger: TTTCTTAGAAACCAAGCTCCAGGGTCTCGGCCACTT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTGTTCTTCAGCCTTCTaGAGCAGAGTGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSCSSAF*SRVENS
Trigger: GGAGTTCTCCACTCTGCTCCAGAAGGCTGAAGAACA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAACACATCAAGCTGCTaGTTGATTGTCTCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTNTSSC*LIVSVS
Trigger: AGAAACCGAGACAATCAACCAGCAGCTTGATGTGTT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTACGGAGGCTTTTGATTaGCCACAAGCTCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSTEAFD*PQAPLC
Trigger: ACACAGAGGAGCTTGTGGCCAATCAAAAGCCTCCGT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCCAGGTCTGTTCCAATaGGAGACATTGTGGCTAACT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLPGLFQ*ETLWLT
Trigger: AGTTAGCCACAATGTCTCCCATTGGAACAGACCTGG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCACTTAGCAAGCCTTTaGTGTGTGTCAGCCATGCGA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSHLASL*CVSAMR
Trigger: TCGCATGGCTGACACACACCAAAGGCTTGCTAAGTG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACCAGTTCAATCTCAATaGCTTTCGGGTCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLPVQSQ*LSGLLQ
Trigger: TTGGAGGAGACCCGAAAGCCATTGAGATTGAACTGG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCAGTTGATGAAGTCCTaGAGGGAGTTGTGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLQLMKS*RELWKF
Trigger: GAACTTCCACAACTCCCTCCAGGACTTCATCAACTG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAGAGTTTGCTCAGCCTaGGTAAGCCAGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLRVCSA*VSQLMK
Trigger: CTTCATCAACTGGCTTACCCAGGCTGAGCAAACTCT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTGTGCTGGACCAGCTaGGCTTTGATTTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLCWTS*ALILSG
Trigger: TCCAGACAAAATCAAAGCCCAGCTGGTCCAGCACAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTACTTGTCTAATTTGCTaGCAGGTGACCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSTCLIC*QVTSSG
Trigger: CCCAGAGGAGGTCACCTGCCAGCAAATTAGACAAGT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTTCTAGCCTACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGTATGCAAGTGTTCGTTaGTGTTCCGTAACTGATCCT +
Preference number: 4 (lower is better)
Translates to: FLAYKKLTALRVGDTVPRYASVR*CSVTDP
Trigger: AGGATCAGTTACGGAACACCAACGAACACTTGCATA...CCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTAGGCTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR CAA 72 bp ACTAGTCTTGTGGCTAGGCAAATATTACCCAGTGTCTaGGCTTCATATATAACCAGGGGTGACAAAGATGGT +
Preference number: 4 (lower is better)
Translates to: TSLVARQILPSV*ASYITRGDKDG
Trigger: ACCATCTTTGTCACCCCTGGTTATATATGAAGCCAAGACACTGGGTAATATTTGCCTAGCCACAAGACTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
3UTR CAA 72 bp ACCCTCCCTCCCACCTATTTATTTAGAGACAAGGTTTaGCTCTGGATCACAGAGTGGTTTCAAATGTATGAG +
Preference number: 4 (lower is better)
Translates to: TLPPTYLFRDKV*LWITEWFQMYE
Trigger: CTCATACATTTGAAACCACTCTGTGATCCAGAGCAAAACCTTGTCTCTAAATAAATAGGTGGGAGGGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGGTATTCAATCCATTTaGCTTCAACATCGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVGIQSI*LQHRLH
Trigger: GTGCAAACGATGTTGAAGTCAAATGGATTGAATACC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTATCTCTGCTTCATTCTaGAACTGGACTCCCGACTCT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSISASF*NWTPDS
Trigger: AGAGTCGGGAGTCCAGTTTCAGAATGAAGCAGAGAT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCTTTGAGTGATTCCTaGTATCATGAGCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLALSDS*YHELGL
Trigger: CAGACCAAGCTCATGATATCAGGAATCACTCAAAGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTTCTTTGGCATCATTaGAAAACTCGAAATAGGCAG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLLWHH*KTRNRQ
Trigger: CTGCCTATTTCGAGTTTTTCAATGATGCCAAAGAAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTCTTCATGTTTATGTaGGACTCATGCCAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLFMFM*DSCQRV
Trigger: CACTCTCTGGCATGAGTCTCACATAAACATGAAGAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAACTTATATCCGAGCCTaGGAATATCTGGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLTYIRA*EYLGFL
Trigger: CAGGAATCCCAGATATTCTCAGGCTCGGATATAAGT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTACTTATATCCGAGCCTaGGAATATCTGGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLTYIRA*EYLGFL
Trigger: CAGGAATCCCAGATATTCTCAGGCTCGGATATAAGT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTGGTTTCGTAGAGTTTaGCAAGGGCTTCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSWFRRV*QGLLQL
Trigger: AAGCTGCAGAAGCCCTTGTCAAACTCTACGAAACCA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGCTCTGAGTATTTCTaGCACTCGTCCATTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCSEYF*HSSILL
Trigger: GAGCAAAATGGACGAGTGTCAGAAATACTCAGAGCA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCTCTTAAAACTGCCTaGAAGACAGACAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPLKTA*KTDRTS
Trigger: AGAGGTCCTGTCTGTCTTTCAGGCAGTTTTAAGAGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGTAACAGGCTCACTTTaGCTTTTACAGCCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVVTGSL*LLQPLS
Trigger: ACTTAAAGGCTGTAAAAGTCAAAGTGAGCCTGTTAC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCTAACTGCTTCAGCTaGCTCTTCAAGGCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSNCFS*LFKASR
Trigger: TCTAGAAGCCTTGAAGAGTCAGCTGAAGCAGTTAGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCTAACTGCTTCAGCTaGCTCTTCAAGGCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSNCFS*LFKASR
Trigger: TCTAGAAGCCTTGAAGAGTCAGCTGAAGCAGTTAGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTGCTCAGTTCCTCATaGTGTCTTCTGGGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLLSSS*CLLGRS
Trigger: TGACCTTCCCAGAAGACATCATGAGGAACTGAGCAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGATCCACCAGGTCTTTaGGGTTATTTCCAAGAACAC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLDPPGL*GYFQEH
Trigger: GTGTTCTTGGAAATAACCTCAAAGACCTGGTGGATC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCATACTGCTGGTATTaGTCCACCAGGTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSYCWY*STRSLR
Trigger: CCTCAAAGACCTGGTGGATCAATACCAGCAGTATGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTTGCCAAGAAATCCTaGGTATTTGTGTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTFAKKS*VFVSVP
Trigger: AGGAACAGACACAAATACTCAGGATTTCTTGGCAAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTTGCTCTCTGTACTTaGGGGCTTTTTCCAACGAGT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLALCT*GLFPTS
Trigger: ACTCGTTGGAAAAAGCCCTCAAGTACAGAGAGCAAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGTTCTTTTGTATCCTaGAGCTGCCTTTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCSFVS*SCLWVS
Trigger: AGACACCCAAAGGCAGCTTCAGGATACAAAAGAACA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCACTGCTCACTTCATTaGGAGAATCCACTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLHCSLH*ENPLRL
Trigger: AAGCCTTAGTGGATTCTCTCAATGAAGTGAGCAGTG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCTTCTGTGTTTCAGTaGTCCAGGATAACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSSVFQ*SRITRH
Trigger: ATGCCGAGTTATCCTGGATCACTGAAACACAGAAGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCCCGGATGAAATCTTaGGTGTCTTTGATGGTAACG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSRMKS*VSLMVT
Trigger: CGTTACCATCAAAGACACTCAAGATTTCATCCGGGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTGTTGATAAGCTTCTaGCTTAAATTGCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLLISF*LKLLQL
Trigger: GAGCTGAAGCAATTTAAGTCAGAAGCTTATCAACAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTTCACTCGACTCGATaGGATCATTTCCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLHSTR*DHFLLC
Trigger: ACAAAGCAGGAAATGATCTCATCGAGTCGAGTGAAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTTCACTCGACTCGATaGGATCATTTCCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLHSTR*DHFLLC
Trigger: ACAAAGCAGGAAATGATCTCATCGAGTCGAGTGAAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGCTGCTGCTTTCTTTaGTCTGTCTTTTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSCCFL*SVFSKI
Trigger: TATTTTGGAAAAGACAGATCAAAGAAAGCAGCAGCT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTGTGCTCATCAATTTaGAACAAGATGGTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLCSSI*NKMVSK
Trigger: CTTGGACACCATCTTGTTTCAAATTGATGAGCACAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTGTGCTCATCAATTTaGAACAAGATGGTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLCSSI*NKMVSK
Trigger: CTTGGACACCATCTTGTTTCAAATTGATGAGCACAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAATGTTTGCCTCCGAGTaGTTTCTGAAACTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLMFASE*FLKLLV
Trigger: CACAAGGAGTTTCAGAAATCACTCGGAGGCAAACAT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTTTATGTTGCTCAATaGGAGTCCGGAGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLYVAQ*ESGEHP
Trigger: AGGATGCTCTCCGGACTCTCATTGAGCAACATAAAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTGGTGTTCTGCAATaGGGGTTTTCACCTCTTCGA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSGVLQ*GFSPLR
Trigger: TCGAAGAGGTGAAAACCCTCATTGCAGAACACCAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGGTCATTTCTTCCATaGAGGTCTGGTGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLWSFLP*RSGVLQ
Trigger: TTGCAGAACACCAGACCTTCATGGAAGAAATGACCA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGGTCATTTCTTCCATaGAGGTCTGGTGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLWSFLP*RSGVLQ
Trigger: TTGCAGAACACCAGACCTTCATGGAAGAAATGACCA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTTATTTCCAAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTTCTCCGTTTTCTGGATaGTCATGCTCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: FISKVSTKVKVNSDEHFASPFSG*SCSAGH
Trigger: GTGACCAGCAGAGCATGATCATCCAGAAAACGGAGA...AGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTTGGAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTATCGCTGATGGCTTTTaGTTTCTGCAACTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLIADGF*FLQLVF
Trigger: GAAGACGAGTTGCAGAAAGCAAAAGCCATCAGCGAT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCTGCCTTTTCTTTGTaGCAGTCAAAGTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSAFSL*QSKSRS
Trigger: GGACCTTGACTTTGACTGGCACAAAGAAAAGGCAGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp AAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGCAGAGGGACACTCGTCCATTTTaGTCTGCTTCACCTCTATTT +
Preference number: 4 (lower is better)
Translates to: KVSTKVKVNSDEHFAMQRDTRPF*SASPLF
Trigger: AAATAGAGGTGAAGCAGAGCAAAATGGACGAGTGTC...CCTCTGCATAGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGCAAATTTAATATACTaGGTCATAAGAGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDANLIY*VIRVTR
Trigger: CCTGGTCACTCTTATGACGCAGTATATTAAATTTGC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTACTGGACATCTGTTaGTTAGAGAAGAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLLDIC*LEKRGF
Trigger: GAAACCTCTCTTCTCTAAGCAACAGATGTCCAGTAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGAGCTTCTGAGAACTaGTCCTTCTTGGTTGATATT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTRASEN*SFLVDI
Trigger: AATATCAACCAAGAAGGAGCAGTTCTCAGAAGCTCT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTGATTGATGGTGCCTaGAATCACTTTATCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLIDGA*NHFIRL
Trigger: AAGCCGGATAAAGTGATTGCAGGCACCATCAATCAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATTCATGTCCCACTTTaGGTTTTCAAGAGACTCTTT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDIHVPL*VFKRLF
Trigger: AAAGAGTCTCTTGAAAACGCAAAGTGGGACATGAAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGTGTACTTGAGAACTaGTACACTCAGTATCTACAG +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSVLEN*YTQYLQ
Trigger: CTGTAGATACTGAGTGTAGCAGTTCTCAAGTACACT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGCCGTCGTTTCCAGCTaGATTTTGGTATGTGAAAGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSAVVSS*ILVCER
Trigger: CCTTTCACATACCAAAATGCAGCTGGAAACGACGGC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAATCCAAGAGTACCTCTaGGGTTTTCTTCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLIQEYL*GFLQLL
Trigger: GAGAAGCTGAAGAAAACCGCAGAGGTACTCTTGGAT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCTTTCAGGAGGCTGTaGAAAGCTTCGAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSFRRL*KASRSF
Trigger: GAAAGATCTCGAAGCTTTGCACAGCCTCCTGAAAGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTCTCAAGTCCTCTGTaGCAAGAGAAGGCTTCACAA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLFSSPL*QEKASQ
Trigger: TTGTGAAGCCTTCTCTTGGCACAGAGGACTTGAGAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAACTGGTTGAGCTCTTaGCACTTAGTGTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLNWLSS*HLVSIS
Trigger: AGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTGAGCAAGCCTTTTTaGCTCGTCTACCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLSKPF*LVYLLF
Trigger: AAACAGCAGGTAGACGAGGCAAAAAGGCTTGCTCAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGCTAACGTCTCCGCTTaGAACAACACATCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSANVSA*NNTSEV
Trigger: AACCTCTGATGTGTTGTTGCAAGCGGAGACGTTAGC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGCAGCTTGTTGCACTaGTTGCTCAAGGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSSLLH*LLKASK
Trigger: CTTAGAAGCCTTGAGCAAGCAGTGCAACAAGCTGCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTGTGGCTAACTTGTTaGCTGCGATGTCAACCCAGT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLWLTC*LRCQPS
Trigger: ACTGGGTTGACATCGCAGGCAACAAGTTAGCCACAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGACTGTGTGCTTGTCTaGCTCCTCTGTTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLDCVLV*LLCYFL
Trigger: AAGAAAGTAACAGAGGAGGCAGACAAGCACACAGTC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCCCAGAGGTTTAGATaGCAAGAGATGACGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSQRFR*QEMTLC
Trigger: ACAGAGCGTCATCTCTTGGCATCTAAACCTCTGGGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGAAGGTCTGGTGTTCTaGAATGAGGGTTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSEGLVF*NEGFHL
Trigger: GAGGTGAAAACCCTCATTGCAGAACACCAGACCTTC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAAGACTTGTCTAATTTaGTGGCAGGTGACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLKTCLI*WQVTSS
Trigger: AGAGGAGGTCACCTGCCAGCAAATTAGACAAGTCTT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GTGGTGCTCTGTGAGGTGCTCTTTCAGGATGTACAATGGATGACATCATTAATGGTTTTTGTCTGCTTATaGAAGTGTTCGTTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: VVLCEVLFQDVQWMTSLMVFVCL*KCSLVF
Trigger: GAACACCAACGAACACTTGCATAAGCAGACAAAAAC...CATTAATGATGTCATCCATTGTACATCCTGAAAGAGCACCTCACAGAGCACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp ATGGATGACATCATTAATGTGTTGAATCTATTCAGTGAAAGGACTATGAAGGAGAGCTTCGCGTTCTCTTaGGCCCGGAAGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: MDDIINVLNLFSERTMKESFAFS*ARKFSL
Trigger: GAGAGAAAACTTCCGGGCGCAAGAGAACGCGAAGCT...CTCCTTCATAGTCCTTTCACTGAATAGATTCAACACATTAATGATGTCATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TTTATTTCCAAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTGAAAGACTCTCGTGTTaGTGGACGGTTCATGCAGGA +
Preference number: 4 (lower is better)
Translates to: FISKVSTKVKVNSDEHFAERLSC*WTVHAG
Trigger: TCCTGCATGAACCGTCCAGCAACACGAGAGTCTTTC...AGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTTGGAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGACATAGTGACCACGTaGTGTCTAATCCACTGGATG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSDIVTT*CLIHWM
Trigger: CATCCAGTGGATTAGACACCACGTGGTCACTATGTC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCAGCTGTACTTGCGCTaGATGGCATCTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSQLYLR*MASFRF
Trigger: GAATCTGAAAGATGCCATCCAGCGCAAGTACAGCTG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTTTCCATGGACTCCTaGACAAGGTCTTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFSMDS*TRSSSL
Trigger: CAAACTGGAAGACCTTGTCCAGGAGTCCATGGAAAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTTGCTCAATTCTGTTaGCAAAGTCAACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVAQFC*QSQLLL
Trigger: AAGAAGCAGTTGACTTTGCCAACAGAATTGAGCAAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCGTCTTCCAATGCATaGAACACCTCTCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSSSNA*NTSLFS
Trigger: TGAGAAGAGAGAGGTGTTCCATGCATTGGAAGACGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGAAATCAAGTTCTGTTaGAAAGCCTGTTGTAAGGTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTEIKFC*KACCKV
Trigger: GACCTTACAACAGGCTTTCCAACAGAACTTGATTTC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAATATTTCACCAGAGTaGGGCCAGATGAGTCCAACG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSNISPE*GQMSPT
Trigger: CGTTGGACTCATCTGGCCCCACTCTGGTGAAATATT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAAGAGAGCCACCTCTTaGCATTTTTACAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVKRATS*HFYNLP
Trigger: TGGAAGATTGTAAAAATGCCAAGAGGTGGCTCTCTT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAATGTCACTGACATTTTaGGTTTCACCCCCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLMSLTF*VSPPCS
Trigger: AGAACACGGGGGTGAAACCCAAAATGTCAGTGACAT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGTGGTAAGTTCTGGATaGCTGCTTCTTTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSVVSSG*LLLSVS
Trigger: GGACACAGAAAGAAGCAGCCATCCAGAACTTACCAC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTTTCCGGAGTGAACTaGAGAATGCCTGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFSGVN*RMPAFP
Trigger: AGGAAAAGCAGGCATTCTCCAGTTCACTCCGGAAAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTTCTTCTGCCATCTTaGGAACAGCACATGATGTTT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTFLLPS*EQHMMF
Trigger: AAACATCATGTGCTGTTCCCAAGATGGCAGAAGAAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTTCCAGCTGCATTTTaGTATGTGAAAGGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTFPAAF*YVKGLL
Trigger: TAGCAGACCTTTCACATACCAAAATGCAGCTGGAAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTAATTCCTCTTGCTTaGACTGGTACTTCTGTAACT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVIPLA*TGTSVT
Trigger: AGTTACAGAAGTACCAGTCCAAGCAAGAGGAATTAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAACTTTCTCATACTGCTaGTTCAGATTCCCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLTFSYC*FRFPFV
Trigger: CACGAAGGGGAATCTGAACCAGCAGTATGAGAAAGT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTATGATCTTTCCGTGCTaGGCCTTGACTTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLMIFPC*ALTFSY
Trigger: GTATGAGAAAGTCAAGGCCCAGCACGGAAAGATCAT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGCCTTTGCAGATTTTTaGGGTCCAAAGCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSAFADF*GPKQWA
Trigger: AGCCCATTGCTTTGGACCCCAAAAATCTGCAAAGGC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGTTCGTTCACACACTTaGACAGATCATCGTATCTCC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLVRSHT*TDHRIS
Trigger: GGAGATACGATGATCTGTCCAAGTGTGTGAACGAAC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCAACGGGAACCTGCTTaGTTGTCTCTTTTATCCATG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLQREPA*LSLLSM
Trigger: CATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTTTTGACGATAGCCTaGTCAATCCAGTCGCATCTG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLLTIA*SIQSHL
Trigger: CAGATGCGACTGGATTGACCAGGCTATCGTCAAAAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCGTCAAGCCATGCTTaGAAATCCTTAGACATTTGC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLASSHA*KSLDIC
Trigger: GCAAATGTCTAAGGATTTCCAAGCATGGCTTGACGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTGCTCTTCTTTCTTaGCGTCAAGCCATGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSALLS*RQAMLG
Trigger: TCCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCCCAGTCTGTTTTCATaGTGTTCAGCTGCAACTGTA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLPSLFS*CSAATV
Trigger: TACAGTTGCAGCTGAACACCATGAAAACAGACTGGG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCCAGCATACCAAAGTaGTGGTCCATTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSSIPK*WSISFC
Trigger: GCAGAAGGAAATGGACCACCACTTTGGTATGCTGGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACGAGACCCTGGAGCTTaGTTTCTAAGAAAGAACACT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLRDPGA*FLRKNT
Trigger: AGTGTTCTTTCTTAGAAACCAAGCTCCAGGGTCTCG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCATCTTATCTATGTGTaGCTTGTGCTCGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLHLIYV*LVLGYQ
Trigger: CTGATAGCCGAGCACAAGCCACACATAGATAAGATG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGTCATGAAACTGGGTaGACTGAGAAATGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCHETG*TEKWPH
Trigger: ATGAGGCCATTTCTCAGTCCACCCAGTTTCATGACA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCAGTTCAATCTCAATaGCTTTCGGGTCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPVQSQ*LSGLLQ
Trigger: TTGGAGGAGACCCGAAAGCCATTGAGATTGAACTGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTATTCTGAGCTTGTACTaGAGGTTGCTTGCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLILSLY*RLLASS
Trigger: CGAAGAAGCAAGCAACCTCCAGTACAAGCTCAGAAT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCAGTTGATGAAGTCCTaGAGGGAGTTGTGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSQLMKS*RELWKF
Trigger: GAACTTCCACAACTCCCTCCAGGACTTCATCAACTG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGAGTTTGCTCAGCCTaGGTAAGCCAGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSRVCSA*VSQLMK
Trigger: CTTCATCAACTGGCTTACCCAGGCTGAGCAAACTCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTGAAATACTTCAGGTaGGTTCCAGTCTTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLKYFR*VPVLSN
Trigger: GTTGGACAAGACTGGAACCCACCTGAAGTATTTCAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTGTGCTGGACCAGCTaGGCTTTGATTTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLCWTS*ALILSG
Trigger: TCCAGACAAAATCAAAGCCCAGCTGGTCCAGCACAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGTCCAGTTCGGTTGGTaGTATCGTAGACAGAATGTT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLVQFGW*YRRQNV
Trigger: AACATTCTGTCTACGATACCACCAACCGAACTGGAC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGTCCAGTTCGGTTGGTaGTATCGTAGACAGAATGTT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLVQFGW*YRRQNV
Trigger: AACATTCTGTCTACGATACCACCAACCGAACTGGAC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGTCGAAATCGAAGTTaGCAAATTCCCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLCRNRS*QIPSAP
Trigger: AGGAGCTGAGGGAATTTGCCAACTTCGATTTCGACA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACAACTTGGAATCGCTTaGCACACTTACACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLQLGIA*HTYTWL
Trigger: TAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCTGAGCACACAGACTaGATTTCTGAAATGTCAAAG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSEHTD*ISEMSK
Trigger: CTTTGACATTTCAGAAATCCAGTCTGTGTGCTCAGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp ATGGATGACATCATTAATGTGTTGAATCTATTCAGTGAAAGGACTATGAAGGAGGCTCGGGGAAGCCTCTaGCTCTACGCTTTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: MDDIINVLNLFSERTMKEARGSL*LYAFLK
Trigger: CTTAAGAAAAGCGTAGAGCCAGAGGCTTCCCCGAGC...CTCCTTCATAGTCCTTTCACTGAATAGATTCAACACATTAATGATGTCATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp AAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGCAGAGGTGTGCAAATCCTTCTTaGGAACTACCTTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: KVSTKVKVNSDEHFAMQRCANPS*ELPCSE
Trigger: TTCTGAGCAAGGTAGTTCCCAAGAAGGATTTGCACA...CCTCTGCATAGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR CAA 72 bp CGCTGCCTTTACATTAGCATTACAATCGCAGATGCCTaGACAGATGCTATTAGACAAAAGGAGAGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: RCLYISITIADA*TDAIRQKERAK
Trigger: TTTTGCTCTCTCCTTTTGTCTAATAGCATCTGTCAAGGCATCTGCGATTGTAATGCTAATGTAAAGGCAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp ATTACAATCGCAGATGCCTTGACAGATGCTATTAGACAAAAGGAGAGAGCAAAAGCTTTGAGTGATTCCTaGTATCATGAGCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: ITIADALTDAIRQKERAKALSDS*YHELGL
Trigger: CAGACCAAGCTCATGATATCAGGAATCACTCAAAGC...TTTTGCTCTCTCCTTTTGTCTAATAGCATCTGTCAAGGCATCTGCGATTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAGAGTGAGTACACTCTaGTACTGTTGCTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLRVSTL*YCCSIL
Trigger: CAGAATTGAGCAACAGTATCAGAGTGTACTCACTCT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTCTTCATGTTTATGTaGGACTCATGCCAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLFMFM*DSCQRV
Trigger: CACTCTCTGGCATGAGTCTCACATAAACATGAAGAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTCTTTCTGCAGACTTaGGGAGCTCTTGATAATACT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLFLQT*GALDNT
Trigger: AGTATTATCAAGAGCTCCTCAAGTCTGCAGAAAGAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTCCCAGGGTCTTGCTaGTATTTGATACCCATTTCT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLPGSC*YLIPIS
Trigger: AGAAATGGGTATCAAATATCAGCAAGACCCTGGGAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTTTTTAGTTTGTTCTaGGCTCTGAGCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLFSLF*ALSCDW
Trigger: CCAGTCACAGCTCAGAGCTCAGAACAAACTAAAAAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCCTGGAGATTCATATaGACTTTGTCTAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSWRFI*TLSKLL
Trigger: AAGCAGTTTAGACAAAGTTCATATGAATCTCCAGGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACAACTATTTTATCCTTaGGTAAGAGGCCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLQLFYP*VRGPGL
Trigger: AAGACCTGGGCCTCTTACTCAAGGATAAAATAGTTG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACCAACTTATCTTGAATaGTTAAGACTTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVPTYLE*LRLHHL
Trigger: CAGGTGATGAAGTCTTAATCATTCAAGATAAGTTGG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCCCGGATGAAATCTTaGGTGTCTTTGATGGTAACG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSRMKS*VSLMVT
Trigger: CGTTACCATCAAAGACACTCAAGATTTCATCCGGGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTGTTGATAAGCTTCTaGCTTAAATTGCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLLISF*LKLLQL
Trigger: GAGCTGAAGCAATTTAAGTCAGAAGCTTATCAACAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTGTTGATAAGCTTCTaGCTTAAATTGCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLLISF*LKLLQL
Trigger: GAGCTGAAGCAATTTAAGTCAGAAGCTTATCAACAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGCTGCTGCTTTCTTTaGTCTGTCTTTTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSCCFL*SVFSKI
Trigger: TATTTTGGAAAAGACAGATCAAAGAAAGCAGCAGCT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTCTTTCAGGTTGGTaGTGTCTTGGTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSLSGW*CLGQCW
Trigger: CCAACATTGACCAAGACATCACCAACCTGAAAGAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTACGACATCTTGTTTCTaGCTGAAATACTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLTTSCF*LKYFRW
Trigger: CCACCTGAAGTATTTCAGTCAGAAACAAGATGTCGT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAATCCAGAGATTTTTCTaGCTCTTCCAGCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLIQRFF*LFQPFH
Trigger: ATGGAATGGCTGGAAGAGTCAGAAAAATCTCTGGAT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGTTTGCTGTGATTGGTaGTGTCATCTTCTAAGACCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLVCCDW*CHLLRP
Trigger: AGGTCTTAGAAGATGACATCACCAATCACAGCAAAC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTTGATAATACTTCCTaGACACACTCACTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLDNTS*THSLPF
Trigger: AAAAGGAAGTGAGTGTGTGCAGGAAGTATTATCAAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTACACAGATTCCTCTTaGTCCTCTCTTTCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSYTDSS*SSLSAD
Trigger: GTCTGCAGAAAGAGAGGAGCAAGAGGAATCTGTGTA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTATGGCTTTTGCTTTCTaGAACTCGTCTTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLMAFAF*NSSSNA
Trigger: TGCATTGGAAGACGAGTTGCAGAAAGCAAAAGCCAT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCGTCCATTTTGCTCTaGTTCACCTCTATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSSILL*FTSISD
Trigger: GTCTGAAATAGAGGTGAAGCAGAGCAAAATGGACGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCGTCCATTTTGCTCTaGTTCACCTCTATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSSILL*FTSISD
Trigger: GTCTGAAATAGAGGTGAAGCAGAGCAAAATGGACGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGACACTCGTCCATTTTaGTCTGCTTCACCTCTATTT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLDTRPF*SASPLF
Trigger: AAATAGAGGTGAAGCAGAGCAAAATGGACGAGTGTC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTATCCTGGTATTTTCCTaGAAAATACTCCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTILVFS*KILLCT
Trigger: GGTACAAAGGAGTATTTTGCAGGAAAATACCAGGAT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTTGTAATCAACTCTTaGTGTAAGGAAGATGATGTG +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDFVINS*CKEDDV
Trigger: CACATCATCTTCCTTACAGCAAGAGTTGATTACAAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCATTTCAGAGTTGATTaGAAGCTTGATCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDHFRVD*KLDQFH
Trigger: ATGAAACTGATCAAGCTTGCAATCAACTCTGAAATG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAACCTCGTTCAGTTTCTaGTCAATCAAAGCTCTATCC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLTSFSF*SIKALS
Trigger: GGATAGAGCTTTGATTGAGCAGAAACTGAACGAGGT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTTCTATCTTGGTTTTaGTCTCTTCCAGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLFLSWF*SLPAAS
Trigger: TGAGGCAGCTGGAAGAGAGCAAAACCAAGATAGAAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTTTCAGGAGGCTGTaGAAAGCTTCGAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSFRRL*KASRSF
Trigger: GAAAGATCTCGAAGCTTTGCACAGCCTCCTGAAAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTCACAACGGGAACCTaGTTGGTTGTCTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFTTGT*LVVSFI
Trigger: GATAAAAGAGACAACCAAGCAGGTTCCCGTTGTGAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAATCTTCTCTAACCACTaGATCATTGCACTGGACTCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLIFSNH*IIALDS
Trigger: AGAGTCCAGTGCAATGATGCAGTGGTTAGAGAAGAT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCAAATGACTTGTTCTaGTCCACCTGCAACTTCACA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSNDLF*STCNFT
Trigger: TGTGAAGTTGCAGGTGGAGCAGAACAAGTCATTTGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGCCTTCTAGTTGTCTaGTCAGTTCTGCTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCLLVV*SVLLSS
Trigger: ACTTGAAAGCAGAACTGAGCAGACAACTAGAAGGCA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTGCCAAAGTCTTTCTaGGAGTTAAGTAACGACTCC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLPKSF*ELSNDS
Trigger: GGAGTCGTTACTTAACTCGCAGAAAGACTTTGGCAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTGCCAAAGTCTTTCTaGGAGTTAAGTAACGACTCC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLPKSF*ELSNDS
Trigger: GGAGTCGTTACTTAACTCGCAGAAAGACTTTGGCAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCAAAAAGGTCTGCATaGACGCCTTTTGCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSKRSA*TPFAFS
Trigger: TGAGAAAGCAAAAGGCGTGCATGCAGACCTTTTTGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTTCTTGGATATAAATaGCTTCCTTTGGGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTFLGYK*LPLGSV
Trigger: AACTGAGCCCAAAGGAAGGCATTTATATCCAAGAAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGACTGTGTGCTTGTCTaGCTCCTCTGTTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSDCVLV*LLCYFL
Trigger: AAGAAAGTAACAGAGGAGGCAGACAAGCACACAGTC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGATGAGATCATTTCCTaGTTTGTTGACGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLDEIIS*FVDGFY
Trigger: GTAGAAGCCGTCAACAAAGCAGGAAATGATCTCATC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCGTGATGGTGAACCCTaGAGGGATCATTTTTCACTA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSRDGEP*RDHFSL
Trigger: TAGTGAAAAATGATCCCTGCAGGGTTCACCATCACG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGGGAGTTGACATTTTaGTGTTTGCCAACCATGGTT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLRELTF*CLPTMV
Trigger: AACCATGGTTGGCAAACAGCAAAATGTCAACTCCCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp ATTACAATCGCAGATGCCTTGACAGATGCTATTAGACAAAAGGAGAGAGCAAAATGGATGATCATGCTCTaGTGGTCACACTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: ITIADALTDAIRQKERAKWMIML*WSHFCL
Trigger: CAAGCAAAAGTGTGACCAGCAGAGCATGATCATCCA...TTTTGCTCTCTCCTTTTGTCTAATAGCATCTGTCAAGGCATCTGCGATTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTTCTCCATCTCCTTTaGTGGGATTTCTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVFLHLL*WDFFLF
Trigger: AAAGAGAAAGAAATCCCACCAAAGGAGATGGAGAAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCCGACTCTAATCTTTTaGAATCAGACTGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLPTLIF*NQTGEH
Trigger: ATGCTCTCCAGTCTGATTCCAAAAGATTAGAGTCGG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGTACTTGCGCTGGATaGCATCTTTCAGATTCCTTA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCTCAG*HLSDSL
Trigger: TAAGGAATCTGAAAGATGCCATCCAGCGCAAGTACA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp ATTACAATCGCAGATGCCTTGACAGATGCTATTAGACAAAAGGAGAGAGCAAAATTTTCCATGGACTCCTaGACAAGGTCTTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: ITIADALTDAIRQKERAKFSMDS*TRSSSL
Trigger: CAAACTGGAAGACCTTGTCCAGGAGTCCATGGAAAA...TTTTGCTCTCTCCTTTTGTCTAATAGCATCTGTCAAGGCATCTGCGATTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCATCGTCTTTGTAAATaGTTATCTCAATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDHRLCK*LSQSVC
Trigger: ACAGACAGATTGAGATAACCATTTACAAAGACGATG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAACTGCTTCTTTGTTTaGTGGGGGAACAGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLNCFFV*WGNSKA
Trigger: TGCTTTACTGTTCCCCCACCAAACAAAGAAGCAGTT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp AAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGCAGAGGGTTGCTCAATTCTGTTaGCAAAGTCAACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KVSTKVKVNSDEHFAMQRVAQFC*QSQLLL
Trigger: AAGAAGCAGTTGACTTTGCCAACAGAATTGAGCAAC...CCTCTGCATAGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCGTCTTCCAATGCATaGAACACCTCTCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSSSNA*NTSLFS
Trigger: TGAGAAGAGAGAGGTGTTCCATGCATTGGAAGACGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGTAATCATGAACTGTaGATGGCTGGAGTTTACAAA +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTCNHEL*MAGVYK
Trigger: TTTGTAAACTCCAGCCATCCACAGTTCATGATTACA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCATCAAGCGTCTTCTaGATGTCATTCTTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSSSVF*MSFLAG
Trigger: TCCTGCCAAGAATGACATCCAGAAGACGCTTGATGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGTTCGTTCACACACTTaGACAGATCATCGTATCTCC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSVRSHT*TDHRIS
Trigger: GGAGATACGATGATCTGTCCAAGTGTGTGAACGAAC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGCTTTGTGAATTTCTaGTGCTTTCAGATTCCACTT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTCFVNF*CFQIPL
Trigger: AAGTGGAATCTGAAAGCACCAGAAATTCACAAAGCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATGCTTTGTGAATTTCTaGTGCTTTCAGATTCCACTT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVCFVNF*CFQIPL
Trigger: AAGTGGAATCTGAAAGCACCAGAAATTCACAAAGCA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTGTGGTCTGGAACTaGGTTAGATTATTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSVVWN*VRLLED
Trigger: GTCCTCCAATAATCTAACCCAGTTCCAGACCACAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCCAGTCTGTTTTCATaGTGTTCAGCTGCAACTGTA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPSLFS*CSAATV
Trigger: TACAGTTGCAGCTGAACACCATGAAAACAGACTGGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGCCTTTGGGTGTCTCTaGAGACTTCCTGAAATTCTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSAFGCL*RLPEIL
Trigger: AAGAATTTCAGGAAGTCTCCAGAGACACCCAAAGGC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAACACATCAAGCTGCTaGTTGATTGTCTCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLNTSSC*LIVSVS
Trigger: AGAAACCGAGACAATCAACCAGCAGCTTGATGTGTT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTGTCATGAAACTGGGTaGACTGAGAAATGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSCHETG*TEKWPH
Trigger: ATGAGGCCATTTCTCAGTCCACCCAGTTTCATGACA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACAGATGAAAACCATTTaGTCCAACTTATCCTGTACA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVQMKTI*SNLSCT
Trigger: TGTACAGGATAAGTTGGACCAAATGGTTTTCATCTG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGGCTTTGATTTTGTCTaGATCGTTGGCGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSGFDFV*IVGDFQ
Trigger: CTGGAAATCGCCAACGATCCAGACAAAATCAAAGCC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTGTCGAAATCGAAGTTaGCAAATTCCCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSCRNRS*QIPSAP
Trigger: AGGAGCTGAGGGAATTTGCCAACTTCGATTTCGACA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCAACTTGGAATCGCTTaGCACACTTACACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSQLGIA*HTYTWL
Trigger: TAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTTATTTCCAAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTTGCTATTCTCAACCATaGTTGCTCTCTGACGCTGCA +
Preference number: 4 (lower is better)
Translates to: FISKVSTKVKVNSDEHFACYSQP*LLSDAA
Trigger: TGCAGCGTCAGAGAGCAACCATGGTTGAGAATAGCA...AGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTTGGAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGCTTCCGAACCTTCATaGGATGCTGATTTATCCATT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSASEPS*DADLSI
Trigger: AATGGATAAATCAGCATCTCATGAAGGTTCGGAAGC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCCGGCCTGTATTTATaGATGATGGCATTGAATAGT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSGLYL*MMALNS
Trigger: ACTATTCAATGCCATCATTCATAAATACAGGCCGGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTTGCAAGGTTGCTTTaGACAGCAACAGTATTCATG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFARLL*TATVFM
Trigger: CATGAATACTGTTGCTGTTCAAAGCAACCTTGCAAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGGTATTCAATCCATTTaGCTTCAACATCGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLGIQSI*LQHRLH
Trigger: GTGCAAACGATGTTGAAGTCAAATGGATTGAATACC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCCTGAGTTTAAGCTTTaGGTGATTCCTGATATCATG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLPEFKL*VIPDIM
Trigger: CATGATATCAGGAATCACTCAAAGCTTAAACTCAGG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTGTCGATTTCATTaGCTAGATAGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSFCRFH*LDSARR
Trigger: TCTCCTGGCACTATCTAGTCAATGAAATCGACAGAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGTAACAGGCTCACTTTaGCTTTTACAGCCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLVTGSL*LLQPLS
Trigger: ACTTAAAGGCTGTAAAAGTCAAAGTGAGCCTGTTAC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTGTTGTTTGCTTTGTaGATTTCTGGTGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLLFAL*ISGAFR
Trigger: TCTGAAAGCACCAGAAATTCACAAAGCAAACAACAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCTCTGGAGACTTCCTaGAATTCTTTAAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSLETS*NSLNFW
Trigger: CCAGAAGTTTAAAGAATTTCAGGAAGTCTCCAGAGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCAGCTTTTTCTTCATTaGCTGCTTCTCCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSQLFLH*LLLLFT
Trigger: AGTGAAGAGGAGAAGCAGTCAATGAAGAAAAAGCTG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTGTGCTCATCAATTTaGAACAAGATGGTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLCSSI*NKMVSK
Trigger: CTTGGACACCATCTTGTTTCAAATTGATGAGCACAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCATCTTGTTTCTGACTaGAATACTTCAGGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSHLVSD*NTSGGF
Trigger: GAACCCACCTGAAGTATTTCAGTCAGAAACAAGATG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTACGACATCTTGTTTCTaGCTGAAATACTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSTTSCF*LKYFRW
Trigger: CCACCTGAAGTATTTCAGTCAGAAACAAGATGTCGT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTATCCAGAGATTTTTCTaGCTCTTCCAGCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSIQRFF*LFQPFH
Trigger: ATGGAATGGCTGGAAGAGTCAGAAAAATCTCTGGAT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTGGAAGACCTTGTaGTTATCGATCAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSFWKTL*LSIRFI
Trigger: GATGAACCTGATCGATAATCACAAGGTCTTCCAGAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTGCTTTACAGGGAGTTaGCATTTTGCTGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSCFTGS*HFAVCQ
Trigger: TTGGCAAACAGCAAAATGTCAACTCCCTGTAAAGCA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGTACATCAATCACATaGTGGCGTAAAAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCTSIT*WRKRFS
Trigger: TGAGAACCTTTTACGCCAGCATGTGATTGATGTACA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTACTGGACATCTGTTaGTTAGAGAAGAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLLDIC*LEKRGF
Trigger: GAAACCTCTCTTCTCTAAGCAACAGATGTCCAGTAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGAGCTTCTGAGAACTaGTCCTTCTTGGTTGATATT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLRASEN*SFLVDI
Trigger: AATATCAACCAAGAAGGAGCAGTTCTCAGAAGCTCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAGAGCTTCTGAGAACTaGTCCTTCTTGGTTGATATT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLRASEN*SFLVDI
Trigger: AATATCAACCAAGAAGGAGCAGTTCTCAGAAGCTCT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCTTTGCAAGTGTCTTaGCTTTCTAGGACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSLQVS*LSRTLE
Trigger: TTCCAAAGTCCTAGAAAGGCAAGACACTTGCAAAGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAGTGTACTTGAGAACTaGTACACTCAGTATCTACAG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSVLEN*YTQYLQ
Trigger: CTGTAGATACTGAGTGTAGCAGTTCTCAAGTACACT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGGTGTCAAATATTTCTaGAAGAGTCTCAAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSGVKYF*KSLKQD
Trigger: GTCCTGCTTGAGACTCTTGCAGAAATATTTGACACC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTTGTGAATTTCTGGTaGTTTCAGATTCCACTTTTC +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTFVNFW*FQIPLF
Trigger: GAAAAGTGGAATCTGAAAGCACCAGAAATTCACAAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTGTCTGCTCAGTTCTaGTTTCAAGTACTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLSAQF*FQVLLF
Trigger: AAAGAGGAGTACTTGAAAGCAGAACTGAGCAGACAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTTCCAGAAGTCTTTaGAGAAGCTTCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSSRSL*RSFCSC
Trigger: ACAGGAACAGAAGCTTCTGCAAAGACTTCTGGAAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGTGGTCATGATTTTATaGCCAGACGTAACAAGTTCA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLVVMIL*PDVTSS
Trigger: TGAACTTGTTACGTCTGGGCATAAAATCATGACCAC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCTTCTGACTTAAATTaGTTCAGCTCTTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLASDLN*FSSSIC
Trigger: GCAGATTGAAGAGCTGAAGCAATTTAAGTCAGAAGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAATGGTTTACCATAATTaGGTGTTAAAGGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVMVYHN*VLKDGE
Trigger: TTCTCCATCCTTTAACACGCAATTATGGTAAACCAT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGGGAGTTGACATTTTaGTGTTTGCCAACCATGGTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSRELTF*CLPTMV
Trigger: AACCATGGTTGGCAAACAGCAAAATGTCAACTCCCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTTCTAGCCTACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGTTATCTGCAGTTCAGTaGTTGTCTGAGAAAAATACT +
Preference number: 4 (lower is better)
Translates to: FLAYKKLTALRVGDTVPRLSAVQ*LSEKNT
Trigger: AGTATTTTTCTCAGACAAGCACTGAACTGCAGATAA...CCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTAGGCTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTCCATCTCCTTTGGTaGGATTTCTTTCTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLHLLW*DFFLFE
Trigger: TTCAAAGAGAAAGAAATCCCACCAAAGGAGATGGAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCGACTCTAATCTTTTaGAATCAGACTGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPTLIF*NQTGEH
Trigger: ATGCTCTCCAGTCTGATTCCAAAAGATTAGAGTCGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTACATCAATCACATGCTaGCGTAAAAGGTTCTCACAT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLTSITC*RKRFSH
Trigger: ATGTGAGAACCTTTTACGCCAGCATGTGATTGATGT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCATCGTCTTTGTAAATaGTTATCTCAATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTHRLCK*LSQSVC
Trigger: ACAGACAGATTGAGATAACCATTTACAAAGACGATG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACATCGTCTTTGTAAATaGTTATCTCAATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVHRLCK*LSQSVC
Trigger: ACAGACAGATTGAGATAACCATTTACAAAGACGATG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAACTGCTTCTTTGTTTaGTGGGGGAACAGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSNCFFV*WGNSKA
Trigger: TGCTTTACTGTTCCCCCACCAAACAAAGAAGCAGTT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTACTGTTGCAAGCCATTaGAACATTTTTCCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSTVASH*NIFPSS
Trigger: GCTCGAAGGAAAAATGTTCCAATGGCTTGCAACAGT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAATCACAAAGGCTTCCTaGTTACTAATTAGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLITKAS*LLIRRF
Trigger: AAACCGCCTAATTAGTAACCAGGAAGCCTTTGTGAT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGTAATTCCTCTTGCTTaGACTGGTACTTCTGTAACT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLVIPLA*TGTSVT
Trigger: AGTTACAGAAGTACCAGTCCAAGCAAGAGGAATTAC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTTTGTCTGGATCGTTaGCGATTTCCAGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSFCLDR*RFPAQN
Trigger: ATTCTGAGCTGGAAATCGCCAACGATCCAGACAAAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCTGAGCACACAGACTaGATTTCTGAAATGTCAAAG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSEHTD*ISEMSK
Trigger: CTTTGACATTTCAGAAATCCAGTCTGTGTGCTCAGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCTGAGCACACAGACTaGATTTCTGAAATGTCAAAG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSEHTD*ISEMSK
Trigger: CTTTGACATTTCAGAAATCCAGTCTGTGTGCTCAGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTTCACACTTATTTGTaGTCGTTCCCAAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLHTYL*SFPSHL
Trigger: AAGATGACTTGGGAACGATCACAAATAAGTGTGAAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGTCTTCCTCAACATTTaGCAGCCAGTTCAAAAGATT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSVFLNI*QPVQKI
Trigger: AATCTTTTGAACTGGCTGTCAAATGTTGAGGAAGAC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTTGCCAAGAAATCCTaGGTATTTGTGTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSFAKKS*VFVSVP
Trigger: AGGAACAGACACAAATACTCAGGATTTCTTGGCAAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTGTTGATAAGCTTCTaGCTTAAATTGCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLLISF*LKLLQL
Trigger: GAGCTGAAGCAATTTAAGTCAGAAGCTTATCAACAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTTCCAGTCTCTTCATaGACTCTTTATGTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLPVSS*TLYVAQ
Trigger: TTGAGCAACATAAAGAGTTCATGAAGAGACTGGAAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp AGTGTTTATAGCAATGCTTGTTATAAACTCACTGTCACTTCATTGTTAACGGCAAGCCAGATTTCTGGCTaGAATCATCCTCGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SVYSNACYKLTVTSLLTASQISG*NHPRQK
Trigger: TTTCTGACGAGGATGATTTCAGCCAGAAATCTGGCT...TGCCGTTAACAATGAAGTGACAGTGAGTTTATAACAAGCATTGCTATAAACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTTGATAATACTTCCTaGACACACTCACTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLDNTS*THSLPF
Trigger: AAAAGGAAGTGAGTGTGTGCAGGAAGTATTATCAAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp ATGGATGACATCATTAATGTGTTGAATCTATTCAGTGAAAGGACTATGAAGGAGTCTGCCTTTTCTTTGTaGCAGTCAAAGTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: MDDIINVLNLFSERTMKESAFSL*QSKSRS
Trigger: GGACCTTGACTTTGACTGGCACAAAGAAAAGGCAGA...CTCCTTCATAGTCCTTTCACTGAATAGATTCAACACATTAATGATGTCATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCAAATTTAATATACTaGGTCATAAGAGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLANLIY*VIRVTR
Trigger: CCTGGTCACTCTTATGACGCAGTATATTAAATTTGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCAAATTTAATATACTaGGTCATAAGAGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLANLIY*VIRVTR
Trigger: CCTGGTCACTCTTATGACGCAGTATATTAAATTTGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCTTTGCAAGTGTCTTaGCTTTCTAGGACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSLQVS*LSRTLE
Trigger: TTCCAAAGTCCTAGAAAGGCAAGACACTTGCAAAGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTATTCATGTCCCACTTTaGGTTTTCAAGAGACTCTTT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLIHVPL*VFKRLF
Trigger: AAAGAGTCTCTTGAAAACGCAAAGTGGGACATGAAT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTGTCTGCTCAGTTCTaGTTTCAAGTACTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLSAQF*FQVLLF
Trigger: AAAGAGGAGTACTTGAAAGCAGAACTGAGCAGACAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGTGGTCATGATTTTATaGCCAGACGTAACAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSVVMIL*PDVTSS
Trigger: TGAACTTGTTACGTCTGGGCATAAAATCATGACCAC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTTTTCTTCATTGACTaGTTCTCCTCTTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFFFID*FSSSLD
Trigger: ATCCAGTGAAGAGGAGAAGCAGTCAATGAAGAAAAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTTCTTGGATATAAATaGCTTCCTTTGGGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFLGYK*LPLGSV
Trigger: AACTGAGCCCAAAGGAAGGCATTTATATCCAAGAAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTATGAACTCTTTATGTTaGTCAATGAGAGTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSMNSLC*SMRVRR
Trigger: TCTCCGGACTCTCATTGAGCAACATAAAGAGTTCAT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTTCTCCATCTCCTTTaGTGGGATTTCTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFLHLL*WDFFLF
Trigger: AAAGAGAAAGAAATCCCACCAAAGGAGATGGAGAAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGTTGCTCAATTCTGTTaGCAAAGTCAACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSVAQFC*QSQLLL
Trigger: AAGAAGCAGTTGACTTTGCCAACAGAATTGAGCAAC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGAACTGCTCCTTCTTaGTTGATATTTCTTTACTGG +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLRTAPS*LIFLYW
Trigger: CCAGTAAAGAAATATCAACCAAGAAGGAGCAGTTCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAGAACTGCTCCTTCTTaGTTGATATTTCTTTACTGG +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLRTAPS*LIFLYW
Trigger: CCAGTAAAGAAATATCAACCAAGAAGGAGCAGTTCT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAAGAGAGCCACCTCTTaGCATTTTTACAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSKRATS*HFYNLP
Trigger: TGGAAGATTGTAAAAATGCCAAGAGGTGGCTCTCTT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGGATCACAGTCCATCTaGGTTAATACTTTAGCTAAC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSGSQSI*VNTLAN
Trigger: GTTAGCTAAAGTATTAACCCAGATGGACTGTGATCC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTTCCAGCTGCATTTTaGTATGTGAAAGGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSFPAAF*YVKGLL
Trigger: TAGCAGACCTTTCACATACCAAAATGCAGCTGGAAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTATCACAAAGGCTTCCTaGTTACTAATTAGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSITKAS*LLIRRF
Trigger: AAACCGCCTAATTAGTAACCAGGAAGCCTTTGTGAT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGTAATTCCTCTTGCTTaGACTGGTACTTCTGTAACT +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSVIPLA*TGTSVT
Trigger: AGTTACAGAAGTACCAGTCCAAGCAAGAGGAATTAC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCACCTTTTCGTTCATaGCATTTATGCTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSPFRS*HLCCFD
Trigger: GTCAAAGCAGCATAAATGCCATGAACGAAAAGGTGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCAGATGAAAACCATTTaGTCCAACTTATCCTGTACA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLQMKTI*SNLSCT
Trigger: TGTACAGGATAAGTTGGACCAAATGGTTTTCATCTG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp TTTATTTCCAAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGATCATGCTCTGCTaGTCACACTTTTGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: FISKVSTKVKVNSDEHFAMIMLC*SHFCLN
Trigger: GTTCAAGCAAAAGTGTGACCAGCAGAGCATGATCAT...AGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTTGGAAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR CAA 72 bp ACACAGATGACACCCCTCCTCCAATACACAATGCACTaGTTAGATTTTATTTCCAAAGTCTCAACCAAAGTA +
Preference number: 4 (lower is better)
Translates to: TQMTPLLQYTMH*LDFISKVSTKV
Trigger: TACTTTGGTTGAGACTTTGGAAATAAAATCTAACAAGTGCATTGTGTATTGGAGGAGGGGTGTCATCTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR TCA 90 bp AGTGTTTATAGCAATGCTTGTTATAAACTCACTGTCACTTCATTGTTAACGGCAGCTTCCGAACCTTCATaGGATGCTGATTTATCCATT +
Preference number: 4 (lower is better)
Translates to: SVYSNACYKLTVTSLLTAASEPS*DADLSI
Trigger: AATGGATAAATCAGCATCTCATGAAGGTTCGGAAGC...TGCCGTTAACAATGAAGTGACAGTGAGTTTATAACAAGCATTGCTATAAACACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGGGGGTTTCATATCTTaGAGCAAAACCAAATATTCA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSGGFIS*SKTKYS
Trigger: TGAATATTTGGTTTTGCTTCAAGATATGAAACCCCC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCAACTTATCTTGAATaGTTAAGACTTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPTYLE*LRLHHL
Trigger: CAGGTGATGAAGTCTTAATCATTCAAGATAAGTTGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGCTGCTGCTTTCTTTaGTCTGTCTTTTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSCCFL*SVFSKI
Trigger: TATTTTGGAAAAGACAGATCAAAGAAAGCAGCAGCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR TCA 90 bp ATTACAATCGCAGATGCCTTGACAGATGCTATTAGACAAAAGGAGAGAGCAAAAACCACGGCAATTTTATaGGTTTTCTCTATGTTGAGA +
Preference number: 4 (lower is better)
Translates to: ITIADALTDAIRQKERAKTTAIL*VFSMLR
Trigger: TCTCAACATAGAGAAAACTCATAAAATTGCCGTGGT...TTTTGCTCTCTCCTTTTGTCTAATAGCATCTGTCAAGGCATCTGCGATTGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTAAATTTGCAAGGTTaGTTTGAACAGCAACAGTAT +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLNLQG*FEQQQY
Trigger: ATACTGTTGCTGTTCAAAGCAACCTTGCAAATTTAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAATGTTATTCTTGTCTaGTATAACTGCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLNVILV*YNCFLF
Trigger: GAAGAGGAAGCAGTTATAGCAGACAAGAATAACATT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGAACTTTGTCTAAACTaGTTTTCAAGATACTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLELCLN*FSRYFS
Trigger: GGAGAAGTATCTTGAAAAGCAGTTTAGACAAAGTTC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGAACTTTGTCTAAACTaGTTTTCAAGATACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLELCLN*FSRYFS
Trigger: GGAGAAGTATCTTGAAAAGCAGTTTAGACAAAGTTC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR GCA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTTGTGAATTTCTGGTaGTTTCAGATTCCACTTTTC +
Preference number: 4 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFVNFW*FQIPLF
Trigger: GAAAAGTGGAATCTGAAAGCACCAGAAATTCACAAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR GCA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTATGGTTTACCATAATTaGGTGTTAAAGGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLMVYHN*VLKDGE
Trigger: TTCTCCATCCTTTAACACGCAATTATGGTAAACCAT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CCA 90 bp ATGGATGACATCATTAATGTGTTGAATCTATTCAGTGAAAGGACTATGAAGGAGTGTACTTGCGCTGGATaGCATCTTTCAGATTCCTTA +
Preference number: 4 (lower is better)
Translates to: MDDIINVLNLFSERTMKECTCAG*HLSDSL
Trigger: TAAGGAATCTGAAAGATGCCATCCAGCGCAAGTACA...CTCCTTCATAGTCCTTTCACTGAATAGATTCAACACATTAATGATGTCATCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CCA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCAGATGAAAACCATTTaGTCCAACTTATCCTGTACA +
Preference number: 4 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSQMKTI*SNLSCT
Trigger: TGTACAGGATAAGTTGGACCAAATGGTTTTCATCTG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
3UTR CAA 72 bp CAAATAAGCAAACCCAACTTTATTCATGAGAGAGATTaGGGAATCGCTGCCTTTACATTAGCATTACAATCG +
Preference number: 4 (lower is better)
Translates to: QISKPNFIHERD*GIAAFTLALQS
Trigger: CGATTGTAATGCTAATGTAAAGGCAGCGATTCCCAAATCTCTCTCATGAATAAAGTTGGGTTTGCTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR GCA 90 bp TTTATTTCCAAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTGCAAATTTAATATACTaGGTCATAAGAGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: FISKVSTKVKVNSDEHFAANLIY*VIRVTR
Trigger: CCTGGTCACTCTTATGACGCAGTATATTAAATTTGC...AGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTTGGAAATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
3UTR CAA 72 bp TATAGCAATGCTTGTTATAAACTCACTGTCACTTCATaGTTAACGGCAAGACTTCGTAATTTTCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: YSNACYKLTVTS*LTARLRNFHRK
Trigger: TTTCCTGTGAAAATTACGAAGTCTTGCCGTTAACAATGAAGTGACAGTGAGTTTATAACAAGCATTGCTATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS TCA 90 bp GGAGGTTCTCCTCCACCGCGGCTCGCCGAGCTTCCGCCTCCGCCGTaGGCTGCCTCACCCGCTCCAGCTCCCGCTCGGCAGCTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: GGSPPPRLAELPPPP*AASPAPAPARQLPS
Trigger: AGAAGGAAGCTGCCGAGCGGGAGCTGGAGCGGGTGAGGCAGCTCACGGCGGAGGCGGAAGCTCGGCGAGCCGCGGTGGAGGAGAACCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp TTCTCCTCCACCGCGGCTCGCCGAGCTTCCGCCTCCGCCGTGAGCTaGCTCACCCGCTCCAGCTCCCGCTCGGCAGCTTCCTTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: FSSTAARRASASAVS*LTRSSSRSAASFSL
Trigger: GAGGGAGAAGGAAGCTGCCGAGCGGGAGCTGGAGCGGGTGAGGCAGCTCACGGCGGAGGCGGAAGCTCGGCGAGCCGCGGTGGAGGAGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp GGTACCCGGGTAGTCGCAGCTTGCTTCCCTGGATTGGTGTGCCCTTaGGTGTGCTGGCGGCAGCAGGCACCGGTGGGGAGGCTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: GTRVVAACFPGLVCP*VCWRQQAPVGRLPG
Trigger: GCCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS GCA 90 bp TGTGCCCTTGGGTGTGCTGGCGGCAGCAGGCACCGGTGGGGAGGCTaGCTGGCAGGCATGACTCGACGCGGAAGTGGATCTGTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: CALGCAGGSRHRWGG*LAGMTRRGSGSVGG
Trigger: TCCCCCAACAGATCCACTTCCGCGTCGAGTCATGCCTGCCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGGGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS TCA 90 bp GTGCTGGCGGCAGCAGGCACCGGTGGGGAGGCTGCCTGGCAGGCATaGCTCGACGCGGAAGTGGATCTGTTGGGGGAAGCTCCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: VLAAAGTGGEAAWQA*LDAEVDLLGEAPLD
Trigger: ATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCGCGTCGAGTCATGCCTGCCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS GCA 90 bp AAATGTCAAAGTCGGACGCGTCGCTGCCTCGGCGGCTGCTGGCTCTaGTTCCGGCTTTGCTTCCGGCTCTGCTCCCTGGGCGGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: KCQSRTRRCLGGCWL*FRLCFRLCSLGGWE
Trigger: CTCCCAGCCGCCCAGGGAGCAGAGCCGGAAGCAAAGCCGGAAGCAGAGCCAGCAGCCGCCGAGGCAGCGACGCGTCCGACTTTGACATTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp GGGAGGCTGCCTGGCAGGCATGACTCGACGCGGAAGTGGATCTGTTaGGGGAAGCTCCTCTGGATGAAGGGCGAGATCGGCGGCCTCGCG +
Preference number: 5 (lower is better)
Translates to: GRLPGRHDSTRKWIC*GKLLWMKGEIGGLA
Trigger: CGCGAGGCCGCCGATCTCGCCCTTCATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCGCGTCGAGTCATGCCTGCCAGGCAGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CCA 90 bp CTGGATTGGTGTGCCCTTGGGTGTGCTGGCGGCAGCAGGCACCGGTaGGGAGGCTGCCTGGCAGGCATGACTCGACGCGGAAGTGGATCT +
Preference number: 5 (lower is better)
Translates to: LDWCALGCAGGSRHR*GGCLAGMTRRGSGS
Trigger: AGATCCACTTCCGCGTCGAGTCATGCCTGCCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS CCA 90 bp GTAGTCGCAGCTTGCTTCCCTGGATTGGTGTGCCCTTGGGTGTGCTaGCGGCAGCAGGCACCGGTGGGGAGGCTGCCTGGCAGGCATGAC +
Preference number: 5 (lower is better)
Translates to: VVAACFPGLVCPWVC*RQQAPVGRLPGRHD
Trigger: GTCATGCCTGCCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS GCA 90 bp AGCTCCTGCTTGGCGATGAGCCCAGCCAGCGCCCCTGCTAACCTCTaGTGGTGCTGCTTCGCCCAGGCCAGCACCTCTTCAAACCTGGCC +
Preference number: 5 (lower is better)
Translates to: SSCLAMSPASAPANL*WCCFAQASTSSNLA
Trigger: GGCCAGGTTTGAAGAGGTGCTGGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGCAGGGGCGCTGGCTGGGCTCATCGCCAAGCAGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp GAGAATCTTGGGTGTGCTGGCGGCAGCAGGCACCGGTGGGGAGGCTaGCTGGCAGGCATGACTCGACGCGGAAGTGGATCTGTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: ENLGCAGGSRHRWGG*LAGMTRRGSGSVGG
Trigger: TCCCCCAACAGATCCACTTCCGCGTCGAGTCATGCCTGCCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGATTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS GCA 90 bp GGCTGCCCTCTTCCCCAGCTGCACAGCATCTTCCTTAGTGGGGCTTaGGGCAGGGTCCTCCCACGGCAGTTCTCCGGAGGACACAGCTGG +
Preference number: 5 (lower is better)
Translates to: GCPLPQLHSIFLSGA*GRVLPRQFSGGHSW
Trigger: CCAGCTGTGTCCTCCGGAGAACTGCCGTGGGAGGACCCTGCCGCAAGCCCCACTAAGGAAGATGCTGTGCAGCTGGGGAAGAGGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS CCA 90 bp AGGCATGACTCGACGCGGAAGTGGATCTGTTGGGGGAAGCTCCTCTaGATGAAGGGCGAGATCGGCGGCCTCGCGGTCGGAAGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: RHDSTRKWICWGKLL*MKGEIGGLAVGRRP
Trigger: TGGCCGCCTTCCGACCGCGAGGCCGCCGATCTCGCCCTTCATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCGCGTCGAGTCATGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS TCA 90 bp ATGACTCGACGCGGAAGTGGATCTGTTGGGGGAAGCTCCTCTGGATaGAGGGCGAGATCGGCGGCCTCGCGGTCGGAAGGCGGCCATACC +
Preference number: 5 (lower is better)
Translates to: MTRRGSGSVGGSSSG*RARSAASRSEGGHT
Trigger: GGTATGGCCGCCTTCCGACCGCGAGGCCGCCGATCTCGCCCTTCATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCGCGTCGAGTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS GCA 90 bp AGGTCAGCTCATCCACCTGCTGCTTCAGCTCCTCCTCTTTCTGTCTaGCCTGCTCCCTCTGGGGCCGTGCCTGTGCCACCGCAGCGCTCT +
Preference number: 5 (lower is better)
Translates to: RSAHPPAASAPPLSV*PAPSGAVPVPPQRS
Trigger: AGAGCGCTGCGGTGGCACAGGCACGGCCCCAGAGGGAGCAGGGCAGACAGAAAGAGGAGGAGCTGAAGCAGCAGGTGGATGAGCTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp TTCCACCACAGGCTTCACTTCTTCAAGCCGGGCAGCTGCGGCCGCTaGAACTCGCCTCCTGATGTGTCGGGGGCTTGCTCGGAACCCCTC +
Preference number: 5 (lower is better)
Translates to: FHHRLHFFKPGSCGR*NSPPDVSGACSEPL
Trigger: GAGGGGTTCCGAGCAAGCCCCCGACACATCAGGAGGCGAGTTGCAGCGGCCGCAGCTGCCCGGCTTGAAGAAGTGAAGCCTGTGGTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CCA 90 bp TGGCTCTGCTTCCGGCTTTGCTTCCGGCTCTGCTCCCTGGGCGGCTaGGAGTCTTCCTGGACTCAGCGAACTGTGTTCGGACTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: WLCFRLCFRLCSLGG*ESSWTQRTVFGLWR
Trigger: CCGCCAGAGTCCGAACACAGTTCGCTGAGTCCAGGAAGACTCCCAGCCGCCCAGGGAGCAGAGCCGGAAGCAAAGCCGGAAGCAGAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTCATCTGCTACTCCTaGTCCTCCTCGCCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLICYS*SSSPVS
Trigger: GGAGACGGGCGAGGAGGACAAGGAGTAGCAGATGAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTCTGCCTCGTCAGCTaGTCCATGAGCCCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVFCLVS*SMSPLR
Trigger: CCTCAGCGGGCTCATGGACAAGCTGACGAGGCAGAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGCTTGCTTCCCTGGATaGGTGTGCCCTTGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVACFPG*VCPWVC
Trigger: GCACACCCAAGGGCACACCAATCCAGGGAAGCAAGC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
CDS GCA 90 bp GGATTTCTGAAATGTCAAAGTCGGACGCGTCGCTGCCTCGGCGGCTaGTGGCTCTGCTTCCGGCTTTGCTTCCGGCTCTGCTCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GFLKCQSRTRRCLGG*WLCFRLCFRLCSLG
Trigger: GCCCAGGGAGCAGAGCCGGAAGCAAAGCCGGAAGCAGAGCCAGCAGCCGCCGAGGCAGCGACGCGTCCGACTTTGACATTTCAGAAATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp GCAGCTTCCTTCTCCCTCACGATCGTCTCCAGCTCACGGCGGTACTaGTTGGCCTCGCTCTCGGCCCTCAGCTTCTGCAGGGCGATGTCT +
Preference number: 5 (lower is better)
Translates to: AASFSLTIVSSSRRY*LASLSALSFCRAMS
Trigger: AGACATCGCCCTGCAGAAGCTGAGGGCCGAGAGCGAGGCCAAGCAGTACCGCCGTGAGCTGGAGACGATCGTGAGGGAGAAGGAAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp TGCTTCTCGGCCACCTGCTTCTGGAAGGCCAGGTCCCGCTCCATCTaGTTCACCAGTCGCAGGAGCTCCTCCTCGTGGTCCCGCTTTCGT +
Preference number: 5 (lower is better)
Translates to: CFSATCFWKARSRSI*FTSRRSSSSWSRFR
Trigger: ACGAAAGCGGGACCACGAGGAGGAGCTCCTGCGACTGGTGAAGCAGATGGAGCGGGACCTGGCCTTCCAGAAGCAGGTGGCCGAGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp AGCTCATCCACCTGCTGCTTCAGCTCCTCCTCTTTCTGTCTGCCCTaGTCCCTCTGGGGCCGTGCCTGTGCCACCGCAGCGCTCTCTCTA +
Preference number: 5 (lower is better)
Translates to: SSSTCCFSSSSFCLP*SLWGRACATAALSL
Trigger: TAGAGAGAGCGCTGCGGTGGCACAGGCACGGCCCCAGAGGGAGCAGGGCAGACAGAAAGAGGAGGAGCTGAAGCAGCAGGTGGATGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp GGCAGCTGCGGCCGCTGCAACTCGCCTCCTGATGTGTCGGGGGCTTaGTCGGAACCCCTCAGAGCGAAAGTGATGAGATCTCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GSCGRCNSPPDVSGA*SEPLRAKVMRSQSS
Trigger: GCTGCTCTGAGATCTCATCACTTTCGCTCTGAGGGGTTCCGAGCAAGCCCCCGACACATCAGGAGGCGAGTTGCAGCGGCCGCAGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CCA 90 bp AAGCCTTTCCCTGACAGGTACCCGGGTAGTCGCAGCTTGCTTCCCTaGATTGGTGTGCCCTTGGGTGTGCTGGCGGCAGCAGGCACCGGT +
Preference number: 5 (lower is better)
Translates to: KPFPDRYPGSRSLLP*IGVPLGVLAAAGTG
Trigger: ACCGGTGCCTGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGGGAAAGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS CCA 90 bp GGCGGCTGGGAGTCTTCCTGGACTCAGCGAACTGTGTTCGGACTCTaGCGGCTGCCGTCGTTATCAAGGCGCTGTCCTCCCCAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: GGWESSWTQRTVFGL*RLPSLSRRCPPQSG
Trigger: TCCACTCTGGGGAGGACAGCGCCTTGATAACGACGGCAGCCGCCAGAGTCCGAACACAGTTCGCTGAGTCCAGGAAGACTCCCAGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGGCTTCTCCTACAGCTaGTGGGTTCAGGGGACAGTG +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVGFSYS*WVQGTV
Trigger: CACTGTCCCCTGAACCCACAAGCTGTAGGAGAAGCC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTCTGCCTCGTCAGCTaGTCCATGAGCCCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFCLVS*SMSPLR
Trigger: CCTCAGCGGGCTCATGGACAAGCTGACGAGGCAGAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTGGCCAGCATCATCTaGCAGGTTCTGTTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVASII*QVLLAL
Trigger: CAGCGCCAACAGAACCTGCAAGATGATGCTGGCCAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGCGGACGGAGGCTTTaGATTGGCCACAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSGRRL*IGHKLL
Trigger: GAGGAGCTTGTGGCCAATCAAAAGCCTCCGTCCGCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGCCTGGGTAAGCCAGTaGATGAAGTCCTGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVAWVSQ*MKSWRE
Trigger: CTCCCTCCAGGACTTCATCAACTGGCTTACCCAGGC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTGTCCAGGGCGTCGTaGAGCTTCCTCCTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLSRAS*SFLLLS
Trigger: GGAAAGGAGGAGGAAGCTCAACGACGCCCTGGACAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGCGGAAGTGGATCTGTaGGGGGAAGCTCCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVAEVDL*GEAPLD
Trigger: ATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCGC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTGGATTGGTGTGCCCTaGGGTGTGCTGGCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNWIGVP*GVLAAA
Trigger: TGCTGCCGCCAGCACACCCAAGGGCACACCAATCCA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
CDS TCA 90 bp GGCTGGCTGCTCTCCCTGTCCAGCGGAGCCCCTGGCTGTCGGAACTaGACCTCCTTCGGAAGTTGTTCAGCAGCCCTGTGCGGCCATTTT +
Preference number: 5 (lower is better)
Translates to: GWLLSLSSGAPGCRN*TSFGSCSAALCGHF
Trigger: AAAATGGCCGCACAGGGCTGCTGAACAACTTCCGAAGGAGGTTCAGTTCCGACAGCCAGGGGCTCCGCTGGACAGGGAGAGCAGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp TCACTTCTTCAAGCCGGGCAGCTGCGGCCGCTGCAACTCGCCTCCTaGTGTGTCGGGGGCTTGCTCGGAACCCCTCAGAGCGAAAGTGAT +
Preference number: 5 (lower is better)
Translates to: SLLQAGQLRPLQLAS*CVGGLLGTPQSESD
Trigger: ATCACTTTCGCTCTGAGGGGTTCCGAGCAAGCCCCCGACACATCAGGAGGCGAGTTGCAGCGGCCGCAGCTGCCCGGCTTGAAGAAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS TCA 90 bp CACGGCAGTTCTCCGGAGGACACAGCTGGCTGTCCCCCAGCAGGCTaGCTGACGCCCTTCTTGCCTTCTCTTTCACTGCTTTGCCGCACC +
Preference number: 5 (lower is better)
Translates to: HGSSPEDTAGCPPAG*LTPFLPSLSLLCRT
Trigger: GGTGCGGCAAAGCAGTGAAAGAGAAGGCAAGAAGGGCGTCAGTCAGCCTGCTGGGGGACAGCCAGCTGTGTCCTCCGGAGAACTGCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS GCA 90 bp TGCCGACAGGTCCTCACAGACCTCCTGGGCCTCCTTGATCTTCGGTaGCTGCTGCTCGATTTCCTGCTTCAGCCTCTGGGCTGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: CRQVLTDLLGLLDLR*LLLDFLLQPLGCLQ
Trigger: CTGGAGGCAGCCCAGAGGCTGAAGCAGGAAATCGAGCAGCAGGCACCGAAGATCAAGGAGGCCCAGGAGGTCTGTGAGGACCTGTCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp GCTCTGCTCAGGAGCGCTTCCCATCTACTGTCCAAGAGGCTCAGCTaGCTCGTGAGCTTCACTCTGTCCGCAGGCTCTGCCGAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: ALLRSASHLLSKRLS*LVSFTLSAGSAEAA
Trigger: CGCTGCTTCGGCAGAGCCTGCGGACAGAGTGAAGCTCACGAGGCAGCTGAGCCTCTTGGACAGTAGATGGGAAGCGCTCCTGAGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp CAGAGTGGAAGCCTTTCCCTGACAGGTACCCGGGTAGTCGCAGCTTaGTTCCCTGGATTGGTGTGCCCTTGGGTGTGCTGGCGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QSGSLSLTGTRVVAA*FPGLVCPWVCWRQQ
Trigger: CTGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGGGAAAGGCTTCCACTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS GCA 90 bp ATGATGGACTTCCACCACAGGCTTCACTTCTTCAAGCCGGGCAGCTaGGGCCGCTGCAACTCGCCTCCTGATGTGTCGGGGGCTTGCTCG +
Preference number: 5 (lower is better)
Translates to: MMDFHHRLHFFKPGS*GRCNSPPDVSGACS
Trigger: CGAGCAAGCCCCCGACACATCAGGAGGCGAGTTGCAGCGGCCGCAGCTGCCCGGCTTGAAGAAGTGAAGCCTGTGGTGGAAGTCCATCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS GCA 90 bp AGAGGTTTCTGGTCACCGTGCTCTGTGGCTGCCCTCTTCCCCAGCTaGACAGCATCTTCCTTAGTGGGGCTTGCGGCAGGGTCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: RGFWSPCSVAALFPS*TASSLVGLAAGSSH
Trigger: GTGGGAGGACCCTGCCGCAAGCCCCACTAAGGAAGATGCTGTGCAGCTGGGGAAGAGGGCAGCCACAGAGCACGGTGACCAGAAACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS CCA 90 bp TGCTGCTCGATTTCCTGCTTCAGCCTCTGGGCTGCCTCCAGTTGTTaGTTCACGGCATCTGGCAGTGCGCCTGAGGTGAGGCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CCSISCFSLWAASSC*FTASGSAPEVRPLL
Trigger: CAGCAGCGGCCTCACCTCAGGCGCACTGCCAGATGCCGTGAACCAACAACTGGAGGCAGCCCAGAGGCTGAAGCAGGAAATCGAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp CTTCCTTCTCCCTCACGATCGTCTCCAGCTCACGGCGGTACTGCTTaGCCTCGCTCTCGGCCCTCAGCTTCTGCAGGGCGATGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: LPSPSRSSPAHGGTA*PRSRPSASAGRCLP
Trigger: TGGAAGACATCGCCCTGCAGAAGCTGAGGGCCGAGAGCGAGGCCAAGCAGTACCGCCGTGAGCTGGAGACGATCGTGAGGGAGAAGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp AGGTCCCGCTCCATCTGCTTCACCAGTCGCAGGAGCTCCTCCTCGTaGTCCCGCTTTCGTTGCAGTTCTTCCACCAGGGCCCGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: RSRSICFTSRRSSSS*SRFRCSSSTRARFC
Trigger: GCAGAAACGGGCCCTGGTGGAAGAACTGCAACGAAAGCGGGACCACGAGGAGGAGCTCCTGCGACTGGTGAAGCAGATGGAGCGGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp CTCCGAGTAGCATGGCTGGCTGCTCTCCCTGTCCAGCGGAGCCCCTaGCTGTCGGAACTGAACCTCCTTCGGAAGTTGTTCAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: LRVAWLAALPVQRSP*LSELNLLRKLFSSP
Trigger: AGGGCTGCTGAACAACTTCCGAAGGAGGTTCAGTTCCGACAGCCAGGGGCTCCGCTGGACAGGGAGAGCAGCCAGCCATGCTACTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp GGGTGGCTGATCCCCGTGATCACTAATTCACACTGGCGTAGCTGCTaGGCGAAGCCCTCGTCCACCAGCCCTCTATGCAAAGCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: GWLIPVITNSHWRSC*AKPSSTSPLCKASA
Trigger: GGCCGAGGCTTTGCATAGAGGGCTGGTGGACGAGGGCTTCGCCCAGCAGCTACGCCAGTGTGAATTAGTGATCACGGGGATCAGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTTTCAGTCTCCTCCTaGAGGGCCGTAGTCACTGCC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVFSVSS*RAVVTA
Trigger: GGCAGTGACTACGGCCCTCAAGGAGGAGACTGAAAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTCTGCCTCGTCAGCTaGTCCATGAGCCCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFCLVS*SMSPLR
Trigger: CCTCAGCGGGCTCATGGACAAGCTGACGAGGCAGAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAAATGTTTGCTGGCTTaGGCCTCGCAGGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCKCLLA*ASQAWS
Trigger: GCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGCGGACGGAGGCTTTaGATTGGCCACAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSGRRL*IGHKLL
Trigger: GAGGAGCTTGTGGCCAATCAAAAGCCTCCGTCCGCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCAGTTACACAGCTCCTaGTGCATGGACTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVQLHSS*CMDCSW
Trigger: CCAGCTGCAGTCCATGCACAAGGAGCTGTGTAACTG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTGCCGGTGCTCCTCTaGCTGTCTCCTCAGAGTCTC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLPVLL*LSPQSL
Trigger: GAGACTCTGAGGAGACAGCAAGAGGAGCACCGGCAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTACTGAACGGCAGCTaGCATGGCCTCTTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVLNGS*HGLFQS
Trigger: AGACTGGAAGAGGCCATGCAAGCTGCCGTTCAGTAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCGTTAAGCTGCTCCTaGGCTGTCTCTGGGAGACCT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCALSCS*AVSGRP
Trigger: AGGTCTCCCAGAGACAGCCAAGGAGCAGCTTAACGC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGCCACGTTCAGAGTTaGCTCAGCCTGGGTAAGCCA +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSHVQS*LSLGKP
Trigger: TGGCTTACCCAGGCTGAGCAAACTCTGAACGTGGCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCAGACCTGCTGCCACTaGCTCACCAGCAGGTTAACC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCQTCCH*LTSRLT
Trigger: GGTTAACCTGCTGGTGAGCAAGTGGCAGCAGGTCTG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTGTCCAGGGCGTCGTaGAGCTTCCTCCTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLSRAS*SFLLLS
Trigger: GGAAAGGAGGAGGAAGCTCAACGACGCCCTGGACAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS TCA 90 bp GTGTGTGTCAGCCATGCGAGGAGCTCGTCCAGGGCGTGCTGGAACTaGCCCAGTGCTAAGAGAGCACCCTCGAGCTTGTGCTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VCVSHARSSSRACWN*PSAKRAPSSLCCLL
Trigger: CAGCAGACAGCACAAGCTCGAGGGTGCTCTCTTAGCACTGGGTCAGTTCCAGCACGCCCTGGACGAGCTCCTCGCATGGCTGACACACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp ATCTGCTCCTTGATCTTCTCCACCTCGGCGGAGATGGATGGCGGCTaGCGCAGACGCTCCGCAATGCGTTCCAGGCTCTCAAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: ICSLIFSTSAEMDGG*RRRSAMRSRLSRIW
Trigger: CCAGATCCTTGAGAGCCTGGAACGCATTGCGGAGCGTCTGCGGCAGCCGCCATCCATCTCCGCCGAGGTGGAGAAGATCAAGGAGCAGAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp AGGCCGTCAATCTCCTCTCTGATTGCCTCTGCAGCTTCCTGCTGCTaGTTTACGACCGAGGGGTCGATTCCGGGATCCTCCAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: RPSISSLIASAASCC*FTTEGSIPGSSRSR
Trigger: CCGGGACCTGGAGGATCCCGGAATCGACCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGCAGAGGCAATCAGAGAGGAGATTGACGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp TCTCGGCTGCCTTCGATGAGTTCCCTGGCAGAGCGCTTCAGGGCCTaGACGCTGCTGGTCCTCTTCCCCAGCTCTTTCTGGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: SRLPSMSSLAERFRA*TLLVLFPSSFWKTL
Trigger: CAAGGTCTTCCAGAAAGAGCTGGGGAAGAGGACCAGCAGCGTGCAGGCCCTGAAGCGCTCTGCCAGGGAACTCATCGAAGGCAGCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp GATATGGAGAGTGCACACACGGTCTCCCAGCGGGTGCTTAGCTCCTaGATCTGGACCCTGACCCAGGAGGAGTCATCTCGGCTGCCTTCG +
Preference number: 5 (lower is better)
Translates to: DMESAHTVSQRVLSS*IWTLTQEESSRLPS
Trigger: CGAAGGCAGCCGAGATGACTCCTCCTGGGTCAGGGTCCAGATGCAGGAGCTAAGCACCCGCTGGGAGACCGTGTGTGCACTCTCCATATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp CACTGGCGTAGCTGCTGGGCGAAGCCCTCGTCCACCAGCCCTCTATaGAAAGCCTCGGCCACCCTGTACTTTTTCCCAGTTAGGGGATCG +
Preference number: 5 (lower is better)
Translates to: HWRSCWAKPSSTSPL*KASATLYFFPVRGS
Trigger: CGATCCCCTAACTGGGAAAAAGTACAGGGTGGCCGAGGCTTTGCATAGAGGGCTGGTGGACGAGGGCTTCGCCCAGCAGCTACGCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp ACGGGGTGGCTGATCCCCGTGATCACTAATTCACACTGGCGTAGCTaGTGGGCGAAGCCCTCGTCCACCAGCCCTCTATGCAAAGCCTCG +
Preference number: 5 (lower is better)
Translates to: TGWLIPVITNSHWRS*WAKPSSTSPLCKAS
Trigger: CGAGGCTTTGCATAGAGGGCTGGTGGACGAGGGCTTCGCCCAGCAGCTACGCCAGTGTGAATTAGTGATCACGGGGATCAGCCACCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp GCAGGGGGCCCGCGGACAGCAGTATCTCAAGCACTCGGATGGCCATaGATTCTGAGACCATGCCCTGAGCCAGAGAATCAAGCACGGGGA +
Preference number: 5 (lower is better)
Translates to: AGGPRTAVSQALGWP*ILRPCPEPENQARG
Trigger: TCCCCGTGCTTGATTCTCTGGCTCAGGGCATGGTCTCAGAATCCATGGCCATCCGAGTGCTTGAGATACTGCTGTCCGCGGGCCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp ACCTGCTGCTTCAGCTCCTCCTCTTTCTGTCTGCCCTGCTCCCTCTaGGGCCGTGCCTGTGCCACCGCAGCGCTCTCTCTACATGAAAAC +
Preference number: 5 (lower is better)
Translates to: TCCFSSSSFCLPCSL*GRACATAALSLHEN
Trigger: GTTTTCATGTAGAGAGAGCGCTGCGGTGGCACAGGCACGGCCCCAGAGGGAGCAGGGCAGACAGAAAGAGGAGGAGCTGAAGCAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTGTCACAGCTGTACTaGCGCTGGATGGCATCTTTC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLSQLY*RWMASF
Trigger: GAAAGATGCCATCCAGCGCAAGTACAGCTGTGACAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTTTCAGTCTCCTCCTaGAGGGCCGTAGTCACTGCC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFSVSS*RAVVTA
Trigger: GGCAGTGACTACGGCCCTCAAGGAGGAGACTGAAAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGGCTCCCGTAAATGTTaGCTGGCTTTGGCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERGSRKC*LALASQ
Trigger: CTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTCTGGATGTCATTCTaGGCAGGAAGCAGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFWMSF*AGSSEP
Trigger: GGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCCAAGACATCCAGCTTaGCGGAAATCGGGGGAGAGT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCPRHPA*RKSGES
Trigger: ACTCTCCCCCGATTTCCGCAAAGCTGGATGTCTTGG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTGCATGCACGCCTTTaGCTTTCTCAGGGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLHARL*LSQGFC
Trigger: GCAGAAACCCTGAGAAAGCAAAAGGCGTGCATGCAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGTGGCCAGCATCATCTaGCAGGTTCTGTTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNVASII*QVLLAL
Trigger: CAGCGCCAACAGAACCTGCAAGATGATGCTGGCCAC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTGCCGGTGCTCCTCTaGCTGTCTCCTCAGAGTCTC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLPVLL*LSPQSL
Trigger: GAGACTCTGAGGAGACAGCAAGAGGAGCACCGGCAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGAGCACCCTCGAGCTaGTGCTGTCTGCTGACAATT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRAPSS*CCLLTI
Trigger: AATTGTCAGCAGACAGCACAAGCTCGAGGGTGCTCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGTTAAGCTGCTCCTaGGCTGTCTCTGGGAGACCT +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNALSCS*AVSGRP
Trigger: AGGTCTCCCAGAGACAGCCAAGGAGCAGCTTAACGC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATGTCTTGGTCAATGTaGGTCTCCGCAGATCGGGGA +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVMSWSM*VSADRG
Trigger: TCCCCGATCTGCGGAGACCAACATTGACCAAGACAT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCCTGGGTAAGCCAGTaGATGAAGTCCTGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERAWVSQ*MKSWRE
Trigger: CTCCCTCCAGGACTTCATCAACTGGCTTACCCAGGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGGTTTGTACGCATCTTaGTTTGGATGCAGAGCGGCC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVGLYAS*FGCRAA
Trigger: GGCCGCTCTGCATCCAAACAAAGATGCGTACAAACC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTGGCACACTTACACTaGGCTACCTGCCTTGTGACC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLAHLH*ATCLVT
Trigger: GGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCGGAAGTGGATCTGTaGGGGGAAGCTCCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERAEVDL*GEAPLD
Trigger: ATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGGGATTTTAGAAGGCTaGGCTGTGGATGGCCGAGAA +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVGILEG*AVDGRE
Trigger: TTCTCGGCCATCCACAGCCAAGCCTTCTAAAATCCC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS GCA 90 bp AGGTCCTCACAGACCTCCTGGGCCTCCTTGATCTTCGGTGCCTGCTaGTCGATTTCCTGCTTCAGCCTCTGGGCTGCCTCCAGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: RSSQTSWASLIFGAC*SISCFSLWAASSCW
Trigger: CCAACAACTGGAGGCAGCCCAGAGGCTGAAGCAGGAAATCGAGCAGCAGGCACCGAAGATCAAGGAGGCCCAGGAGGTCTGTGAGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp GACAGGTCCTCACAGACCTCCTGGGCCTCCTTGATCTTCGGTGCCTaGTGCTCGATTTCCTGCTTCAGCCTCTGGGCTGCCTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: DRSSQTSWASLIFGA*CSISCFSLWAASSC
Trigger: ACAACTGGAGGCAGCCCAGAGGCTGAAGCAGGAAATCGAGCAGCAGGCACCGAAGATCAAGGAGGCCCAGGAGGTCTGTGAGGACCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp CCACCTCGGCGGAGATGGATGGCGGCTGCCGCAGACGCTCCGCAATaGGTTCCAGGCTCTCAAGGATCTGGTCGATCTTGTCATGAAACT +
Preference number: 5 (lower is better)
Translates to: PPRRRWMAAAADAPQ*VPGSQGSGRSCHET
Trigger: AGTTTCATGACAAGATCGACCAGATCCTTGAGAGCCTGGAACGCATTGCGGAGCGTCTGCGGCAGCCGCCATCCATCTCCGCCGAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp GCGTCGTTGAGCTTCCTCCTCCTTTCCAAGGCCAGGAGCCAGACCTaGTGCCACTTGCTCACCAGCAGGTTAACCCTGGGGTTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: ASLSFLLLSKARSQT*CHLLTSRLTLGFLV
Trigger: GACCAAGAACCCCAGGGTTAACCTGCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCTGGCCTTGGAAAGGAGGAGGAAGCTCAACGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp GGGAGTCTTCCTGGACTCAGCGAACTGTGTTCGGACTCTGGCGGCTaGCGTCGTTATCAAGGCGCTGTCCTCCCCAGAGTGGAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: GSLPGLSELCSDSGG*RRYQGAVLPRVEAF
Trigger: AAAGGCTTCCACTCTGGGGAGGACAGCGCCTTGATAACGACGGCAGCCGCCAGAGTCCGAACACAGTTCGCTGAGTCCAGGAAGACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp AGCTCACGGCGGTACTGCTTGGCCTCGCTCTCGGCCCTCAGCTTCTaGAGGGCGATGTCTTCCACGTTCCTCTGTTGCTTCCTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: SSRRYCLASLSALSF*RAMSSTFLCCFLSS
Trigger: TGAACTGAGGAAGCAACAGAGGAACGTGGAAGACATCGCCCTGCAGAAGCTGAGGGCCGAGAGCGAGGCCAAGCAGTACCGCCGTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp GGCCAACAGCTCCTCCTCGAGTCTCCGGCACTTCTGATAGTGGTTTaGTTCCACGGGCGGGCCTTGCTGCATCTTCTCACGGTAGCACTG +
Preference number: 5 (lower is better)
Translates to: GQQLLLESPALLIVV*FHGRALLHLLTVAL
Trigger: CAGTGCTACCGTGAGAAGATGCAGCAAGGCCCGCCCGTGGAAGCAAACCACTATCAGAAGTGCCGGAGACTCGAGGAGGAGCTGTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp GACGGTTCATGCAGGAACTGTAGGACGGCGTTGTTCAGCAAGCCCTaGTGCACAGCCATTTCTGGAGGGACACGGACGCCTCTCACAGGG +
Preference number: 5 (lower is better)
Translates to: DGSCRNCRTALFSKP*CTAISGGTRTPLTG
Trigger: CCCTGTGAGAGGCGTCCGTGTCCCTCCAGAAATGGCTGTGCAGCAGGGCTTGCTGAACAACGCCGTCCTACAGTTCCTGCATGAACCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp ACTGTCTTCGCTCGCCCCATCAGCCCTGCCACCACACTCCGGTACTaGAGGAGCTCCTCCTTTTCCTCCATGGACTCCTGGACAAGGTCT +
Preference number: 5 (lower is better)
Translates to: TVFARPISPATTLRY*RSSSFSSMDSWTRS
Trigger: AGACCTTGTCCAGGAGTCCATGGAGGAAAAGGAGGAGCTCCTGCAGTACCGGAGTGTGGTGGCAGGGCTGATGGGGCGAGCGAAGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000185897.7
CDS CCA 90 bp GCAATGGGCTCCCGTAAATGTTTGCTGGCTTTGGCCTCGCAGGCCTaGAGCCCGGAGAGAAGGCCGCAGGAAGCATCTTCATACTGCTGG +
Preference number: 5 (lower is better)
Translates to: AMGSRKCLLALASQA*SPERRPQEASSYCW
Trigger: CCAGCAGTATGAAGATGCTTCCTGCGGCCTTCTCTCCGGGCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCCCATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp GCAGATTTTTGGGGTCCAAAGCAATGGGCTCCCGTAAATGTTTGCTaGCTTTGGCCTCGCAGGCCTGGAGCCCGGAGAGAAGGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: ADFWGPKQWAPVNVC*LWPRRPGARREGRR
Trigger: CCTGCGGCCTTCTCTCCGGGCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCCCATTGCTTTGGACCCCAAAAATCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp GGAACTCTTCCAGCTTCTCGGTGGCTCCATCCACCTGCTCCTCCCTaGTTTTCGCCCGGTCCAGCAGCTTGTTGCACTGCTTGCTCAAGG +
Preference number: 5 (lower is better)
Translates to: GTLPASRWLHPPAPP*FSPGPAACCTACSR
Trigger: CCTTGAGCAAGCAGTGCAACAAGCTGCTGGACCGGGCGAAAACCAGGGAGGAGCAGGTGGATGGAGCCACCGAGAAGCTGGAAGAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TGGAGAACTCCTCCAGCTTACGGTGGAACTCTTCCAGCTTCTCGGTaGCTCCATCCACCTGCTCCTCCCTGGTTTTCGCCCGGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: WRTPPAYGGTLPASR*LHPPAPPWFSPGPA
Trigger: TGCTGGACCGGGCGAAAACCAGGGAGGAGCAGGTGGATGGAGCCACCGAGAAGCTGGAAGAGTTCCACCGTAAGCTGGAGGAGTTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp GCTCCACCTCCACCTTGTCCAGCCAGTTACACAGCTCCTTGTGCATaGACTGCAGCTGGCCGGCGAGCTGCAGAGCATGTTCTAGGGTCT +
Preference number: 5 (lower is better)
Translates to: APPPPCPASYTAPCA*TAAGRRAAEHVLGS
Trigger: AGACCCTAGAACATGCTCTGCAGCTCGCCGGCCAGCTGCAGTCCATGCACAAGGAGCTGTGTAACTGGCTGGACAAGGTGGAGGTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 90 bp TTCACCAATCTGCTCCTTGATCTTCTCCACCTCGGCGGAGATGGATaGCGGCTGCCGCAGACGCTCCGCAATGCGTTCCAGGCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: FTNLLLDLLHLGGDG*RLPQTLRNAFQALK
Trigger: CTTGAGAGCCTGGAACGCATTGCGGAGCGTCTGCGGCAGCCGCCATCCATCTCCGCCGAGGTGGAGAAGATCAAGGAGCAGATTGGTGAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 90 bp CCTCTGCCTGTTGCAGGGCTGACTCTAGCCGCGTCTGCTTTGATATaGAGAGTGCACACACGGTCTCCCAGCGGGTGCTTAGCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: PLPVAGLTLAASALI*RVHTRSPSGCLAPA
Trigger: TGCAGGAGCTAAGCACCCGCTGGGAGACCGTGTGTGCACTCTCCATATCAAAGCAGACGCGGCTAGAGTCAGCCCTGCAACAGGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp AGGTTAAGGTGCCCAGAGTTCCCAGGGGAGATCTCTGCAGGGTGGTaGCACTCTCTCCCTGCCGTATCAAAAGCCGACGCGAAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: RLRCPEFPGEISAGW*HSLPAVSKADAKVW
Trigger: CCACACCTTCGCGTCGGCTTTTGATACGGCAGGGAGAGAGTGCCACCACCCTGCAGAGATCTCCCCTGGGAACTCTGGGCACCTTAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTGTCCCGCTCATCTTaGTACCTCTCCAGGACATCC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLSRSS*YLSRTS
Trigger: GGATGTCCTGGAGAGGTACAAAGATGAGCGGGACAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGACCCAAGGCCTCTTaGCTCTGGATCACAGTCCAT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCRPKAS*LWITVH
Trigger: ATGGACTGTGATCCAGAGCAAAGAGGCCTTGGGTCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTTCTCTCTGTACTCTaGCTGACGCTCTGCCACAAC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVFLSVL*LTLCHN
Trigger: GTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTCTTGCTGCAAGACTaGGCAGCGTCTATCACCCTG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLLLQD*AASITL
Trigger: CAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTCTTGCTGCAAGACTaGGCAGCGTCTATCACCCTG +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLLLQD*AASITL
Trigger: CAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTCTTCCAGCTGCCTTaGCAGATTTTTGGGGTCCAA +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLFQLP*QIFGVQ
Trigger: TTGGACCCCAAAAATCTGCAAAGGCAGCTGGAAGAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTCTGGATGTCATTCTaGGCAGGAAGCAGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFWMSF*AGSSEP
Trigger: GGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTATCCTTCATTTTCGCTaGCAGGGAGGAGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCILHFR*QGGGCG
Trigger: TCCACAGCCTCCTCCCTGCAAGCGAAAATGAAGGAT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTGCCTCAAATGACTaGTTCTGCTCCACCTGCAAC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSASND*FCSTCN
Trigger: GTTGCAGGTGGAGCAGAACAAGTCATTTGAGGCAGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCCATGGTCAACTGGTaGAGCTCTTGCCACTTAGTG +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSMVNW*SSCHLV
Trigger: CACTAAGTGGCAAGAGCTCAACCAGTTGACCATGGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTCAAGTACTCCTCTTaGACCAGTGCCGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFKYSS*TSADRS
Trigger: GGACCTGTCGGCACTGGTCAAAGAGGAGTACTTGAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTCTGCTCTTCTTTCTaGGCGTCAAGCCATGCTTGG +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLCSSF*ASSHAW
Trigger: CCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGACGCTGAGCAGGCTATaGGCTGTGTTGTTCAGTAGT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVTLSRL*AVLFSS
Trigger: ACTACTGAACAACACAGCCAATAGCCTGCTCAGCGT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTGCATGCACGCCTTTaGCTTTCTCAGGGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLHARL*LSQGFC
Trigger: GCAGAAACCCTGAGAAAGCAAAAGGCGTGCATGCAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCCAGTTGACGGTTCCTaGCTTCAGCTCTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERPVDGS*LQLCSG
Trigger: TCCTGAGCAGAGCTGAAGCAAGGAACCGTCAACTGG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTCACCTGTGGTCTGTTaGAGCAGCTCTAAGCCGTTC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSPVVC*SSSKPF
Trigger: GAACGGCTTAGAGCTGCTCAAACAGACCACAGGTGA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTGTCTCTCTTGCACTaGACTGGCAGCTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLSLLH*TGSFSF
Trigger: AAAGGAGAAGCTGCCAGTCAAGTGCAAGAGAGACAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTATCACATCCAGCAGTTaGGCTTCCCGTTCTTCGACC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCITSSS*ASRSST
Trigger: GGTCGAAGAACGGGAAGCCAAACTGCTGGATGTGAT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTCTTGACAATGGGTTaGTCAGGCTCCCCACATGCA +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVFLTMG*SGSPHA
Trigger: TGCATGTGGGGAGCCTGACAAACCCATTGTCAAGAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGTACTGAACGGCAGCTaGCATGGCCTCTTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERVLNGS*HGLFQS
Trigger: AGACTGGAAGAGGCCATGCAAGCTGCCGTTCAGTAC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCTTCAATCTGCTGCTaGACGGTCTCCAGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSSICC*TVSRSV
Trigger: AACAGACCTGGAGACCGTCAAGCAGCAGATTGAAGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTCCGTCAGCCACTGTaGCAAATCTTCGATTTCACC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVRQPL*QIFDFT
Trigger: GGTGAAATCGAAGATTTGCAACAGTGGCTGACGGAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTATGTCTTGGTCAATGTaGGTCTCCGCAGATCGGGGA +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCMSWSM*VSADRG
Trigger: TCCCCGATCTGCGGAGACCAACATTGACCAAGACAT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGCCACGTTCAGAGTTaGCTCAGCCTGGGTAAGCCA +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSHVQS*LSLGKP
Trigger: TGGCTTACCCAGGCTGAGCAAACTCTGAACGTGGCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGCCACGTTCAGAGTTaGCTCAGCCTGGGTAAGCCA +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSHVQS*LSLGKP
Trigger: TGGCTTACCCAGGCTGAGCAAACTCTGAACGTGGCT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGGACCAGCTGGGCTTaGATTTTGTCTGGATCGTTG +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVWTSWA*ILSGSL
Trigger: CAACGATCCAGACAAAATCAAAGCCCAGCTGGTCCA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTGGCACACTTACACTaGGCTACCTGCCTTGTGACC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLAHLH*ATCLVT
Trigger: GGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGAAGACTTGTCTAATTaGCTGGCAGGTGACCTCCTC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVEDLSN*LAGDLL
Trigger: GAGGAGGTCACCTGCCAGCAAATTAGACAAGTCTTC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCCAAAAATCTTAGCATaGCACAGGGCCTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCPKILA*HRACWR
Trigger: CCTCCAGCAGGCCCTGTGCAATGCTAAGATTTTTGG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS TCA 90 bp GCCCGCGGACAGCAGTATCTCAAGCACTCGGATGGCCATGGATTCTaGGACCATGCCCTGAGCCAGAGAATCAAGCACGGGGATCGAGGT +
Preference number: 5 (lower is better)
Translates to: ARGQQYLKHSDGHGF*DHALSQRIKHGDRG
Trigger: ACCTCGATCCCCGTGCTTGATTCTCTGGCTCAGGGCATGGTCTCAGAATCCATGGCCATCCGAGTGCTTGAGATACTGCTGTCCGCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 90 bp AAGGGTCTTCCCCAGGCCTGCTCAGAATGCCCTGGCCAGCCGCTGTaGGCTGTTCATACTGAGGTTTCCGGGTGTCGAACTCTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: KGLPQACSECPGQPL*AVHTEVSGCRTLAA
Trigger: TGCTGCAAGAGTTCGACACCCGGAAACCTCAGTATGAACAGCTCACAGCGGCTGGCCAGGGCATTCTGAGCAGGCCTGGGGAAGACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp GTCCATGGTCAACTGGTTGAGCTCTTGCCACTTAGTGTCCATCTCTaGCAGTGCCTGCTTCCAGGACTGGGCCTCGGGAGCCTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: VHGQLVELLPLSVHL*QCLLPGLGLGSLWV
Trigger: AACCCAGAGGCTCCCGAGGCCCAGTCCTGGAAGCAGGCACTGGCAGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTTGACCATGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp ACCTCCACCTTGTCCAGCCAGTTACACAGCTCCTTGTGCATGGACTaGAGCTGGCCGGCGAGCTGCAGAGCATGTTCTAGGGTCTTCGCT +
Preference number: 5 (lower is better)
Translates to: TSTLSSQLHSSLCMD*SWPASCRACSRVFA
Trigger: AGCGAAGACCCTAGAACATGCTCTGCAGCTCGCCGGCCAGCTGCAGTCCATGCACAAGGAGCTGTGTAACTGGCTGGACAAGGTGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp GACCATGTCCAGCTCCTCCTGCAGGCCGTCAATCTCCTCTCTGATTaGCTCTGCAGCTTCCTGCTGCTGCTTTACGACCGAGGGGTCGAT +
Preference number: 5 (lower is better)
Translates to: DHVQLLLQAVNLLSD*LCSFLLLLYDRGVD
Trigger: ATCGACCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGCAGAGGCAATCAGAGAGGAGATTGACGGCCTGCAGGAGGAGCTGGACATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp TCGTTGAGCTTCCTCCTCCTTTCCAAGGCCAGGAGCCAGACCTGCTaGCACTTGCTCACCAGCAGGTTAACCCTGGGGTTCTTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: SLSFLLLSKARSQTC*HLLTSRLTLGFLVS
Trigger: CGAGACCAAGAACCCCAGGGTTAACCTGCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCTGGCCTTGGAAAGGAGGAGGAAGCTCAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp CAGAGTGGAAGCCTTTCCCTGACAGGTACCCGGGTAGTCGCAGCTTaGTTCCCTGGATTGGTGTGCCCTCTGCGGATGACACGGGAAAGT +
Preference number: 5 (lower is better)
Translates to: QSGSLSLTGTRVVAA*FPGLVCPLRMTRES
Trigger: ACTTTCCCGTGTCATCCGCAGAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGGGAAAGGCTTCCACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TGCTTCACCAGTCGCAGGAGCTCCTCCTCGTGGTCCCGCTTTCGTTaGAGTTCTTCCACCAGGGCCCGTTTCTGCTGTTCCAGATCACTG +
Preference number: 5 (lower is better)
Translates to: CFTSRRSSSSWSRFR*SSSTRARFCCSRSL
Trigger: CAGTGATCTGGAACAGCAGAAACGGGCCCTGGTGGAAGAACTGCAACGAAAGCGGGACCACGAGGAGGAGCTCCTGCGACTGGTGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp GGTTCATGCAGGAACTGTAGGACGGCGTTGTTCAGCAAGCCCTGCTaGACAGCCATTTCTGGAGGGACACGGACGCCTCTCACAGGGTCA +
Preference number: 5 (lower is better)
Translates to: GSCRNCRTALFSKPC*TAISGGTRTPLTGS
Trigger: TGACCCTGTGAGAGGCGTCCGTGTCCCTCCAGAAATGGCTGTGCAGCAGGGCTTGCTGAACAACGCCGTCCTACAGTTCCTGCATGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp GGAGCTTGCGGTGCCAGCAGCAGAAGAAGACGATGGTGGCGACGGTaGCCAGCAGGAGCAACAAGAGGAAGAGAGCACATTGGATGCTGT +
Preference number: 5 (lower is better)
Translates to: GACGASSRRRRWWRR*PAGATRGREHIGCC
Trigger: ACAGCATCCAATGTGCTCTCTTCCTCTTGTTGCTCCTGCTGGGCACCGTCGCCACCATCGTCTTCTTCTGCTGCTGGCACCGCAAGCTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CCA 90 bp TTTTGGGGTCCAAAGCAATGGGCTCCCGTAAATGTTTGCTGGCTTTaGCCTCGCAGGCCTGGAGCCCGGAGAGAAGGCCGCAGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: FWGPKQWAPVNVCWL*PRRPGARREGRRKH
Trigger: ATGCTTCCTGCGGCCTTCTCTCCGGGCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCCCATTGCTTTGGACCCCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TCCTTGATCTTCGGTGCCTGCTGCTCGATTTCCTGCTTCAGCCTCTaGGCTGCCTCCAGTTGTTGGTTCACGGCATCTGGCAGTGCGCCT +
Preference number: 5 (lower is better)
Translates to: SLIFGACCSISCFSL*AASSCWFTASGSAP
Trigger: AGGCGCACTGCCAGATGCCGTGAACCAACAACTGGAGGCAGCCCAGAGGCTGAAGCAGGAAATCGAGCAGCAGGCACCGAAGATCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp GGTCTGTGTGTCTGTGGGACGGTCTCCACGTCTGAGCACACAGACTaGATTTCTGAAATGTCAAAGTCGGACGCGTCGCTGCCTCGGCGG +
Preference number: 5 (lower is better)
Translates to: GLCVCGTVSTSEHTD*ISEMSKSDASLPRR
Trigger: CCGCCGAGGCAGCGACGCGTCCGACTTTGACATTTCAGAAATCCAGTCTGTGTGCTCAGACGTGGAGACCGTCCCACAGACACACAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TTATTGCTGACGGGGTGGCTGATCCCCGTGATCACTAATTCACACTaGCGTAGCTGCTGGGCGAAGCCCTCGTCCACCAGCCCTCTATGC +
Preference number: 5 (lower is better)
Translates to: LLLTGWLIPVITNSH*RSCWAKPSSTSPLC
Trigger: GCATAGAGGGCTGGTGGACGAGGGCTTCGCCCAGCAGCTACGCCAGTGTGAATTAGTGATCACGGGGATCAGCCACCCCGTCAGCAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTGTCCCGCTCATCTTaGTACCTCTCCAGGACATCC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLSRSS*YLSRTS
Trigger: GGATGTCCTGGAGAGGTACAAAGATGAGCGGGACAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCCCGACTCTAATCTTTaGGAATCAGACTGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVPDSNL*ESDWRA
Trigger: TGCTCTCCAGTCTGATTCCAAAAGATTAGAGTCGGG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCCAGCAAAGACGACTaGAGAAGGGGCTTTCGGATC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSSKDD*RRGFRI
Trigger: GATCCGAAAGCCCCTTCTCAAGTCGTCTTTGCTGGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCCACAATCTGATGTGTaGTCATTGCGGGAACCACCC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERPQSDV*SLREPP
Trigger: GGGTGGTTCCCGCAATGACAACACATCAGATTGTGG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATGATGTTCTCTTTCTaGGGGCTTCAGAGACAAGGC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVMMFSF*GLQRQG
Trigger: GCCTTGTCTCTGAAGCCCCAAGAAAGAGAACATCAT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGACCCAAGGCCTCTTaGCTCTGGATCACAGTCCAT +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNRPKAS*LWITVH
Trigger: ATGGACTGTGATCCAGAGCAAAGAGGCCTTGGGTCT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCAGCAGTTGTCTGCTTaGGCTGGGAGACAGATCTTG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERQQLSA*AGRQIL
Trigger: CAAGATCTGTCTCCCAGCCAAAGCAGACAACTGCTG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTCTTCCAGCTGCCTTaGCAGATTTTTGGGGTCCAA +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLFQLP*QIFGVQ
Trigger: TTGGACCCCAAAAATCTGCAAAGGCAGCTGGAAGAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCAGCAACCTGCTGACTaGATATCTGTCCTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVQQPAD*ISVLAK
Trigger: CTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCTG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGGTCACAGCTTCCAGTaGCTCGTTCACAATCCCATG +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNGHSFQ*LVHNPM
Trigger: CATGGGATTGTGAACGAGCAACTGGAAGCTGTGACC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTCAAGTACTCCTCTTaGACCAGTGCCGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFKYSS*TSADRS
Trigger: GGACCTGTCGGCACTGGTCAAAGAGGAGTACTTGAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTCTGCTCTTCTTTCTaGGCGTCAAGCCATGCTTGG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLCSSF*ASSHAW
Trigger: CCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTCTTCCAGAAGTCTTaGCAGAAGCTTCTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVFQKS*QKLLFL
Trigger: CAGGAACAGAAGCTTCTGCAAAGACTTCTGGAAGAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCACCTGTGGTCTGTTaGAGCAGCTCTAAGCCGTTC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSPVVC*SSSKPF
Trigger: GAACGGCTTAGAGCTGCTCAAACAGACCACAGGTGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTCTTTCTGTCTCTCTaGCACTTGACTGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVFFLSL*HLTGSF
Trigger: GAAGCTGCCAGTCAAGTGCAAGAGAGACAGAAAGAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGCACTGCTCACTTCATaGAGAGAATCCACTAAGGCT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVALLTS*RESTKA
Trigger: AGCCTTAGTGGATTCTCTCAATGAAGTGAGCAGTGC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGCAGAGGTCTGGTCTaGCTCAAGTCTGATGTCACC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSRGLV*LKSDVT
Trigger: GGTGACATCAGACTTGAGCAAGACCAGACCTCTGCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGCAGAGGTCTGGTCTaGCTCAAGTCTGATGTCACC +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSRGLV*LKSDVT
Trigger: GGTGACATCAGACTTGAGCAAGACCAGACCTCTGCT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTCTTGACAATGGGTTaGTCAGGCTCCCCACATGCA +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFLTMG*SGSPHA
Trigger: TGCATGTGGGGAGCCTGACAAACCCATTGTCAAGAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCGTCAATGCTCTTCTaGACAATGGGTTTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSSMLF*TMGLSG
Trigger: GCCTGACAAACCCATTGTCAAGAAGAGCATTGACGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCCTGGACTGTGTGCTaGTCTGCCTCCTCTGTTACT +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSWTVC*SASSVT
Trigger: AGTAACAGAGGAGGCAGACAAGCACACAGTCCAGGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGAGCACCCTCGAGCTaGTGCTGTCTGCTGACAATT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRAPSS*CCLLTI
Trigger: AATTGTCAGCAGACAGCACAAGCTCGAGGGTGCTCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGCTTGTACTGGAGGTaGCTTGCTTCTTCGCCTTCA +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSLYWR*LASSPS
Trigger: TGAAGGCGAAGAAGCAAGCAACCTCCAGTACAAGCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCCGTCAGCCACTGTaGCAAATCTTCGATTTCACC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCVRQPL*QIFDFT
Trigger: GGTGAAATCGAAGATTTGCAACAGTGGCTGACGGAC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAAGTCCTGGAGGGAGTaGTGGAAGTTCATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNKSWRE*WKFMAK
Trigger: CTTGGCCATGAACTTCCACAACTCCCTCCAGGACTT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAAGTCCTGGAGGGAGTaGTGGAAGTTCATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERKSWRE*WKFMAK
Trigger: CTTGGCCATGAACTTCCACAACTCCCTCCAGGACTT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGCCATTCCATCAGCTaGCTCCACGCTTCATGGAAC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSHSIS*LHASWN
Trigger: GTTCCATGAAGCGTGGAGCAAGCTGATGGAATGGCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGCCATTCCATCAGCTaGCTCCACGCTTCATGGAAC +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSHSIS*LHASWN
Trigger: GTTCCATGAAGCGTGGAGCAAGCTGATGGAATGGCT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTGTCCAGCTTCAGGTaGTCATCTGCCAGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLSSFR*SSAREV
Trigger: AACCTCCCTGGCAGATGACAACCTGAAGCTGGACAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTGTCCAGCTTCAGGTaGTCATCTGCCAGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLSSFR*SSAREV
Trigger: AACCTCCCTGGCAGATGACAACCTGAAGCTGGACAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCAGATGGTGTCCCATTaGTCCCTAAGTTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCQMVSH*SLSSLS
Trigger: GCTGAGTGAACTTAGGGACAAATGGGACACCATCTG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTACCTCGTCCTCAATTTaGTCAGCATCCGTGATGGGT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCTSSSI*SASVMG
Trigger: ACCCATCACGGATGCTGACAAAATTGAGGACGAGGT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCCCGCAGCTCCATGTaGGTCCTTCCTTTAGCTAGA +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSRSSM*VLPLAR
Trigger: TCTAGCTAAAGGAAGGACCAACATGGAGCTGCGGGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
CDS GCA 90 bp TGGACGTGTCAGCTCCGAGTTCTGTGCCGCAGCTTTCCAGAAGCATaGCCACGGCCTCATCCAAGTCTCCGTCATAGAGCAGAAGCCTCT +
Preference number: 5 (lower is better)
Translates to: WTCQLRVLCRSFPEA*PRPHPSLRHRAEAS
Trigger: AGAGGCTTCTGCTCTATGACGGAGACTTGGATGAGGCCGTGGGCATGCTTCTGGAAAGCTGCGGCACAGAACTCGGAGCTGACACGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 90 bp GGGCTCGCTGCAAAGTTCTCCGAGCTTCTCACCTCCTGGCAGTGCTaGTATGTGCACACTGAAGGGTTCTACCTCGGCTTCTCCTACAGC +
Preference number: 5 (lower is better)
Translates to: GLAAKFSELLTSWQC*YVHTEGFYLGFSYS
Trigger: GCTGTAGGAGAAGCCGAGGTAGAACCCTTCAGTGTGCACATAGCAGCACTGCCAGGAGGTGAGAAGCTCGGAGAACTTTGCAGCGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 90 bp AACTGGTTGAGCTCTTGCCACTTAGTGTCCATCTCTGCCAGTGCCTaGTTCCAGGACTGGGCCTCGGGAGCCTCTGGGTTCTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: NWLSSCHLVSISASA*FQDWASGASGFSSR
Trigger: TCTGGAAGAGAACCCAGAGGCTCCCGAGGCCCAGTCCTGGAAGCAGGCACTGGCAGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp CTACCACCGAGATCCCTTCCAGTTGACGGTTCCTTGCTTCAGCTCTaGTCAGGAGCGCTTCCCATCTACTGTCCAAGAGGCTCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LPPRSLPVDGSLLQL*SGALPIYCPRGSAA
Trigger: GGCAGCTGAGCCTCTTGGACAGTAGATGGGAAGCGCTCCTGAGCAGAGCTGAAGCAAGGAACCGTCAACTGGAAGGGATCTCGGTGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp GAGTGGAATTCCTCTGCCTGTTGCAGGGCTGACTCTAGCCGCGTCTaGTTTGATATGGAGAGTGCACACACGGTCTCCCAGCGGGTGCTT +
Preference number: 5 (lower is better)
Translates to: EWNSSACCRADSSRV*FDMESAHTVSQRVL
Trigger: AAGCACCCGCTGGGAGACCGTGTGTGCACTCTCCATATCAAAGCAGACGCGGCTAGAGTCAGCCCTGCAACAGGCAGAGGAATTCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TCTTTCTCTGCCTTCCTATTGGCCAAGGTCAGCTCATCCACCTGCTaGTTCAGCTCCTCCTCTTTCTGTCTGCCCTGCTCCCTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SFSAFLLAKVSSSTC*FSSSSFCLPCSLWG
Trigger: GCCCCAGAGGGAGCAGGGCAGACAGAAAGAGGAGGAGCTGAAGCAGCAGGTGGATGAGCTGACCTTGGCCAATAGGAAGGCAGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp GAAAAGACCGATTTCATCGGATGTCTCCCTTTCTGGAGCTTGCGGTaGCAGCAGCAGAAGAAGACGATGGTGGCGACGGTGCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: EKTDFIGCLPFWSLR*QQQKKTMVATVPSR
Trigger: CCTGCTGGGCACCGTCGCCACCATCGTCTTCTTCTGCTGCTGGCACCGCAAGCTCCAGAAAGGGAGACATCCGATGAAATCGGTCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CCA 90 bp GCCCTGCCACCACACTCCGGTACTGCAGGAGCTCCTCCTTTTCCATaGACTCCTGGACAAGGTCTTCCAGTTTGTGAATGCTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: ALPPHSGTAGAPPFP*TPGQGLPVCECCWT
Trigger: GGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGGAAAAGGAGGAGCTCCTGCAGTACCGGAGTGTGGTGGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000187486.7
CDS CCA 90 bp GAACAAGCAGGGGGCCCGCGGACAGCAGTATCTCAAGCACTCGGATaGCCATGGATTCTGAGACCATGCCCTGAGCCAGAGAATCAAGCA +
Preference number: 5 (lower is better)
Translates to: EQAGGPRTAVSQALG*PWILRPCPEPENQA
Trigger: TGCTTGATTCTCTGGCTCAGGGCATGGTCTCAGAATCCATGGCCATCCGAGTGCTTGAGATACTGCTGTCCGCGGGCCCCCTGCTTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp GTCCAACGTAGCCCCGCTGAGCCTCCAGAACCAGCAGCGCGCTGCTaGAAGTTATCAACTCACACTGTACTGCTTCGTCCACAGTCAGTC +
Preference number: 5 (lower is better)
Translates to: VQRSPAEPPEPAARC*KLSTHTVLLRPQSV
Trigger: GACTGACTGTGGACGAAGCAGTACAGTGTGAGTTGATAACTTCCAGCAGCGCGCTGCTGGTTCTGGAGGCTCAGCGGGGCTACGTTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp ATGCTCTGGGGGCTCGCTGCAAAGTTCTCCGAGCTTCTCACCTCCTaGCAGTGCTGCTATGTGCACACTGAAGGGTTCTACCTCGGCTTC +
Preference number: 5 (lower is better)
Translates to: MLWGLAAKFSELLTS*QCCYVHTEGFYLGF
Trigger: GAAGCCGAGGTAGAACCCTTCAGTGTGCACATAGCAGCACTGCCAGGAGGTGAGAAGCTCGGAGAACTTTGCAGCGAGCCCCCAGAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp TCTTCAGCCTTCTGGAGCAGAGTGGAGAACTCCTCCAGCTTACGGTaGAACTCTTCCAGCTTCTCGGTGGCTCCATCCACCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSAFWSRVENSSSLR*NSSSFSVAPSTCSS
Trigger: GGAGGAGCAGGTGGATGGAGCCACCGAGAAGCTGGAAGAGTTCCACCGTAAGCTGGAGGAGTTCTCCACTCTGCTCCAGAAGGCTGAAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp ACCTTGTCCAGCCAGTTACACAGCTCCTTGTGCATGGACTGCAGCTaGCCGGCGAGCTGCAGAGCATGTTCTAGGGTCTTCGCTACATCG +
Preference number: 5 (lower is better)
Translates to: TLSSQLHSSLCMDCS*PASCRACSRVFATS
Trigger: CGATGTAGCGAAGACCCTAGAACATGCTCTGCAGCTCGCCGGCCAGCTGCAGTCCATGCACAAGGAGCTGTGTAACTGGCTGGACAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 90 bp ATCACCAAGTCAATGTCCCCGTGGACAGGCTGGTCTTCTGCCAGCTaGGGCTCAACTCGATACAGCCAATCAATGAGGGCCTGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: ITKSMSPWTGWSSAS*GSTRYSQSMRACRA
Trigger: TGCCCTGCAGGCCCTCATTGATTGGCTGTATCGAGTTGAGCCCCAGCTGGCAGAAGACCAGCCTGTCCACGGGGACATTGACTTGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp GTTTACCATAATTGCGTGTTAAAGGATGGAGAATCTTGGGTGTGCTaGCGGCAGCAGGCACCGGTGGGGAGGCTGCCTGGCAGGCATGAC +
Preference number: 5 (lower is better)
Translates to: VYHNCVLKDGESWVC*RQQAPVGRLPGRHD
Trigger: GTCATGCCTGCCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGATTCTCCATCCTTTAACACGCAATTATGGTAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CCA 90 bp CCAACCATGGTTTACCATAATTGCGTGTTAAAGGATGGAGAATCTTaGGTGTGCTGGCGGCAGCAGGCACCGGTGGGGAGGCTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: PTMVYHNCVLKDGES*VCWRQQAPVGRLPG
Trigger: GCCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGATTCTCCATCCTTTAACACGCAATTATGGTAAACCATGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CCA 90 bp TTTAGGTTAAGGTGCCCAGAGTTCCCAGGGGAGATCTCTGCAGGGTaGTGGCACTCTCTCCCTGCCGTATCAAAAGCCGACGCGAAGGTG +
Preference number: 5 (lower is better)
Translates to: FRLRCPEFPGEISAG*WHSLPAVSKADAKV
Trigger: CACCTTCGCGTCGGCTTTTGATACGGCAGGGAGAGAGTGCCACCACCCTGCAGAGATCTCCCCTGGGAACTCTGGGCACCTTAACCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGTTCGGATGATAACCTaGAAGGAGTTTGATGCGCCC +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNVRMIT*KEFDAP
Trigger: GGGCGCATCAAACTCCTTCAAGGTTATCATCCGAAC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCCCGACTCTAATCTTTaGGAATCAGACTGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCPDSNL*ESDWRA
Trigger: TGCTCTCCAGTCTGATTCCAAAAGATTAGAGTCGGG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTCGATGAGAGTTGTTaGCCAAGACACACTCATCGT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLDESC*PRHTHR
Trigger: ACGATGAGTGTGTCTTGGCAAACAACTCTCATCGAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAAAACCGATGCTGTGTaGTTATCTATGATCCCCAGC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVKTDAV*LSMIPS
Trigger: GCTGGGGATCATAGATAACAACACAGCATCGGTTTT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGAACCACCCTCTTCTaGCCTGTAATCATGAACTGT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVRTTLF*PVIMNC
Trigger: ACAGTTCATGATTACAGGCAAGAAGAGGGTGGTTCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGATGCCTGGAGTTTCTaGGGGAGGTTGGTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNDAWSF*GRLVLL
Trigger: AAGCAAAACCAACCTCCCCAAGAAACTCCAGGCATC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGTTTCCAGCTGCATTTaGGTATGTGAAAGGTCTGCT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVVSSCI*VCERSA
Trigger: AGCAGACCTTTCACATACCAAAATGCAGCTGGAAAC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGCTGGGAGACAGATCTaGTGCATAATCAGAGATGAA +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVAGRQI*CIIRDE
Trigger: TTCATCTCTGATTATGCACAAGATCTGTCTCCCAGC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTTCTCTCTGTACTCTaGCTGACGCTCTGCCACAAC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFLSVL*LTLCHN
Trigger: GTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTTTCTATCTTGGTTTaGCTCTCTTCCAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVFSILV*LSSSCL
Trigger: GAGGCAGCTGGAAGAGAGCAAAACCAAGATAGAAAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCCAGCAGGTTACCATaGACTTCATCCTCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSSRLP*TSSSSP
Trigger: TGGCGAAGAGGATGAAGTCAATGGTAACCTGCTGGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGCCTTTGCAGATTTTaGGGGTCCAAAGCAATGGGC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERCLCRF*GSKAMG
Trigger: GCCCATTGCTTTGGACCCCAAAAATCTGCAAAGGCA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTAACCACTGCATCATaGCACTGGACTCTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLTTAS*HWTLPE
Trigger: CTCAGGAAGAGTCCAGTGCAATGATGCAGTGGTTAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTCTTCCAGCTTTTGTaGCCTGTCCATGGTCAACTG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLFQLL*PVHGQL
Trigger: CAGTTGACCATGGACAGGCAACAAAAGCTGGAAGAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGGACTCTTCCAGCTTTaGTTGCCTGTCCATGGTCAA +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNGLFQL*LPVHGQ
Trigger: TTGACCATGGACAGGCAACAAAAGCTGGAAGAGTCC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGTGTGTTCAACATGTTaGGGTCAATGGACAAGGGGC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERVCSTC*GQWTRG
Trigger: GCCCCTTGTCCATTGACCCAAACATGTTGAACACAC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTGGTACTGTGTGCTTTaGACGATAGCCTGGTCAATC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCWYCVL*TIAWSI
Trigger: GATTGACCAGGCTATCGTCAAAAGCACACAGTACCA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGCTCAGTGAAAGTTTaGCCAAAGTCTTTCTGCGAG +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVCSVKV*PKSFCE
Trigger: CTCGCAGAAAGACTTTGGCAAAACTTTCACTGAGCA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTCCACTAAGGCTTTGTaGCTCCTGACTTCGTTTTTC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSTKAL*LLTSFF
Trigger: GAAAAACGAAGTCAGGAGCAACAAAGCCTTAGTGGA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCACTGCTCACTTCATaGAGAGAATCCACTAAGGCT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCALLTS*RESTKA
Trigger: AGCCTTAGTGGATTCTCTCAATGAAGTGAGCAGTGC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGCTGTGGCCCAGTCTaGTTCATCTTATCTATGTGT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVSCGPV*FILSMC
Trigger: ACACATAGATAAGATGAACAAGACTGGGCCACAGCT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGACATCTTCTTTAATTaGACTGTAGAGGGTGTCGGC +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVDIFFN*TVEGVG
Trigger: GCCGACACCCTCTACAGTCAAATTAAAGAAGATGTC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTCTTGACAATGGGTTaGTCAGGCTCCCCACATGCA +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFLTMG*SGSPHA
Trigger: TGCATGTGGGGAGCCTGACAAACCCATTGTCAAGAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCTTCAATCTGCTGCTaGACGGTCTCCAGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSSICC*TVSRSV
Trigger: AACAGACCTGGAGACCGTCAAGCAGCAGATTGAAGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTGAGAATTCTGAGCTaGTACTGGAGGTTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLRILS*YWRLLA
Trigger: AGCAAGCAACCTCCAGTACAAGCTCAGAATTCTCAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTCTTCTCGTTGAGTTaGCTCTTCACGGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFFSLS*LFTDSH
Trigger: GTGGGAATCCGTGAAGAGCAAACTCAACGAGAAGAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTGGACCAGCTGGGCTTaGATTTTGTCTGGATCGTTG +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNWTSWA*ILSGSL
Trigger: CAACGATCCAGACAAAATCAAAGCCCAGCTGGTCCA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCAGATGGTGTCCCATTaGTCCCTAAGTTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNQMVSH*SLSSLS
Trigger: GCTGAGTGAACTTAGGGACAAATGGGACACCATCTG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTAACCCTGGGGTTCTaGGTCTCGATTTGCGTCTGT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLTLGF*VSICVC
Trigger: ACAGACGCAAATCGAGACCAAGAACCCCAGGGTTAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTAACCCTGGGGTTCTaGGTCTCGATTTGCGTCTGT +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLTLGF*VSICVC
Trigger: ACAGACGCAAATCGAGACCAAGAACCCCAGGGTTAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGAAGACTTGTCTAATTaGCTGGCAGGTGACCTCCTC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCEREDLSN*LAGDLL
Trigger: GAGGAGGTCACCTGCCAGCAAATTAGACAAGTCTTC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CCATCTCCAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGCGCGAAGGTGTGGTCTaGGGTTGTGCTCTTCTTTTG +
Preference number: 5 (lower is better)
Translates to: PSPASRVGGTFARSFGSQREGVV*GCALLL
Trigger: CAAAAGAAGAGCACAACCCAAGACCACACCTTCGCG...CTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTGGAGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp CCATCTCCAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGCCCTCCTGTACAGATTaGGGCTTCAAGGCATCTGAG +
Preference number: 5 (lower is better)
Translates to: PSPASRVGGTFARSFGSQPSCTD*GFKASE
Trigger: CTCAGATGCCTTGAAGCCCAAATCTGTACAGGAGGG...CTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTGGAGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGACAGCTTGCTCAGTTaGCCATGTACTTCATTCAGC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCDSLLS*PCTSFS
Trigger: GCTGAATGAAGTACATGGCAAACTGAGCAAGCTGTC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS TCA 90 bp GTAAGGAAGATGATGTGGGAAATATTTCACCAGAGTGGGGCCAGATaGGTCCAACGTAGCCCCGCTGAGCCTCCAGAACCAGCAGCGCGC +
Preference number: 5 (lower is better)
Translates to: VRKMMWEIFHQSGAR*VQRSPAEPPEPAAR
Trigger: GCGCGCTGCTGGTTCTGGAGGCTCAGCGGGGCTACGTTGGACTCATCTGGCCCCACTCTGGTGAAATATTTCCCACATCATCTTCCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 90 bp GTTCTCCGAGCTTCTCACCTCCTGGCAGTGCTGCTATGTGCACACTaGAGGGTTCTACCTCGGCTTCTCCTACAGCTTGTGGGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: VLRASHLLAVLLCAH*RVLPRLLLQLVGSG
Trigger: CCCTGAACCCACAAGCTGTAGGAGAAGCCGAGGTAGAACCCTTCAGTGTGCACATAGCAGCACTGCCAGGAGGTGAGAAGCTCGGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 90 bp CTGGCTAACGAGGGACTGTGCACGCTCCAGCTGCAGGTGCCTCTCTaGGTTGATCTGGCAGACGGCATCGTACTTCTTCAGTACCTTGTC +
Preference number: 5 (lower is better)
Translates to: LANEGLCTLQLQVPL*VDLADGIVLLQYLV
Trigger: GACAAGGTACTGAAGAAGTACGATGCCGTCTGCCAGATCAACTCAGAGAGGCACCTGCAGCTGGAGCGTGCACAGTCCCTCGTTAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 90 bp TGCTGTCTCCTCAGAGTCTCGTACTCCAGGGCTGGGGCAGGCAGCTaGGAGATGATTCGTTGTGTTTCCGTTAGCCAGGGCCAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: CCLLRVSYSRAGAGS*EMIRCVSVSQGQSS
Trigger: GGAACTTTGGCCCTGGCTAACGGAAACACAACGAATCATCTCTCAGCTGCCTGCCCCAGCCCTGGAGTACGAGACTCTGAGGAGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 90 bp TCTCCATGTCCACGGACACGCTCTTATTTTCACCAATCTGCTCCTTaGTCTTCTCCACCTCGGCGGAGATGGATGGCGGCTGCCGCAGAC +
Preference number: 5 (lower is better)
Translates to: SPCPRTRSYFHQSAP*SSPPRRRWMAAAAD
Trigger: GTCTGCGGCAGCCGCCATCCATCTCCGCCGAGGTGGAGAAGATCAAGGAGCAGATTGGTGAAAATAAGAGCGTGTCCGTGGACATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 90 bp TCAGCAGCCCTGTGCGGCCATTTTCCTTCTGTCTGGTGTGGCTCCTaGGTCCACCTGGACAGTGGGAGTCTGGTCTTTAGGTTAAGGTGC +
Preference number: 5 (lower is better)
Translates to: SAALCGHFPSVWCGS*VHLDSGSLVFRLRC
Trigger: GCACCTTAACCTAAAGACCAGACTCCCACTGTCCAGGTGGACTCAGGAGCCACACCAGACAGAAGGAAAATGGCCGCACAGGGCTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp ACAGCAGTATCTCAAGCACTCGGATGGCCATGGATTCTGAGACCATaGCCTGAGCCAGAGAATCAAGCACGGGGATCGAGGTCGGCGATG +
Preference number: 5 (lower is better)
Translates to: TAVSQALGWPWILRP*PEPENQARGSRSAM
Trigger: CATCGCCGACCTCGATCCCCGTGCTTGATTCTCTGGCTCAGGGCATGGTCTCAGAATCCATGGCCATCCGAGTGCTTGAGATACTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 90 bp TGTGGCTCCTCCTCAGCGCTTGCTTTCTCTCTGCTGCTTTCTAACTaGGGGCAGCCCACGTCTAAAGTGTCAGCGGAGGTGTGTCTCACT +
Preference number: 5 (lower is better)
Translates to: CGSSSALAFSLLLSN*GQPTSKVSAEVCLT
Trigger: AGTGAGACACACCTCCGCTGACACTTTAGACGTGGGCTGCCCGCAGTTAGAAAGCAGCAGAGAGAAAGCAAGCGCTGAGGAGGAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 90 bp CTGCTCCTCCAGCTTTGGTGCCTGGGTTCCTATGGGCTCCGAGTTTaGCAGCTTCTTTTCTACAGCTGTGAGCCACTCGTTCAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: LLLQLWCLGSYGLRV*QLLFYSCEPLVQWL
Trigger: GAGCCACTGAACGAGTGGCTCACAGCTGTAGAAAAGAAGCTGGCAAACTCGGAGCCCATAGGAACCCAGGCACCAAAGCTGGAGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp TCCCAGAACTGGCTAACGAGGGACTGTGCACGCTCCAGCTGCAGGTaGCTCTCTGAGTTGATCTGGCAGACGGCATCGTACTTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: SQNWLTRDCARSSCR*LSELIWQTASYFFS
Trigger: ACTGAAGAAGTACGATGCCGTCTGCCAGATCAACTCAGAGAGGCACCTGCAGCTGGAGCGTGCACAGTCCCTCGTTAGCCAGTTCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp TCTTTTTCAGTGCCCTCGGATCTGGCGATCATCTCCTCTCCCCTCTaGCTCAGAGTCTCGTATAGCGGCTGCAGCTTCTCCATGTCCACG +
Preference number: 5 (lower is better)
Translates to: SFSVPSDLAIISSPL*LRVSYSGCSFSMST
Trigger: CGTGGACATGGAGAAGCTGCAGCCGCTATACGAGACTCTGAGGCAGAGGGGAGAGGAGATGATCGCCAGATCCGAGGGCACTGAAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp GGTGATGTCTTGGTCAATGTTGGTCTCCGCAGATCGGGGACACCTTaGAAGCATCTGCTGCCCCCTCAGCATCAGGCTCTTGTACGTCTC +
Preference number: 5 (lower is better)
Translates to: GDVLVNVGLRRSGTP*KHLLPPQHQALVRL
Trigger: GAGACGTACAAGAGCCTGATGCTGAGGGGGCAGCAGATGCTTGCAAGGTGTCCCCGATCTGCGGAGACCAACATTGACCAAGACATCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp CGCCCTCTCTCTACCAGGCGCTGCACCACCTTTTCCCACCGACTCTaGACGCTGATGAGCAGGTTCTTGATGAGCACGACATCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: RPLSTRRCTTFSHRL*TLMSRFLMSTTSCF
Trigger: GAAACAAGATGTCGTGCTCATCAAGAACCTGCTCATCAGCGTGCAGAGTCGGTGGGAAAAGGTGGTGCAGCGCCTGGTAGAGAGAGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp CAGGTTCATCACCAAGTCAATGTCCCCGTGGACAGGCTGGTCTTCTaGCAGCTGGGGCTCAACTCGATACAGCCAATCAATGAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: QVHHQVNVPVDRLVF*QLGLNSIQPINEGL
Trigger: CAGGCCCTCATTGATTGGCTGTATCGAGTTGAGCCCCAGCTGGCAGAAGACCAGCCTGTCCACGGGGACATTGACTTGGTGATGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp ATGGTTTACCATAATTGCGTGTTAAAGGATGGAGAATCTTGGGTGTaGTGGCGGCAGCAGGCACCGGTGGGGAGGCTGCCTGGCAGGCAT +
Preference number: 5 (lower is better)
Translates to: MVYHNCVLKDGESWV*WRQQAPVGRLPGRH
Trigger: ATGCCTGCCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGATTCTCCATCCTTTAACACGCAATTATGGTAAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS GCA 90 bp CTTCTGCTCTTCCCGCCGCTTCTCCTCTTTGGACGCGCTCAGTTCTaGGCTCAGGCTCCTCACCTCCTTCTCCGTTTTCTGGATGATCAT +
Preference number: 5 (lower is better)
Translates to: LLLFPPLLLFGRAQF*AQAPHLLLRFLDDH
Trigger: ATGATCATCCAGAAAACGGAGAAGGAGGTGAGGAGCCTGAGCGCAGAACTGAGCGCGTCCAAAGAGGAGAAGCGGCGGGAAGAGCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp TCTTTCCTGATAGCAGTGTACAACTGGGTAGGGTCAGCTTGGTACTaGGGCTCTCCACCCTCATCTGCTACTCCTTGTCCTCCTCGCCCG +
Preference number: 5 (lower is better)
Translates to: SFLIAVYNWVGSAWY*GSPPSSATPCPPRP
Trigger: CGGGCGAGGAGGACAAGGAGTAGCAGATGAGGGTGGAGAGCCCCAGTACCAAGCTGACCCTACCCAGTTGTACACTGCTATCAGGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp TCTGTACCTACGGGGCCCTGGGACTCTTCGTGTTCTTCAGCCTTCTaGAGCAGAGTGGAGAACTCCTCCAGCTTACGGTGGAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: SVPTGPWDSSCSSAF*SRVENSSSLRWNSS
Trigger: GGAAGAGTTCCACCGTAAGCTGGAGGAGTTCTCCACTCTGCTCCAGAAGGCTGAAGAACACGAAGAGTCCCAGGGCCCCGTAGGTACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp CTGGAACGACCCGAAAAGACCGATTTCATCGGATGTCTCCCTTTCTaGAGCTTGCGGTGCCAGCAGCAGAAGAAGACGATGGTGGCGACG +
Preference number: 5 (lower is better)
Translates to: LERPEKTDFIGCLPF*SLRCQQQKKTMVAT
Trigger: CGTCGCCACCATCGTCTTCTTCTGCTGCTGGCACCGCAAGCTCCAGAAAGGGAGACATCCGATGAAATCGGTCTTTTCGGGTCGTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CCA 90 bp CTGCCACCACACTCCGGTACTGCAGGAGCTCCTCCTTTTCCTCCATaGACTCCTGGACAAGGTCTTCCAGTTTGTGAATGCTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: LPPHSGTAGAPPFPP*TPGQGLPVCECCWT
Trigger: GGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGGAGGAAAAGGAGGAGCTCCTGCAGTACCGGAGTGTGGTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000185897.7
CDS CCA 90 bp GGGGGCTGCATAAGCCAGAGTCCTCCTCTTCTGAAGTTTGAGAGTTaGTACCCCATCTGCACTTGCTGGCCTTCGCGACAGCATCTGACG +
Preference number: 5 (lower is better)
Translates to: GGCISQSPPLLKFES*YPICTCWPSRQHLT
Trigger: CGTCAGATGCTGTCGCGAAGGCCAGCAAGTGCAGATGGGGTACCAACTCTCAAACTTCAGAAGAGGAGGACTCTGGCTTATGCAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS-3UTR CAA 90 bp TCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCCTGATATCATGAGCTaGGTCTGTTCCGTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: SRVGGTFARSFGSQSCGAPDIMS*VCSVVS
Trigger: GCTGACCACGGAACAGACCAAGCTCATGATATCAGG...AGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp GGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTTCCAGCAAAGACGACTaGAGAAGGGGCTTTCGGATC +
Preference number: 5 (lower is better)
Translates to: GSGALLHVPLDPSPVVLCSSKDD*RRGFRI
Trigger: GATCCGAAAGCCCCTTCTCAAGTCGTCTTTGCTGGA...ACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCTCGATGAGAGTTGTTaGCCAAGACACACTCATCGT +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLDESC*PRHTHR
Trigger: ACGATGAGTGTGTCTTGGCAAACAACTCTCATCGAG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAAGTCAACTGCTTCTTaGTTTGGTGGGGGAACAGTA +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCKSTAS*FGGGTV
Trigger: TACTGTTCCCCCACCAAACAAAGAAGCAGTTGACTT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTATACACAGATTCCTCTaGCTCCTCTCTTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCIHRFL*LLSFCR
Trigger: TCTGCAGAAAGAGAGGAGCAAGAGGAATCTGTGTAT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGGGTCAATAAGATCTTaGCAAGTGTCTTGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVGSIRS*QVSCLS
Trigger: AGAAAGGCAAGACACTTGCAAAGATCTTATTGACCC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTGGACATTCACAGTTaGAATGGCCTTCACAGATCT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLDIHS*NGLHRS
Trigger: AGATCTGTGAAGGCCATTCAAACTGTGAATGTCCAA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTTTCCAGCTGCATTTaGGTATGTGAAAGGTCTGCT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCVSSCI*VCERSA
Trigger: AGCAGACCTTTCACATACCAAAATGCAGCTGGAAAC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTTTCTATCTTGGTTTaGCTCTCTTCCAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFSILV*LSSSCL
Trigger: GAGGCAGCTGGAAGAGAGCAAAACCAAGATAGAAAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAAATGTTTGCTGGCTTaGGCCTCGCAGGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEKCLLA*ASQAWS
Trigger: GCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTCTTCCTGAGCCTTTaGCAATTTGGAGAGCTTAGT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLFLSL*QFGELS
Trigger: ACTAAGCTCTCCAAATTGCAAAAGGCTCAGGAAGAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTGGTACTGTGTGCTTTaGACGATAGCCTGGTCAATC +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNWYCVL*TIAWSI
Trigger: GATTGACCAGGCTATCGTCAAAAGCACACAGTACCA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGGCGTCAAGCCATGCTaGGAAATCCTTAGACATTTG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERGVKPC*EILRHL
Trigger: CAAATGTCTAAGGATTTCCAAGCATGGCTTGACGCC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCCGCAGAGTCTCCACTaGCTCTCTGTACTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEPQSLH*LSVLEG
Trigger: GCCCTCAAGTACAGAGAGCAAGTGGAGACTCTGCGG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGTGGCCAGCATCATCTaGCAGGTTCTGTTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEVASII*QVLLAL
Trigger: CAGCGCCAACAGAACCTGCAAGATGATGCTGGCCAC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGCGGACGGAGGCTTTaGATTGGCCACAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESGRRL*IGHKLL
Trigger: GAGGAGCTTGTGGCCAATCAAAAGCCTCCGTCCGCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGTCTTCCAGAAGTCTTaGCAGAAGCTTCTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERVFQKS*QKLLFL
Trigger: CAGGAACAGAAGCTTCTGCAAAGACTTCTGGAAGAC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTCTTTCTGTCTCTCTaGCACTTGACTGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNFFLSL*HLTGSF
Trigger: GAAGCTGCCAGTCAAGTGCAAGAGAGACAGAAAGAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTCTTTCTGTCTCTCTaGCACTTGACTGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFFLSL*HLTGSF
Trigger: GAAGCTGCCAGTCAAGTGCAAGAGAGACAGAAAGAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGCACTGCTCACTTCATaGAGAGAATCCACTAAGGCT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERALLTS*RESTKA
Trigger: AGCCTTAGTGGATTCTCTCAATGAAGTGAGCAGTGC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCCAGCTTTTTCTTCATaGACTGCTTCTCCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCPAFSS*TASPLH
Trigger: GTGAAGAGGAGAAGCAGTCAATGAAGAAAAAGCTGG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTGCCGGTGCTCCTCTaGCTGTCTCCTCAGAGTCTC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELPVLL*LSPQSL
Trigger: GAGACTCTGAGGAGACAGCAAGAGGAGCACCGGCAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGCTGTGGCCCAGTCTaGTTCATCTTATCTATGTGT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCSCGPV*FILSMC
Trigger: ACACATAGATAAGATGAACAAGACTGGGCCACAGCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTATAAATGCCTTCCTTaGGGCTCAGTTCCAATAGCT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVYKCLP*GSVPIA
Trigger: AGCTATTGGAACTGAGCCCAAAGGAAGGCATTTATA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTCGTCAATGCTCTTCTaGACAATGGGTTTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSSMLF*TMGLSG
Trigger: GCCTGACAAACCCATTGTCAAGAAGAGCATTGACGA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGATCATTTCCTGCTTaGTTGACGGCTTCTACCGTG +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNRSFPA*LTASTV
Trigger: CACGGTAGAAGCCGTCAACAAAGCAGGAAATGATCT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGATCATTTCCTGCTTaGTTGACGGCTTCTACCGTG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRSFPA*LTASTV
Trigger: CACGGTAGAAGCCGTCAACAAAGCAGGAAATGATCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCGTTAAGCTGCTCCTaGGCTGTCTCTGGGAGACCT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEALSCS*AVSGRP
Trigger: AGGTCTCCCAGAGACAGCCAAGGAGCAGCTTAACGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGCTTCATGGAACTGCTaGGCCCTCTTCCTGGCTTCG +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEASWNC*ALFLAS
Trigger: CGAAGCCAGGAAGAGGGCCAAGCAGTTCCATGAAGC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGTTCACTCAGCATGTaGTCCAGCTTCAGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERSSLSM*SSFRLS
Trigger: TGACAACCTGAAGCTGGACAACATGCTGAGTGAACT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGTTCACTCAGCATGTaGTCCAGCTTCAGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSSLSM*SSFRLS
Trigger: TGACAACCTGAAGCTGGACAACATGCTGAGTGAACT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCAGGGAGTTGACATTTaGCTGTTTGCCAACCATGGT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERQGVDI*LFANHG
Trigger: ACCATGGTTGGCAAACAGCAAAATGTCAACTCCCTG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCAGGGAGTTGACATTTaGCTGTTTGCCAACCATGGT +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNQGVDI*LFANHG
Trigger: ACCATGGTTGGCAAACAGCAAAATGTCAACTCCCTG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TCGCTATGCAGAGGACATCACTGCCTGCAGGTAGCCATCTCCAGCCTCACGGGTGGTGTGCCTGAGCCCTaGAAACTGAAACTCCTCATC +
Preference number: 5 (lower is better)
Translates to: SLCRGHHCLQVAISSLTGGVPEP*KLKLLI
Trigger: GATGAGGAGTTTCAGTTTCAAGGGCTCAGGCACACC...ACCCGTGAGGCTGGAGATGGCTACCTGCAGGCAGTGATGTCCTCTGCATAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp AGTATCTCAAGCACTCGGATGGCCATGGATTCTGAGACCATGCCCTaGGCCAGAGAATCAAGCACGGGGATCGAGGTCGGCGATGCAGTA +
Preference number: 5 (lower is better)
Translates to: SISSTRMAMDSETMP*ARESSTGIEVGDAV
Trigger: TACTGCATCGCCGACCTCGATCCCCGTGCTTGATTCTCTGGCTCAGGGCATGGTCTCAGAATCCATGGCCATCCGAGTGCTTGAGATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 90 bp TTTGCCTCGTCTACCTGCTGTTTCAGGGTCTGCAGTGACTTCTGTTaGGCCTGCAGCACGGACAGGTGCTTGTTACTGTACGCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: FASSTCCFRVCSDFC*ACSTDRCLLLYAWG
Trigger: ACCCCAGGCGTACAGTAACAAGCACCTGTCCGTGCTGCAGGCTCAACAGAAGTCACTGCAGACCCTGAAACAGCAGGTAGACGAGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp GCTGAGACCTCAGAATGGCAGCGTCGATCTCCTCCACTTTCTGCGTaGTTGTGTCGCTCACCAGTCGGTAGCGTTCATTGTCCTCGGCAA +
Preference number: 5 (lower is better)
Translates to: AETSEWQRRSPPLSA*LCRSPVGSVHCPRQ
Trigger: TTGCCGAGGACAATGAACGCTACCGACTGGTGAGCGACACAATCACGCAGAAAGTGGAGGAGATCGACGCTGCCATTCTGAGGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 90 bp ACTGACCCAGTGCTAAGAGAGCACCCTCGAGCTTGTGCTGTCTGCTaGCAATTCGCTCGTCCAGGCTGTCCCAGATCAACTTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: TDPVLREHPRACAVC*QFARPGCPRSTSAP
Trigger: TGGAGCTGAAGTTGATCTGGGACAGCCTGGACGAGCGAATTGTCAGCAGACAGCACAAGCTCGAGGGTGCTCTCTTAGCACTGGGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 90 bp GTGAGGAGATCACACAGCCCTTGGAGTTTCTCTCTGTACTCTTGCTaGCGCTCTGCCACAACCTTCTCCGGGACCTTCGACTCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: VRRSHSPWSFSLYSC*RSATTFSGTFDSPE
Trigger: CTCAGGAGAGTCGAAGGTCCCGGAGAAGGTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAACTCCAAGGGCTGTGTGATCTCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097786.10
ENSMUST00000185269.7
CDS TCA 90 bp CTCCCTCTGGGGCCGTGCCTGTGCCACCGCAGCGCTCTCTCTACATaGAAACTGAATTTCGGTGATTTTCCTTCTGGCTTCCAACTCGAC +
Preference number: 5 (lower is better)
Translates to: LPLGPCLCHRSALST*KLNFGDFPSGFQLD
Trigger: GTCGAGTTGGAAGCCAGAAGGAAAATCACCGAAATTCAGTTTTCATGTAGAGAGAGCGCTGCGGTGGCACAGGCACGGCCCCAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp ATCCGAAGCACAGCCCTCTCGGCTGGGTCCAGCACCGAGCCCCCTTaGATCTTTCTTTTGGATCTCTCATGCTTGGGCAAATTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: IRSTALSAGSSTEPP*IFLLDLSCLGKFQG
Trigger: ACCCTGGAATTTGCCCAAGCATGAGAGATCCAAAAGAAAGATTCAAGGGGGCTCGGTGCTGGACCCAGCCGAGAGGGCTGTGCTTCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
ENSMUST00000183034.5
ENSMUST00000187486.7
CDS GCA 90 bp GCTCCCGCATCAGCTCCGCGTGGTAGCTTTTCTTCCGGGCGACACTaGTGTTTCTCTCACTCCAATCATAAGCAACTTCCGACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: APASAPRGSFSSGRH*CFSHSNHKQLPTPP
Trigger: AGGAGGAGTCGGAAGTTGCTTATGATTGGAGTGAGAGAAACAGCAGTGTCGCCCGGAAGAAAAGCTACCACGCGGAGCTGATGCGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 90 bp ATCACACAGCCCTTGGAGTTTCTCTCTGTACTCTTGCTGACGCTCTaGCACAACCTTCTGATGACCCAGCTCCTGCTCCAGCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: ITQPLEFLSVLLLTL*HNLLMTQLLLQLQE
Trigger: CTCCTGCAGCTGGAGCAGGAGCTGGGTCATCAGAAGGTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAACTCCAAGGGCTGTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS GCA 90 bp CGGAAGTCTCGACGCTGTCCTTGCCGATCCTGTCACTGTCTCTCTTaGTGCAAGACTTGGCAGCGTCTATCACCCTGTTTCCGGAAATGG +
Preference number: 5 (lower is better)
Translates to: RKSRRCPCRSCHCLS*CKTWQRLSPCFRKW
Trigger: CCATTTCCGGAAACAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGAGAGACAGTGACAGGATCGGCAAGGACAGCGTCGAGACTTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TGGTCTGAACTTCTCTGTGGGTTGCGGAAGTCTCGACGCTGTCCTTaGCGATCCTGTCACTGTCTCTCTTGCTGCAAGACTTGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: WSELLCGLRKSRRCP*RSCHCLSCCKTWQR
Trigger: ACGCTGCCAAGTCTTGCAGCAAGAGAGACAGTGACAGGATCGGCAAGGACAGCGTCGAGACTTCCGCAACCCACAGAGAAGTTCAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp GCGGTCTGTAACCTGGTCCAGTTTGGTCTGAACTTCTCTGTGGGTTaGGGAAGTCTCGACGCTGTCCTTGCCGATCCTGTCACTGTCTCT +
Preference number: 5 (lower is better)
Translates to: AVCNLVQFGLNFSVG*GSLDAVLADPVTVS
Trigger: AGAGACAGTGACAGGATCGGCAAGGACAGCGTCGAGACTTCCGCAACCCACAGAGAAGTTCAGACCAAACTGGACCAGGTTACAGACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp CAAGAGGCTCAGCTGCCTCGTGAGCTTCACTCTGTCCGCAGGCTCTaGCGAAGCAGCGATTTTCTCTCCTTCTCTTTTGATCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: QEAQLPRELHSVRRL*RSSDFLSFSFDHLH
Trigger: GTGGAGGTGATCAAAAGAGAAGGAGAGAAAATCGCTGCTTCGGCAGAGCCTGCGGACAGAGTGAAGCTCACGAGGCAGCTGAGCCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp TGCAGCTTCTCCATGTCCACGGACACGCTCTTATTTTCACCAATCTaGTCCTTGATCTTCTCCACCTCGGCGGAGATGGATGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: CSFSMSTDTLLFSPI*SLIFSTSAEMDGGC
Trigger: GCAGCCGCCATCCATCTCCGCCGAGGTGGAGAAGATCAAGGAGCAGATTGGTGAAAATAAGAGCGTGTCCGTGGACATGGAGAAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp TCAATGTTGGTCTCCGCAGATCGGGGACACCTTGCAAGCATCTGCTaGCCCCTCAGCATCAGGCTCTTGTACGTCTCTTCCTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: SMLVSADRGHLASIC*PLSIRLLYVSSLMA
Trigger: TGCCATCAAGGAAGAGACGTACAAGAGCCTGATGCTGAGGGGGCAGCAGATGCTTGCAAGGTGTCCCCGATCTGCGGAGACCAACATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp TGGTCAATGTTGGTCTCCGCAGATCGGGGACACCTTGCAAGCATCTaGTGCCCCCTCAGCATCAGGCTCTTGTACGTCTCTTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: WSMLVSADRGHLASI*CPLSIRLLYVSSLM
Trigger: CATCAAGGAAGAGACGTACAAGAGCCTGATGCTGAGGGGGCAGCAGATGCTTGCAAGGTGTCCCCGATCTGCGGAGACCAACATTGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp CAGGCCAGCACCTCTTCAAACCTGGCCTGGATGATCGTGATCCAGTaGTTAATGGTGGTAATGGAGTCAGGGTGGCAGACGGCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: QASTSSNLAWMIVIQ*LMVVMESGWQTARR
Trigger: TCTTCTGGCCGTCTGCCACCCTGACTCCATTACCACCATTAAGCACTGGATCACGATCATCCAGGCCAGGTTTGAAGAGGTGCTGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TCGGCCCTCAGCTTCTGCAGGGCGATGTCTTCCACGTTCCTCTGTTaGTTCCTCAGTTCATTTTCGGCGGCCTCCTTAACTTTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: SALSFCRAMSSTFLC*FLSSFSAASLTFGS
Trigger: GCTTCCGAAAGTTAAGGAGGCCGCCGAAAATGAACTGAGGAAGCAACAGAGGAACGTGGAAGACATCGCCCTGCAGAAGCTGAGGGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp ATTTTCCTTCTGGCTTCCAACTCGACCTTCTGCTTTTCCTTCAGCTaGTTCTCGGCCACCTGCTTCTGGAAGGCCAGGTCCCGCTCCATC +
Preference number: 5 (lower is better)
Translates to: IFLLASNSTFCFSFS*FSATCFWKARSRSI
Trigger: GATGGAGCGGGACCTGGCCTTCCAGAAGCAGGTGGCCGAGAAGCAGCTGAAGGAAAAGCAGAAGGTCGAGTTGGAAGCCAGAAGGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp ATCTCTTTCTCTGCCTTCCTATTGGCCAAGGTCAGCTCATCCACCTaGTGCTTCAGCTCCTCCTCTTTCTGTCTGCCCTGCTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: ISFSAFLLAKVSSST*CFSSSSFCLPCSLW
Trigger: CCAGAGGGAGCAGGGCAGACAGAAAGAGGAGGAGCTGAAGCAGCAGGTGGATGAGCTGACCTTGGCCAATAGGAAGGCAGAGAAAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp CTGTCTGTAGTCGCAGATGGCTTTGATGGGGATGGACGTCTTGAGTaGGTTGTCAGGATTCCTCGGCTTCAGCTGCACCACTGTCTTCGC +
Preference number: 5 (lower is better)
Translates to: LSVVADGFDGDGRLE*VVRIPRLQLHHCLR
Trigger: GCGAAGACAGTGGTGCAGCTGAAGCCGAGGAATCCTGACAACCCACTCAAGACGTCCATCCCCATCAAAGCCATCTGCGACTACAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 90 bp ATCTGGGATTCCTGGCTATCCTCCAGGAAATCCTCCAAGCGGGACTaGAGATTACTGAGAACCTGCTGGTGCTCGCCAGGCAACATCGTC +
Preference number: 5 (lower is better)
Translates to: IWDSWLSSRKSSKRD*RLLRTCWCSPGNIV
Trigger: GACGATGTTGCCTGGCGAGCACCAGCAGGTTCTCAGTAATCTCCAGTCCCGCTTGGAGGATTTCCTGGAGGATAGCCAGGAATCCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 90 bp TCCTTCAGCAGCCGGGCCTTTTCCTCAGACGAGGCCTTTTCGAGCTaGACCGCGCTGAGTTCATACTTCAGCTCCCTCATCTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SFSSRAFSSDEAFSS*TALSSYFSSLISFS
Trigger: AGAGAAAGAGATGAGGGAGCTGAAGTATGAACTCAGCGCGGTCCAGCTCGAAAAGGCCTCGTCTGAGGAAAAGGCCCGGCTGCTGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp TATCTGCAGTTCAGTGCTTGTCTGAGAAAAATACTCCGAGTAGCATaGCTGGCTGCTCTCCCTGTCCAGCGGAGCCCCTGGCTGTCGGAA +
Preference number: 5 (lower is better)
Translates to: YLQFSACLRKILRVA*LAALPVQRSPWLSE
Trigger: TTCCGACAGCCAGGGGCTCCGCTGGACAGGGAGAGCAGCCAGCCATGCTACTCGGAGTATTTTTCTCAGACAAGCACTGAACTGCAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTACACTCTGATACTGTaGCTCAATTCTGTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVYTLIL*LNSVGK
Trigger: TTTGCCAACAGAATTGAGCAACAGTATCAGAGTGTA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCCTGTAGGTCATTGTTaGCAACTCATAGTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNPVGHC*QLIVLD
Trigger: GTCAAGGACTATGAGTTGCAAACAATGACCTACAGG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGGTCAATAAGATCTTaGCAAGTGTCTTGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCGSIRS*QVSCLS
Trigger: AGAAAGGCAAGACACTTGCAAAGATCTTATTGACCC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGTAACAGGCTCACTTaGACTTTTACAGCCTTTAAG +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVCNRLT*TFTAFK
Trigger: CTTAAAGGCTGTAAAAGTCAAAGTGAGCCTGTTACA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTTCAAGAGTCATGGTaGTTGTCATGGTTGTTGTGT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLQESW*LSWLLC
Trigger: ACACAACAACCATGACAACAACCATGACTCTTGAAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCCTGGTCTTTTTCAGTaGCATACCCATCAAACAGCA +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNPGLFQ*HTHQTA
Trigger: TGCTGTTTGATGGGTATGCAACTGAAAAAGACCAGG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCAGAAGACCTTTCTTTaGATCCAGATGTACTTTCTG +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVQKTFL*IQMYFL
Trigger: CAGAAAGTACATCTGGATCAAAAGAAAGGTCTTCTG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAAAACCCTTCTGGGTaGTATTTAAGAGTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCENPSG*YLRVSA
Trigger: TGCTGAGACTCTTAAATACAACCCAGAAGGGTTTTC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGAACTTCTCTGTGGGTaGCGGAAGTCTCGACGCTGT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEELLCG*RKSRRC
Trigger: ACAGCGTCGAGACTTCCGCAACCCACAGAGAAGTTC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCCTCTAGCTGTTCTTTaGTATCCTGAAGCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNPLAVL*YPEAAF
Trigger: AAAGGCAGCTTCAGGATACAAAAGAACAGCTAGAGG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCCAGTTGACGGTTCCTaGCTTCAGCTCTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEPVDGS*LQLCSG
Trigger: TCCTGAGCAGAGCTGAAGCAAGGAACCGTCAACTGG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCAGTTACACAGCTCCTaGTGCATGGACTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEQLHSS*CMDCSW
Trigger: CCAGCTGCAGTCCATGCACAAGGAGCTGTGTAACTG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTCCACTAAGGCTTTGTaGCTCCTGACTTCGTTTTTC +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNSTKAL*LLTSFF
Trigger: GAAAAACGAAGTCAGGAGCAACAAAGCCTTAGTGGA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCCAGCTTTTTCTTCATaGACTGCTTCTCCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERPAFSS*TASPLH
Trigger: GTGAAGAGGAGAAGCAGTCAATGAAGAAAAAGCTGG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGTCCCGGATGAAATCTaGAGTGTCTTTGATGGTAAC +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNVPDEI*SVFDGN
Trigger: GTTACCATCAAAGACACTCAAGATTTCATCCGGGAC...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCGTCCCGGATGAAATCTaGAGTGTCTTTGATGGTAAC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERVPDEI*SVFDGN
Trigger: GTTACCATCAAAGACACTCAAGATTTCATCCGGGAC...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCTTGTGCTCATCAATTaGAAACAAGATGGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVLVLIN*KQDGVQ
Trigger: TTGGACACCATCTTGTTTCAAATTGATGAGCACAAG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGGATGAGCACGACATCTaGTTTCTGACTGAAATACTT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVDEHDI*FLTEIL
Trigger: AAGTATTTCAGTCAGAAACAAGATGTCGTGCTCATC...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACATTTTGTCTGGATCGTaGGCGATTTCCAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNILSGS*AISSSE
Trigger: TTCTGAGCTGGAAATCGCCAACGATCCAGACAAAAT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGAGCTTCCTCCAATTaGTTTTGTCTTTCCACAGAC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCRASSN*FCLSTD
Trigger: GTCTGTGGAAAGACAAAACAAATTGGAGGAAGCTCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCATGAACTCTTTATGTaGCTCAATGAGAGTCCGGAG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERHELFM*LNESPE
Trigger: CTCCGGACTCTCATTGAGCAACATAAAGAGTTCATG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACCATGAACTCTTTATGTaGCTCAATGAGAGTCCGGAG +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNHELFM*LNESPE
Trigger: CTCCGGACTCTCATTGAGCAACATAAAGAGTTCATG...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCGACTGGTAGGAAACTaGGAGGAGAGAATCCCGTCG +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLERLVGN*EERIPS
Trigger: CGACGGGATTCTCTCCTCCAAGTTTCCTACCAGTCG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTGCTTTACAGGGAGTaGACATTTTGCTGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLLYRE*TFCCLP
Trigger: TGGCAAACAGCAAAATGTCAACTCCCTGTAAAGCAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTAAGCTAATGCAGGAGTaGATCAGCGTGGGACCACAA +
Preference number: 5 (lower is better)
Translates to: SRVGGTFARSFGSQSCGAKLMQE*ISVGPQ
Trigger: TTGTGGTCCCACGCTGATCAACTCCTGCATTAGCTT...AGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTGGTTGTGCTCTTCTTTaGGATTTCACACTGGAGCCG +
Preference number: 5 (lower is better)
Translates to: SRVGGTFARSFGSQSCGAGCALL*DFTLEP
Trigger: CGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACC...AGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTAGTTCCGCCCCAGTTTaGGTATCTACCACGGCAATT +
Preference number: 5 (lower is better)
Translates to: SRVGGTFARSFGSQSCGASSAPV*VSTTAI
Trigger: AATTGCCGTGGTAGATACCAAAACTGGGGCGGAACT...AGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp ACATCAGAGGTTCCCTTTGAGTCTGCGGCTTCTACCACGAGGTCCTaGGCAAGCCTTTTTGCCTCGTCTACCTGCTGTTTCAGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: TSEVPFESAASTTRS*ASLFASSTCCFRVC
Trigger: GCAGACCCTGAAACAGCAGGTAGACGAGGCAAAAAGGCTTGCTCAGGACCTCGTGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp GGGTTCCTATGGGCTCCGAGTTTGCCAGCTTCTTTTCTACAGCTGTaGGCCACTCGTTCAGTGGCTCCAGGGTCTCATGAAACTCCTGAG +
Preference number: 5 (lower is better)
Translates to: GFLWAPSLPASFLQL*ATRSVAPGSHETPE
Trigger: CTCAGGAGTTTCATGAGACCCTGGAGCCACTGAACGAGTGGCTCACAGCTGTAGAAAAGAAGCTGGCAAACTCGGAGCCCATAGGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 90 bp TTCTGCTGTTCCAGATCACTGAGGCTCGAGTCTTTCCTCCGCAGATaGTCTTCCAGCGTCTGCCTGGTGAAGGTGTTTTCCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: FCCSRSLRLESFLRR*SSSVCLVKVFSCSW
Trigger: CCAGCTGCAGGAAAACACCTTCACCAGGCAGACGCTGGAAGATCATCTGCGGAGGAAAGACTCGAGCCTCAGTGATCTGGAACAGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp AAGGGTGTCAAAAGCTTCACCAACTCCCTTTCAAGTTTGTCATCCTaGTACGTCACCGGCGGTCTGGAGGGATGCAGGGCTTGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: KGVKSFTNSLSSLSS*YVTGGLEGCRACSL
Trigger: GAGGGAGCAAGCCCTGCATCCCTCCAGACCGCCGGTGACGTATCAGGATGACAAACTTGAAAGGGAGTTGGTGAAGCTTTTGACACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp GATCTACACTCTGTTTCCGGAGGAGAATGTCTTCTTGTAGAGCCCTaGGTTCAGCCCGCTGTCTCCACAGTGCCTCTGGGCTGTGATCCT +
Preference number: 5 (lower is better)
Translates to: DLHSVSGGECLLVEP*VQPAVSTVPLGCDP
Trigger: AGGATCACAGCCCAGAGGCACTGTGGAGACAGCGGGCTGAACTCAGGGCTCTACAAGAAGACATTCTCCTCCGGAAACAGAGTGTAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 90 bp ACCTGCAAGGGTTCGATTTCTTCTTTCTGGAATACCTGTACCAACTaGAAGCCGTTGCAGACGGTGTCCGGCGATCCCACCTGGACCCCT +
Preference number: 5 (lower is better)
Translates to: TCKGSISSFWNTCTN*KPLQTVSGDPTWTP
Trigger: AGGGGTCCAGGTGGGATCGCCGGACACCGTCTGCAACGGCTTTCAGTTGGTACAGGTATTCCAGAAAGAAGAAATCGAACCCTTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS GCA 90 bp GTGCACGATTCCACCCGTCTGAACCTGGTAAGTGAGGATGCTGCTTaGGGTGTCTCTGTCAATCACCCCTTCTGCCACAGCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: VHDSTRLNLVSEDAA*GVSVNHPFCHSFFN
Trigger: GTTGAAGAAGCTGTGGCAGAAGGGGTGATTGACAGAGACACCGCAAGCAGCATCCTCACTTACCAGGTTCAGACGGGTGGAATCGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 90 bp CAGAACCAGCAGCGCGCTGCTGGAAGTTATCAACTCACACTGTACTaGTTCGTCCACAGTCAGTCGCTTAGCAGGGTTCGAGTGCACGAT +
Preference number: 5 (lower is better)
Translates to: QNQQRAAGSYQLTLY*FVHSQSLSRVRVHD
Trigger: ATCGTGCACTCGAACCCTGCTAAGCGACTGACTGTGGACGAAGCAGTACAGTGTGAGTTGATAACTTCCAGCAGCGCGCTGCTGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 90 bp AAACTCCTGAGCTACCACCGAGATCCCTTCCAGTTGACGGTTCCTTaGTTCAGCTCTGCTCAGGAGCGCTTCCCATCTACTGTCCAAGAG +
Preference number: 5 (lower is better)
Translates to: KLLSYHRDPFQLTVP*FSSAQERFPSTVQE
Trigger: CTCTTGGACAGTAGATGGGAAGCGCTCCTGAGCAGAGCTGAAGCAAGGAACCGTCAACTGGAAGGGATCTCGGTGGTAGCTCAGGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp GGTCCAACTTATCCTGTACAGCTCTGGCAGATACGTCTTTTTCAGTaGCCTCGGATCTGGCGATCATCTCCTCTCCCCTCTGCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GPTYPVQLWQIRLFQ*PRIWRSSPLPSASE
Trigger: CTCTGAGGCAGAGGGGAGAGGAGATGATCGCCAGATCCGAGGGCACTGAAAAAGACGTATCTGCCAGAGCTGTACAGGATAAGTTGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp CTGGACCGCGCTGAGTTCATACTTCAGCTCCCTCATCTCTTTCTCTaGCTTCCTATTGGCCAAGGTCAGCTCATCCACCTGCTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: LDRAEFILQLPHLFL*LPIGQGQLIHLLLQ
Trigger: CTGAAGCAGCAGGTGGATGAGCTGACCTTGGCCAATAGGAAGGCAGAGAAAGAGATGAGGGAGCTGAAGTATGAACTCAGCGCGGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp AGGATCATCTTCCTGTGGGTCATCTGCTCTTCGATGGTCTTCAGGTaGAGCTCGTCTTGCACCCTCTTCAGCCTGTCATTCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RIIFLWVICSSMVFR*SSSCTLFSLSFSSC
Trigger: GCAGGAGCTGAATGACAGGCTGAAGAGGGTGCAAGACGAGCTGCACCTGAAGACCATCGAAGAGCAGATGACCCACAGGAAGATGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp CGCTCAAGCTCTCGAATGTTGGTCTCCCACAGCTTCGCGTTCTCTTaGGCCCGGAAGTTTTCTCTCTGGAGAGACACAAAGTCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: RSSSRMLVSHSFAFS*ARKFSLWRDTKSCL
Trigger: CAAGCACGACTTTGTGTCTCTCCAGAGAGAAAACTTCCGGGCGCAAGAGAACGCGAAGCTGTGGGAGACCAACATTCGAGAGCTTGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp AGTCCTCCTCTTCTGAAGTTTGAGAGTTGGTACCCCATCTGCACTTaGTGGCCTTCGCGACAGCATCTGACGCGTCTGAAGGCTCCACAA +
Preference number: 5 (lower is better)
Translates to: SPPLLKFESWYPICT*WPSRQHLTRLKAPQ
Trigger: TTGTGGAGCCTTCAGACGCGTCAGATGCTGTCGCGAAGGCCAGCAAGTGCAGATGGGGTACCAACTCTCAAACTTCAGAAGAGGAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CCA 90 bp TCAAGTTCTGTTGGAAAGCCTGTTGTAAGGTCAGGTGTTCACCTGTaGCTGGAACAAGCAGGGGGCCCGCGGACAGCAGTATCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: SSSVGKPVVRSGVHL*LEQAGGPRTAVSQA
Trigger: TGCTTGAGATACTGCTGTCCGCGGGCCCCCTGCTTGTTCCAGCCACAGGTGAACACCTGACCTTACAACAGGCTTTCCAACAGAACTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp CCGTGTTCTTTCCTGATAGCAGTGTACAACTGGGTAGGGTCAGCTTaGTACTGGGGCTCTCCACCCTCATCTGCTACTCCTTGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PCSFLIAVYNWVGSA*YWGSPPSSATPCPP
Trigger: AGGAGGACAAGGAGTAGCAGATGAGGGTGGAGAGCCCCAGTACCAAGCTGACCCTACCCAGTTGTACACTGCTATCAGGAAAGAACACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp CGTATCTCCCGACAATGTCATCAAGCGTCTTCTGGATGTCATTCTTaGCAGGAAGCAGCGAGCCCTTGGCATCCAAGAGTACCTCTGCGG +
Preference number: 5 (lower is better)
Translates to: RISRQCHQASSGCHS*QEAASPWHPRVPLR
Trigger: CCGCAGAGGTACTCTTGGATGCCAAGGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGAAGACGCTTGATGACATTGTCGGGAGATACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TCAAGCTGCTGGTTGATTGTCTCGGTTTCTGTACCTACGGGGCCCTaGGACTCTTCGTGTTCTTCAGCCTTCTGGAGCAGAGTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: SSCWLIVSVSVPTGP*DSSCSSAFWSRVEN
Trigger: GTTCTCCACTCTGCTCCAGAAGGCTGAAGAACACGAAGAGTCCCAGGGCCCCGTAGGTACAGAAACCGAGACAATCAACCAGCAGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp CGAGTTTGCCAGCTTCTTTTCTACAGCTGTGAGCCACTCGTTCAGTaGCTCCAGGGTCTCATGAAACTCCTGAGCTACCACCGAGATCCC +
Preference number: 5 (lower is better)
Translates to: RVCQLLFYSCEPLVQ*LQGLMKLLSYHRDP
Trigger: GGGATCTCGGTGGTAGCTCAGGAGTTTCATGAGACCCTGGAGCCACTGAACGAGTGGCTCACAGCTGTAGAAAAGAAGCTGGCAAACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 90 bp AGGGACTGTGCACGCTCCAGCTGCAGGTGCCTCTCTGAGTTGATCTaGCAGACGGCATCGTACTTCTTCAGTACCTTGTCCAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: RDCARSSCRCLSELI*QTASYFFSTLSSFF
Trigger: GAAAAAGCTGGACAAGGTACTGAAGAAGTACGATGCCGTCTGCCAGATCAACTCAGAGAGGCACCTGCAGCTGGAGCGTGCACAGTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 90 bp TCGTCCAGGCTGTCCCAGATCAACTTCAGCTCCATCAGCGGGTCCTaGACTGTGTGCTTGTCTGCCTCCTCTGTTACTTTCTTCAGCAAC +
Preference number: 5 (lower is better)
Translates to: SSRLSQINFSSISGS*TVCLSASSVTFFSN
Trigger: GTTGCTGAAGAAAGTAACAGAGGAGGCAGACAAGCACACAGTCCAGGACCCGCTGATGGAGCTGAAGTTGATCTGGGACAGCCTGGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 90 bp TGGTGGCACTCTCTCCCTGCCGTATCAAAAGCCGACGCGAAGGTGTaGTCTTGGGTTGTGCTCTTCTTTTGGATTTCACACTGGAGCCGA +
Preference number: 5 (lower is better)
Translates to: WWHSLPAVSKADAKV*SWVVLFFWISHWSR
Trigger: TCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCGGCTTTTGATACGGCAGGGAGAGAGTGCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp CCTCCTCTTCTGAAGTTTGAGAGTTGGTACCCCATCTGCACTTGCTaGCCTTCGCGACAGCATCTGACGCGTCTGAAGGCTCCACAAAAG +
Preference number: 5 (lower is better)
Translates to: PPLLKFESWYPICTC*PSRQHLTRLKAPQK
Trigger: CTTTTGTGGAGCCTTCAGACGCGTCAGATGCTGTCGCGAAGGCCAGCAAGTGCAGATGGGGTACCAACTCTCAAACTTCAGAAGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGATTTGCAAGGTTGCTTaGAACAGCAACAGTATTCAT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVICKVA*NSNSIH
Trigger: ATGAATACTGTTGCTGTTCAAAGCAACCTTGCAAAT...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTATTTCTCCATCTCCTTaGGTGGGATTTCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCISPSP*VGFLSL
Trigger: AAGAGAAAGAAATCCCACCAAAGGAGATGGAGAAAT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTGTTGCTCAATTCTGTaGGCAAAGTCAACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERCCSIL*AKSTAS
Trigger: AGAAGCAGTTGACTTTGCCAACAGAATTGAGCAACA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAGAACTGCTCCTTCTaGGTTGATATTTCTTTACTG +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCENCSF*VDISLL
Trigger: CAGTAAAGAAATATCAACCAAGAAGGAGCAGTTCTC...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAAAGAGAGCCACCTCTaGGCATTTTTACAATCTTCC +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNKESHL*AFLQSS
Trigger: GGAAGATTGTAAAAATGCCAAGAGGTGGCTCTCTTT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTTCAAGAGTCATGGTaGTTGTCATGGTTGTTGTGT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLQESW*LSWLLC
Trigger: ACACAACAACCATGACAACAACCATGACTCTTGAAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGACACCACTGTTGTTaGCTTTGTGAATTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNRHHCC*LCEFLV
Trigger: CACCAGAAATTCACAAAGCAAACAACAGTGGTGTCT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGACACCACTGTTGTTaGCTTTGTGAATTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRHHCC*LCEFLV
Trigger: CACCAGAAATTCACAAAGCAAACAACAGTGGTGTCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTAGAAATCCTGAGTATTaGTGTCTGTTCCTTCACCAT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCRNPEY*CLFLHH
Trigger: ATGGTGAAGGAACAGACACAAATACTCAGGATTTCT...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGCACTTTGTTTACATTTaGCTTCAGTTCTGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVHFVYI*LQFCLK
Trigger: TTTGAGGCAGAACTGAAGCAAAATGTAAACAAAGTG...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTCTGCTCTTCTTTCTaGGCGTCAAGCCATGCTTGG +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELCSSF*ASSHAW
Trigger: CCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAACTTGGTGATGTCTTaGTACCTGGCTTTAATGGCT +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNNLVMS*YLALMA
Trigger: AGCCATTAAAGCCAGGTACAAAGACATCACCAAGTT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTATAAATGCCTTCCTTaGGGCTCAGTTCCAATAGCT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERYKCLP*GSVPIA
Trigger: AGCTATTGGAACTGAGCCCAAAGGAAGGCATTTATA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGTGCCACATACTTTTCTaGGATATAAATGCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: GRVWLRLKQRHKDTGRCVCHILF*DINAFL
Trigger: AAGGAAGGCATTTATATCCAAGAAAAGTATGTGGCA...CACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCCTGGACTGTGTGCTaGTCTGCCTCCTCTGTTACT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESWTVC*SASSVT
Trigger: AGTAACAGAGGAGGCAGACAAGCACACAGTCCAGGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGAGCACCCTCGAGCTaGTGCTGTCTGCTGACAATT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLERAPSS*CCLLTI
Trigger: AATTGTCAGCAGACAGCACAAGCTCGAGGGTGCTCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTTGTTTTCTTCTCGTaGAGTTTGCTCTTCACGGAT +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFVFFS*SLLFTD
Trigger: ATCCGTGAAGAGCAAACTCAACGAGAAGAAAACAAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTGTCCAGCTTCAGGTaGTCATCTGCCAGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELSSFR*SSAREV
Trigger: AACCTCCCTGGCAGATGACAACCTGAAGCTGGACAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTTTCCTCCAATTTGTTTaGTCTTTCCACAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCFLQFV*SFHRLS
Trigger: GGAAAGTCTGTGGAAAGACAAAACAAATTGGAGGAA...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACAGAGCTTCCTCCAATTaGTTTTGTCTTTCCACAGAC +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNRASSN*FCLSTD
Trigger: GTCTGTGGAAAGACAAAACAAATTGGAGGAAGCTCT...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCAGAGCTTCCTCCAATTaGTTTTGTCTTTCCACAGAC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERRASSN*FCLSTD
Trigger: GTCTGTGGAAAGACAAAACAAATTGGAGGAAGCTCT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGGTTTGTACGCATCTTaGTTTGGATGCAGAGCGGCC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEGLYAS*FGCRAA
Trigger: GGCCGCTCTGCATCCAAACAAAGATGCGTACAAACC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGGGATTTTAGAAGGCTaGGCTGTGGATGGCCGAGAA +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEGILEG*AVDGRE
Trigger: TTCTCGGCCATCCACAGCCAAGCCTTCTAAAATCCC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTATCTCTTCGAAGACTaGTCTAATTTGCTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERYLFED*SNLLAG
Trigger: ACCTGCCAGCAAATTAGACAAGTCTTCGAAGAGATA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CCATCTCCAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTTAAGGAAATCTCCCTaGAGTCCACCAGATGTTCTG +
Preference number: 5 (lower is better)
Translates to: PSPASRVGGTFARSFGSQLRKSP*SPPDVL
Trigger: CAGAACATCTGGTGGACTCAAGGGAGATTTCCTTAA...CTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTGGAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp GGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTAGAGCCTGCTTGTTGTaGGGATTAGGAAAGACTCTC +
Preference number: 5 (lower is better)
Translates to: GSGALLHVPLDPSPVVLCRACLL*GLGKTL
Trigger: GAGAGTCTTTCCTAATCCCAACAACAAGCAGGCTCT...ACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp CCATCTCCAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTACAGAGCCTGCTTGTaGTTGGGATTAGGAAAGACT +
Preference number: 5 (lower is better)
Translates to: PSPASRVGGTFARSFGSQYRACL*LGLGKT
Trigger: AGTCTTTCCTAATCCCAACAACAAGCAGGCTCTGTA...CTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTGGAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp TTTCGGGCGAGGATGAGTTTGTCTTCGCAGCTGACACTATCCCTCTaGACTCGGGTGGCAATCTGCTGCAGCATATCCAACCTCTCAACC +
Preference number: 5 (lower is better)
Translates to: FRARMSLSSQLTLSL*TRVAICCSISNLST
Trigger: GGTTGAGAGGTTGGATATGCTGCAGCAGATTGCCACCCGAGTTCAGAGGGATAGTGTCAGCTGCGAAGACAAACTCATCCTCGCCCGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000187486.7
CDS TCA 90 bp AGCTCCTCCTTTTCCATGGACTCCTGGACAAGGTCTTCCAGTTTGTaGATGCTGCTGGACCTGTCACAGCTGTACTTGCGCTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: SSSFSMDSWTRSSSL*MLLDLSQLYLRWMA
Trigger: TGCCATCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGGAAAAGGAGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000187486.7
CDS TCA 90 bp TTCCCGATTCCTTCTAAGTCCCGGAGCCTGTTGTCGATCTGGACGTaGACGCTCTGCCACCTTTCGACAAGCTGGTCTGCCTTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: FPIPSKSRSLLSIWT*TLCHLSTSWSAFSL
Trigger: CAAAGAAAAGGCAGACCAGCTTGTCGAAAGGTGGCAGAGCGTTCACGTCCAGATCGACAACAGGCTCCGGGACTTAGAAGGAATCGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 90 bp CTGGGATGTTCGCTGAGCCACCTTCTTATTGAGAGTCTTCCACCTTaGGTTGACACTGTCCAGGTCATGCTCCAGACCCTGAGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: LGCSLSHLLIESLPP*VDTVQVMLQTLSAG
Trigger: ACCTGCACTCAGGGTCTGGAGCATGACCTGGACAGTGTCAACTCAAGGTGGAAGACTCTCAATAAGAAGGTGGCTCAGCGAACATCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 90 bp TTTCGGGCGAGGATGAGTTTGTCTTCGCAGCTGACACTATCCCTCTaGACTCGGGTGGCAATCTGCTGCAGCATATCCAACCTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: FRARMSLSSQLTLSL*TRVAICCSISNLCP
Trigger: TGGACACAGGTTGGATATGCTGCAGCAGATTGCCACCCGAGTTCAGAGGGATAGTGTCAGCTGCGAAGACAAACTCATCCTCGCCCGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
CDS TCA 90 bp CTTCAGCTTTGTCTGTTGTTTGGTTCAGCTGCCTGCCAAGGTCTCTaGGCTGCTGGGAATAGCGTTCCTGGGCCTGATCCTTCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: LQLCLLFGSAACQGL*AAGNSVPGPDPSFP
Trigger: TGGAAAGGAAGGATCAGGCCCAGGAACGCTATTCCCAGCAGCTCAGAGACCTTGGCAGGCAGCTGAACCAAACAACAGACAAAGCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp TCCTCCTTTTCCTCCATGGACTCCTGGACAAGGTCTTCCAGTTTGTaGATGCTGCTGGACCTGTCACAGCTGTACTTGCGCTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: SSFSSMDSWTRSSSL*MLLDLSQLYLRWMA
Trigger: TGCCATCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGGAGGAAAAGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000185897.7
CDS GCA 90 bp CTTTCCACACTTCCCATCCAGTCCAGCATCTCATCCAAAGCGTCCTaGACACTCAGGGAGCGGGTCAGAGTGATCTGGAGCTTTTCATTC +
Preference number: 5 (lower is better)
Translates to: LSTLPIQSSISSKAS*TLRERVRVIWSFSF
Trigger: GAATGAAAAGCTCCAGATCACTCTGACCCGCTCCCTGAGTGTGCAGGACGCTTTGGATGAGATGCTGGACTGGATGGGAAGTGTGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp ACCTGTTGGCTCAGTTCGCTGTGCTCTTCAGCTAACGTCTCCGCTTaGAACAACACATCAGAGGTTCCCTTTGAGTCTGCGGCTTCTACC +
Preference number: 5 (lower is better)
Translates to: TCWLSSLCSSANVSA*NNTSEVPFESAAST
Trigger: GGTAGAAGCCGCAGACTCAAAGGGAACCTCTGATGTGTTGTTGCAAGCGGAGACGTTAGCTGAAGAGCACAGCGAACTGAGCCAACAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TCTGCCAGCTGGGGCTCAACTCGATACAGCCAATCAATGAGGGCCTaGAGGGCATCTGTGAACTGTCCAGAAAATAACAGAGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SASWGSTRYSQSMRA*RASVNCPENNRASS
Trigger: GGAGGAAGCTCTGTTATTTTCTGGACAGTTCACAGATGCCCTGCAGGCCCTCATTGATTGGCTGTATCGAGTTGAGCCCCAGCTGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TTATCCGACTCTTCCTGGAGCAGGATCATCTTCCTGTGGGTCATCTaGTCTTCGATGGTCTTCAGGTGCAGCTCGTCTTGCACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LSDSSWSRIIFLWVI*SSMVFRCSSSCTLF
Trigger: GAAGAGGGTGCAAGACGAGCTGCACCTGAAGACCATCGAAGAGCAGATGACCCACAGGAAGATGATCCTGCTCCAGGAAGAGTCGGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp TCCCTGCCGTATCAAAAGCCGACGCGAAGGTGTGGTCTTGGGTTGTaGTCTTCTTTTGGATTTCACACTGGAGCCGAAGCAACTGGTGCT +
Preference number: 5 (lower is better)
Translates to: SLPYQKPTRRCGLGL*SSFGFHTGAEATGA
Trigger: AGCACCAGTTGCTTCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCGGCTTTTGATACGGCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp CTGAGCTCTGATCGGAGAGCGGGGACAGACGGCGAGTCAGCCGCTTaGCTGAAAAACTCTTCACACTTATTTGTGATCGTTCCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: LSSDRRAGTDGESAA*LKNSSHLFVIVPKS
Trigger: TGACTTGGGAACGATCACAAATAAGTGTGAAGAGTTTTTCAGCCAAGCGGCTGACTCGCCGTCTGTCCCCGCTCTCCGATCAGAGCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 90 bp TTTGTATGGAGCCTACCCCATCGGTATCAGACTGGCTTTCTCGGCTaGTGTCACACTCTTCTCTGTCCCCTCTCCAATGACCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: FVWSLPHRYQTGFLG*CHTLLCPLSNDHQV
Trigger: CACCTGATGGTCATTGGAGAGGGGACAGAGAAGAGTGTGACACCAGCCGAGAAAGCCAGTCTGATACCGATGGGGTAGGCTCCATACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp TCATCCAGCTCAGTCAGGGTACCCGAGAGACTTCTCAGCAGGCTCTaGTACTGTGTGCTTTTGACGATAGCCTGGTCAATCCAGTCGCAT +
Preference number: 5 (lower is better)
Translates to: SSSSVRVPERLLSRL*YCVLLTIAWSIQSH
Trigger: ATGCGACTGGATTGACCAGGCTATCGTCAAAAGCACACAGTACCAGAGCCTGCTGAGAAGTCTCTCGGGTACCCTGACTGAGCTGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp CAAAGTGGTGGTCCATTTCCTTCTGCAGGGACTTTAACTCGGCGATaGAACTCTCTGATTCAGTGGGATCCAGGGAGAACGTCACGCCGT +
Preference number: 5 (lower is better)
Translates to: QSGGPFPSAGTLTRR*NSLIQWDPGRTSRR
Trigger: ACGGCGTGACGTTCTCCCTGGATCCCACTGAATCAGAGAGTTCCATCGCCGAGTTAAAGTCCCTGCAGAAGGAAATGGACCACCACTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp GGTGCAGACTTCCATATGTGCGTTAAGCTGCTCCTTGGCTGTCTCTaGGAGACCTCCCAGAGGTTTAGATGCCAAGAGATGACGCTCTGT +
Preference number: 5 (lower is better)
Translates to: GADFHMCVKLLLGCL*ETSQRFRCQEMTLC
Trigger: ACAGAGCGTCATCTCTTGGCATCTAAACCTCTGGGAGGTCTCCCAGAGACAGCCAAGGAGCAGCTTAACGCACATATGGAAGTCTGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 90 bp GCGCTCAGTTCTGCGCTCAGGCTCCTCACCTCCTTCTCCGTTTTCTaGATGATCATGCTCTGCTGGTCACACTTTTGCTTGAACTCGCTT +
Preference number: 5 (lower is better)
Translates to: ALSSALRLLTSFSVF*MIMLCWSHFCLNSL
Trigger: AAGCGAGTTCAAGCAAAAGTGTGACCAGCAGAGCATGATCATCCAGAAAACGGAGAAGGAGGTGAGGAGCCTGAGCGCAGAACTGAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp GTCTCCCACAGCTTCGCGTTCTCTTGCGCCCGGAAGTTTTCTCTCTaGAGAGACACAAAGTCGTGCTTGATGCCTGAGAGATCGGTTTCA +
Preference number: 5 (lower is better)
Translates to: VSHSFAFSCARKFSL*RDTKSCLMPERSVS
Trigger: TGAAACCGATCTCTCAGGCATCAAGCACGACTTTGTGTCTCTCCAGAGAGAAAACTTCCGGGCGCAAGAGAACGCGAAGCTGTGGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp CACTCTCTCCCTGCCGTATCAAAAGCCGACGCGAAGGTGTGGTCTTaGGTTGTGCTCTTCTTTTGGATTTCACACTGGAGCCGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: HSLPAVSKADAKVWS*VVLFFWISHWSRSN
Trigger: GTTGCTTCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCGGCTTTTGATACGGCAGGGAGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp CCTAACAGAGCACGCCTGGTTAAGGTCAAGGCTCGGGGAAGCCTCTaGCTCTACGCTTTTCTTAAGGAAATCTCCCTTGAGTCCACCAGA +
Preference number: 5 (lower is better)
Translates to: PNRARLVKVKARGSL*LYAFLKEISLESTR
Trigger: TCTGGTGGACTCAAGGGAGATTTCCTTAAGAAAAGCGTAGAGCCAGAGGCTTCCCCGAGCCTTGACCTTAACCAGGCGTGCTCTGTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp GCTAGGCCTTCTGGTGGAAGCACCTTGAACAGAGTGATAGAATTCTaGCTGCACCCGGCTGTTTTTCTTGATCCTTCGCTTCCTCCCCGA +
Preference number: 5 (lower is better)
Translates to: ARPSGGSTLNRVIEF*LHPAVFLDPSLPPR
Trigger: TCGGGGAGGAAGCGAAGGATCAAGAAAAACAGCCGGGTGCAGCCAGAATTCTATCACTCTGTTCAAGGTGCTTCCACCAGAAGGCCTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCATTTCTCCATCTCCTTaGGTGGGATTTCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERISPSP*VGFLSL
Trigger: AAGAGAAAGAAATCCCACCAAAGGAGATGGAGAAAT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTACACTCTGATACTGTaGCTCAATTCTGTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNYTLIL*LNSVGK
Trigger: TTTGCCAACAGAATTGAGCAACAGTATCAGAGTGTA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGGGCGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTCTCCCATTCAGAATTTaGGAGGCTAATTCATTTGTA +
Preference number: 5 (lower is better)
Translates to: RARLAAPEAEAQGHWEVCLPFRI*EANSFV
Trigger: TACAAATGAATTAGCCTCCAAAATTCTGAATGGGAG...ACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCCAGCAGGTTACCATaGACTTCATCCTCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESSRLP*TSSSSP
Trigger: TGGCGAAGAGGATGAAGTCAATGGTAACCTGCTGGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCTGCCTCAAATGACTaGTTCTGCTCCACCTGCAAC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESASND*FCSTCN
Trigger: GTTGCAGGTGGAGCAGAACAAGTCATTTGAGGCAGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTCTTCCAGCTTTTGTaGCCTGTCCATGGTCAACTG +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELFQLL*PVHGQL
Trigger: CAGTTGACCATGGACAGGCAACAAAAGCTGGAAGAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTGTTGGCGCTGTCGTaGCTCGCCATGAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLLALS*LAMRAS
Trigger: GGAAGCCCTCATGGCGAGCAACGACAGCGCCAACAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTATGGGCTCCGAGTTaGCCAGCTTCTTTTCTACAG +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELWAPS*PASFLQ
Trigger: CTGTAGAAAAGAAGCTGGCAAACTCGGAGCCCATAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTGTCTCTCTTGCACTaGACTGGCAGCTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELSLLH*TGSFSF
Trigger: AAAGGAGAAGCTGCCAGTCAAGTGCAAGAGAGACAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGTCCGTCAGCCACTGTaGCAAATCTTCGATTTCACC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEVRQPL*QIFDFT
Trigger: GGTGAAATCGAAGATTTGCAACAGTGGCTGACGGAC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTTGTTTTCTTCTCGTaGAGTTTGCTCTTCACGGAT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFVFFS*SLLFTD
Trigger: ATCCGTGAAGAGCAAACTCAACGAGAAGAAAACAAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCCTTGTGCTCATCAATTaGAAACAAGATGGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERLVLIN*KQDGVQ
Trigger: TTGGACACCATCTTGTTTCAAATTGATGAGCACAAG...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCCAGCAGCTCCTGCTaGGCGATGAGCCCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSSSSC*AMSPAS
Trigger: GCTGGCTGGGCTCATCGCCAAGCAGGAGCTGCTGGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCCAGCAGCTCCTGCTaGGCGATGAGCCCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSSSSC*AMSPAS
Trigger: GCTGGCTGGGCTCATCGCCAAGCAGGAGCTGCTGGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGCGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACTTGACATTTTGCTGTTaGCCAACCATGGTTTACCAT +
Preference number: 5 (lower is better)
Translates to: RVWLRLKQRHKDTGRCVNLTFCC*PTMVYH
Trigger: ATGGTAAACCATGGTTGGCAAACAGCAAAATGTCAA...GTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATTCAAGCTCTCGAATGTaGGTCTCCCACAGCTTCGCG +
Preference number: 5 (lower is better)
Translates to: QRFELVTQFLGCTFSRHHSSSRM*VSHSFA
Trigger: CGCGAAGCTGTGGGAGACCAACATTCGAGAGCTTGA...ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp GGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTAGGTGTGGTCTTGGGTaGTGCTCTTCTTTTGGATTT +
Preference number: 5 (lower is better)
Translates to: GSGALLHVPLDPSPVVLCRCGLG*CSSFGF
Trigger: AAATCCAAAAGAAGAGCACAACCCAAGACCACACCT...ACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp GGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTTCTGCAGTTCAGTGCTaGTCTGAGAAAAATACTCCG +
Preference number: 5 (lower is better)
Translates to: GSGALLHVPLDPSPVVLCSAVQC*SEKNTP
Trigger: CGGAGTATTTTTCTCAGACAAGCACTGAACTGCAGA...ACAGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp AATGGTGATGTACCTCAAGTCGCCTTTGTGAGAAATGACGTCCTCTaGGAAGCTCTTCTGCCTCGTCAGCTTGTCCATGAGCCCGCTGAG +
Preference number: 5 (lower is better)
Translates to: NGDVPQVAFVRNDVL*EALLPRQLVHEPAE
Trigger: CTCAGCGGGCTCATGGACAAGCTGACGAGGCAGAAGAGCTTCTCAGAGGACGTCATTTCTCACAAAGGCGACTTGAGGTACATCACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp GCATCTCATCCAAAGCGTCCTGCACACTCAGGGAGCGGGTCAGAGTaGTCTGGAGCTTTTCATTCCGTTCGTTCACACACTTGGACAGAT +
Preference number: 5 (lower is better)
Translates to: ASHPKRPAHSGSGSE*SGAFHSVRSHTWTD
Trigger: ATCTGTCCAAGTGTGTGAACGAACGGAATGAAAAGCTCCAGATCACTCTGACCCGCTCCCTGAGTGTGCAGGACGCTTTGGATGAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp AGCAAGCCTTTTTGCCTCGTCTACCTGCTGTTTCAGGGTCTGCAGTaGCTTCTGTTGAGCCTGCAGCACGGACAGGTGCTTGTTACTGTA +
Preference number: 5 (lower is better)
Translates to: SKPFCLVYLLFQGLQ*LLLSLQHGQVLVTV
Trigger: TACAGTAACAAGCACCTGTCCGTGCTGCAGGCTCAACAGAAGTCACTGCAGACCCTGAAACAGCAGGTAGACGAGGCAAAAAGGCTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp CCAGCATCATCTTGCAGGTTCTGTTGGCGCTGTCGTTGCTCGCCATaGGGGCTTCCAGTTTCTTCAAAAAGGTCTGCATGCACGCCTTTT +
Preference number: 5 (lower is better)
Translates to: PASSCRFCWRCRCSP*GLPVSSKRSACTPF
Trigger: AAAAGGCGTGCATGCAGACCTTTTTGAAGAAACTGGAAGCCCTCATGGCGAGCAACGACAGCGCCAACAGAACCTGCAAGATGATGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp AGACAGAGGACACACCAGAAGAGAGGGAATGGCACCTCCTTTTTGTaGGCTGAAGACGGTGTACTCCGAAAGGGTGACCTCTCTCATCAC +
Preference number: 5 (lower is better)
Translates to: RQRTHQKRGNGTSFL*AEDGVLRKGDLSHH
Trigger: GTGATGAGAGAGGTCACCCTTTCGGAGTACACCGTCTTCAGCTCACAAAAAGGAGGTGCCATTCCCTCTCTTCTGGTGTGTCCTCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS GCA 90 bp CCTCCTTTTCCATGGACTCCTGGACAAGGTCTTCCAGTTTGTGAATaGTGCTGGACCTGTCACAGCTGTACTTGCGCTGGATGGCATCTT +
Preference number: 5 (lower is better)
Translates to: PPFPWTPGQGLPVCE*CWTCHSCTCAGWHL
Trigger: AAGATGCCATCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGGAAAAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000187486.7
CDS GCA 90 bp AGCATGCTTTCATGTAAATCATCTCTTTCCAGGGGAGTCCGGATCTaGCGAATCAACCTGTCTTCACAGCTCTCCAGGCGGAGCCGAATG +
Preference number: 5 (lower is better)
Translates to: SMLSCKSSLSRGVRI*RINLSSQLSRRSRM
Trigger: CATTCGGCTCCGCCTGGAGAGCTGTGAAGACAGGTTGATTCGGCAGATCCGGACTCCCCTGGAAAGAGATGATTTACATGAAAGCATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 90 bp GTCGATCTGGACGTGAACGCTCTGCCACCTTTCGACAAGCTGGTCTaGCTTTTCTTTGTGCCAGTCAAAGTCAAGGTCCCGTTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: VDLDVNALPPFDKLV*LFFVPVKVKVPFFV
Trigger: CACAAAGAACGGGACCTTGACTTTGACTGGCACAAAGAAAAGGCAGACCAGCTTGTCGAAAGGTGGCAGAGCGTTCACGTCCAGATCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 90 bp AGTTGTCCTGTTAGGTTGTCCCACTTCTGGGTCACAGCTTCCAGTTaGTCGTTCACAATCCCATGTAAAGAAGGGTCTTCCCCAGGCCTG +
Preference number: 5 (lower is better)
Translates to: SCPVRLSHFWVTASS*SFTIPCKEGSSPGL
Trigger: CAGGCCTGGGGAAGACCCTTCTTTACATGGGATTGTGAACGAGCAACTGGAAGCTGTGACCCAGAAGTGGGACAACCTAACAGGACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp GACTCCAAGACATCCAGCTTTGCGGAAATCGGGGGAGAGTCCCTCTaGTCTTCTTTCTTGGCGTCAAGCCATGCTTGGAAATCCTTAGAC +
Preference number: 5 (lower is better)
Translates to: DSKTSSFAEIGGESL*SSFLASSHAWKSLD
Trigger: GTCTAAGGATTTCCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGAGGGACTCTCCCCCGATTTCCGCAAAGCTGGATGTCTTGGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TTCCGGAGGAGAATGTCTTCTTGTAGAGCCTTGTGCTGTGAAATCTaGTCCTCCAGCTTTGGTGCCTGGGTTCCTATGGGCTCCGAGTTT +
Preference number: 5 (lower is better)
Translates to: FRRRMSSCRALCCEI*SSSFGAWVPMGSEF
Trigger: AAACTCGGAGCCCATAGGAACCCAGGCACCAAAGCTGGAGGAGCAGATTTCACAGCACAAGGCTCTACAAGAAGACATTCTCCTCCGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS GCA 90 bp CGGTCTCCAGGTCTGTTCCAATGGGAGACATTGTGGCTAACTTGTTaGCTGCGATGTCAACCCAGTCGAATATTCCCTGCAATCCGTCCT +
Preference number: 5 (lower is better)
Translates to: RSPGLFQWETLWLTC*LRCQPSRIFPAIRP
Trigger: AGGACGGATTGCAGGGAATATTCGACTGGGTTGACATCGCAGGCAACAAGTTAGCCACAATGTCTCCCATTGGAACAGACCTGGAGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp TTCTCTTGCGCCCGGAAGTTTTCTCTCTGGAGAGACACAAAGTCGTaGTTGATGCCTGAGAGATCGGTTTCAGTGACGACCTTGGACTCC +
Preference number: 5 (lower is better)
Translates to: FSCARKFSLWRDTKS*LMPERSVSVTTLDS
Trigger: GGAGTCCAAGGTCGTCACTGAAACCGATCTCTCAGGCATCAAGCACGACTTTGTGTCTCTCCAGAGAGAAAACTTCCGGGCGCAAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp TTGTTGTTGGGATTAGGAAAGACTCTCGTGTTGCTGGACGGTTCATaGAGGAACTGTAGGACGGCGTTGTTCAGCAAGCCCTGCTGCACA +
Preference number: 5 (lower is better)
Translates to: LLLGLGKTLVLLDGS*RNCRTALFSKPCCT
Trigger: TGTGCAGCAGGGCTTGCTGAACAACGCCGTCCTACAGTTCCTGCATGAACCGTCCAGCAACACGAGAGTCTTTCCTAATCCCAACAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp TTTCAGCAAGGAGATTCGCTCCCCACTAGCGGTCAGCCAATAGCCTaGAATGGGACTGTGCAAATCCTTCTTGGGAACTACCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: FQQGDSLPTSGQPIA*NGTVQILLGNYLAQ
Trigger: CTGAGCAAGGTAGTTCCCAAGAAGGATTTGCACAGTCCCATTGCAGGCTATTGGCTGACCGCTAGTGGGGAGCGAATCTCCTTGCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp CCTTTTCCTCCATGGACTCCTGGACAAGGTCTTCCAGTTTGTGAATaGTGCTGGACCTGTCACAGCTGTACTTGCGCTGGATGGCATCTT +
Preference number: 5 (lower is better)
Translates to: PFPPWTPGQGLPVCE*CWTCHSCTCAGWHL
Trigger: AAGATGCCATCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGGAGGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000185897.7
CDS GCA 90 bp TCTCAAAGTTTTCTCCTGGTCTTCAGAGCTGGAAATCCACTTGTGTaGCCCGTCTCTGGGCACAACCAATGCCGTGCTCTTCGTACTCTC +
Preference number: 5 (lower is better)
Translates to: SQSFLLVFRAGNPLV*PVSGHNQCRALRTL
Trigger: GAGAGTACGAAGAGCACGGCATTGGTTGTGCCCAGAGACGGGGCACACAAGTGGATTTCCAGCTCTGAAGACCAGGAGAAAACTTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CCA 90 bp TCTGCTGGCCGGCCAGCAGTGACGTCTCATAGTCACCAGCATCAATaGCTCCTTTATGTGACAGTGGGCCACAATCTGATGTGTTGTCAT +
Preference number: 5 (lower is better)
Translates to: SAGRPAVTSHSHQHQ*LLYVTVGHNLMCCH
Trigger: ATGACAACACATCAGATTGTGGCCCACTGTCACATAAAGGAGCCATTGATGCTGGTGACTATGAGACGTCACTGCTGGCCGGCCAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp CAAGCGTCTTCTGGATGTCATTCTTGGCAGGAAGCAGCGAGCCCTTaGCATCCAAGAGTACCTCTGCGGTTTTCTTCAGCTTCTCTACAG +
Preference number: 5 (lower is better)
Translates to: QASSGCHSWQEAASP*HPRVPLRFSSASLQ
Trigger: CTGTAGAGAAGCTGAAGAAAACCGCAGAGGTACTCTTGGATGCCAAGGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGAAGACGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TCATCCAAAGCGTCCTGCACACTCAGGGAGCGGGTCAGAGTGATCTaGAGCTTTTCATTCCGTTCGTTCACACACTTGGACAGATCATCG +
Preference number: 5 (lower is better)
Translates to: SSKASCTLRERVRVI*SFSFRSFTHLDRSS
Trigger: CGATGATCTGTCCAAGTGTGTGAACGAACGGAATGAAAAGCTCCAGATCACTCTGACCCGCTCCCTGAGTGTGCAGGACGCTTTGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp CCCTGGAGCTTGGTTTCTAAGAAAGAACACTTCTCGTCCACCTGTTaGCTCAGTTCGCTGTGCTCTTCAGCTAACGTCTCCGCTTGCAAC +
Preference number: 5 (lower is better)
Translates to: PWSLVSKKEHFSSTC*LSSLCSSANVSACN
Trigger: GTTGCAAGCGGAGACGTTAGCTGAAGAGCACAGCGAACTGAGCCAACAGGTGGACGAGAAGTGTTCTTTCTTAGAAACCAAGCTCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TGTAGAGCCTTGTGCTGTGAAATCTGCTCCTCCAGCTTTGGTGCCTaGGTTCCTATGGGCTCCGAGTTTGCCAGCTTCTTTTCTACAGCT +
Preference number: 5 (lower is better)
Translates to: CRALCCEICSSSFGA*VPMGSEFASFFSTA
Trigger: AGCTGTAGAAAAGAAGCTGGCAAACTCGGAGCCCATAGGAACCCAGGCACCAAAGCTGGAGGAGCAGATTTCACAGCACAAGGCTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS CCA 90 bp TTATCGATCAGGTTCATCACCAAGTCAATGTCCCCGTGGACAGGCTaGTCTTCTGCCAGCTGGGGCTCAACTCGATACAGCCAATCAATG +
Preference number: 5 (lower is better)
Translates to: LSIRFITKSMSPWTG*SSASWGSTRYSQSM
Trigger: CATTGATTGGCTGTATCGAGTTGAGCCCCAGCTGGCAGAAGACCAGCCTGTCCACGGGGACATTGACTTGGTGATGAACCTGATCGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp CGTTTGAACTTATCCGACTCTTCCTGGAGCAGGATCATCTTCCTGTaGGTCATCTGCTCTTCGATGGTCTTCAGGTGCAGCTCGTCTTGC +
Preference number: 5 (lower is better)
Translates to: RLNLSDSSWSRIIFL*VICSSMVFRCSSSC
Trigger: GCAAGACGAGCTGCACCTGAAGACCATCGAAGAGCAGATGACCCACAGGAAGATGATCCTGCTCCAGGAAGAGTCGGATAAGTTCAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp CAGGGTAAGGTGTCTCCAGGAGCCGGAGATGCTGAGCCAGATTTCTaGCTGAAATCATCCTCGTCAGAAAAATCCGCAGAGGAGGACATA +
Preference number: 5 (lower is better)
Translates to: QGKVSPGAGDAEPDF*LKSSSSEKSAEEDI
Trigger: TATGTCCTCCTCTGCGGATTTTTCTGACGAGGATGATTTCAGCCAGAAATCTGGCTCAGCATCTCCGGCTCCTGGAGACACCTTACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
ENSMUST00000183034.5
ENSMUST00000187486.7
CDS CCA 90 bp CCTCCATGGACTCCTGGACAAGGTCTTCCAGTTTGTGAATGCTGCTaGACCTGTCACAGCTGTACTTGCGCTGGATGGCATCTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: PPWTPGQGLPVCECC*TCHSCTCAGWHLSD
Trigger: ATCTGAAAGATGCCATCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185897.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCATTTGCAAGGTTGCTTaGAACAGCAACAGTATTCAT +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERICKVA*NSNSIH
Trigger: ATGAATACTGTTGCTGTTCAAAGCAACCTTGCAAAT...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGATCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCTGTCACAGCTGTACTaGCGCTGGATGGCATCTTTC +
Preference number: 5 (lower is better)
Translates to: GSLLWPPSCFRSMTNKQTLSQLY*RWMASF
Trigger: GAAAGATGCCATCCAGCGCAAGTACAGCTGTGACAG...GGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTCGATGAGAGTTGTTaGCCAAGACACACTCATCGT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELDESC*PRHTHR
Trigger: ACGATGAGTGTGTCTTGGCAAACAACTCTCATCGAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CGTCTGGCTGCGCCTGAAGCAGAGGCACAAGGACACTGGGAGGTGTGTGAACGCTTCTCAATGTTATTCTaGTCTGCTATAACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RLAAPEAEAQGHWEVCERFSMLF*SAITAS
Trigger: GGAAGCAGTTATAGCAGACAAGAATAACATTGAGAA...GCGTTCACACACCTCCCAGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCACTGTCACTGTCTGTaGCCGTGTCGCTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDHCHCL*PCRSAG
Trigger: GCCAGCAGAGCGACACGGCAACAGACAGTGACAGTG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCAAACTGCTCTACTTaGGCCTTTAGCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESNCST*AFSSTI
Trigger: GATGGTGGAGCTAAAGGCCAAAGTAGAGCAGTTTGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTGTTGGCGCTGTCGTaGCTCGCCATGAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLLALS*LAMRAS
Trigger: GGAAGCCCTCATGGCGAGCAACGACAGCGCCAACAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCTTCTTGTAGAGCCTaGTGCTGTGAAATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESSCRA*CCEICS
Trigger: GGAGCAGATTTCACAGCACAAGGCTCTACAAGAAGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTCGTCAATGCTCTTCTaGACAATGGGTTTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESSMLF*TMGLSG
Trigger: GCCTGACAAACCCATTGTCAAGAAGAGCATTGACGA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGGTGGGTTCCAGTCTaGTCCAACTCTATTATCTGC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLERWVPV*SNSIIC
Trigger: GCAGATAATAGAGTTGGACAAGACTGGAACCCACCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGATGTCGAAATCGAAGTaGGCAAATTCCCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEMSKSK*ANSLSS
Trigger: GGAGCTGAGGGAATTTGCCAACTTCGATTTCGACAT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGGATTGGTGTGCCCTaGGGTGTGCTGGCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTWIGVP*GVLAAA
Trigger: TGCTGCCGCCAGCACACCCAAGGGCACACCAATCCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
CDS-3UTR CAA 90 bp GGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTTCTTCTCTGCCTTCCTATaGGCCAAGGTCAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: GKAFMISLGSLLWPPSCFFSAFL*AKVSSS
Trigger: GGATGAGCTGACCTTGGCCAATAGGAAGGCAGAGAA...GAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp ACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGTCCTGTGGTGCTCTGTGTGCTTTATTTTCTaGAGATCGTTTGCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: TGRGHFCTFLWIPVLWCSVCFIF*RSFASC
Trigger: GCAGGAAGCAAACGATCTCAAGAAAATAAAGCACAC...AGAGCACCACAGGACTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp ACAATTCCGATTCCTGGGCTGGAGAGAGATGGCTCAATGGCTATGAGCAGGCTGCAGCACCGAGCCCCCTaGAATCTTTCTTTTGGATCT +
Preference number: 5 (lower is better)
Translates to: TIPIPGLERDGSMAMSRLQHRAP*NLSFGS
Trigger: AGATCCAAAAGAAAGATTCAAGGGGGCTCGGTGCTG...CAGCCTGCTCATAGCCATTGAGCCATCTCTCTCCAGCCCAGGAATCGGAATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS TCA 90 bp TTAAAACTGCCTGAAAGACAGACAGGACCTCTCCAGTGGTCTGATTaGTGGTGCCTGCAATCACTTTATCCGGCTTCTCCGGGACCTTCG +
Preference number: 5 (lower is better)
Translates to: LKLPERQTGPLQWSD*WCLQSLYPASPGPS
Trigger: CGAAGGTCCCGGAGAAGCCGGATAAAGTGATTGCAGGCACCATCAATCAGACCACTGGAGAGGTCCTGTCTGTCTTTCAGGCAGTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 90 bp GCCCCTAACAGCCTAAACATGGTTTCTCGGTCTATGAGTCCCTCGTaGGCTGCTCTCAGGATGCTAACGCTTCTTCCACACTTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: APNSLNMVSRSMSPS*AALRMLTLLPHFSV
Trigger: AACACTGAAGTGTGGAAGAAGCGTTAGCATCCTGAGAGCAGCTCACGAGGGACTCATAGACCGAGAAACCATGTTTAGGCTGTTAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 90 bp TCTTCTCCTCCTTCCTCTGGGCTGCTCATCAACACCCCTTCTTTCTaGAAGCCCATTTCCCGAATGGACGTCTCATCTACCAGCTTATCG +
Preference number: 5 (lower is better)
Translates to: SSPPSSGLLINTPSF*KPISRMDVSSTSLS
Trigger: CGATAAGCTGGTAGATGAGACGTCCATTCGGGAAATGGGCTTTCAGAAAGAAGGGGTGTTGATGAGCAGCCCAGAGGAAGGAGGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 90 bp GTCTTTGCAGAAGCTTCTGTTCCTGTATCTGGGCCTTCACTACTTTaGACTCAGCGGACGGAGGCTTTTGATTGGCCACAAGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: VFAEASVPVSGPSLL*TQRTEAFDWPQAPL
Trigger: CAGAGGAGCTTGTGGCCAATCAAAAGCCTCCGTCCGCTGAGTTCAAAGTAGTGAAGGCCCAGATACAGGAACAGAAGCTTCTGCAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 90 bp TCACCTGTGGTCTGTTTGAGCAGCTCTAAGCCGTTCAGCAGTGCCTaGTCTACACTCTGTTTCCGGAGGAGAATGTCTTCTTGTAGAGCC +
Preference number: 5 (lower is better)
Translates to: SPVVCLSSSKPFSSA*STLCFRRRMSSCRA
Trigger: GGCTCTACAAGAAGACATTCTCCTCCGGAAACAGAGTGTAGATCAGGCACTGCTGAACGGCTTAGAGCTGCTCAAACAGACCACAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 90 bp TTGGCTGTCTCTGGGAGACCTCCCAGAGGTTTAGATGCCAAGAGATaGCGCTCTGTGTCCGTCAGCCACTGTTGCAAATCTTCGATTTCA +
Preference number: 5 (lower is better)
Translates to: LAVSGRPPRGLDAKR*RSVSVSHCCKSSIS
Trigger: TGAAATCGAAGATTTGCAACAGTGGCTGACGGACACAGAGCGTCATCTCTTGGCATCTAAACCTCTGGGAGGTCTCCCAGAGACAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp CCTTTTCCATGGACTCCTGGACAAGGTCTTCCAGTTTGTGAATGCTaGTGGACCTGTCACAGCTGTACTTGCGCTGGATGGCATCTTTCA +
Preference number: 5 (lower is better)
Translates to: PFPWTPGQGLPVCEC*WTCHSCTCAGWHLS
Trigger: TGAAAGATGCCATCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000187486.7
CDS GCA 90 bp TTCGCTTCACCTTCAAGAGTCATGGTTGTTGTCATGGTTGTTGTGTaGGGAGCCCCTCTGTGGCTAAGTTCCTCGGTGTGTGTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: FASPSRVMVVVMVVV*GAPLWLSSSVCVSR
Trigger: TCTACTGACACACACCGAGGAACTTAGCCACAGAGGGGCTCCGCACACAACAACCATGACAACAACCATGACTCTTGAAGGTGAAGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 90 bp GTCCCTAAGTTCACTCAGCATGTTGTCCAGCTTCAGGTTGTCATCTaGCAGGGAGGTTTTCTCCTTCAGAGAACGTCCAGTTCGGTTGGT +
Preference number: 5 (lower is better)
Translates to: VPKFTQHVVQLQVVI*QGGFLLQRTSSSVG
Trigger: ACCAACCGAACTGGACGTTCTCTGAAGGAGAAAACCTCCCTGGCAGATGACAACCTGAAGCTGGACAACATGCTGAGTGAACTTAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TCCAGTGACATGGATGTCAGATATCTGGCATCCATCATCCCTAGGTaGATCCTTGGAGACAGAGGACACACCAGAAGAGAGGGAATGGCA +
Preference number: 5 (lower is better)
Translates to: SSDMDVRYLASIIPR*ILGDRGHTRREGMA
Trigger: TGCCATTCCCTCTCTTCTGGTGTGTCCTCTGTCTCCAAGGATGCACCTAGGGATGATGGATGCCAGATATCTGACATCCATGTCACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS GCA 90 bp TTTCCTCCATGGACTCCTGGACAAGGTCTTCCAGTTTGTGAATGCTaGTGGACCTGTCACAGCTGTACTTGCGCTGGATGGCATCTTTCA +
Preference number: 5 (lower is better)
Translates to: FPPWTPGQGLPVCEC*WTCHSCTCAGWHLS
Trigger: TGAAAGATGCCATCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185897.7
CDS CCA 90 bp TTATTGGAGGACTCTTCCAGCTTTTGTTGCCTGTCCATGGTCAACTaGTTGAGCTCTTGCCACTTAGTGTCCATCTCTGCCAGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: LLEDSSSFCCLSMVN*LSSCHLVSISASAC
Trigger: GCAGGCACTGGCAGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTTGACCATGGACAGGCAACAAAAGCTGGAAGAGTCCTCCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp AGACTTCTCAGCAGGCTCTGGTACTGTGTGCTTTTGACGATAGCCTaGTCAATCCAGTCGCATCTGTCCCTCAGTTGTCCTGTTAGGTTG +
Preference number: 5 (lower is better)
Translates to: RLLSRLWYCVLLTIA*SIQSHLSLSCPVRL
Trigger: CAACCTAACAGGACAACTGAGGGACAGATGCGACTGGATTGACCAGGCTATCGTCAAAAGCACACAGTACCAGAGCCTGCTGAGAAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TTGCTCTTCACGGATTCCCACTTCTCTTTCAGGTTGGTGATGTCTTaGTCAATGTTGGTCTCCGCAGATCGGGGACACCTTGCAAGCATC +
Preference number: 5 (lower is better)
Translates to: LLFTDSHFSFRLVMS*SMLVSADRGHLASI
Trigger: GATGCTTGCAAGGTGTCCCCGATCTGCGGAGACCAACATTGACCAAGACATCACCAACCTGAAAGAGAAGTGGGAATCCGTGAAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TATCTCTTCGAAGACTTGTCTAATTTGCTGGCAGGTGACCTCCTCTaGGGTGTGGGGATTTTAGAAGGCTTGGCTGTGGATGGCCGAGAA +
Preference number: 5 (lower is better)
Translates to: YLFEDLSNLLAGDLL*GVGILEGLAVDGRE
Trigger: TTCTCGGCCATCCACAGCCAAGCCTTCTAAAATCCCCACACCCCAGAGGAGGTCACCTGCCAGCAAATTAGACAAGTCTTCGAAGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TTCCGAAACTCATCTGCCGAGCGTTTGAACTTATCCGACTCTTCCTaGAGCAGGATCATCTTCCTGTGGGTCATCTGCTCTTCGATGGTC +
Preference number: 5 (lower is better)
Translates to: FRNSSAERLNLSDSS*SRIIFLWVICSSMV
Trigger: GACCATCGAAGAGCAGATGACCCACAGGAAGATGATCCTGCTCCAGGAAGAGTCGGATAAGTTCAAACGCTCGGCAGATGAGTTTCGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp TCTAAGACCTTGTGCTGTGAAATCTGCTCCTCCAGCTTTGGTGCCTaGGTTCCTATGGGCTCCGAGTTTGCCAGCTTCTTTTCTACAGCT +
Preference number: 5 (lower is better)
Translates to: SKTLCCEICSSSFGA*VPMGSEFASFFSTA
Trigger: AGCTGTAGAAAAGAAGCTGGCAAACTCGGAGCCCATAGGAACCCAGGCACCAAAGCTGGAGGAGCAGATTTCACAGCACAAGGTCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTACCAGCTTATCGCTTaGGCCATCTCTACCTTTAAC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEYQLIA*AISTFN
Trigger: GTTAAAGGTAGAGATGGCCAAAGCGATAAGCTGGTA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAAATGTTTGCTGGCTTaGGCCTCGCAGGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDKCLLA*ASQAWS
Trigger: GCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGGCTCCCGTAAATGTTaGCTGGCTTTGGCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDGSRKC*LALASQ
Trigger: CTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTCTTCCTGAGCCTTTaGCAATTTGGAGAGCTTAGT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELFLSL*QFGELS
Trigger: ACTAAGCTCTCCAAATTGCAAAAGGCTCAGGAAGAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCCTCTAGCTGTTCTTTaGTATCCTGAAGCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEPLAVL*YPEAAF
Trigger: AAAGGCAGCTTCAGGATACAAAAGAACAGCTAGAGG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTGCCGGTGCTCCTCTaGCTGTCTCCTCAGAGTCTC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLPVLL*LSPQSL
Trigger: GAGACTCTGAGGAGACAGCAAGAGGAGCACCGGCAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGGTCCCGGATGAAATCTaGAGTGTCTTTGATGGTAAC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEVPDEI*SVFDGN
Trigger: GTTACCATCAAAGACACTCAAGATTTCATCCGGGAC...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGCTTCATGGAACTGCTaGGCCCTCTTCCTGGCTTCG +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDASWNC*ALFLAS
Trigger: CGAAGCCAGGAAGAGGGCCAAGCAGTTCCATGAAGC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCATGAACTCTTTATGTaGCTCAATGAGAGTCCGGAG +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEHELFM*LNESPE
Trigger: CTCCGGACTCTCATTGAGCAACATAAAGAGTTCATG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCCAGCAGCTCCTGCTaGGCGATGAGCCCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSSSSC*AMSPAS
Trigger: GCTGGCTGGGCTCATCGCCAAGCAGGAGCTGCTGGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTGTCCAGGGCGTCGTaGAGCTTCCTCCTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLSRAS*SFLLLS
Trigger: GGAAAGGAGGAGGAAGCTCAACGACGCCCTGGACAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTGTCCAGGGCGTCGTaGAGCTTCCTCCTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLSRAS*SFLLLS
Trigger: GGAAAGGAGGAGGAAGCTCAACGACGCCCTGGACAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTGCTTTACAGGGAGTaGACATTTTGCTGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELLYRE*TFCCLP
Trigger: TGGCAAACAGCAAAATGTCAACTCCCTGTAAAGCAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GTGGTGCTCTGTGAGGTGCTCTTTCAGGATGTACAATGGATGACATCATTAATGCTCATGTCCAGGAGCTaGGCTTCGACCAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: VVLCEVLFQDVQWMTSLMLMSRS*ASTSCL
Trigger: CAGGCAGCTGGTCGAAGCCAAGCTCCTGGACATGAG...CATTAATGATGTCATCCATTGTACATCCTGAAAGAGCACCTCACAGAGCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp CCATCTCCAGCCTCACGGGTCGGGGGCACTTTTGCACGTTCCTTTGGATCCCAGACAGCTTCACTAATATaGAACTGCAGACCAGTTTTA +
Preference number: 5 (lower is better)
Translates to: PSPASRVGGTFARSFGSQTASLI*NCRPVL
Trigger: TAAAACTGGTCTGCAGTTCAATATTAGTGAAGCTGT...CTGGGATCCAAAGGAACGTGCAAAAGTGCCCCCGACCCGTGAGGCTGGAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp GTAGGTTTGGGGACACGCACTCTAGATGGACTTTCTGAGCCTTTCTaGACAACTGTTGTATCTGCTAGGTTTTCTGGCCGCGGCAACTCA +
Preference number: 5 (lower is better)
Translates to: VGLGTRTLDGLSEPF*TTVVSARFSGRGNS
Trigger: TGAGTTGCCGCGGCCAGAAAACCTAGCAGATACAACAGTTGTTCAGAAAGGCTCAGAAAGTCCATCTAGAGTGCGTGTCCCCAAACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 90 bp GTATTACTCCACCTGATTTGGCTGCGGCTATGGCCTTTGCAGGGCTaGTCAATGCACTCAGCAGGTTACATAGTGAGACACCACTGTTGT +
Preference number: 5 (lower is better)
Translates to: VLLHLIWLRLWPLQG*SMHSAGYIVRHHCC
Trigger: ACAACAGTGGTGTCTCACTATGTAACCTGCTGAGTGCATTGATCAGCCCTGCAAAGGCCATAGCCGCAGCCAAATCAGGTGGAGTAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp CTTTGGAGCTGCTCAGTGACCCTGTTTACCTTTTCCATCAATGACTaGTTCTCCTCCGTGACCGCTTCTTTATCTACCTCGCAGACGCTG +
Preference number: 5 (lower is better)
Translates to: LWSCSVTLFTFSIND*FSSVTASLSTSQTL
Trigger: CAGCGTCTGCGAGGTAGATAAAGAAGCGGTCACGGAGGAGAATCAGTCATTGATGGAAAAGGTAAACAGGGTCACTGAGCAGCTCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp GTTTGGCTTCCCGTTCTTCGACCAGCGTGTGGATGCTTCCCCAGATaGAAACCATTTGGTCCAACTTATCCTGTACAGCTCTGGCAGATA +
Preference number: 5 (lower is better)
Translates to: VWLPVLRPACGCFPR*KPFGPTYPVQLWQI
Trigger: TATCTGCCAGAGCTGTACAGGATAAGTTGGACCAAATGGTTTTCATCTGGGGAAGCATCCACACGCTGGTCGAAGAACGGGAAGCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 90 bp CTCCGAGTGATTTCTGAAACTCCTTGTGCTGGACCAGCTGGGCTTTaGTTTTGTCTGGATCGTTGGCGATTTCCAGCTCAGAATCCAGAG +
Preference number: 5 (lower is better)
Translates to: LRVISETPCAGPAGL*FCLDRWRFPAQNPE
Trigger: CTCTGGATTCTGAGCTGGAAATCGCCAACGATCCAGACAAAATCAAAGCCCAGCTGGTCCAGCACAAGGAGTTTCAGAAATCACTCGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp CTTCGCAGGATCCGAACCAGTCGCAGCTGCTGGGAGTCTCCAAACTaGTTTCCCAGGAAGAACCTGTATTTGTTATCACCGATCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LRRIRTSRSCWESPN*FPRKNLYLLSPICS
Trigger: TGAACAGATCGGTGATAACAAATACAGGTTCTTCCTGGGAAATCAGTTTGGAGACTCCCAGCAGCTGCGACTGGTTCGGATCCTGCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp CCATTAGCTTCTCCATCTTCTTCCGAAACTCATCTGCCGAGCGTTTaGACTTATCCGACTCTTCCTGGAGCAGGATCATCTTCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: PLASPSSSETHLPSV*TYPTLPGAGSSSCG
Trigger: CCCACAGGAAGATGATCCTGCTCCAGGAAGAGTCGGATAAGTTCAAACGCTCGGCAGATGAGTTTCGGAAGAAGATGGAGAAGCTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp GTAAGTGAGGATGCTGCTTGCGGTGTCTCTGTCAATCACCCCTTCTaGCACAGCTTCTTCAACAGTCATTTTCTGACCGGAGTTGCAATC +
Preference number: 5 (lower is better)
Translates to: VSEDAACGVSVNHPF*HSFFNSHFLTGVAI
Trigger: GATTGCAACTCCGGTCAGAAAATGACTGTTGAAGAAGCTGTGGCAGAAGGGGTGATTGACAGAGACACCGCAAGCAGCATCCTCACTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 90 bp ACATTTTGCTTCAGTTCTGCCTCAAATGACTTGTTCTGCTCCACCTaGAACTTCACAGACTCAGTGTCTGCAGGTGTAGGTGTCTGGCGC +
Preference number: 5 (lower is better)
Translates to: TFCFSSASNDLFCST*NFTDSVSAGVGVWR
Trigger: GCGCCAGACACCTACACCTGCAGACACTGAGTCTGTGAAGTTGCAGGTGGAGCAGAACAAGTCATTTGAGGCAGAACTGAAGCAAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TCTACACTCTGTTTCCGGAGGAGAATGTCTTCTTGTAGAGCCTTGTaGTGTGAAATCTGCTCCTCCAGCTTTGGTGCCTGGGTTCCTATG +
Preference number: 5 (lower is better)
Translates to: STLCFRRRMSSCRAL*CEICSSSFGAWVPM
Trigger: CATAGGAACCCAGGCACCAAAGCTGGAGGAGCAGATTTCACAGCACAAGGCTCTACAAGAAGACATTCTCCTCCGGAAACAGAGTGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS GCA 90 bp AATAGCTGTGGCCCAGTCTTGTTCATCTTATCTATGTGTGGCTTGTaGTCGGCTATCAGTTCTCGAAGTTGCCGGTGCTCCTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: NSCGPVLFILSMCGL*SAISSRSCRCSSCC
Trigger: ACAGCAAGAGGAGCACCGGCAACTTCGAGAACTGATAGCCGAGCACAAGCCACACATAGATAAGATGAACAAGACTGGGCCACAGCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp CAGTTGATGAAGTCCTGGAGGGAGTTGTGGAAGTTCATGGCCAAGTaGAGGGCCTCCTCCAACTTTGTTTTCTTCTCGTTGAGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: QLMKSWRELWKFMAK*RASSNFVFFSLSLL
Trigger: GAGCAAACTCAACGAGAAGAAAACAAAGTTGGAGGAGGCCCTGCACTTGGCCATGAACTTCCACAACTCCCTCCAGGACTTCATCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TTCATAGTAGTCAATGTACCCATCACCATCTCTGTCAAAGATGTCTaGCACGGCGCTCATCTCCAGGCGACTGGTAGGAAACTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: FIVVNVPITISVKDV*HGAHLQATGRKLGG
Trigger: TCCTCCAAGTTTCCTACCAGTCGCCTGGAGATGAGCGCCGTGGCAGACATCTTTGACAGAGATGGTGATGGGTACATTGACTACTATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CCA 90 bp AAGCCAGAAGTCACGCTAGAAGACGTCAAGGAAGGGGTTAAACTCTaGGTTAGCCCTGAGTTCAGGCTGGGGTGTAAGGTTTGTGCAAAT +
Preference number: 5 (lower is better)
Translates to: KPEVTLEDVKEGVKL*VSPEFRLGCKVCAN
Trigger: ATTTGCACAAACCTTACACCCCAGCCTGAACTCAGGGCTAACCCAGAGTTTAACCCCTTCCTTGACGTCTTCTAGCGTGACTTCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 90 bp TTTCCATGGACTCCTGGACAAGGTCTTCCAGTTTGTGAATGCTGCTaGACCTGTCACAGCTGTACTTGCGCTGGATGGCATCTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: FPWTPGQGLPVCECC*TCHSCTCAGWHLSD
Trigger: ATCTGAAAGATGCCATCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000187486.7
CDS CCA 90 bp CCAGTCTCTTTCTCTGGTCCTCCAGTGAGGGAGTCTTCTTTCACTTaGCTCTTCATCTCAGAGGCTGTTACAGCTGAAGTCAAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: PVSFSGPPVRESSFT*LFISEAVTAEVKSA
Trigger: TGCTGACTTGACTTCAGCTGTAACAGCCTCTGAGATGAAGAGCCAAGTGAAAGAAGACTCCCTCACTGGAGGACCAGAGAAAGAGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp CTAACTTGCTATCACCTTCATGCAAATAGGTTCCGTTCTGCTCCATaGGTTGTGTGTGCTTCGTCCACACCCCTTCGGAGTCTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: LTCYHLHANRFRSAP*VVCASSTPLRSLPQ
Trigger: TTGAGGAAGACTCCGAAGGGGTGTGGACGAAGCACACACAACCCATGGAGCAGAACGGAACCTATTTGCATGAAGGTGATAGCAAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp CAGTCGCATCTGTCCCTCAGTTGTCCTGTTAGGTTGTCCCACTTCTaGGTCACAGCTTCCAGTTGCTCGTTCACAATCCCATGTAAAGAA +
Preference number: 5 (lower is better)
Translates to: QSHLSLSCPVRLSHF*VTASSCSFTIPCKE
Trigger: TTCTTTACATGGGATTGTGAACGAGCAACTGGAAGCTGTGACCCAGAAGTGGGACAACCTAACAGGACAACTGAGGGACAGATGCGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp ACATCTCTCGGATGGTATTCTGGAAGTGGCCGAGACCCTGGAGCTTaGTTTCTAAGAAAGAACACTTCTCGTCCACCTGTTGGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: TSLGWYSGSGRDPGA*FLRKNTSRPPVGSV
Trigger: AACTGAGCCAACAGGTGGACGAGAAGTGTTCTTTCTTAGAAACCAAGCTCCAGGGTCTCGGCCACTTCCAGAATACCATCCGAGAGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TCCATCACATCCAGCAGTTTGGCTTCCCGTTCTTCGACCAGCGTGTaGATGCTTCCCCAGATGAAAACCATTTGGTCCAACTTATCCTGT +
Preference number: 5 (lower is better)
Translates to: SITSSSLASRSSTSV*MLPQMKTIWSNLSC
Trigger: ACAGGATAAGTTGGACCAAATGGTTTTCATCTGGGGAAGCATCCACACGCTGGTCGAAGAACGGGAAGCCAAACTGCTGGATGTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 90 bp AAGGTCTGGTGTTCTGCAATGAGGGTTTTCACCTCTTCGATCTCCTaGGGGATAACTTCCTTATCTTTCTCGGTCAGTGTGGTTTCCGCC +
Preference number: 5 (lower is better)
Translates to: KVWCSAMRVFTSSIS*GITSLSFSVSVVSA
Trigger: GGCGGAAACCACACTGACCGAGAAAGATAAGGAAGTTATCCCCCAGGAGATCGAAGAGGTGAAAACCCTCATTGCAGAACACCAGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TCAAAAGCCGACGCGAAGGTGTGGTCTTGGGTTGTGCTCTTCTTTTaGATTTCACACTGGAGCCGAAGCAACTGGTGCTCATGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: SKADAKVWSWVVLFF*ISHWSRSNWCSCSF
Trigger: AAAGGAACATGAGCACCAGTTGCTTCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCGGCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp CCTCAGAGCGAAAGTGATGAGATCTCAGAGCAGCATCTCTGCTTCTaGAACGACCCGAAAAGACCGATTTCATCGGATGTCTCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: PQSESDEISEQHLCF*NDPKRPISSDVSLS
Trigger: AGAAAGGGAGACATCCGATGAAATCGGTCTTTTCGGGTCGTTCCAGAAGCAGAGATGCTGCTCTGAGATCTCATCACTTTCGCTCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS-3UTR CAA 90 bp GGATCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCCCGACTCTAATCTTTaGGAATCAGACTGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: GSLLWPPSCFRSMTNKQTPDSNL*ESDWRA
Trigger: TGCTCTCCAGTCTGATTCCAAAAGATTAGAGTCGGG...GGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTGTTGCTCAATTCTGTaGGCAAAGTCAACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLECCSIL*AKSTAS
Trigger: AGAAGCAGTTGACTTTGCCAACAGAATTGAGCAACA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGGCTTCTCCTACAGCTaGTGGGTTCAGGGGACAGTG +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTGFSYS*WVQGTV
Trigger: CACTGTCCCCTGAACCCACAAGCTGTAGGAGAAGCC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTGGACATTCACAGTTaGAATGGCCTTCACAGATCT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELDIHS*NGLHRS
Trigger: AGATCTGTGAAGGCCATTCAAACTGTGAATGTCCAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGGCTCCCGTAAATGTTaGCTGGCTTTGGCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVGSRKC*LALASQ
Trigger: CTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACCGGGTGTCGAACTCTaGCAGCAGAATCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVPGVEL*QQNLDL
Trigger: CAGGTCCAGATTCTGCTGCAAGAGTTCGACACCCGG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCCAAGACATCCAGCTTaGCGGAAATCGGGGGAGAGT +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDPRHPA*RKSGES
Trigger: ACTCTCCCCCGATTTCCGCAAAGCTGGATGTCTTGG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCCGCAGAGTCTCCACTaGCTCTCTGTACTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTPQSLH*LSVLEG
Trigger: GCCCTCAAGTACAGAGAGCAAGTGGAGACTCTGCGG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAACTTGGTGATGTCTTaGTACCTGGCTTTAATGGCT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLENLVMS*YLALMA
Trigger: AGCCATTAAAGCCAGGTACAAAGACATCACCAAGTT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGCTCCACCTCCACCTaGTCCAGCCAGTTACACAGC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSSTST*SSQLHS
Trigger: GCTGTGTAACTGGCTGGACAAGGTGGAGGTGGAGCT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGTACTGAACGGCAGCTaGCATGGCCTCTTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDVLNGS*HGLFQS
Trigger: AGACTGGAAGAGGCCATGCAAGCTGCCGTTCAGTAC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCCTGGGTAAGCCAGTaGATGAAGTCCTGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVAWVSQ*MKSWRE
Trigger: CTCCCTCCAGGACTTCATCAACTGGCTTACCCAGGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGAGCTTCCTCCAATTaGTTTTGTCTTTCCACAGAC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLERASSN*FCLSTD
Trigger: GTCTGTGGAAAGACAAAACAAATTGGAGGAAGCTCT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCCAGCAGCTCCTGCTaGGCGATGAGCCCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSSSSC*AMSPAS
Trigger: GCTGGCTGGGCTCATCGCCAAGCAGGAGCTGCTGGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACAGACCTGCTGCCACTaGCTCACCAGCAGGTTAACC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVQTCCH*LTSRLT
Trigger: GGTTAACCTGCTGGTGAGCAAGTGGCAGCAGGTCTG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCAGACCTGCTGCCACTaGCTCACCAGCAGGTTAACC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTQTCCH*LTSRLT
Trigger: GGTTAACCTGCTGGTGAGCAAGTGGCAGCAGGTCTG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGCGGAAGTGGATCTGTaGGGGGAAGCTCCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVAEVDL*GEAPLD
Trigger: ATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCGC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTATCTCTTCGAAGACTaGTCTAATTTGCTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEYLFED*SNLLAG
Trigger: ACCTGCCAGCAAATTAGACAAGTCTTCGAAGAGATA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCCCGCAGCTCCATGTaGGTCCTTCCTTTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSRSSM*VLPLAL
Trigger: CAGGGCTAAAGGAAGGACCAACATGGAGCTGCGGGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAAAGGATGGAGAATCTaGGGTGTGCTGGCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDKGWRI*GVLAAA
Trigger: TGCTGCCGCCAGCACACCCAAGATTCTCCATCCTTT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCAACTTCAGCTTTGTCTGTaGTTTGGTTCAGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: SLLWPPSCFRSMTNKQTQLQLCL*FGSAAC
Trigger: GCAGGCAGCTGAACCAAACAACAGACAAAGCTGAAG...TTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp GTTGTCTGCTTTGGCTGGGAGACAGATCTTGTGCATAATCAGAGATaGAGGACTGTACGTCAAAGGCCGTCGTTTCCAGCTGCATTTTGG +
Preference number: 5 (lower is better)
Translates to: VVCFGWETDLVHNQR*RTVRQRPSFPAAFW
Trigger: CCAAAATGCAGCTGGAAACGACGGCCTTTGACGTACAGTCCTTCATCTCTGATTATGCACAAGATCTGTCTCCCAGCCAAAGCAGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS TCA 90 bp TACCTCTGCGGTTTTCTTCAGCTTCTCTACAGCAACCTGCTGACTTaGTATCTGTCCTTGCAAAGCCTTGGTCTCTTCCAGCTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: YLCGFLQLLYSNLLT*YLSLQSLGLFQLPL
Trigger: CAAAGGCAGCTGGAAGAGACCAAGGCTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCTGTAGAGAAGCTGAAGAAAACCGCAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp AAGAGTACCTCTGCGGTTTTCTTCAGCTTCTCTACAGCAACCTGCTaGCTTGATATCTGTCCTTGCAAAGCCTTGGTCTCTTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KSTSAVFFSFSTATC*LDICPCKALVSSSC
Trigger: GCAGCTGGAAGAGACCAAGGCTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCTGTAGAGAAGCTGAAGAAAACCGCAGAGGTACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp TCTTTCCTGTGTTCTAAGAATTTAGCAGTTGATTCCTGCATATGCTaGGACAGCTCCGGAACATCCTTTCCTGGCATGGCCACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: SFLCSKNLAVDSCIC*DSSGTSFPGMATSV
Trigger: CACCGAGGTGGCCATGCCAGGAAAGGATGTTCCGGAGCTGTCTCAGCATATGCAGGAATCAACTGCTAAATTCTTAGAACACAGGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp CTGATCTTCCCGGTAAGTTTGCTATTCTCAACCATGGTTGCTCTCTaGCGCTGCAGTAGATCTGAATACGCCCCGTGCTCAGAATTCTCT +
Preference number: 5 (lower is better)
Translates to: LIFPVSLLFSTMVAL*RCSRSEYAPCSEFS
Trigger: AGAGAATTCTGAGCACGGGGCGTATTCAGATCTACTGCAGCGTCAGAGAGCAACCATGGTTGAGAATAGCAAACTTACCGGGAAGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp AGTTTAAACACTGAATGTTCCTCTCGGCTAGTGCGTGCGCCCTGGTaGCTCTGTCAACTTCCCTCTGGAGTTTTCCTTTCTCTTGATGGA +
Preference number: 5 (lower is better)
Translates to: SLNTECSSRLVRAPW*LCQLPSGVFLSLDG
Trigger: TCCATCAAGAGAAAGGAAAACTCCAGAGGGAAGTTGACAGAGTCACCAGGGCGCACGCACTAGCCGAGAGGAACATTCAGTGTTTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp CCTGCAATGGAGGTAGCTTTGGTCAGAAACTTGCTAAGACTTCTCTaGACTTCTTCGACAGTCTTCAGACCAAGCCGCAGCTGCTCAACT +
Preference number: 5 (lower is better)
Translates to: PAMEVALVRNLLRLL*TSSTVFRPSRSCST
Trigger: AGTTGAGCAGCTGCGGCTTGGTCTGAAGACTGTCGAAGAAGTTCAGAGAAGTCTTAGCAAGTTTCTGACCAAAGCTACCTCCATTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp GGTCTTCCAGTTTGTGAATGCTGCTGGACCTGTCACAGCTGTACTTaGGCTGGATGGCATCTTTCAGATTCCTTAGGTAATCAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: GLPVCECCWTCHSCT*AGWHLSDSLGNQWL
Trigger: AAGCCACTGATTACCTAAGGAATCTGAAAGATGCCATCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 90 bp CGGCAGCCGAGTACTGCTCTGAGTATTTCTGACACTCGTCCATTTTaGTCTGCTTCACCTCTATTTCAGACACCAGCATCTTCTGTTGGT +
Preference number: 5 (lower is better)
Translates to: RQPSTALSISDTRPF*SASPLFQTPASSVG
Trigger: ACCAACAGAAGATGCTGGTGTCTGAAATAGAGGTGAAGCAGAGCAAAATGGACGAGTGTCAGAAATACTCAGAGCAGTACTCGGCTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 90 bp TTTAAGTTCAGCTGCGCACACTTCATCTTCACCTCGTTCAGTTTCTaGTCAATCAAAGCTCTATCCGCTTGGGACAACTCGTCACCGCTC +
Preference number: 5 (lower is better)
Translates to: FKFSCAHFIFTSFSF*SIKALSAWDNSSPL
Trigger: GAGCGGTGACGAGTTGTCCCAAGCGGATAGAGCTTTGATTGAGCAGAAACTGAACGAGGTGAAGATGAAGTGTGCGCAGCTGAACTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TCTAAGAAAGAACACTTCTCGTCCACCTGTTGGCTCAGTTCGCTGTaGTCTTCAGCTAACGTCTCCGCTTGCAACAACACATCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: SKKEHFSSTCWLSSL*SSANVSACNNTSEV
Trigger: AACCTCTGATGTGTTGTTGCAAGCGGAGACGTTAGCTGAAGAGCACAGCGAACTGAGCCAACAGGTGGACGAGAAGTGTTCTTTCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp CTGCCAGCGCTGATTGAGAATTCTGAGCTTGTACTGGAGGTTGCTTaGTTCTTCGCCTTCACTCGACTCGATGAGATCATTTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LPALIENSELVLEVA*FFAFTRLDEIISCF
Trigger: AAAGCAGGAAATGATCTCATCGAGTCGAGTGAAGGCGAAGAAGCAAGCAACCTCCAGTACAAGCTCAGAATTCTCAATCAGCGCTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp ATCTGTTCAACTTGGAATCGCTTGGCACACTTACACTTGGCTACCTaGCTTGTGACCTCGTCCTCAATTTTGTCAGCATCCGTGATGGGT +
Preference number: 5 (lower is better)
Translates to: ICSTWNRLAHLHLAT*LVTSSSILSASVMG
Trigger: ACCCATCACGGATGCTGACAAAATTGAGGACGAGGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTGAACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS GCA 90 bp ACAGTGCCTCTGGGCTGTGATCCTGGACTGACAGCTTGCTCAGTTTaGCATGTACTTCATTCAGCCAGTTCATCAGCTCAACTTCATCTT +
Preference number: 5 (lower is better)
Translates to: TVPLGCDPGLTACSV*HVLHSASSSAQLHL
Trigger: AAGATGAAGTTGAGCTGATGAACTGGCTGAATGAAGTACATGGCAAACTGAGCAAGCTGTCAGTCCAGGATCACAGCCCAGAGGCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 90 bp TACTTCTGTAACTCCACCGTGCCGTCTCCAATCACAAAGGCTTCCTaGTTACTAATTAGGCGGTTTTCAGTCTGGGTGAGGAGATCACAC +
Preference number: 5 (lower is better)
Translates to: YFCNSTVPSPITKAS*LLIRRFSVWVRRSH
Trigger: GTGTGATCTCCTCACCCAGACTGAAAACCGCCTAATTAGTAACCAGGAAGCCTTTGTGATTGGAGACGGCACGGTGGAGTTACAGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TTCTCCATGAGCCACTGTTTTAACTGGGCCTCTGTGGTCTGGAACTaGGTTAGATTATTGGAGGACTCTTCCAGCTTTTGTTGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: FSMSHCFNWASVVWN*VRLLEDSSSFCCLS
Trigger: GGACAGGCAACAAAAGCTGGAAGAGTCCTCCAATAATCTAACCCAGTTCCAGACCACAGAGGCCCAGTTAAAACAGTGGCTCATGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp AGGCTATTGGCTGTGTTGTTCAGTAGTTCCAGCATACCAAAGTGGTaGTCCATTTCCTTCTGCAGGGACTTTAACTCGGCGATGGAACTC +
Preference number: 5 (lower is better)
Translates to: RLLAVLFSSSSIPKW*SISFCRDFNSAMEL
Trigger: GAGTTCCATCGCCGAGTTAAAGTCCCTGCAGAAGGAAATGGACCACCACTTTGGTATGCTGGAACTACTGAACAACACAGCCAATAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp AGCAGGCTATTGGCTGTGTTGTTCAGTAGTTCCAGCATACCAAAGTaGTGGTCCATTTCCTTCTGCAGGGACTTTAACTCGGCGATGGAA +
Preference number: 5 (lower is better)
Translates to: SRLLAVLFSSSSIPK*WSISFCRDFNSAME
Trigger: TTCCATCGCCGAGTTAAAGTCCCTGCAGAAGGAAATGGACCACCACTTTGGTATGCTGGAACTACTGAACAACACAGCCAATAGCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp CTGCCAGGGAGGTTTTCTCCTTCAGAGAACGTCCAGTTCGGTTGGTaGTATCGTAGACAGAATGTTTGCCTCCGAGTGATTTCTGAAACT +
Preference number: 5 (lower is better)
Translates to: LPGRFSPSENVQFGW*YRRQNVCLRVISET
Trigger: AGTTTCAGAAATCACTCGGAGGCAAACATTCTGTCTACGATACCACCAACCGAACTGGACGTTCTCTGAAGGAGAAAACCTCCCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp CATCTGCCAGGGAGGTTTTCTCCTTCAGAGAACGTCCAGTTCGGTTaGTGGTATCGTAGACAGAATGTTTGCCTCCGAGTGATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: HLPGRFSPSENVQFG*WYRRQNVCLRVISE
Trigger: TTCAGAAATCACTCGGAGGCAAACATTCTGTCTACGATACCACCAACCGAACTGGACGTTCTCTGAAGGAGAAAACCTCCCTGGCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAAGCATGCTCTAAATTaGCAAGGTTGCTTTGAACAG +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEKHALN*QGCFEQ
Trigger: CTGTTCAAAGCAACCTTGCAAATTTAGAGCATGCTT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCACTGTCACTGTCTGTaGCCGTGTCGCTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLHCHCL*PCRSAG
Trigger: GCCAGCAGAGCGACACGGCAACAGACAGTGACAGTG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTCATCTGCTACTCCTaGTCCTCCTCGCCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLICYS*SSSPVS
Trigger: GGAGACGGGCGAGGAGGACAAGGAGTAGCAGATGAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGAGTCTTCCTCAACATTaGACAGCCAGTTCAAAAGAT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLESLPQH*TASSKD
Trigger: ATCTTTTGAACTGGCTGTCAAATGTTGAGGAAGACT...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTCTTGCTGCAAGACTaGGCAGCGTCTATCACCCTG +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLLLQD*AASITL
Trigger: CAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGAACTTCTCTGTGGGTaGCGGAAGTCTCGACGCTGT +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVELLCG*RKSRRC
Trigger: ACAGCGTCGAGACTTCCGCAACCCACAGAGAAGTTC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGGTCACAGCTTCCAGTaGCTCGTTCACAATCCCATG +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDGHSFQ*LVHNPM
Trigger: CATGGGATTGTGAACGAGCAACTGGAAGCTGTGACC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACCAAGACATCCAGCTTaGCGGAAATCGGGGGAGAGT +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVPRHPA*RKSGES
Trigger: ACTCTCCCCCGATTTCCGCAAAGCTGGATGTCTTGG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTGCATGCACGCCTTTaGCTTTCTCAGGGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLHARL*LSQGFC
Trigger: GCAGAAACCCTGAGAAAGCAAAAGGCGTGCATGCAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTGTTGGCGCTGTCGTaGCTCGCCATGAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLLALS*LAMRAS
Trigger: GGAAGCCCTCATGGCGAGCAACGACAGCGCCAACAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCCAGTTGACGGTTCCTaGCTTCAGCTCTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTPVDGS*LQLCSG
Trigger: TCCTGAGCAGAGCTGAAGCAAGGAACCGTCAACTGG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCACCTGTGGTCTGTTaGAGCAGCTCTAAGCCGTTC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSPVVC*SSSKPF
Trigger: GAACGGCTTAGAGCTGCTCAAACAGACCACAGGTGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATCACATCCAGCAGTTaGGCTTCCCGTTCTTCGACC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDITSSS*ASRSST
Trigger: GGTCGAAGAACGGGAAGCCAAACTGCTGGATGTGAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTACTGAACGGCAGCTaGCATGGCCTCTTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVLNGS*HGLFQS
Trigger: AGACTGGAAGAGGCCATGCAAGCTGCCGTTCAGTAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCTTGTGCTCATCAATTaGAAACAAGATGGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELVLIN*KQDGVQ
Trigger: TTGGACACCATCTTGTTTCAAATTGATGAGCACAAG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTCCTCCAATTTGTTTaGTCTTTCCACAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEFLQFV*SFHRLS
Trigger: GGAAAGTCTGTGGAAAGACAAAACAAATTGGAGGAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGGTTTGTACGCATCTTaGTTTGGATGCAGAGCGGCC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDGLYAS*FGCRAA
Trigger: GGCCGCTCTGCATCCAAACAAAGATGCGTACAAACC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCTTGCTTCCCTGGATaGGTGTGCCCTTGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLACFPG*VCPWVC
Trigger: GCACACCCAAGGGCACACCAATCCAGGGAAGCAAGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAAAGGATGGAGAATCTaGGGTGTGCTGGCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTKGWRI*GVLAAA
Trigger: TGCTGCCGCCAGCACACCCAAGATTCTCCATCCTTT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTGTTTCAGTGACGACCTaGGACTCCATTAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LNHIHCITQQMSLRTGKAVSVTT*DSISFS
Trigger: GGAGAAGCTAATGGAGTCCAAGGTCGTCACTGAAAC...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp GGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTTCGCAATGGAGGTAGCTTaGGTCAGAAACTTGCTAAGA +
Preference number: 5 (lower is better)
Translates to: GKAFMISLGSLLWPPSCFAMEVA*VRNLLR
Trigger: TCTTAGCAAGTTTCTGACCAAAGCTACCTCCATTGC...GAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCAAGCATTCTATTTTCCATaGCCTGGAACACTGACAGCG +
Preference number: 5 (lower is better)
Translates to: SLLWPPSCFRSMTNKQTQAFYFP*PGTLTA
Trigger: CGCTGTCAGTGTTCCAGGCAATGGAAAATAGAATGC...TTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp CAGCAGATGTCTTTGAGGACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGTTTTGCACCAAGGCTTaGTCTAGCGTTCCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: QQMSLRTGKAFMISLGSLFCTKA*SSVPCS
Trigger: CGAGCAGGGAACGCTAGACAAAGCCTTGGTGCAAAA...CAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGTCCTCAAAGACATCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp CTTACTTTGGAGCTGCTCAGTGACCCTGTTTACCTTTTCCATCAATaGCTGATTCTCCTCCGTGACCGCTTCTTTATCTACCTCGCAGAC +
Preference number: 5 (lower is better)
Translates to: LTLELLSDPVYLFHQ*LILLRDRFFIYLAD
Trigger: GTCTGCGAGGTAGATAAAGAAGCGGTCACGGAGGAGAATCAGTCATTGATGGAAAAGGTAAACAGGGTCACTGAGCAGCTCCAAAGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp TCATTACTGAAGCTAATGCAGGAGTTGATCAGCGTGGGACCACAATaGACGGACAGGAGATTCTCATTGGAATCCAGACTAGTCCGAGTG +
Preference number: 5 (lower is better)
Translates to: SLLKLMQELISVGPQ*TDRRFSLESRLVRV
Trigger: CACTCGGACTAGTCTGGATTCCAATGAGAATCTCCTGTCCGTTCATTGTGGTCCCACGCTGATCAACTCCTGCATTAGCTTCAGTAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
CDS TCA 90 bp CTCAGAAGAAAGTCAGCCAGTTCTGTTAGTGTAGTTAGGCCTTCCTaGTACTTTTGCACCAAGGCTTTGTCTAGCGTTCCCTGCTCGACA +
Preference number: 5 (lower is better)
Translates to: LRRKSASSVSVVRPS*YFCTKALSSVPCST
Trigger: TGTCGAGCAGGGAACGCTAGACAAAGCCTTGGTGCAAAAGTATCAGGAAGGCCTAACTACACTAACAGAACTGGCTGACTTTCTTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp CTTGAACAGAGTGATAGAATTCTGGCTGCACCCGGCTGTTTTTCTTaGTCCTTCGCTTCCTCCCCGATGACTCTTGTTCACTCTGATGAT +
Preference number: 5 (lower is better)
Translates to: LEQSDRILAAPGCFS*SFASSPMTLVHSDD
Trigger: ATCATCAGAGTGAACAAGAGTCATCGGGGAGGAAGCGAAGGATCAAGAAAAACAGCCGGGTGCAGCCAGAATTCTATCACTCTGTTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS TCA 90 bp ACCTCTCTCATCACTGTCCTGTTCCAGGACACTGTGACAGCTTCTTaGGAGGTTTCCCATAAGTGCACTGTTTTTGAGGGACTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: TSLITVLFQDTVTAS*EVSHKCTVFEGLLC
Trigger: ACAGAGAAGTCCCTCAAAAACAGTGCACTTATGGGAAACCTCTCAAGAAGCTGTCACAGTGTCCTGGAACAGGACAGTGATGAGAGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS GCA 90 bp TCCTCTTCCAGCCTTTTCAACGAATCACCAGCAAATTTAATATACTaGGTCATAAGAGTGACCAGGGCAGTGTACCGTGTCCGTAGGTCC +
Preference number: 5 (lower is better)
Translates to: SSSSLFNESPANLIY*VIRVTRAVYRVRRS
Trigger: GGACCTACGGACACGGTACACTGCCCTGGTCACTCTTATGACGCAGTATATTAAATTTGCTGGTGATTCGTTGAAAAGGCTGGAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 90 bp TGTGTCTCTAGAAACGTCTGGAGCTTGTCTGAGAGCTTCTCAAACTaGTCTACTTTGGCCTTTAGCTCCACCATCTTGGCTAGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: CVSRNVWSLSESFSN*STLAFSSTILASFS
Trigger: GGAAAAGCTAGCCAAGATGGTGGAGCTAAAGGCCAAAGTAGAGCAGTTTGAGAAGCTCTCAGACAAGCTCCAGACGTTTCTAGAGACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TTGTTCAGTAGTTCCAGCATACCAAAGTGGTGGTCCATTTCCTTCTaGAGGGACTTTAACTCGGCGATGGAACTCTCTGATTCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: LFSSSSIPKWWSISF*RDFNSAMELSDSVG
Trigger: TCCCACTGAATCAGAGAGTTCCATCGCCGAGTTAAAGTCCCTGCAGAAGGAAATGGACCACCACTTTGGTATGCTGGAACTACTGAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp AAGGGTTCGATTTCTTCTTTCTGGAATACCTTAAACACATCAAGCTaGTGGTTGATTGTCTCGGTTTCTGTACCTACGGGGCCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: KGSISSFWNTLNTSS*WLIVSVSVPTGPWD
Trigger: GTCCCAGGGCCCCGTAGGTACAGAAACCGAGACAATCAACCAGCAGCTTGATGTGTTTAAGGTATTCCAGAAAGAAGAAATCGAACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp AGGGAGTTGACATTTTGCTGTTTGCCAACCATGGTTTACCATAATTaGGTGTTAAAGGATGGAGAATCTTGGGTGTGCTGGCGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: RELTFCCLPTMVYHN*VLKDGESWVCWRQQ
Trigger: CTGCTGCCGCCAGCACACCCAAGATTCTCCATCCTTTAACACGCAATTATGGTAAACCATGGTTGGCAAACAGCAAAATGTCAACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp CCAATCACAAAGGCTTCCTGGTTACTAATTAGGCGGTTTTCAGTCTaGGTGAGGAGATCACACAGCCCTTGGAGTTTCTCTCTGTACTCT +
Preference number: 5 (lower is better)
Translates to: PITKASWLLIRRFSV*VRRSHSPWSFSLYS
Trigger: AGAGTACAGAGAGAAACTCCAAGGGCTGTGTGATCTCCTCACCCAGACTGAAAACCGCCTAATTAGTAACCAGGAAGCCTTTGTGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TCAAGTCCTCTGTGCCAAGAGAAGGCTTCACAACGGGAACCTGCTTaGTTGTCTCTTTTATCCATGTTTTCAGTGACTGAGCGAGGGTTT +
Preference number: 5 (lower is better)
Translates to: SSPLCQEKASQREPA*LSLLSMFSVTERGF
Trigger: AAACCCTCGCTCAGTCACTGAAAACATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTGTGAAGCCTTCTCTTGGCACAGAGGACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp ACTGTTTTAACTGGGCCTCTGTGGTCTGGAACTGGGTTAGATTATTaGAGGACTCTTCCAGCTTTTGTTGCCTGTCCATGGTCAACTGGT +
Preference number: 5 (lower is better)
Translates to: TVLTGPLWSGTGLDY*RTLPAFVACPWSTG
Trigger: ACCAGTTGACCATGGACAGGCAACAAAAGCTGGAAGAGTCCTCCAATAATCTAACCCAGTTCCAGACCACAGAGGCCCAGTTAAAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp GGTTCGATTTCTTCTTTCTGGAATACCTTAAACACATCAAGCTGCTaGTTGATTGTCTCGGTTTCTGTACCTACGGGGCCCTGGGACTCT +
Preference number: 5 (lower is better)
Translates to: GSISSFWNTLNTSSC*LIVSVSVPTGPWDS
Trigger: AGAGTCCCAGGGCCCCGTAGGTACAGAAACCGAGACAATCAACCAGCAGCTTGATGTGTTTAAGGTATTCCAGAAAGAAGAAATCGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp CTTGTGCTCATCAATTTGAAACAAGATGGTGTCCAAGATAAGACTTaGCCGAGAAGCCACGTTCAGAGTTTGCTCAGCCTGGGTAAGCCA +
Preference number: 5 (lower is better)
Translates to: LVLINLKQDGVQDKT*PRSHVQSLLSLGKP
Trigger: TGGCTTACCCAGGCTGAGCAAACTCTGAACGTGGCTTCTCGGCCAAGTCTTATCTTGGACACCATCTTGTTTCAAATTGATGAGCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TGGGAGTCTCCAAACCTGTATTTGTTATCACCGATCTGTTCAACTTaGAATCGCTTGGCACACTTACACTTGGCTACCTGCCTTGTGACC +
Preference number: 5 (lower is better)
Translates to: WESPNLYLLSPICST*NRLAHLHLATCLVT
Trigger: GGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTGAACAGATCGGTGATAACAAATACAGGTTTGGAGACTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182507.4
ENSMUST00000183100.8
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCCAGCAAAGACGACTaGAGAAGGGGCTTTCGGATC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSSKDD*RRGFRI
Trigger: GATCCGAAAGCCCCTTCTCAAGTCGTCTTTGCTGGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCCAGCAAAGACGACTaGAGAAGGGGCTTTCGGATC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSSKDD*RRGFRI
Trigger: GATCCGAAAGCCCCTTCTCAAGTCGTCTTTGCTGGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp ACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTACACTCTGATACTGTaGCTCAATTCTGTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: TGKAFMISLGSLLWPPSCYTLIL*LNSVGK
Trigger: TTTGCCAACAGAATTGAGCAACAGTATCAGAGTGTA...GCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TCACTGCTCTGGCCACCCAGCTGCTTCAGGAGTATGACAAATAAGCAAACCCAAATACACAGATTCCTCTaGCTCCTCTCTTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SLLWPPSCFRSMTNKQTQIHRFL*LLSFCR
Trigger: TCTGCAGAAAGAGAGGAGCAAGAGGAATCTGTGTAT...TTGGGTTTGCTTATTTGTCATACTCCTGAAGCAGCTGGGTGGCCAGAGCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTCTCAATGTTATTCTaGTCTGCTATAACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEFSMLF*SAITAS
Trigger: GGAAGCAGTTATAGCAGACAAGAATAACATTGAGAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACCACAATCTGATGTGTaGTCATTGCGGGAACCACCC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVPQSDV*SLREPP
Trigger: GGGTGGTTCCCGCAATGACAACACATCAGATTGTGG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCATGTCACTGACATTTaGGGTTTCACCCCCGTGTTC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDHVTDI*GFTPVF
Trigger: GAACACGGGGGTGAAACCCAAAATGTCAGTGACATG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTTAGACATTTCAGAGTaGATTGCAAGCTTGATCAGT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLELDISE*IASLIS
Trigger: ACTGATCAAGCTTGCAATCAACTCTGAAATGTCTAA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCAGCAGTTGTCTGCTTaGGCTGGGAGACAGATCTTG +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTQQLSA*AGRQIL
Trigger: CAAGATCTGTCTCCCAGCCAAAGCAGACAACTGCTG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTTCTCTCTGTACTCTaGCTGACGCTCTGCCACAAC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDFLSVL*LTLCHN
Trigger: GTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAAATGTTTGCTGGCTTaGGCCTCGCAGGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLKCLLA*ASQAWS
Trigger: GCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGCCTTTGCAGATTTTaGGGGTCCAAAGCAATGGGC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDCLCRF*GSKAMG
Trigger: GCCCATTGCTTTGGACCCCAAAAATCTGCAAAGGCA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTCTTCCAGCTGCCTTaGCAGATTTTTGGGGTCCAA +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLFQLP*QIFGVQ
Trigger: TTGGACCCCAAAAATCTGCAAAGGCAGCTGGAAGAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTATCCTTCATTTTCGCTaGCAGGGAGGAGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTILHFR*QGGGCG
Trigger: TCCACAGCCTCCTCCCTGCAAGCGAAAATGAAGGAT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAATCCTTCATTTTCGCTaGCAGGGAGGAGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVILHFR*QGGGCG
Trigger: TCCACAGCCTCCTCCCTGCAAGCGAAAATGAAGGAT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCTGCCTCAAATGACTaGTTCTGCTCCACCTGCAAC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSASND*FCSTCN
Trigger: GTTGCAGGTGGAGCAGAACAAGTCATTTGAGGCAGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGCACTTTGTTTACATTTaGCTTCAGTTCTGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEHFVYI*LQFCLK
Trigger: TTTGAGGCAGAACTGAAGCAAAATGTAAACAAAGTG...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACCGGGTGTCGAACTCTaGCAGCAGAATCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLPGVEL*QQNLDL
Trigger: CAGGTCCAGATTCTGCTGCAAGAGTTCGACACCCGG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTCAAGTACTCCTCTTaGACCAGTGCCGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVFKYSS*TSADRS
Trigger: GGACCTGTCGGCACTGGTCAAAGAGGAGTACTTGAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCCGCAGAGTCTCCACTaGCTCTCTGTACTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLPQSLH*LSVLEG
Trigger: GCCCTCAAGTACAGAGAGCAAGTGGAGACTCTGCGG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACATCAGAGGTTCCCTTaGAGTCTGCGGCTTCTACCA +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVHQRFP*SLRLLP
Trigger: TGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGATG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGTGGCCAGCATCATCTaGCAGGTTCTGTTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLVASII*QVLLAL
Trigger: CAGCGCCAACAGAACCTGCAAGATGATGCTGGCCAC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAGCTCCACCTCCACCTaGTCCAGCCAGTTACACAGC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSSTST*SSQLHS
Trigger: GCTGTGTAACTGGCTGGACAAGGTGGAGGTGGAGCT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGGTACCGGCGGCTGCTTGAGGCGTTTTCCTGTGACTCTGATTCTCTCTTGGAGTACTTCTTCAGTACCTaGTCCAGCTTTTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: WYRRLLEAFSCDSDSLLEYFFST*SSFFFI
Trigger: AATGAAGAAAAAGCTGGACAAGGTACTGAAGAAGTA...CTCCAAGAGAGAATCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCGGTACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTGCCGGTGCTCCTCTaGCTGTCTCCTCAGAGTCTC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLPVLL*LSPQSL
Trigger: GAGACTCTGAGGAGACAGCAAGAGGAGCACCGGCAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCCTGGACTGTGTGCTaGTCTGCCTCCTCTGTTACT +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSWTVC*SASSVT
Trigger: AGTAACAGAGGAGGCAGACAAGCACACAGTCCAGGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGCTTGTACTGGAGGTaGCTTGCTTCTTCGCCTTCA +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSLYWR*LASSPS
Trigger: TGAAGGCGAAGAAGCAAGCAACCTCCAGTACAAGCT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCGTTAAGCTGCTCCTaGGCTGTCTCTGGGAGACCT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLALSCS*AVSGRP
Trigger: AGGTCTCCCAGAGACAGCCAAGGAGCAGCTTAACGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAAGTCCTGGAGGGAGTaGTGGAAGTTCATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTKSWRE*WKFMAK
Trigger: CTTGGCCATGAACTTCCACAACTCCCTCCAGGACTT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAAGTCCTGGAGGGAGTaGTGGAAGTTCATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVKSWRE*WKFMAK
Trigger: CTTGGCCATGAACTTCCACAACTCCCTCCAGGACTT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCCTGGGTAAGCCAGTaGATGAAGTCCTGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLAWVSQ*MKSWRE
Trigger: CTCCCTCCAGGACTTCATCAACTGGCTTACCCAGGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGCCATTCCATCAGCTaGCTCCACGCTTCATGGAAC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSHSIS*LHASWN
Trigger: GTTCCATGAAGCGTGGAGCAAGCTGATGGAATGGCT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGGACCAGCTGGGCTTaGATTTTGTCTGGATCGTTG +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDWTSWA*ILSGSL
Trigger: CAACGATCCAGACAAAATCAAAGCCCAGCTGGTCCA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCAGACCTGCTGCCACTaGCTCACCAGCAGGTTAACC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLQTCCH*LTSRLT
Trigger: GGTTAACCTGCTGGTGAGCAAGTGGCAGCAGGTCTG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGGTTTGTACGCATCTTaGTTTGGATGCAGAGCGGCC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVGLYAS*FGCRAA
Trigger: GGCCGCTCTGCATCCAAACAAAGATGCGTACAAACC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCCCGCAGCTCCATGTaGGTCCTTCCTTTAGCTAGA +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSRSSM*VLPLAR
Trigger: TCTAGCTAAAGGAAGGACCAACATGGAGCTGCGGGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGCGGAAGTGGATCTGTaGGGGGAAGCTCCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLAEVDL*GEAPLD
Trigger: ATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCGC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCGGAAGTGGATCTGTaGGGGGAAGCTCCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLAEVDL*GEAPLD
Trigger: ATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCCCGCAGCTCCATGTaGGTCCTTCCTTTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSRSSM*VLPLAL
Trigger: CAGGGCTAAAGGAAGGACCAACATGGAGCTGCGGGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCCCGCAGCTCCATGTaGGTCCTTCCTTTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSRSSM*VLPLAL
Trigger: CAGGGCTAAAGGAAGGACCAACATGGAGCTGCGGGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATATCTTCCCGGTAAGTTaGCTATTCTCAACCATGGTT +
Preference number: 5 (lower is better)
Translates to: QRFELVTQFLGCTFSRHHIFPVS*LFSTMV
Trigger: AACCATGGTTGAGAATAGCAAACTTACCGGGAAGAT...ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp CAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTTAGCAGACACCATTGGTCACACTTTTGCTaGAACTCGCTTACTAGGTTT +
Preference number: 5 (lower is better)
Translates to: QRFELVTQFLGCTFSRHHWSHFC*NSLTRF
Trigger: AAACCTAGTAAGCGAGTTCAAGCAAAAGTGTGACCA...ATGGTGTCTGCTAAATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp CAGCAGATGTCTTTGAGGACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGGACACAAAGTCGTGCTaGATGCCTGAGAGATCGGTT +
Preference number: 5 (lower is better)
Translates to: QQMSLRTGKAFMISLGSLDTKSC*MPERSV
Trigger: AACCGATCTCTCAGGCATCAAGCACGACTTTGTGTC...CAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGTCCTCAAAGACATCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp ACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCCTGCTGGTCCATTTTTaGTTTGAGGTTTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: TGKAFMISLGSLLWPPSCLLVHF*FEVFNF
Trigger: GAAGTTGAAAACCTCAAACAAAAAATGGACCAGCAG...GCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp GGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGGCCACCCAGCTGCTTCTTCTCTATGTTGAGATaGGATATTTCCCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GKAFMISLGSLLWPPSCFFSMLR*DISLSP
Trigger: TGGGGAGAGGGAAATATCCAATCTCAACATAGAGAA...GAAGCAGCTGGGTGGCCAGAGCAGTGATCCCAGACTGATCATAAAAGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp TTCAGGCTGGGGTGTAAGGTTTGTGCAAATCCTGAGTTTAAGCTTTaGGTGATTCCTGATATCATGAGCTTGGTCTGTTCCGTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: FRLGCKVCANPEFKL*VIPDIMSLVCSVVS
Trigger: GCTGACCACGGAACAGACCAAGCTCATGATATCAGGAATCACTCAAAGCTTAAACTCAGGATTTGCACAAACCTTACACCCCAGCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 90 bp GCATTAGCTTCAGAGTCTGTAATGAATTTGGCTCTACCCCTAAACTaGAGTTTGGAGCTACAACTGAAGGGAACCCAGGTGCATACACCG +
Preference number: 5 (lower is better)
Translates to: ALASESVMNLALPLN*SLELQLKGTQVHTP
Trigger: CGGTGTATGCACCTGGGTTCCCTTCAGTTGTAGCTCCAAACTTCAGTTTAGGGGTAGAGCCAAATTCATTACAGACTCTGAAGCTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 90 bp CATTGTTTGCAACTCATAGTCCTTGACGGCAGCCGAGTACTGCTCTaGGTATTTCTGACACTCGTCCATTTTGCTCTGCTTCACCTCTAT +
Preference number: 5 (lower is better)
Translates to: HCLQLIVLDGSRVLL*VFLTLVHFALLHLY
Trigger: ATAGAGGTGAAGCAGAGCAAAATGGACGAGTGTCAGAAATACTCAGAGCAGTACTCGGCTGCCGTCAAGGACTATGAGTTGCAAACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 90 bp TGCTGGATGGCTTGCTTCTCGCGGACTATGTTCTTGGACTCTGCCTaGATCCTCTGCATCATCAATTTGGTTTCATTATTCTGCCTAGTG +
Preference number: 5 (lower is better)
Translates to: CWMACFSRTMFLDSA*ILCIINLVSLFCLV
Trigger: CACTAGGCAGAATAATGAAACCAAATTGATGATGCAGAGGATTCAGGCAGAGTCCAAGAACATAGTCCGCGAGAAGCAAGCCATCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp GATGCAGGGCTTGCTCCCTCATCGTCTCTAGTTCAGACAGTCGCGTaGTTGGGTTTTTATCATCAAAAGTTATCTGCAGTTCAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: DAGLAPSSSLVQTVA*LGFYHQKLSAVQCL
Trigger: CAAGCACTGAACTGCAGATAACTTTTGATGATAAAAACCCAATCACGCGACTGTCTGAACTAGAGACGATGAGGGAGCAAGCCCTGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp GCACCGGCTCGGTGTCATCTACAACTTTTTGGCAAGGCTTTCTTCTaGAATACTTTCTTCCGGGAGAGTATTTTTCAGGACTCAAGGGAC +
Preference number: 5 (lower is better)
Translates to: APARCHLQLFGKAFF*NTFFRESIFQDSRD
Trigger: GTCCCTTGAGTCCTGAAAAATACTCTCCCGGAAGAAAGTATTTCAGAAGAAAGCCTTGCCAAAAAGTTGTAGATGACACCGAGCCGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS TCA 90 bp TGCACTGTTTTTGAGGGACTTCTCTGTGACACAGAGAATGGGACTTaGGCTGGCTGCCGTTTGGGAAAGAGAAACATTGTCTTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: CTVFEGLLCDTENGT*AGCRLGKRNIVFSQ
Trigger: CTGAGAAAAGACAATGTTTCTCTTTCCCAAACGGCAGCCAGCTCAAGTCCCATTCTCTGTGTCACAGAGAAGTCCCTCAAAAACAGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS GCA 90 bp GTCCCGTTCTTTGTGTGTCTTGAACATCTCATCGCTGATGGCTTTTaGTTTCTGCAACTCGTCTTCCAATGCATGGAACACCTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: VPFFVCLEHLIADGF*FLQLVFQCMEHLSL
Trigger: AAGAGAGAGGTGTTCCATGCATTGGAAGACGAGTTGCAGAAAGCAAAAGCCATCAGCGATGAGATGTTCAAGACACACAAAGAACGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 90 bp ATGCTAACGCTTCTTCCACACTTCAGTGTTATTCTGCCAGCTTCCTaGGGTCTCACTGGTAAAAGCCACATCCTGGTATTTTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: MLTLLPHFSVILPAS*GLTGKSHILVFSCK
Trigger: TTTGCAGGAAAATACCAGGATGTGGCTTTTACCAGTGAGACCGCAGGAAGCTGGCAGAATAACACTGAAGTGTGGAAGAAGCGTTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 90 bp AGTTCTGCCCTTTTCTCTTCCAGTCTCTTCATGAACTCTTTATGTTaGTCAATGAGAGTCCGGAGAGCATCCTCATCATCTGGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: SSALFSSSLFMNSLC*SMRVRRASSSSGRA
Trigger: TGCTCTCCCAGATGATGAGGATGCTCTCCGGACTCTCATTGAGCAACATAAAGAGTTCATGAAGAGACTGGAAGAGAAAAGGGCAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TCTCTGCTGGATGGCTTGCTTCTCGCGGACTATGTTCTTGGACTCTaGCTGAATCCTCTGCATCATCAATTTGGTTTCATTATTCTGCCT +
Preference number: 5 (lower is better)
Translates to: SLLDGLLLADYVLGL*LNPLHHQFGFIILP
Trigger: AGGCAGAATAATGAAACCAAATTGATGATGCAGAGGATTCAGGCAGAGTCCAAGAACATAGTCCGCGAGAAGCAAGCCATCCAGCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp CAGGAGCCTGCTCCTGAACTCAGGATCAACGATGCCATGAAGAACTaGATCTTCAACACAGTAAGTCTGACCAGAAACCGGATCAATTAT +
Preference number: 5 (lower is better)
Translates to: QEPAPELRINDAMKN*IFNTVSLTRNRINY
Trigger: ATAATTGATCCGGTTTCTGGTCAGACTTACTGTGTTGAAGATGCAGTTCTTCATGGCATCGTTGATCCTGAGTTCAGGAGCAGGCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp CTTTCTAGGACTTTGGAAAACAAGGCGGAGGAAATCAAGTTCTGTTaGAAAGCCTGTTGTAAGGTCAGGTGTTCACCTGTGGCTGGAACA +
Preference number: 5 (lower is better)
Translates to: LSRTLENKAEEIKFC*KACCKVRCSPVAGT
Trigger: TGTTCCAGCCACAGGTGAACACCTGACCTTACAACAGGCTTTCCAACAGAACTTGATTTCCTCCGCCTTGTTTTCCAAAGTCCTAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp CTTCGCCATCAGAACCACCCTCTTCTTGCCTGTAATCATGAACTGTaGATGGCTGGAGTTTACAAAAAGAGAGCCACCTCTTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: LRHQNHPLLACNHEL*MAGVYKKRATSWHF
Trigger: AAAATGCCAAGAGGTGGCTCTCTTTTTGTAAACTCCAGCCATCCACAGTTCATGATTACAGGCAAGAAGAGGGTGGTTCTGATGGCGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp GAAACGTCTGGAGCTTGTCTGAGAGCTTCTCAAACTGCTCTACTTTaGCCTTTAGCTCCACCATCTTGGCTAGCTTTTCCTTGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: ETSGACLRASQTALL*PLAPPSWLAFPCVS
Trigger: AGAAACACAAGGAAAAGCTAGCCAAGATGGTGGAGCTAAAGGCCAAAGTAGAGCAGTTTGAGAAGCTCTCAGACAAGCTCCAGACGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TTTCCCAGGAAGAACCTGTATTTGTTATCACCGATCTGTTCAACTTaGAATCGCTTGGCACACTTACACTTGGCTACCTGCCTTGTGACC +
Preference number: 5 (lower is better)
Translates to: FPRKNLYLLSPICST*NRLAHLHLATCLVT
Trigger: GGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTGAACAGATCGGTGATAACAAATACAGGTTCTTCCTGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp CTTCGCATCTCTGCTGGATGGCTTGCTTCTCGCGGACTATGTTCTTaGACTCTGCCTGAATCCTCTGCATCATCAATTTGGTTTCATTAT +
Preference number: 5 (lower is better)
Translates to: LRISAGWLASRGLCS*TLPESSASSIWFHY
Trigger: ATAATGAAACCAAATTGATGATGCAGAGGATTCAGGCAGAGTCCAAGAACATAGTCCGCGAGAAGCAAGCCATCCAGCAGAGATGCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp TACTTTTTCCCAGTTAGGGGATCGATGATCCCTCCTGTACAGATTTaGGCTTCAAGGCATCTGAGGGCTGTAACCCTATCAACCAAGTTT +
Preference number: 5 (lower is better)
Translates to: YFFPVRGSMIPPVQI*ASRHLRAVTLSTKF
Trigger: AAACTTGGTTGATAGGGTTACAGCCCTCAGATGCCTTGAAGCCCAAATCTGTACAGGAGGGATCATCGATCCCCTAACTGGGAAAAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTTCGGATGATAACCTaGAAGGAGTTTGATGCGCCC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVRMIT*KEFDAP
Trigger: GGGCGCATCAAACTCCTTCAAGGTTATCATCCGAAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGTTCGGATGATAACCTaGAAGGAGTTTGATGCGCCC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVVRMIT*KEFDAP
Trigger: GGGCGCATCAAACTCCTTCAAGGTTATCATCCGAAC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTAAGTCAACTGCTTCTTaGTTTGGTGGGGGAACAGTA +
Preference number: 5 (lower is better)
Translates to: LNHIHCITQQMSLRTGKAKSTAS*FGGGTV
Trigger: TACTGTTCCCCCACCAAACAAAGAAGCAGTTGACTT...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp CTTAACCACATCCACTGCATCACACAGCAGATGTCTTTGAGGACGGGAAAAGCTCCTGTAGGTCATTGTTaGCAACTCATAGTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: LNHIHCITQQMSLRTGKAPVGHC*QLIVLD
Trigger: GTCAAGGACTATGAGTTGCAAACAATGACCTACAGG...AGCTTTTCCCGTCCTCAAAGACATCTGCTGTGTGATGCAGTGGATGTGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTTTCAGTCTCCTCCTaGAGGGCCGTAGTCACTGCC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFSVSS*RAVVTA
Trigger: GGCAGTGACTACGGCCCTCAAGGAGGAGACTGAAAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCCAGCAGGTTACCATaGACTTCATCCTCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSSRLP*TSSSSP
Trigger: TGGCGAAGAGGATGAAGTCAATGGTAACCTGCTGGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTCTTGCTGCAAGACTaGGCAGCGTCTATCACCCTG +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLLLQD*AASITL
Trigger: CAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGAACTTCTCTGTGGGTaGCGGAAGTCTCGACGCTGT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLELLCG*RKSRRC
Trigger: ACAGCGTCGAGACTTCCGCAACCCACAGAGAAGTTC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGGCTCCCGTAAATGTTaGCTGGCTTTGGCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSGSRKC*LALASQ
Trigger: CTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATGCCTTTGCAGATTTTaGGGGTCCAAAGCAATGGGC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVCLCRF*GSKAMG
Trigger: GCCCATTGCTTTGGACCCCAAAAATCTGCAAAGGCA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTCTGGATGTCATTCTaGGCAGGAAGCAGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFWMSF*AGSSEP
Trigger: GGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCAAACTGCTCTACTTaGGCCTTTAGCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSNCST*AFSSTI
Trigger: GATGGTGGAGCTAAAGGCCAAAGTAGAGCAGTTTGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCCATGGTCAACTGGTaGAGCTCTTGCCACTTAGTG +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSMVNW*SSCHLV
Trigger: CACTAAGTGGCAAGAGCTCAACCAGTTGACCATGGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGGACTCTTCCAGCTTTaGTTGCCTGTCCATGGTCAA +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTGLFQL*LPVHGQ
Trigger: TTGACCATGGACAGGCAACAAAAGCTGGAAGAGTCC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTGTGTTCAACATGTTaGGGTCAATGGACAAGGGGC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVCSTC*GQWTRG
Trigger: GCCCCTTGTCCATTGACCCAAACATGTTGAACACAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCGCAGAGTCTCCACTaGCTCTCTGTACTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPQSLH*LSVLEG
Trigger: GCCCTCAAGTACAGAGAGCAAGTGGAGACTCTGCGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTACGCTGAGCAGGCTATaGGCTGTGTTGTTCAGTAGT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTTLSRL*AVLFSS
Trigger: ACTACTGAACAACACAGCCAATAGCCTGCTCAGCGT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGCGGACGGAGGCTTTaGATTGGCCACAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSGRRL*IGHKLL
Trigger: GAGGAGCTTGTGGCCAATCAAAAGCCTCCGTCCGCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGTCTTCCAGAAGTCTTaGCAGAAGCTTCTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDVFQKS*QKLLFL
Trigger: CAGGAACAGAAGCTTCTGCAAAGACTTCTGGAAGAC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACCAGTTGACGGTTCCTaGCTTCAGCTCTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLPVDGS*LQLCSG
Trigger: TCCTGAGCAGAGCTGAAGCAAGGAACCGTCAACTGG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGCTCCACCTCCACCTaGTCCAGCCAGTTACACAGC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSSTST*SSQLHS
Trigger: GCTGTGTAACTGGCTGGACAAGGTGGAGGTGGAGCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACTGTCTCTCTTGCACTaGACTGGCAGCTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLSLLH*TGSFSF
Trigger: AAAGGAGAAGCTGCCAGTCAAGTGCAAGAGAGACAG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCTGTCTCTCTTGCACTaGACTGGCAGCTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLSLLH*TGSFSF
Trigger: AAAGGAGAAGCTGCCAGTCAAGTGCAAGAGAGACAG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTCGTCAATGCTCTTCTaGACAATGGGTTTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSSMLF*TMGLSG
Trigger: GCCTGACAAACCCATTGTCAAGAAGAGCATTGACGA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTCCGTCAGCCACTGTaGCAAATCTTCGATTTCACC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVRQPL*QIFDFT
Trigger: GGTGAAATCGAAGATTTGCAACAGTGGCTGACGGAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTCTTCTCGTTGAGTTaGCTCTTCACGGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDFFSLS*LFTDSH
Trigger: GTGGGAATCCGTGAAGAGCAAACTCAACGAGAAGAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGCCTGGGTAAGCCAGTaGATGAAGTCCTGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSAWVSQ*MKSWRE
Trigger: CTCCCTCCAGGACTTCATCAACTGGCTTACCCAGGC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAGCCACGTTCAGAGTTaGCTCAGCCTGGGTAAGCCA +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSHVQS*LSLGKP
Trigger: TGGCTTACCCAGGCTGAGCAAACTCTGAACGTGGCT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGCTTCATGGAACTGCTaGGCCCTCTTCCTGGCTTCG +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSASWNC*ALFLAS
Trigger: CGAAGCCAGGAAGAGGGCCAAGCAGTTCCATGAAGC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGGACCAGCTGGGCTTaGATTTTGTCTGGATCGTTG +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTWTSWA*ILSGSL
Trigger: CAACGATCCAGACAAAATCAAAGCCCAGCTGGTCCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAGTTCACTCAGCATGTaGTCCAGCTTCAGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDSSLSM*SSFRLS
Trigger: TGACAACCTGAAGCTGGACAACATGCTGAGTGAACT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACAGATGGTGTCCCATTaGTCCCTAAGTTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVQMVSH*SLSSLS
Trigger: GCTGAGTGAACTTAGGGACAAATGGGACACCATCTG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCAGATGGTGTCCCATTaGTCCCTAAGTTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTQMVSH*SLSSLS
Trigger: GCTGAGTGAACTTAGGGACAAATGGGACACCATCTG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCGACTGGTAGGAAACTaGGAGGAGAGAATCCCGTCG +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLRLVGN*EERIPS
Trigger: CGACGGGATTCTCTCCTCCAAGTTTCCTACCAGTCG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTACCTCGTCCTCAATTTaGTCAGCATCCGTGATGGGT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTTSSSI*SASVMG
Trigger: ACCCATCACGGATGCTGACAAAATTGAGGACGAGGT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACCTCGTCCTCAATTTaGTCAGCATCCGTGATGGGT +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVTSSSI*SASVMG
Trigger: ACCCATCACGGATGCTGACAAAATTGAGGACGAGGT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAAGCTAATGCAGGAGTaGATCAGCGTGGGACCACAA +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVKLMQE*ISVGPQ
Trigger: TTGTGGTCCCACGCTGATCAACTCCTGCATTAGCTT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS TCA 90 bp CCAGCTAAGTACAACTCAGGTTTCTCAATACCTACAGGAAAGCCCTaGGGGCAACATACTTTGTTCTCCACACCTAAGCTCTCATCCATT +
Preference number: 5 (lower is better)
Translates to: PAKYNSGFSIPTGKP*GQHTLFSTPKLSSI
Trigger: AATGGATGAGAGCTTAGGTGTGGAGAACAAAGTATGTTGCCCTCAGGGCTTTCCTGTAGGTATTGAGAAACCTGAGTTGTACTTAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 90 bp TGCACGCTGATGAGCAGGTTCTTGATGAGCACGACATCTTGTTTCTaGCTGAAATACTTCAGGTGGGTTCCAGTCTTGTCCAACTCTATT +
Preference number: 5 (lower is better)
Translates to: CTLMSRFLMSTTSCF*LKYFRWVPVLSNSI
Trigger: AATAGAGTTGGACAAGACTGGAACCCACCTGAAGTATTTCAGTCAGAAACAAGATGTCGTGCTCATCAAGAACCTGCTCATCAGCGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp TTGTCCCCTGGTAAGCCATGGCTGGATATCTCTTTCAGGAGGCTGTaGAAAGCTTCGAGATCTTTCCTGTGTTCTAAGAATTTAGCAGTT +
Preference number: 5 (lower is better)
Translates to: LSPGKPWLDISFRRL*KASRSFLCSKNLAV
Trigger: AACTGCTAAATTCTTAGAACACAGGAAAGATCTCGAAGCTTTGCACAGCCTCCTGAAAGAGATATCCAGCCATGGCTTACCAGGGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 90 bp CGGGAAAGTCGGGGCATTCTGCTGCTTTACAGGGAGTTGACATTTTaGTGTTTGCCAACCATGGTTTACCATAATTGCGTGTTAAAGGAT +
Preference number: 5 (lower is better)
Translates to: RESRGILLLYRELTF*CLPTMVYHNCVLKD
Trigger: ATCCTTTAACACGCAATTATGGTAAACCATGGTTGGCAAACAGCAAAATGTCAACTCCCTGTAAAGCAGCAGAATGCCCCGACTTTCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TCATCGCTGATGGCTTTTGCTTTCTGCAACTCGTCTTCCAATGCATaGAACACCTCTCTCTTCTCATCTACTTCTGATCGCCATTGCTTT +
Preference number: 5 (lower is better)
Translates to: SSLMAFAFCNSSSNA*NTSLFSSTSDRHCF
Trigger: AAAGCAATGGCGATCAGAAGTAGATGAGAAGAGAGAGGTGTTCCATGCATTGGAAGACGAGTTGCAGAAAGCAAAAGCCATCAGCGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 90 bp GCCATCAGAACCACCCTCTTCTTGCCTGTAATCATGAACTGTGGATaGCTGGAGTTTACAAAAAGAGAGCCACCTCTTGGCATTTTTACA +
Preference number: 5 (lower is better)
Translates to: AIRTTLFLPVIMNCG*LEFTKREPPLGIFT
Trigger: TGTAAAAATGCCAAGAGGTGGCTCTCTTTTTGTAAACTCCAGCCATCCACAGTTCATGATTACAGGCAAGAAGAGGGTGGTTCTGATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp AGTAATTCAGACCCAAGGCCTCTTTGCTCTGGATCACAGTCCATCTaGGTTAATACTTTAGCTAACTCAGAGATGCCTGGAGTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: SNSDPRPLCSGSQSI*VNTLANSEMPGVSW
Trigger: CCAAGAAACTCCAGGCATCTCTGAGTTAGCTAAAGTATTAACCCAGATGGACTGTGATCCAGAGCAAAGAGGCCTTGGGTCTGAATTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp CTCAATTTTGTCAGCATCCGTGATGGGTTTGTACGCATCTTTGTTTaGATGCAGAGCGGCCACGAATTCATAGTAGTCAATGTACCCATC +
Preference number: 5 (lower is better)
Translates to: LNFVSIRDGFVRIFV*MQSGHEFIVVNVPI
Trigger: GATGGGTACATTGACTACTATGAATTCGTGGCCGCTCTGCATCCAAACAAAGATGCGTACAAACCCATCACGGATGCTGACAAAATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTGTCCCGCTCATCTTaGTACCTCTCCAGGACATCC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLSRSS*YLSRTS
Trigger: GGATGTCCTGGAGAGGTACAAAGATGAGCGGGACAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCCTGATATCATGAGCTaGGTCTGTTCCGTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLPDIMS*VCSVVS
Trigger: GCTGACCACGGAACAGACCAAGCTCATGATATCAGG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACCTGATATCATGAGCTaGGTCTGTTCCGTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLPDIMS*VCSVVS
Trigger: GCTGACCACGGAACAGACCAAGCTCATGATATCAGG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTGTCACAGCTGTACTaGCGCTGGATGGCATCTTTC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLSQLY*RWMASF
Trigger: GAAAGATGCCATCCAGCGCAAGTACAGCTGTGACAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTGTCACAGCTGTACTaGCGCTGGATGGCATCTTTC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLSQLY*RWMASF
Trigger: GAAAGATGCCATCCAGCGCAAGTACAGCTGTGACAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCGTTCTTTGTGTGTCTaGAACATCTCATCGCTGATG +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDRSLCV*NISSLM
Trigger: CATCAGCGATGAGATGTTCAAGACACACAAAGAACG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCCTGGTCTTTTTCAGTaGCATACCCATCAAACAGCA +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDPGLFQ*HTHQTA
Trigger: TGCTGTTTGATGGGTATGCAACTGAAAAAGACCAGG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTTTCTATCTTGGTTTaGCTCTCTTCCAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDFSILV*LSSSCL
Trigger: GAGGCAGCTGGAAGAGAGCAAAACCAAGATAGAAAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGAACTTCTCTGTGGGTaGCGGAAGTCTCGACGCTGT +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSELLCG*RKSRRC
Trigger: ACAGCGTCGAGACTTCCGCAACCCACAGAGAAGTTC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTGGATGTCATTCTaGGCAGGAAGCAGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSFWMSF*AGSSEP
Trigger: GGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTATCCTTCATTTTCGCTaGCAGGGAGGAGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLILHFR*QGGGCG
Trigger: TCCACAGCCTCCTCCCTGCAAGCGAAAATGAAGGAT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACACAACGGGAACCTGCTaGGTTGTCTCTTTTATCCAT +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDTTGTC*VVSFIH
Trigger: ATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTGT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTCAAGTACTCCTCTTaGACCAGTGCCGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFKYSS*TSADRS
Trigger: GGACCTGTCGGCACTGGTCAAAGAGGAGTACTTGAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGGCGTCAAGCCATGCTaGGAAATCCTTAGACATTTG +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTGVKPC*EILRHL
Trigger: CAAATGTCTAAGGATTTCCAAGCATGGCTTGACGCC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGGCGTCAAGCCATGCTaGGAAATCCTTAGACATTTG +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVGVKPC*EILRHL
Trigger: CAAATGTCTAAGGATTTCCAAGCATGGCTTGACGCC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCAAGACATCCAGCTTaGCGGAAATCGGGGGAGAGT +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPRHPA*RKSGES
Trigger: ACTCTCCCCCGATTTCCGCAAAGCTGGATGTCTTGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACATCAGAGGTTCCCTTaGAGTCTGCGGCTTCTACCA +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLHQRFP*SLRLLP
Trigger: TGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGATG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCATCAGAGGTTCCCTTaGAGTCTGCGGCTTCTACCA +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLHQRFP*SLRLLP
Trigger: TGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGATG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCTTCTTGTAGAGCCTaGTGCTGTGAAATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSSCRA*CCEICS
Trigger: GGAGCAGATTTCACAGCACAAGGCTCTACAAGAAGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCACCTGTGGTCTGTTaGAGCAGCTCTAAGCCGTTC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSPVVC*SSSKPF
Trigger: GAACGGCTTAGAGCTGCTCAAACAGACCACAGGTGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCAGTTACACAGCTCCTaGTGCATGGACTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSQLHSS*CMDCSW
Trigger: CCAGCTGCAGTCCATGCACAAGGAGCTGTGTAACTG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGCAGAGGTCTGGTCTaGCTCAAGTCTGATGTCACC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSRGLV*LKSDVT
Trigger: GGTGACATCAGACTTGAGCAAGACCAGACCTCTGCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACGACATCTTCTTTAATTaGACTGTAGAGGGTGTCGGC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDDIFFN*TVEGVG
Trigger: GCCGACACCCTCTACAGTCAAATTAAAGAAGATGTC...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAATCACATCCAGCAGTTaGGCTTCCCGTTCTTCGACC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLITSSS*ASRSST
Trigger: GGTCGAAGAACGGGAAGCCAAACTGCTGGATGTGAT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATCGTCAATGCTCTTCTaGACAATGGGTTTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVSSMLF*TMGLSG
Trigger: GCCTGACAAACCCATTGTCAAGAAGAGCATTGACGA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCCTGGACTGTGTGCTaGTCTGCCTCCTCTGTTACT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSWTVC*SASSVT
Trigger: AGTAACAGAGGAGGCAGACAAGCACACAGTCCAGGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCCTGGACTGTGTGCTaGTCTGCCTCCTCTGTTACT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSWTVC*SASSVT
Trigger: AGTAACAGAGGAGGCAGACAAGCACACAGTCCAGGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAGAGCACCCTCGAGCTaGTGCTGTCTGCTGACAATT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLRAPSS*CCLLTI
Trigger: AATTGTCAGCAGACAGCACAAGCTCGAGGGTGCTCT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTGAGAATTCTGAGCTaGTACTGGAGGTTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLRILS*YWRLLA
Trigger: AGCAAGCAACCTCCAGTACAAGCTCAGAATTCTCAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTCTTCTCGTTGAGTTaGCTCTTCACGGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTFFSLS*LFTDSH
Trigger: GTGGGAATCCGTGAAGAGCAAACTCAACGAGAAGAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAAGTCCTGGAGGGAGTaGTGGAAGTTCATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLKSWRE*WKFMAK
Trigger: CTTGGCCATGAACTTCCACAACTCCCTCCAGGACTT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGGTGGGTTCCAGTCTaGTCCAACTCTATTATCTGC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTRWVPV*SNSIIC
Trigger: GCAGATAATAGAGTTGGACAAGACTGGAACCCACCT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATTTTGTCTGGATCGTaGGCGATTTCCAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDILSGS*AISSSE
Trigger: TTCTGAGCTGGAAATCGCCAACGATCCAGACAAAAT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTGTCCAGCTTCAGGTaGTCATCTGCCAGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLSSFR*SSAREV
Trigger: AACCTCCCTGGCAGATGACAACCTGAAGCTGGACAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTGTCCAGCTTCAGGTaGTCATCTGCCAGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLSSFR*SSAREV
Trigger: AACCTCCCTGGCAGATGACAACCTGAAGCTGGACAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGTTCACTCAGCATGTaGTCCAGCTTCAGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSSLSM*SSFRLS
Trigger: TGACAACCTGAAGCTGGACAACATGCTGAGTGAACT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTATGTCGAAATCGAAGTaGGCAAATTCCCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTMSKSK*ANSLSS
Trigger: GGAGCTGAGGGAATTTGCCAACTTCGATTTCGACAT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCGACTGGTAGGAAACTaGGAGGAGAGAATCCCGTCG +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSRLVGN*EERIPS
Trigger: CGACGGGATTCTCTCCTCCAAGTTTCCTACCAGTCG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTGGCACACTTACACTaGGCTACCTGCCTTGTGACC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLAHLH*ATCLVT
Trigger: GGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTGGCACACTTACACTaGGCTACCTGCCTTGTGACC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLAHLH*ATCLVT
Trigger: GGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGGGATTTTAGAAGGCTaGGCTGTGGATGGCCGAGAA +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLGILEG*AVDGRE
Trigger: TTCTCGGCCATCCACAGCCAAGCCTTCTAAAATCCC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAAAGGATGGAGAATCTaGGGTGTGCTGGCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSKGWRI*GVLAAA
Trigger: TGCTGCCGCCAGCACACCCAAGATTCTCCATCCTTT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTTCTAGCCTACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGTTCTTGGGAACTACCTaGCTCAGAAGAAAGTCAGCC +
Preference number: 5 (lower is better)
Translates to: FLAYKKLTALRVGDTVPRFLGTT*LRRKSA
Trigger: GGCTGACTTTCTTCTGAGCAAGGTAGTTCCCAAGAA...CCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTAGGCTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp GTGGTGCTCTGTGAGGTGCTCTTTCAGGATGTACAATGGATGACATCATTAATGACTGACATCATTTTATaGCTGACGGGGTGGCTGATC +
Preference number: 5 (lower is better)
Translates to: VVLCEVLFQDVQWMTSLMTDIIL*LTGWLI
Trigger: GATCAGCCACCCCGTCAGCAATAAAATGATGTCAGT...CATTAATGATGTCATCCATTGTACATCCTGAAAGAGCACCTCACAGAGCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp AGGTTCTCACATTCAAGTATGTACCCGGCAATCTCTGCTTCATTCTaGAACTGGACTCCCGACTCTAATCTTTTGGAATCAGACTGGAGA +
Preference number: 5 (lower is better)
Translates to: RFSHSSMYPAISASF*NWTPDSNLLESDWR
Trigger: TCTCCAGTCTGATTCCAAAAGATTAGAGTCGGGAGTCCAGTTTCAGAATGAAGCAGAGATTGCCGGGTACATACTTGAATGTGAGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 90 bp CTCTCTGCCCTTACTTCTGATGAGTTACTAATGGGGGAAATGCCATaGCTGGGCACATTCGAAACTTCATTTGGCAACTCAGACAAGATA +
Preference number: 5 (lower is better)
Translates to: LSALTSDELLMGEMP*LGTFETSFGNSDKI
Trigger: TATCTTGTCTGAGTTGCCAAATGAAGTTTCGAATGTGCCCAGTCATGGCATTTCCCCCATTAGTAACTCATCAGAAGTAAGGGCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 90 bp TTTCTCTTAGTCTGGGGGCACATTATATCCCTGACATATGACTTTTaGTCTTTGAGTCTGGTGGCGATGAGGACATCAATGATACCGACG +
Preference number: 5 (lower is better)
Translates to: FLLVWGHIISLTYDF*SLSLVAMRTSMIPT
Trigger: CGTCGGTATCATTGATGTCCTCATCGCCACCAGACTCAAAGATCAAAAGTCATATGTCAGGGATATAATGTGCCCCCAGACTAAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 90 bp TCTTTGTGTGTCTTGAACATCTCATCGCTGATGGCTTTTGCTTTCTaGAACTCGTCTTCCAATGCATGGAACACCTCTCTCTTCTCATCT +
Preference number: 5 (lower is better)
Translates to: SLCVLNISSLMAFAF*NSSSNAWNTSLFSS
Trigger: AGATGAGAAGAGAGAGGTGTTCCATGCATTGGAAGACGAGTTGCAGAAAGCAAAAGCCATCAGCGATGAGATGTTCAAGACACACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 90 bp CTGGAACCCAGCCTCTTCTCTTGTTTTAAGGTCGTGACTTCTGTATaGATGCCACACTGTTTGTTCTTAGCTATCTCTAAGGGTGTCAAA +
Preference number: 5 (lower is better)
Translates to: LEPSLFSCFKVVTSV*MPHCLFLAISKGVK
Trigger: TTTGACACCCTTAGAGATAGCTAAGAACAAACAGTGTGGCATGCATACAGAAGTCACGACCTTAAAACAAGAGAAGAGGCTGGGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 90 bp GATGCAGTAGAAATGAGCTGCTTTGCTCGATTTAGTTCTTTTAGTTaGCGCAGAACTTGTTCATCAATGAGGCCGTGGCTTTCAGCATCT +
Preference number: 5 (lower is better)
Translates to: DAVEMSCFARFSSFS*RRTCSSMRPWLSAS
Trigger: AGATGCTGAAAGCCACGGCCTCATTGATGAACAAGTTCTGCGCCAACTAAAAGAACTAAATCGAGCAAAGCAGCTCATTTCTACTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp AGAATTCTTCTGCCAACTTTAGATCTTTCCTTAAAAATACAGCGATaGGGGCCAATCCCAACTCAAAGGCCTCTAACTGCTTCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: RILLPTLDLSLKIQR*GPIPTQRPLTASAD
Trigger: GTCAGCTGAAGCAGTTAGAGGCCTTTGAGTTGGGATTGGCCCCCATCGCTGTATTTTTAAGGAAAGATCTAAAGTTGGCAGAAGAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS CCA 90 bp CCTGTCCCCAAGGGTTCAGACACTTCTAACAGCTTAAGTCCTGTGTaGAAATCAAAATCAGCTTTCTCCAGGGCCTCTTTATATGTCAAT +
Preference number: 5 (lower is better)
Translates to: PVPKGSDTSNSLSPV*KSKSAFSRASLYVN
Trigger: ATTGACATATAAAGAGGCCCTGGAGAAAGCTGATTTTGATTTCCACACAGGACTTAAGCTGTTAGAAGTGTCTGAACCCTTGGGGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAAGTCAACTGCTTCTTaGTTTGGTGGGGGAACAGTA +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTKSTAS*FGGGTV
Trigger: TACTGTTCCCCCACCAAACAAAGAAGCAGTTGACTT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CAGCAGATGTCTTTGAGGACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGTGTTGCTCAATTCTGTaGGCAAAGTCAACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: QQMSLRTGKAFMISLGSLCCSIL*AKSTAS
Trigger: AGAAGCAGTTGACTTTGCCAACAGAATTGAGCAACA...CAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGTCCTCAAAGACATCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAATACACAGATTCCTCTaGCTCCTCTCTTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVIHRFL*LLSFCR
Trigger: TCTGCAGAAAGAGAGGAGCAAGAGGAATCTGTGTAT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTATACACAGATTCCTCTaGCTCCTCTCTTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTIHRFL*LLSFCR
Trigger: TCTGCAGAAAGAGAGGAGCAAGAGGAATCTGTGTAT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCCTGTAGGTCATTGTTaGCAACTCATAGTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTPVGHC*QLIVLD
Trigger: GTCAAGGACTATGAGTTGCAAACAATGACCTACAGG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAAAACCGATGCTGTGTaGTTATCTATGATCCCCAGC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVKTDAV*LSMIPS
Trigger: GCTGGGGATCATAGATAACAACACAGCATCGGTTTT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAAAGAGAGCCACCTCTaGGCATTTTTACAATCTTCC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDKESHL*AFLQSS
Trigger: GGAAGATTGTAAAAATGCCAAGAGGTGGCTCTCTTT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACATGTCACTGACATTTaGGGTTTCACCCCCGTGTTC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLHVTDI*GFTPVF
Trigger: GAACACGGGGGTGAAACCCAAAATGTCAGTGACATG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTCAGAACGGACAATGTaGTCAGAAGATGGGCTGATT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSERTM*SEDGLI
Trigger: AATCAGCCCATCTTCTGACAACATTGTCCGTTCTGA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGATGCCTGGAGTTTCTaGGGGAGGTTGGTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLDAWSF*GRLVLL
Trigger: AAGCAAAACCAACCTCCCCAAGAAACTCCAGGCATC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTTCTCTCTGTACTCTaGCTGACGCTCTGCCACAAC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFLSVL*LTLCHN
Trigger: GTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCCAGCAGGTTACCATaGACTTCATCCTCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSSRLP*TSSSSP
Trigger: TGGCGAAGAGGATGAAGTCAATGGTAACCTGCTGGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTACAACGGGAACCTGCTaGGTTGTCTCTTTTATCCAT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTTTGTC*VVSFIH
Trigger: ATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTGT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTAACCACTGCATCATaGCACTGGACTCTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLTTAS*HWTLPE
Trigger: CTCAGGAAGAGTCCAGTGCAATGATGCAGTGGTTAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCCATGGTCAACTGGTaGAGCTCTTGCCACTTAGTG +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSMVNW*SSCHLV
Trigger: CACTAAGTGGCAAGAGCTCAACCAGTTGACCATGGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTCTTCCAGCTTTTGTaGCCTGTCCATGGTCAACTG +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLFQLL*PVHGQL
Trigger: CAGTTGACCATGGACAGGCAACAAAAGCTGGAAGAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGTGTGTTCAACATGTTaGGGTCAATGGACAAGGGGC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLVCSTC*GQWTRG
Trigger: GCCCCTTGTCCATTGACCCAAACATGTTGAACACAC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGGTCACAGCTTCCAGTaGCTCGTTCACAATCCCATG +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSGHSFQ*LVHNPM
Trigger: CATGGGATTGTGAACGAGCAACTGGAAGCTGTGACC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAACGCTGAGCAGGCTATaGGCTGTGTTGTTCAGTAGT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLTLSRL*AVLFSS
Trigger: ACTACTGAACAACACAGCCAATAGCCTGCTCAGCGT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACCTCTAGCTGTTCTTTaGTATCCTGAAGCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVPLAVL*YPEAAF
Trigger: AAAGGCAGCTTCAGGATACAAAAGAACAGCTAGAGG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCCTCTAGCTGTTCTTTaGTATCCTGAAGCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTPLAVL*YPEAAF
Trigger: AAAGGCAGCTTCAGGATACAAAAGAACAGCTAGAGG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCATCAGAGGTTCCCTTaGAGTCTGCGGCTTCTACCA +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSHQRFP*SLRLLP
Trigger: TGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGATG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACATCAAGCTGCTGGTaGATTGTCTCGGTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVTSSCW*IVSVSV
Trigger: TACAGAAACCGAGACAATCAACCAGCAGCTTGATGT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTATGGGCTCCGAGTTaGCCAGCTTCTTTTCTACAG +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLWAPS*PASFLQ
Trigger: CTGTAGAAAAGAAGCTGGCAAACTCGGAGCCCATAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGCAGAGGTCTGGTCTaGCTCAAGTCTGATGTCACC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSRGLV*LKSDVT
Trigger: GGTGACATCAGACTTGAGCAAGACCAGACCTCTGCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCCAGCTTTTTCTTCATaGACTGCTTCTCCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTPAFSS*TASPLH
Trigger: GTGAAGAGGAGAAGCAGTCAATGAAGAAAAAGCTGG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGCTGTGGCCCAGTCTaGTTCATCTTATCTATGTGT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSCGPV*FILSMC
Trigger: ACACATAGATAAGATGAACAAGACTGGGCCACAGCT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTATAAATGCCTTCCTTaGGGCTCAGTTCCAATAGCT +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDYKCLP*GSVPIA
Trigger: AGCTATTGGAACTGAGCCCAAAGGAAGGCATTTATA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAGACATCTTCTTTAATTaGACTGTAGAGGGTGTCGGC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVDIFFN*TVEGVG
Trigger: GCCGACACCCTCTACAGTCAAATTAAAGAAGATGTC...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACATCTTCTTTAATTaGACTGTAGAGGGTGTCGGC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTDIFFN*TVEGVG
Trigger: GCCGACACCCTCTACAGTCAAATTAAAGAAGATGTC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTATCACATCCAGCAGTTaGGCTTCCCGTTCTTCGACC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSITSSS*ASRSST
Trigger: GGTCGAAGAACGGGAAGCCAAACTGCTGGATGTGAT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGTCCCGGATGAAATCTaGAGTGTCTTTGATGGTAAC +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTVPDEI*SVFDGN
Trigger: GTTACCATCAAAGACACTCAAGATTTCATCCGGGAC...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTCTTGACAATGGGTTaGTCAGGCTCCCCACATGCA +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLFLTMG*SGSPHA
Trigger: TGCATGTGGGGAGCCTGACAAACCCATTGTCAAGAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTCTTGACAATGGGTTaGTCAGGCTCCCCACATGCA +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFLTMG*SGSPHA
Trigger: TGCATGTGGGGAGCCTGACAAACCCATTGTCAAGAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATCTTCAATCTGCTGCTaGACGGTCTCCAGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLSSICC*TVSRSV
Trigger: AACAGACCTGGAGACCGTCAAGCAGCAGATTGAAGA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCTTCAATCTGCTGCTaGACGGTCTCCAGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSSICC*TVSRSV
Trigger: AACAGACCTGGAGACCGTCAAGCAGCAGATTGAAGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTGAGAATTCTGAGCTaGTACTGGAGGTTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLRILS*YWRLLA
Trigger: AGCAAGCAACCTCCAGTACAAGCTCAGAATTCTCAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGTCCGTCAGCCACTGTaGCAAATCTTCGATTTCACC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLVRQPL*QIFDFT
Trigger: GGTGAAATCGAAGATTTGCAACAGTGGCTGACGGAC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTATGTCTTGGTCAATGTaGGTCTCCGCAGATCGGGGA +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSMSWSM*VSADRG
Trigger: TCCCCGATCTGCGGAGACCAACATTGACCAAGACAT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGCCATTCCATCAGCTaGCTCCACGCTTCATGGAAC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSHSIS*LHASWN
Trigger: GTTCCATGAAGCGTGGAGCAAGCTGATGGAATGGCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTATTTTGTCTGGATCGTaGGCGATTTCCAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTILSGS*AISSSE
Trigger: TTCTGAGCTGGAAATCGCCAACGATCCAGACAAAAT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAATTTTGTCTGGATCGTaGGCGATTTCCAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVILSGS*AISSSE
Trigger: TTCTGAGCTGGAAATCGCCAACGATCCAGACAAAAT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGGACCAGCTGGGCTTaGATTTTGTCTGGATCGTTG +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLWTSWA*ILSGSL
Trigger: CAACGATCCAGACAAAATCAAAGCCCAGCTGGTCCA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACATGAACTCTTTATGTaGCTCAATGAGAGTCCGGAG +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVHELFM*LNESPE
Trigger: CTCCGGACTCTCATTGAGCAACATAAAGAGTTCATG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCATGAACTCTTTATGTaGCTCAATGAGAGTCCGGAG +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTHELFM*LNESPE
Trigger: CTCCGGACTCTCATTGAGCAACATAAAGAGTTCATG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTAACCCTGGGGTTCTaGGTCTCGATTTGCGTCTGT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLTLGF*VSICVC
Trigger: ACAGACGCAAATCGAGACCAAGAACCCCAGGGTTAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTACCTCGTCCTCAATTTaGTCAGCATCCGTGATGGGT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLTSSSI*SASVMG
Trigger: ACCCATCACGGATGCTGACAAAATTGAGGACGAGGT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGGGATTTTAGAAGGCTaGGCTGTGGATGGCCGAGAA +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSGILEG*AVDGRE
Trigger: TTCTCGGCCATCCACAGCCAAGCCTTCTAAAATCCC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGAAGACTTGTCTAATTaGCTGGCAGGTGACCTCCTC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLEDLSN*LAGDLL
Trigger: GAGGAGGTCACCTGCCAGCAAATTAGACAAGTCTTC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TACAAGAAATTAACAGCGCTTCGAGTTGGTGACACAGTTCCTAGGCTGCACATTGTTTCTGCGCACTCATaGCTTTTCTCCAGCTCTTTA +
Preference number: 5 (lower is better)
Translates to: YKKLTALRVGDTVPRLHIVSAHS*LFSSSL
Trigger: TAAAGAGCTGGAGAAAAGCAATGAGTGCGCAGAAAC...AATGTGCAGCCTAGGAACTGTGTCACCAACTCGAAGCGCTGTTAATTTCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp AAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGCAGAGGCTGTGCAAATCCTTCTaGGGAACTACCTTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: KVSTKVKVNSDEHFAMQRLCKSF*GTTLLR
Trigger: TCTGAGCAAGGTAGTTCCCAAGAAGGATTTGCACAG...CCTCTGCATAGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCCTGGACTGACAGCTaGCTCAGTTTGCCATGTACT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSWTDS*LSLPCT
Trigger: AGTACATGGCAAACTGAGCAAGCTGTCAGTCCAGGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS TCA 90 bp AGGAGACGACACTCTTCATGTTTATGTGAGACTCATGCCAGAGAGTaGGTACACTCTGATACTGTTGCTCAATTCTGTTGGCAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: RRRHSSCLCETHARE*VHSDTVAQFCWQSQ
Trigger: TTGACTTTGCCAACAGAATTGAGCAACAGTATCAGAGTGTACTCACTCTCTGGCATGAGTCTCACATAAACATGAAGAGTGTCGTCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 90 bp ACTTCATTTGGCAACTCAGACAAGATAGCTCTTCTAATTAAGTTCTaGATTGAAATTTTCGTCCCTGTGCCAGCCGAAGGGTCTCCCACT +
Preference number: 5 (lower is better)
Translates to: TSFGNSDKIALLIKF*IEIFVPVPAEGSPT
Trigger: AGTGGGAGACCCTTCGGCTGGCACAGGGACGAAAATTTCAATTCAGAACTTAATTAGAAGAGCTATCTTGTCTGAGTTGCCAAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp ATCTTCACCTCGTTCAGTTTCTGCTCAATCAAAGCTCTATCCGCTTaGGACAACTCGTCACCGCTCTCTTTTAAAAAGAGTTCTGTGTTT +
Preference number: 5 (lower is better)
Translates to: IFTSFSFCSIKALSA*DNSSPLSFKKSSVF
Trigger: AAACACAGAACTCTTTTTAAAAGAGAGCGGTGACGAGTTGTCCCAAGCGGATAGAGCTTTGATTGAGCAGAAACTGAACGAGGTGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 90 bp TTCACATCTTGCTGCTTCACCTGCAAGGGTTCGATTTCTTCTTTCTaGAATACCTTAAACACATCAAGCTGCTGGTTGATTGTCTCGGTT +
Preference number: 5 (lower is better)
Translates to: FTSCCFTCKGSISSF*NTLNTSSCWLIVSV
Trigger: AACCGAGACAATCAACCAGCAGCTTGATGTGTTTAAGGTATTCCAGAAAGAAGAAATCGAACCCTTGCAGGTGAAGCAGCAAGATGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACAAGCATGCTCTAAATTaGCAAGGTTGCTTTGAACAG +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDKHALN*QGCFEQ
Trigger: CTGTTCAAAGCAACCTTGCAAATTTAGAGCATGCTT...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACCCGACTCTAATCTTTaGGAATCAGACTGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLPDSNL*ESDWRA
Trigger: TGCTCTCCAGTCTGATTCCAAAAGATTAGAGTCGGG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCCCGACTCTAATCTTTaGGAATCAGACTGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLPDSNL*ESDWRA
Trigger: TGCTCTCCAGTCTGATTCCAAAAGATTAGAGTCGGG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGCAGAGGCGTTCTTTGTGTGTCTaGAACATCTCATCGCTGATG +
Preference number: 5 (lower is better)
Translates to: KVSTKVKVNSDEHFAMQRRSLCV*NISSLM
Trigger: CATCAGCGATGAGATGTTCAAGACACACAAAGAACG...CCTCTGCATAGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTCTTCCAGCTGCCTTaGCAGATTTTTGGGGTCCAA +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLFQLP*QIFGVQ
Trigger: TTGGACCCCAAAAATCTGCAAAGGCAGCTGGAAGAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACAGCAACCTGCTGACTaGATATCTGTCCTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLQQPAD*ISVLAK
Trigger: CTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCTG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCAAACTGCTCTACTTaGGCCTTTAGCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSNCST*AFSSTI
Trigger: GATGGTGGAGCTAAAGGCCAAAGTAGAGCAGTTTGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTAACCACTGCATCATaGCACTGGACTCTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLTTAS*HWTLPE
Trigger: CTCAGGAAGAGTCCAGTGCAATGATGCAGTGGTTAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTCTTCCAGCTTTTGTaGCCTGTCCATGGTCAACTG +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLFQLL*PVHGQL
Trigger: CAGTTGACCATGGACAGGCAACAAAAGCTGGAAGAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAACTGGGTTAGATTATaGGAGGACTCTTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTNWVRL*EDSSSF
Trigger: AAAGCTGGAAGAGTCCTCCAATAATCTAACCCAGTT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGTGTGTTCAACATGTTaGGGTCAATGGACAAGGGGC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSVCSTC*GQWTRG
Trigger: GCCCCTTGTCCATTGACCCAAACATGTTGAACACAC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGGTACTGTGTGCTTTaGACGATAGCCTGGTCAATC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLWYCVL*TIAWSI
Trigger: GATTGACCAGGCTATCGTCAAAAGCACACAGTACCA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGTCTTCCAGAAGTCTTaGCAGAAGCTTCTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLVFQKS*QKLLFL
Trigger: CAGGAACAGAAGCTTCTGCAAAGACTTCTGGAAGAC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTATGGGCTCCGAGTTaGCCAGCTTCTTTTCTACAG +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLWAPS*PASFLQ
Trigger: CTGTAGAAAAGAAGCTGGCAAACTCGGAGCCCATAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGATCATTTCCTGCTTaGTTGACGGCTTCTACCGTG +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLRSFPA*LTASTV
Trigger: CACGGTAGAAGCCGTCAACAAAGCAGGAAATGATCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGCTTGTACTGGAGGTaGCTTGCTTCTTCGCCTTCA +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSLYWR*LASSPS
Trigger: TGAAGGCGAAGAAGCAAGCAACCTCCAGTACAAGCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTCTTCTCGTTGAGTTaGCTCTTCACGGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLFFSLS*LFTDSH
Trigger: GTGGGAATCCGTGAAGAGCAAACTCAACGAGAAGAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTTGTTTTCTTCTCGTaGAGTTTGCTCTTCACGGAT +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDFVFFS*SLLFTD
Trigger: ATCCGTGAAGAGCAAACTCAACGAGAAGAAAACAAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACCTTGTGCTCATCAATTaGAAACAAGATGGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDLVLIN*KQDGVQ
Trigger: TTGGACACCATCTTGTTTCAAATTGATGAGCACAAG...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAGGTGGGTTCCAGTCTaGTCCAACTCTATTATCTGC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLRWVPV*SNSIIC
Trigger: GCAGATAATAGAGTTGGACAAGACTGGAACCCACCT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCAGATGGTGTCCCATTaGTCCCTAAGTTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSQMVSH*SLSSLS
Trigger: GCTGAGTGAACTTAGGGACAAATGGGACACCATCTG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTCCTCCAATTTGTTTaGTCTTTCCACAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDFLQFV*SFHRLS
Trigger: GGAAAGTCTGTGGAAAGACAAAACAAATTGGAGGAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAGAGCTTCCTCCAATTaGTTTTGTCTTTCCACAGAC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVRASSN*FCLSTD
Trigger: GTCTGTGGAAAGACAAAACAAATTGGAGGAAGCTCT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTAACCCTGGGGTTCTaGGTCTCGATTTGCGTCTGT +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLTLGF*VSICVC
Trigger: ACAGACGCAAATCGAGACCAAGAACCCCAGGGTTAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTATGTCGAAATCGAAGTaGGCAAATTCCCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLMSKSK*ANSLSS
Trigger: GGAGCTGAGGGAATTTGCCAACTTCGATTTCGACAT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTGAAGACTTGTCTAATTaGCTGGCAGGTGACCTCCTC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSEDLSN*LAGDLL
Trigger: GAGGAGGTCACCTGCCAGCAAATTAGACAAGTCTTC...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATATCTCTTCGAAGACTaGTCTAATTTGCTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVYLFED*SNLLAG
Trigger: ACCTGCCAGCAAATTAGACAAGTCTTCGAAGAGATA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACAGGGAGTTGACATTTaGCTGTTTGCCAACCATGGT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLQGVDI*LFANHG
Trigger: ACCATGGTTGGCAAACAGCAAAATGTCAACTCCCTG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATGCAGAGGTTCCACGTTCCTCTGTaGCTTCCTCAGTTCATTTTC +
Preference number: 5 (lower is better)
Translates to: KVSTKVKVNSDEHFAMQRFHVPL*LPQFIF
Trigger: GAAAATGAACTGAGGAAGCAACAGAGGAACGTGGAA...CCTCTGCATAGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 90 bp TCTATAAATGTCTTCACCTTTTCGTTCATGGCATTTATGCTGCTTTaGCGACCCGTAATATCCTGCTCCAGCATGGTGTCTTTACTGATG +
Preference number: 5 (lower is better)
Translates to: SINVFTFSFMAFMLL*RPVISCSSMVSLLM
Trigger: CATCAGTAAAGACACCATGCTGGAGCAGGATATTACGGGTCGTCAAAGCAGCATAAATGCCATGAACGAAAAGGTGAAGACATTTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAAAGCATGCTCTAAATTaGCAAGGTTGCTTTGAACAG +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVKHALN*QGCFEQ
Trigger: CTGTTCAAAGCAACCTTGCAAATTTAGAGCATGCTT...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTATTTCTCCATCTCCTTaGGTGGGATTTCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTISPSP*VGFLSL
Trigger: AAGAGAAAGAAATCCCACCAAAGGAGATGGAGAAAT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAAGTCAACTGCTTCTTaGTTTGGTGGGGGAACAGTA +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLKSTAS*FGGGTV
Trigger: TACTGTTCCCCCACCAAACAAAGAAGCAGTTGACTT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATACACTCTGATACTGTaGCTCAATTCTGTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVYTLIL*LNSVGK
Trigger: TTTGCCAACAGAATTGAGCAACAGTATCAGAGTGTA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAATACACAGATTCCTCTaGCTCCTCTCTTTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLIHRFL*LLSFCR
Trigger: TCTGCAGAAAGAGAGGAGCAAGAGGAATCTGTGTAT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTTCTCAATGTTATTCTaGTCTGCTATAACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDFSMLF*SAITAS
Trigger: GGAAGCAGTTATAGCAGACAAGAATAACATTGAGAA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCGTTCTTTGTGTGTCTaGAACATCTCATCGCTGATG +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLRSLCV*NISSLM
Trigger: CATCAGCGATGAGATGTTCAAGACACACAAAGAACG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACCTGTAGGTCATTGTTaGCAACTCATAGTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLPVGHC*QLIVLD
Trigger: GTCAAGGACTATGAGTTGCAAACAATGACCTACAGG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGAACCACCCTCTTCTaGCCTGTAATCATGAACTGT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLRTTLF*PVIMNC
Trigger: ACAGTTCATGATTACAGGCAAGAAGAGGGTGGTTCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCAGAACGGACAATGTaGTCAGAAGATGGGCTGATT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSERTM*SEDGLI
Trigger: AATCAGCCCATCTTCTGACAACATTGTCCGTTCTGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTACCAGCTTATCGCTTaGGCCATCTCTACCTTTAAC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLYQLIA*AISTFN
Trigger: GTTAAAGGTAGAGATGGCCAAAGCGATAAGCTGGTA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTATGATGTTCTCTTTCTaGGGGCTTCAGAGACAAGGC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSMMFSF*GLQRQG
Trigger: GCCTTGTCTCTGAAGCCCCAAGAAAGAGAACATCAT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTCAGAAGACCTTTCTTTaGATCCAGATGTACTTTCTG +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTQKTFL*IQMYFL
Trigger: CAGAAAGTACATCTGGATCAAAAGAAAGGTCTTCTG...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGCTGGGAGACAGATCTaGTGCATAATCAGAGATGAA +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLAGRQI*CIIRDE
Trigger: TTCATCTCTGATTATGCACAAGATCTGTCTCCCAGC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTTTCTATCTTGGTTTaGCTCTCTTCCAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFSILV*LSSSCL
Trigger: GAGGCAGCTGGAAGAGAGCAAAACCAAGATAGAAAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGTCTTCCTCAACATTaGACAGCCAGTTCAAAAGAT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTSLPQH*TASSKD
Trigger: ATCTTTTGAACTGGCTGTCAAATGTTGAGGAAGACT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTACAACGGGAACCTGCTaGGTTGTCTCTTTTATCCAT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLTTGTC*VVSFIH
Trigger: ATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTGT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTAGAAATCCTGAGTATTaGTGTCTGTTCCTTCACCAT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTRNPEY*CLFLHH
Trigger: ATGGTGAAGGAACAGACACAAATACTCAGGATTTCT...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCTCTTCCTGAGCCTTTaGCAATTTGGAGAGCTTAGT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLFLSL*QFGELS
Trigger: ACTAAGCTCTCCAAATTGCAAAAGGCTCAGGAAGAG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTCTTCCTGAGCCTTTaGCAATTTGGAGAGCTTAGT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLFLSL*QFGELS
Trigger: ACTAAGCTCTCCAAATTGCAAAAGGCTCAGGAAGAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTGGTACTGTGTGCTTTaGACGATAGCCTGGTCAATC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSWYCVL*TIAWSI
Trigger: GATTGACCAGGCTATCGTCAAAAGCACACAGTACCA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGCTCAGTGAAAGTTTaGCCAAAGTCTTTCTGCGAG +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCSVKV*PKSFCE
Trigger: CTCGCAGAAAGACTTTGGCAAAACTTTCACTGAGCA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAACATCAAGCTGCTGGTaGATTGTCTCGGTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLTSSCW*IVSVSV
Trigger: TACAGAAACCGAGACAATCAACCAGCAGCTTGATGT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCCACTAAGGCTTTGTaGCTCCTGACTTCGTTTTTC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSTKAL*LLTSFF
Trigger: GAAAAACGAAGTCAGGAGCAACAAAGCCTTAGTGGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTCCAGCTTTTTCTTCATaGACTGCTTCTCCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLPAFSS*TASPLH
Trigger: GTGAAGAGGAGAAGCAGTCAATGAAGAAAAAGCTGG...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAGCTGTGGCCCAGTCTaGTTCATCTTATCTATGTGT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSCGPV*FILSMC
Trigger: ACACATAGATAAGATGAACAAGACTGGGCCACAGCT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTGACTGCCACATACTTTTCTaGGATATAAATGCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SAVVVRENVDLPVGTVTDCHILF*DINAFL
Trigger: AAGGAAGGCATTTATATCCAAGAAAAGTATGTGGCA...GTCAGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGTCCCGGATGAAATCTaGAGTGTCTTTGATGGTAAC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLVPDEI*SVFDGN
Trigger: GTTACCATCAAAGACACTCAAGATTTCATCCGGGAC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGATCATTTCCTGCTTaGTTGACGGCTTCTACCGTG +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSRSFPA*LTASTV
Trigger: CACGGTAGAAGCCGTCAACAAAGCAGGAAATGATCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTGAGAATTCTGAGCTaGTACTGGAGGTTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLRILS*YWRLLA
Trigger: AGCAAGCAACCTCCAGTACAAGCTCAGAATTCTCAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCTCGTTGAGTTaGCTCTTCACGGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSFFSLS*LFTDSH
Trigger: GTGGGAATCCGTGAAGAGCAAACTCAACGAGAAGAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTTGTTTTCTTCTCGTaGAGTTTGCTCTTCACGGAT +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVFVFFS*SLLFTD
Trigger: ATCCGTGAAGAGCAAACTCAACGAGAAGAAAACAAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGGTGGGTTCCAGTCTaGTCCAACTCTATTATCTGC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSRWVPV*SNSIIC
Trigger: GCAGATAATAGAGTTGGACAAGACTGGAACCCACCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGTTCACTCAGCATGTaGTCCAGCTTCAGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSSLSM*SSFRLS
Trigger: TGACAACCTGAAGCTGGACAACATGCTGAGTGAACT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTCCTCCAATTTGTTTaGTCTTTCCACAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVFLQFV*SFHRLS
Trigger: GGAAAGTCTGTGGAAAGACAAAACAAATTGGAGGAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTATGTCGAAATCGAAGTaGGCAAATTCCCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSMSKSK*ANSLSS
Trigger: GGAGCTGAGGGAATTTGCCAACTTCGATTTCGACAT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTGACATTTTGCTGTTaGCCAACCATGGTTTACCAT +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVLTFCC*PTMVYH
Trigger: ATGGTAAACCATGGTTGGCAAACAGCAAAATGTCAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTTATTTCCAAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTAGCTTTGTCTGTTGTTaGGTTCAGCTGCCTGCCAAG +
Preference number: 5 (lower is better)
Translates to: FISKVSTKVKVNSDEHFASFVCC*VQLPAK
Trigger: CTTGGCAGGCAGCTGAACCAAACAACAGACAAAGCT...AGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTTGGAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp CAGCAGATGTCTTTGAGGACGGGAAAAGCTTTTATGATCAGTCTGGGATCACTGCTCTGCATCATCAATTaGGTTTCATTATTCTGCCTA +
Preference number: 5 (lower is better)
Translates to: QQMSLRTGKAFMISLGSLLCIIN*VSLFCL
Trigger: TAGGCAGAATAATGAAACCAAATTGATGATGCAGAG...CAGTGATCCCAGACTGATCATAAAAGCTTTTCCCGTCCTCAAAGACATCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTCATCTTCTAAGACCTaGTGCTGTGAAATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLSSSKT*CCEICS
Trigger: GGAGCAGATTTCACAGCACAAGGTCTTAGAAGATGA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185269.7
CDS TCA 90 bp TCGACTCTCCTGAGGGTTGTAATTCTTGTTGTTTCAGAGATTCACTaGATAATAAATTGTAGCCCTCCTGCAGGGTTTTCACCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: STLLRVVILVVSEIH*IINCSPPAGFSPVS
Trigger: AGAAACAGGTGAAAACCCTGCAGGAGGGCTACAATTTATTATTCAGTGAATCTCTGAAACAACAAGAATTACAACCCTCAGGAGAGTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000185897.7
CDS TCA 90 bp TTGTTCATCTTCTCTAACCACTGCATCATTGCACTGGACTCTTCCTaGGCCTTTTGCAATTTGGAGAGCTTAGTGTTCAGTTCAACTATT +
Preference number: 5 (lower is better)
Translates to: LFIFSNHCIIALDSS*AFCNLESLVFSSTI
Trigger: AATAGTTGAACTGAACACTAAGCTCTCCAAATTGCAAAAGGCTCAGGAAGAGTCCAGTGCAATGATGCAGTGGTTAGAGAAGATGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 90 bp TTGGTGATGTCTTTGTACCTGGCTTTAATGGCTTCCAACTTATCTTaGATGATTAAGACTTCATCACCTGTGGTCTGTTTGAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LVMSLYLALMASNLS*MIKTSSPVVCLSSS
Trigger: AGAGCTGCTCAAACAGACCACAGGTGATGAAGTCTTAATCATTCAAGATAAGTTGGAAGCCATTAAAGCCAGGTACAAAGACATCACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 90 bp CTCCCATTCAGAATTTTGGAGGCTAATTCATTTGTAATCAACTCTTaGTGTAAGGAAGATGATGTGGGAAATATTTCACCAGAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: LPFRILEANSFVINS*CKEDDVGNISPEWG
Trigger: GCCCCACTCTGGTGAAATATTTCCCACATCATCTTCCTTACAGCAAGAGTTGATTACAAATGAATTAGCCTCCAAAATTCTGAATGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 90 bp CACTGTTCTTTACAAGTTCAGTATCTTGGACATTCACAGTTTGAATaGCCTTCACAGATCTGCTTTTCTCTGACACCCAATCTGAATAGG +
Preference number: 5 (lower is better)
Translates to: HCSLQVQYLGHSQFE*PSQICFSLTPNLNR
Trigger: CCTATTCAGATTGGGTGTCAGAGAAAAGCAGATCTGTGAAGGCCATTCAAACTGTGAATGTCCAAGATACTGAACTTGTAAAGAACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAAGTCAACTGCTTCTTaGTTTGGTGGGGGAACAGTA +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSKSTAS*FGGGTV
Trigger: TACTGTTCCCCCACCAAACAAAGAAGCAGTTGACTT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTGTTGCTCAATTCTGTaGGCAAAGTCAACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLCCSIL*AKSTAS
Trigger: AGAAGCAGTTGACTTTGCCAACAGAATTGAGCAACA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGTTGCTCAATTCTGTaGGCAAAGTCAACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLCCSIL*AKSTAS
Trigger: AGAAGCAGTTGACTTTGCCAACAGAATTGAGCAACA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTATTCTCAATGTTATTCTaGTCTGCTATAACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVFSMLF*SAITAS
Trigger: GGAAGCAGTTATAGCAGACAAGAATAACATTGAGAA...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCGTTCTTTGTGTGTCTaGAACATCTCATCGCTGATG +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSRSLCV*NISSLM
Trigger: CATCAGCGATGAGATGTTCAAGACACACAAAGAACG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCCTGTAGGTCATTGTTaGCAACTCATAGTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSPVGHC*QLIVLD
Trigger: GTCAAGGACTATGAGTTGCAAACAATGACCTACAGG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTTAGACATTTCAGAGTaGATTGCAAGCTTGATCAGT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTLDISE*IASLIS
Trigger: ACTGATCAAGCTTGCAATCAACTCTGAAATGTCTAA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGAAAACCCTTCTGGGTaGTATTTAAGAGTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLENPSG*YLRVSA
Trigger: TGCTGAGACTCTTAAATACAACCCAGAAGGGTTTTC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTACAACGGGAACCTGCTaGGTTGTCTCTTTTATCCAT +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSTTGTC*VVSFIH
Trigger: ATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTGT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAGACACCACTGTTGTTaGCTTTGTGAATTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLRHHCC*LCEFLV
Trigger: CACCAGAAATTCACAAAGCAAACAACAGTGGTGTCT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp CTATGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTACACTTTGTTTACATTTaGCTTCAGTTCTGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: LCSAVVVRENVDLPVGTVHFVYI*LQFCLK
Trigger: TTTGAGGCAGAACTGAAGCAAAATGTAAACAAAGTG...TACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAAACTGGGTTAGATTATaGGAGGACTCTTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLNWVRL*EDSSSF
Trigger: AAAGCTGGAAGAGTCCTCCAATAATCTAACCCAGTT...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTAACTGGGTTAGATTATaGGAGGACTCTTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLNWVRL*EDSSSF
Trigger: AAAGCTGGAAGAGTCCTCCAATAATCTAACCCAGTT...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTACATCAAGCTGCTGGTaGATTGTCTCGGTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSTSSCW*IVSVSV
Trigger: TACAGAAACCGAGACAATCAACCAGCAGCTTGATGT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTCCACTAAGGCTTTGTaGCTCCTGACTTCGTTTTTC +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSTKAL*LLTSFF
Trigger: GAAAAACGAAGTCAGGAGCAACAAAGCCTTAGTGGA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTACTTCTTCAGTACCTaGTCCAGCTTTTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTYFFST*SSFFFI
Trigger: AATGAAGAAAAAGCTGGACAAGGTACTGAAGAAGTA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TGTAGTGCTGTGGTTGTCAGAGAGAATGTGGACTTACCTGTAGGTACAGTAACTTGCCACATACTTTTCTaGGATATAAATGCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: CSAVVVRENVDLPVGTVTCHILF*DINAFL
Trigger: AAGGAAGGCATTTATATCCAAGAAAAGTATGTGGCA...AGTTACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTGAGAATTCTGAGCTaGTACTGGAGGTTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLRILS*YWRLLA
Trigger: AGCAAGCAACCTCCAGTACAAGCTCAGAATTCTCAA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTATTTTGTCTGGATCGTaGGCGATTTCCAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSILSGS*AISSSE
Trigger: TTCTGAGCTGGAAATCGCCAACGATCCAGACAAAAT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTATCTCTTCGAAGACTaGTCTAATTTGCTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLYLFED*SNLLAG
Trigger: ACCTGCCAGCAAATTAGACAAGTCTTCGAAGAGATA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTCTGCTTTACAGGGAGTaGACATTTTGCTGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSLLYRE*TFCCLP
Trigger: TGGCAAACAGCAAAATGTCAACTCCCTGTAAAGCAG...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp AGTGTTTATAGCAATGCTTGTTATAAACTCACTGTCACTTCATTGTTAACGGCACAGCACCGAGCCCCCTaGAATCTTTCTTTTGGATCT +
Preference number: 5 (lower is better)
Translates to: SVYSNACYKLTVTSLLTAQHRAP*NLSFGS
Trigger: AGATCCAAAAGAAAGATTCAAGGGGGCTCGGTGCTG...TGCCGTTAACAATGAAGTGACAGTGAGTTTATAACAAGCATTGCTATAAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
CDS TCA 90 bp TTCACACTGTTCTTTACAAGTTCAGTATCTTGGACATTCACAGTTTaGATGGCCTTCACAGATCTGCTTTTCTCTGACACCCAATCTGAA +
Preference number: 5 (lower is better)
Translates to: FTLFFTSSVSWTFTV*MAFTDLLFSDTQSE
Trigger: TTCAGATTGGGTGTCAGAGAAAAGCAGATCTGTGAAGGCCATTCAAACTGTGAATGTCCAAGATACTGAACTTGTAAAGAACAGTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS TCA 90 bp GCACTCAGCAGGTTACATAGTGAGACACCACTGTTGTTTGCTTTGTaGATTTCTGGTGCTTTCAGATTCCACTTTTCTTGTAATTTCTTG +
Preference number: 5 (lower is better)
Translates to: ALSRLHSETPLLFAL*ISGAFRFHFSCNFL
Trigger: CAAGAAATTACAAGAAAAGTGGAATCTGAAAGCACCAGAAATTCACAAAGCAAACAACAGTGGTGTCTCACTATGTAACCTGCTGAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp ATGGATGACATCATTAATGTGTTGAATCTATTCAGTGAAAGGACTATGAAGGAGCTCGATGAGAGTTGTTaGCCAAGACACACTCATCGT +
Preference number: 5 (lower is better)
Translates to: MDDIINVLNLFSERTMKELDESC*PRHTHR
Trigger: ACGATGAGTGTGTCTTGGCAAACAACTCTCATCGAG...CTCCTTCATAGTCCTTTCACTGAATAGATTCAACACATTAATGATGTCATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGAGAACTGCTCCTTCTaGGTTGATATTTCTTTACTG +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLENCSF*VDISLL
Trigger: CAGTAAAGAAATATCAACCAAGAAGGAGCAGTTCTC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGAGAACTGCTCCTTCTaGGTTGATATTTCTTTACTG +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLENCSF*VDISLL
Trigger: CAGTAAAGAAATATCAACCAAGAAGGAGCAGTTCTC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGTAACAGGCTCACTTaGACTTTTACAGCCTTTAAG +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLCNRLT*TFTAFK
Trigger: CTTAAAGGCTGTAAAAGTCAAAGTGAGCCTGTTACA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGACACCACTGTTGTTaGCTTTGTGAATTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSRHHCC*LCEFLV
Trigger: CACCAGAAATTCACAAAGCAAACAACAGTGGTGTCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTATAAATGCCTTCCTTaGGGCTCAGTTCCAATAGCT +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSYKCLP*GSVPIA
Trigger: AGCTATTGGAACTGAGCCCAAAGGAAGGCATTTATA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATTTGTTTTCTTCTCGTaGAGTTTGCTCTTCACGGAT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLFVFFS*SLLFTD
Trigger: ATCCGTGAAGAGCAAACTCAACGAGAAGAAAACAAA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTACTTGTGCTCATCAATTaGAAACAAGATGGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLLVLIN*KQDGVQ
Trigger: TTGGACACCATCTTGTTTCAAATTGATGAGCACAAG...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTAGATGAGCACGACATCTaGTTTCTGACTGAAATACTT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLDEHDI*FLTEIL
Trigger: AAGTATTTCAGTCAGAAACAAGATGTCGTGCTCATC...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTGATGAGCACGACATCTaGTTTCTGACTGAAATACTT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLDEHDI*FLTEIL
Trigger: AAGTATTTCAGTCAGAAACAAGATGTCGTGCTCATC...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTCCTCCAATTTGTTTaGTCTTTCCACAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLFLQFV*SFHRLS
Trigger: GGAAAGTCTGTGGAAAGACAAAACAAATTGGAGGAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTATCTCTTCGAAGACTaGTCTAATTTGCTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSYLFED*SNLLAG
Trigger: ACCTGCCAGCAAATTAGACAAGTCTTCGAAGAGATA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTTGACATTTTGCTGTTaGCCAACCATGGTTTACCAT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLLTFCC*PTMVYH
Trigger: ATGGTAAACCATGGTTGGCAAACAGCAAAATGTCAA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS GCA 90 bp AGCTCTGATAGTTTGTCTTTTAATTCTTGCACTTTGTTTACATTTTaGTTCAGTTCTGCCTCAAATGACTTGTTCTGCTCCACCTGCAAC +
Preference number: 5 (lower is better)
Translates to: SSDSLSFNSCTLFTF*FSSASNDLFCSTCN
Trigger: GTTGCAGGTGGAGCAGAACAAGTCATTTGAGGCAGAACTGAAGCAAAATGTAAACAAAGTGCAAGAATTAAAAGACAAACTATCAGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTACACTCTGATACTGTaGCTCAATTCTGTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSYTLIL*LNSVGK
Trigger: TTTGCCAACAGAATTGAGCAACAGTATCAGAGTGTA...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGTCTTCCTCAACATTaGACAGCCAGTTCAAAAGAT +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSSLPQH*TASSKD
Trigger: ATCTTTTGAACTGGCTGTCAAATGTTGAGGAAGACT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTAGTGTATGGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTAGAAATCCTGAGTATTaGTGTCTGTTCCTTCACCAT +
Preference number: 5 (lower is better)
Translates to: LVYGLHSTVQKHQFMLSSRNPEY*CLFLHH
Trigger: ATGGTGAAGGAACAGACACAAATACTCAGGATTTCT...AGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp GGTCTACACTCGACAGTGCAGAAACATCAGTTCATGTTAAGTTCTTTCTTCCTTTACTTCTTCAGTACCTaGTCCAGCTTTTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: GLHSTVQKHQFMLSSFFLYFFST*SSFFFI
Trigger: AATGAAGAAAAAGCTGGACAAGGTACTGAAGAAGTA...AAGGAAGAAAGAACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATACTTCTTCAGTACCTaGTCCAGCTTTTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLYFFST*SSFFFI
Trigger: AATGAAGAAAAAGCTGGACAAGGTACTGAAGAAGTA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp TTGGTTTGTCAGCTGTTCAGAATCTCCATAAAAGGTGTCATGAGGTATCCCTTATGCCACATACTTTTCTaGGATATAAATGCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: LVCQLFRISIKGVMRYPLCHILF*DINAFL
Trigger: AAGGAAGGCATTTATATCCAAGAAAAGTATGTGGCA...TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000185269.7
CDS-3UTR CAA 90 bp ATGGATGACATCATTAATGTGTTGAATCTATTCAGTGAAAGGACTATGAAGGAGTGCATGCCACACTGTTaGTTCTTAGCTATCTCTAAG +
Preference number: 5 (lower is better)
Translates to: MDDIINVLNLFSERTMKECMPHC*FLAISK
Trigger: CTTAGAGATAGCTAAGAACAAACAGTGTGGCATGCA...CTCCTTCATAGTCCTTTCACTGAATAGATTCAACACATTAATGATGTCATCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TTTATTTCCAAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTTTCTCAATGTTATTCTaGTCTGCTATAACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: FISKVSTKVKVNSDEHFAFSMLF*SAITAS
Trigger: GGAAGCAGTTATAGCAGACAAGAATAACATTGAGAA...AGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTTGGAAATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS-3UTR CAA 90 bp TTTATTTCCAAAGTCTCAACCAAAGTAAAAGTTAACAGCGACGAACACTTCGCTATTTTCTTTCTCGGCTaGAATATTCTGAAGCAACTG +
Preference number: 5 (lower is better)
Translates to: FISKVSTKVKVNSDEHFAIFFLG*NILKQL
Trigger: CAGTTGCTTCAGAATATTCAAGCCGAGAAAGAAAAT...AGCGAAGTGTTCGTCGCTGTTAACTTTTACTTTGGTTGAGACTTTGGAAATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp CCTCCACCGCGGCTCGCCGAGCTTCCGCCTCCGCCGTaGGCTGCCTCACCCGCTCCAGCTCCCGCTCGGCAG +
Preference number: 6 (lower is better)
Translates to: PPPRLAELPPPP*AASPAPAPARQ
Trigger: CTGCCGAGCGGGAGCTGGAGCGGGTGAGGCAGCTCACGGCGGAGGCGGAAGCTCGGCGAGCCGCGGTGGAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp ACCGCGGCTCGCCGAGCTTCCGCCTCCGCCGTGAGCTaGCTCACCCGCTCCAGCTCCCGCTCGGCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: TAARRASASAVS*LTRSSSRSAAS
Trigger: GGAAGCTGCCGAGCGGGAGCTGGAGCGGGTGAGGCAGCTCACGGCGGAGGCGGAAGCTCGGCGAGCCGCGGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp TGTGCCCTTGGGTGTGCTGGCGGCAGCAGGCACCGGTaGGGAGGCTGCCTGGCAGGCATGACTCGACGCGGA +
Preference number: 6 (lower is better)
Translates to: CALGCAGGSRHR*GGCLAGMTRRG
Trigger: TCCGCGTCGAGTCATGCCTGCCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGGGCACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS TCA 72 bp CAAGCCGGGCAGCTGCGGCCGCTGCAACTCGCCTCCTaGTGTGTCGGGGGCTTGCTCGGAACCCCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: QAGQLRPLQLAS*CVGGLLGTPQS
Trigger: GCTCTGAGGGGTTCCGAGCAAGCCCCCGACACATCAGGAGGCGAGTTGCAGCGGCCGCAGCTGCCCGGCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS GCA 72 bp GGGTGTGCTGGCGGCAGCAGGCACCGGTGGGGAGGCTaGCTGGCAGGCATGACTCGACGCGGAAGTGGATCT +
Preference number: 6 (lower is better)
Translates to: GCAGGSRHRWGG*LAGMTRRGSGS
Trigger: AGATCCACTTCCGCGTCGAGTCATGCCTGCCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CCA 72 bp GCTTGCTTCCCTGGATTGGTGTGCCCTTGGGTGTGCTaGCGGCAGCAGGCACCGGTGGGGAGGCTGCCTGGC +
Preference number: 6 (lower is better)
Translates to: ACFPGLVCPWVC*RQQAPVGRLPG
Trigger: GCCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS CAA 90 bp AGGTACCCGGGTAGTCGCAGCTTGCTTCCCTGGATTGGTGTGCCCTaGGGTGTGCTGGCGGCAGCAGGCACCGGTGGGGAGGCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: RYPGSRSLLPWIGVP*GVLAAAGTGGEAAW
Trigger: CCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS GCA 72 bp GCAGCTTGCTTCCCTGGATTGGTGTGCCCTTGGGTGTaGTGGCGGCAGCAGGCACCGGTGGGGAGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: AACFPGLVCPWV*WRQQAPVGRLP
Trigger: AGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS TCA 72 bp CGCGGAAGTGGATCTGTTGGGGGAAGCTCCTCTGGATaGAGGGCGAGATCGGCGGCCTCGCGGTCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: RGSGSVGGSSSG*RARSAASRSEG
Trigger: GCCTTCCGACCGCGAGGCCGCCGATCTCGCCCTTCATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS TCA 72 bp GCAGCAGGCACCGGTGGGGAGGCTGCCTGGCAGGCATaGCTCGACGCGGAAGTGGATCTGTTGGGGGAAGCT +
Preference number: 6 (lower is better)
Translates to: AAGTGGEAAWQA*LDAEVDLLGEA
Trigger: AGCTTCCCCCAACAGATCCACTTCCGCGTCGAGTCATGCCTGCCAGGCAGCCTCCCCACCGGTGCCTGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS GCA 72 bp AGCCCAGCCAGCGCCCCTGCTAACCTCTGCTGGTGCTaGTTCGCCCAGGCCAGCACCTCTTCAAACCTGGCC +
Preference number: 6 (lower is better)
Translates to: SPASAPANLCWC*FAQASTSSNLA
Trigger: GGCCAGGTTTGAAGAGGTGCTGGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGCAGGGGCGCTGGCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp ACCCGGGTAGTCGCAGCTTGCTTCCCTGGATTGGTGTaGCCTTGGGTGTGCTGGCGGCAGCAGGCACCGGTG +
Preference number: 6 (lower is better)
Translates to: TRVVAACFPGLV*PWVCWRQQAPV
Trigger: CACCGGTGCCTGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS CCA 72 bp GTAGTCGCAGCTTGCTTCCCTGGATTGGTGTGCCCTTaGGTGTGCTGGCGGCAGCAGGCACCGGTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: VVAACFPGLVCP*VCWRQQAPVGR
Trigger: CCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS CCA 72 bp CCCTCACGATCGTCTCCAGCTCACGGCGGTACTGCTTaGCCTCGCTCTCGGCCCTCAGCTTCTGCAGGGCGA +
Preference number: 6 (lower is better)
Translates to: PSRSSPAHGGTA*PRSRPSASAGR
Trigger: TCGCCCTGCAGAAGCTGAGGGCCGAGAGCGAGGCCAAGCAGTACCGCCGTGAGCTGGAGACGATCGTGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp GGTAGTCGCAGCTTGCTTCCCTGGATTGGTGTGCCCTaGGGTGTGCTGGCGGCAGCAGGCACCGGTGGGGAG +
Preference number: 6 (lower is better)
Translates to: GSRSLLPWIGVP*GVLAAAGTGGE
Trigger: CTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS CAA 90 bp CTTTCCCTGACAGGTACCCGGGTAGTCGCAGCTTGCTTCCCTGGATaGGTGTGCCCTTGGGTGTGCTGGCGGCAGCAGGCACCGGTGGGG +
Preference number: 6 (lower is better)
Translates to: LSLTGTRVVAACFPG*VCPWVCWRQQAPVG
Trigger: CCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGGGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS GCA 72 bp TTGGCGATGAGCCCAGCCAGCGCCCCTGCTAACCTCTaGTGGTGCTGCTTCGCCCAGGCCAGCACCTCTTCA +
Preference number: 6 (lower is better)
Translates to: LAMSPASAPANL*WCCFAQASTSS
Trigger: TGAAGAGGTGCTGGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGCAGGGGCGCTGGCTGGGCTCATCGCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp GCCACCTGCTTCTGGAAGGCCAGGTCCCGCTCCATCTaGTTCACCAGTCGCAGGAGCTCCTCCTCGTGGTCC +
Preference number: 6 (lower is better)
Translates to: ATCFWKARSRSI*FTSRRSSSSWS
Trigger: GGACCACGAGGAGGAGCTCCTGCGACTGGTGAAGCAGATGGAGCGGGACCTGGCCTTCCAGAAGCAGGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp TCGACGCGGAAGTGGATCTGTTGGGGGAAGCTCCTCTaGATGAAGGGCGAGATCGGCGGCCTCGCGGTCGGA +
Preference number: 6 (lower is better)
Translates to: STRKWICWGKLL*MKGEIGGLAVG
Trigger: TCCGACCGCGAGGCCGCCGATCTCGCCCTTCATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCGCGTCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CAA 90 bp AGGGTCAGCTTGGTACTGGGGCTCTCCACCCTCATCTGCTACTCCTaGTCCTCCTCGCCCGTCTCCACTGTCCTCACTGCTGCGGCCCCC +
Preference number: 6 (lower is better)
Translates to: RVSLVLGLSTLICYS*SSSPVSTVLTAAAP
Trigger: GGGGGCCGCAGCAGTGAGGACAGTGGAGACGGGCGAGGAGGACAAGGAGTAGCAGATGAGGGTGGAGAGCCCCAGTACCAAGCTGACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp AAATGTCAAAGTCGGACGCGTCGCTGCCTCGGCGGCTaGTGGCTCTGCTTCCGGCTTTGCTTCCGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: KCQSRTRRCLGG*WLCFRLCFRLC
Trigger: GCAGAGCCGGAAGCAAAGCCGGAAGCAGAGCCAGCAGCCGCCGAGGCAGCGACGCGTCCGACTTTGACATTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp TTCTCCCTCACGATCGTCTCCAGCTCACGGCGGTACTaGTTGGCCTCGCTCTCGGCCCTCAGCTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: FSLTIVSSSRRY*LASLSALSFCR
Trigger: CCTGCAGAAGCTGAGGGCCGAGAGCGAGGCCAAGCAGTACCGCCGTGAGCTGGAGACGATCGTGAGGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp TTCCACCACAGGCTTCACTTCTTCAAGCCGGGCAGCTaGGGCCGCTGCAACTCGCCTCCTGATGTGTCGGGG +
Preference number: 6 (lower is better)
Translates to: FHHRLHFFKPGS*GRCNSPPDVSG
Trigger: CCCCGACACATCAGGAGGCGAGTTGCAGCGGCCGCAGCTGCCCGGCTTGAAGAAGTGAAGCCTGTGGTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS GCA 72 bp TGGTCACCGTGCTCTGTGGCTGCCCTCTTCCCCAGCTaGACAGCATCTTCCTTAGTGGGGCTTGCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: WSPCSVAALFPS*TASSLVGLAAG
Trigger: CCCTGCCGCAAGCCCCACTAAGGAAGATGCTGTGCAGCTGGGGAAGAGGGCAGCCACAGAGCACGGTGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS CCA 72 bp CTGCTCCTTGATCTTCTCCACCTCGGCGGAGATGGATaGCGGCTGCCGCAGACGCTCCGCAATGCGTTCCAG +
Preference number: 6 (lower is better)
Translates to: LLLDLLHLGGDG*RLPQTLRNAFQ
Trigger: CTGGAACGCATTGCGGAGCGTCTGCGGCAGCCGCCATCCATCTCCGCCGAGGTGGAGAAGATCAAGGAGCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp GGGAGGCTGCCTGGCAGGCATGACTCGACGCGGAAGTaGATCTGTTGGGGGAAGCTCCTCTGGATGAAGGGC +
Preference number: 6 (lower is better)
Translates to: GRLPGRHDSTRK*ICWGKLLWMKG
Trigger: GCCCTTCATCCAGAGGAGCTTCCCCCAACAGATCCACTTCCGCGTCGAGTCATGCCTGCCAGGCAGCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CCA 72 bp CCTGACAGGTACCCGGGTAGTCGCAGCTTGCTTCCCTaGATTGGTGTGCCCTTGGGTGTGCTGGCGGCAGCA +
Preference number: 6 (lower is better)
Translates to: PDRYPGSRSLLP*IGVPLGVLAAA
Trigger: TGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS CAA 72 bp ACAGGTACCCGGGTAGTCGCAGCTTGCTTCCCTGGATaGGTGTGCCCTTGGGTGTGCTGGCGGCAGCAGGCA +
Preference number: 6 (lower is better)
Translates to: TGTRVVAACFPG*VCPWVCWRQQA
Trigger: TGCCTGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS CAA 90 bp GCTTCCTTCTCCCTCACGATCGTCTCCAGCTCACGGCGGTACTGCTaGGCCTCGCTCTCGGCCCTCAGCTTCTGCAGGGCGATGTCTTCC +
Preference number: 6 (lower is better)
Translates to: ASFSLTIVSSSRRYC*ASLSALSFCRAMSS
Trigger: GGAAGACATCGCCCTGCAGAAGCTGAGGGCCGAGAGCGAGGCCAAGCAGTACCGCCGTGAGCTGGAGACGATCGTGAGGGAGAAGGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp CCAGAGTGGAAGCCTTTCCCTGACAGGTACCCGGGTAGTCGCAGCTaGCTTCCCTGGATTGGTGTGCCCTTGGGTGTGCTGGCGGCAGCA +
Preference number: 6 (lower is better)
Translates to: PEWKPFPDRYPGSRS*LPWIGVPLGVLAAA
Trigger: TGCTGCCGCCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGGGAAAGGCTTCCACTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS TCA 72 bp AGCCATGCGAGGAGCTCGTCCAGGGCGTGCTGGAACTaGCCCAGTGCTAAGAGAGCACCCTCGAGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: SHARSSSRACWN*PSAKRAPSSLC
Trigger: GCACAAGCTCGAGGGTGCTCTCTTAGCACTGGGTCAGTTCCAGCACGCCCTGGACGAGCTCCTCGCATGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp CAGACCTCCTGGGCCTCCTTGATCTTCGGTGCCTGCTaGTCGATTTCCTGCTTCAGCCTCTGGGCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: QTSWASLIFGAC*SISCFSLWAAS
Trigger: GGAGGCAGCCCAGAGGCTGAAGCAGGAAATCGAGCAGCAGGCACCGAAGATCAAGGAGGCCCAGGAGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp TTGATCTTCTCCACCTCGGCGGAGATGGATGGCGGCTaGCGCAGACGCTCCGCAATGCGTTCCAGGCTCTCA +
Preference number: 6 (lower is better)
Translates to: LIFSTSAEMDGG*RRRSAMRSRLS
Trigger: TGAGAGCCTGGAACGCATTGCGGAGCGTCTGCGGCAGCCGCCATCCATCTCCGCCGAGGTGGAGAAGATCAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp CCTTCGATGAGTTCCCTGGCAGAGCGCTTCAGGGCCTaGACGCTGCTGGTCCTCTTCCCCAGCTCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: PSMSSLAERFRA*TLLVLFPSSFW
Trigger: CCAGAAAGAGCTGGGGAAGAGGACCAGCAGCGTGCAGGCCCTGAAGCGCTCTGCCAGGGAACTCATCGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp CCTGGACTCAGCGAACTGTGTTCGGACTCTGGCGGCTaGCGTCGTTATCAAGGCGCTGTCCTCCCCAGAGTG +
Preference number: 6 (lower is better)
Translates to: PGLSELCSDSGG*RRYQGAVLPRV
Trigger: CACTCTGGGGAGGACAGCGCCTTGATAACGACGGCAGCCGCCAGAGTCCGAACACAGTTCGCTGAGTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GGGGGCCCGCGGACAGCAGTATCTCAAGCACTCGGATaGCCATGGATTCTGAGACCATGCCCTGAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: GGPRTAVSQALG*PWILRPCPEPE
Trigger: CTCTGGCTCAGGGCATGGTCTCAGAATCCATGGCCATCCGAGTGCTTGAGATACTGCTGTCCGCGGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp CCAAAGCAATGGGCTCCCGTAAATGTTTGCTGGCTTTaGCCTCGCAGGCCTGGAGCCCGGAGAGAAGGCCGC +
Preference number: 6 (lower is better)
Translates to: PKQWAPVNVCWL*PRRPGARREGR
Trigger: GCGGCCTTCTCTCCGGGCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCCCATTGCTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp CCAGCTTCTCGGTGGCTCCATCCACCTGCTCCTCCCTaGTTTTCGCCCGGTCCAGCAGCTTGTTGCACTGCT +
Preference number: 6 (lower is better)
Translates to: PASRWLHPPAPP*FSPGPAACCTA
Trigger: AGCAGTGCAACAAGCTGCTGGACCGGGCGAAAACCAGGGAGGAGCAGGTGGATGGAGCCACCGAGAAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TTCCGGCTTTGCTTCCGGCTCTGCTCCCTGGGCGGCTaGGAGTCTTCCTGGACTCAGCGAACTGTGTTCGGA +
Preference number: 6 (lower is better)
Translates to: FRLCFRLCSLGG*ESSWTQRTVFG
Trigger: TCCGAACACAGTTCGCTGAGTCCAGGAAGACTCCCAGCCGCCCAGGGAGCAGAGCCGGAAGCAAAGCCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GCTGAGCCTTCTGCTCTTCCCGCCGCTTCTCCTCTTTaGACGCGCTCAGTTCTGCGCTCAGGCTCCTCACCT +
Preference number: 6 (lower is better)
Translates to: AEPSALPAASPL*TRSVLRSGSSP
Trigger: AGGTGAGGAGCCTGAGCGCAGAACTGAGCGCGTCCAAAGAGGAGAAGCGGCGGGAAGAGCAGAAGGCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp GCATGGCTGGCTGCTCTCCCTGTCCAGCGGAGCCCCTaGCTGTCGGAACTGAACCTCCTTCGGAAGTTGTTC +
Preference number: 6 (lower is better)
Translates to: AWLAALPVQRSP*LSELNLLRKLF
Trigger: GAACAACTTCCGAAGGAGGTTCAGTTCCGACAGCCAGGGGCTCCGCTGGACAGGGAGAGCAGCCAGCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp ACGGGGTGGCTGATCCCCGTGATCACTAATTCACACTaGCGTAGCTGCTGGGCGAAGCCCTCGTCCACCAGC +
Preference number: 6 (lower is better)
Translates to: TGWLIPVITNSH*RSCWAKPSSTS
Trigger: GCTGGTGGACGAGGGCTTCGCCCAGCAGCTACGCCAGTGTGAATTAGTGATCACGGGGATCAGCCACCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp AGCCGCAGCTGCTCAACTGTCCTCATGTCCAGGAGCTaGGCTTCGACCAGCTGCCTGCCAGTCACGGTGTGC +
Preference number: 6 (lower is better)
Translates to: SRSCSTVLMSRS*ASTSCLPVTVC
Trigger: GCACACCGTGACTGGCAGGCAGCTGGTCGAAGCCAAGCTCCTGGACATGAGGACAGTTGAGCAGCTGCGGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp TTCACGGCATCTGGCAGTGCGCCTGAGGTGAGGCCGCTGCTGAGCTaGTCATCCAGCTCAGTCAGGGTACCCGAGAGACTTCTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: FTASGSAPEVRPLLS*SSSSVRVPERLLSR
Trigger: CCTGCTGAGAAGTCTCTCGGGTACCCTGACTGAGCTGGATGACAAGCTCAGCAGCGGCCTCACCTCAGGCGCACTGCCAGATGCCGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TTCAGACCAAGCCGCAGCTGCTCAACTGTCCTCATGTCCAGGAGCTaGGCTTCGACCAGCTGCCTGCCAGTCACGGTGTGCCTGAGCCCT +
Preference number: 6 (lower is better)
Translates to: FRPSRSCSTVLMSRS*ASTSCLPVTVCLSP
Trigger: AGGGCTCAGGCACACCGTGACTGGCAGGCAGCTGGTCGAAGCCAAGCTCCTGGACATGAGGACAGTTGAGCAGCTGCGGCTTGGTCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp GATCTGACTCAAGCTCTGAATGACCACGCTGAGCTCTaGTCGGAGAGCGGGGACAGACGGCGAGTCAGCCGC +
Preference number: 6 (lower is better)
Translates to: DLTQALNDHAEL*SESGDRRRVSR
Trigger: GCGGCTGACTCGCCGTCTGTCCCCGCTCTCCGATCAGAGCTCAGCGTGGTCATTCAGAGCTTGAGTCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 72 bp CCCCAGGCCTGCTCAGAATGCCCTGGCCAGCCGCTGTaGGCTGTTCATACTGAGGTTTCCGGGTGTCGAACT +
Preference number: 6 (lower is better)
Translates to: PQACSECPGQPL*AVHTEVSGCRT
Trigger: AGTTCGACACCCGGAAACCTCAGTATGAACAGCTCACAGCGGCTGGCCAGGGCATTCTGAGCAGGCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp TTCCTTCCGGCTCGTCCCTTGTCCAAGACGGGGATGTaGGACTGTAACGAGGGAGGGTCAGTGGCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: FLPARPLSKTGM*DCNEGGSVALL
Trigger: GAGGAGGGCCACTGACCCTCCCTCGTTACAGTCTCACATCCCCGTCTTGGACAAGGGACGAGCCGGAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp AGGGTCAGCTTGGTACTGGGGCTCTCCACCCTCATCTaGTACTCCTTGTCCTCCTCGCCCGTCTCCACTGTC +
Preference number: 6 (lower is better)
Translates to: RVSLVLGLSTLI*YSLSSSPVSTV
Trigger: GACAGTGGAGACGGGCGAGGAGGACAAGGAGTAGCAGATGAGGGTGGAGAGCCCCAGTACCAAGCTGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp AGGTCGTCCGCACCTGCCTCCAGGTTCGCCAGTTCTTaGTCGGACTGCTGTAGCCAGTGCTCAAACTCGCTG +
Preference number: 6 (lower is better)
Translates to: RSSAPASRFASS*SDCCSQCSNSL
Trigger: CAGCGAGTTTGAGCACTGGCTACAGCAGTCCGAGCAAGAACTGGCGAACCTGGAGGCAGGTGCGGACGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp AGCTCTTGCCACTTAGTGTCCATCTCTGCCAGTGCCTaGTTCCAGGACTGGGCCTCGGGAGCCTCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: SSCHLVSISASA*FQDWASGASGF
Trigger: GAACCCAGAGGCTCCCGAGGCCCAGTCCTGGAAGCAGGCACTGGCAGAGATGGACACTAAGTGGCAAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp GTTGAGCTCTTGCCACTTAGTGTCCATCTCTGCCAGTaGCTGCTTCCAGGACTGGGCCTCGGGAGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: VELLPLSVHLCQ*LLPGLGLGSLW
Trigger: CCAGAGGCTCCCGAGGCCCAGTCCTGGAAGCAGGCACTGGCAGAGATGGACACTAAGTGGCAAGAGCTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp TCACAGACCTCCTGGGCCTCCTTGATCTTCGGTGCCTaGTGCTCGATTTCCTGCTTCAGCCTCTGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: SQTSWASLIFGA*CSISCFSLWAA
Trigger: GGCAGCCCAGAGGCTGAAGCAGGAAATCGAGCAGCAGGCACCGAAGATCAAGGAGGCCCAGGAGGTCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp GTCCTCACAGACCTCCTGGGCCTCCTTGATCTTCGGTaGCTGCTGCTCGATTTCCTGCTTCAGCCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: VLTDLLGLLDLR*LLLDFLLQPLG
Trigger: GCCCAGAGGCTGAAGCAGGAAATCGAGCAGCAGGCACCGAAGATCAAGGAGGCCCAGGAGGTCTGTGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp TGGAACTCTTCCAGCTTCTCGGTGGCTCCATCCACCTaGTCCTCCCTGGTTTTCGCCCGGTCCAGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: WNSSSFSVAPST*SSLVFARSSSL
Trigger: CAAGCTGCTGGACCGGGCGAAAACCAGGGAGGAGCAGGTGGATGGAGCCACCGAGAAGCTGGAAGAGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp AGGAGCGCTTCCCATCTACTGTCCAAGAGGCTCAGCTaGCTCGTGAGCTTCACTCTGTCCGCAGGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: RSASHLLSKRLS*LVSFTLSAGSA
Trigger: GGCAGAGCCTGCGGACAGAGTGAAGCTCACGAGGCAGCTGAGCCTCTTGGACAGTAGATGGGAAGCGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp CGGAGATGGATGGCGGCTGCCGCAGACGCTCCGCAATaGGTTCCAGGCTCTCAAGGATCTGGTCGATCTTGT +
Preference number: 6 (lower is better)
Translates to: RRWMAAAADAPQ*VPGSQGSGRSC
Trigger: ACAAGATCGACCAGATCCTTGAGAGCCTGGAACGCATTGCGGAGCGTCTGCGGCAGCCGCCATCCATCTCCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp GTGCCCTCGGATCTGGCGATCATCTCCTCTCCCCTCTaGCTCAGAGTCTCGTATAGCGGCTGCAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: VPSDLAIISSPL*LRVSYSGCSFS
Trigger: GGAGAAGCTGCAGCCGCTATACGAGACTCTGAGGCAGAGGGGAGAGGAGATGATCGCCAGATCCGAGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp AGCCTTTCCCTGACAGGTACCCGGGTAGTCGCAGCTTaGTTCCCTGGATTGGTGTGCCCTTGGGTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: SLSLTGTRVVAA*FPGLVCPWVCW
Trigger: CCAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGGGAAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS GCA 72 bp CGGTACTGCTTGGCCTCGCTCTCGGCCCTCAGCTTCTaGAGGGCGATGTCTTCCACGTTCCTCTGTTGCTTC +
Preference number: 6 (lower is better)
Translates to: RYCLASLSALSF*RAMSSTFLCCF
Trigger: GAAGCAACAGAGGAACGTGGAAGACATCGCCCTGCAGAAGCTGAGGGCCGAGAGCGAGGCCAAGCAGTACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp AGTCGCAGGAGCTCCTCCTCGTGGTCCCGCTTTCGTTaGAGTTCTTCCACCAGGGCCCGTTTCTGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: SRRSSSSWSRFR*SSSTRARFCCS
Trigger: GGAACAGCAGAAACGGGCCCTGGTGGAAGAACTGCAACGAAAGCGGGACCACGAGGAGGAGCTCCTGCGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp GGCCGCTGCAACTCGCCTCCTGATGTGTCGGGGGCTTaGTCGGAACCCCTCAGAGCGAAAGTGATGAGATCT +
Preference number: 6 (lower is better)
Translates to: GRCNSPPDVSGA*SEPLRAKVMRS
Trigger: AGATCTCATCACTTTCGCTCTGAGGGGTTCCGAGCAAGCCCCCGACACATCAGGAGGCGAGTTGCAGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CCA 72 bp CATTGTCCTCGGCAATCGTCTTCTCGAGCCCTTCCCTaGCCCTCCAGGGCACCAGTTCCAACAAGGCACTGC +
Preference number: 6 (lower is better)
Translates to: HCPRQSSSRALP*PSRAPVPTRHC
Trigger: GCAGTGCCTTGTTGGAACTGGTGCCCTGGAGGGCCAGGGAAGGGCTCGAGAAGACGATTGCCGAGGACAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp GTTCCCTGGCAGAGCGCTTCAGGGCCTGCACGCTGCTaGTCCTCTTCCCCAGCTCTTTCTGGAAGACCTTGT +
Preference number: 6 (lower is better)
Translates to: VPWQSASGPARC*SSSPALSGRPC
Trigger: ACAAGGTCTTCCAGAAAGAGCTGGGGAAGAGGACCAGCAGCGTGCAGGCCCTGAAGCGCTCTGCCAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GAGTCTTCCTGGACTCAGCGAACTGTGTTCGGACTCTaGCGGCTGCCGTCGTTATCAAGGCGCTGTCCTCCC +
Preference number: 6 (lower is better)
Translates to: ESSWTQRTVFGL*RLPSLSRRCPP
Trigger: GGGAGGACAGCGCCTTGATAACGACGGCAGCCGCCAGAGTCCGAACACAGTTCGCTGAGTCCAGGAAGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp AATTGCGTGTTAAAGGATGGAGAATCTTGGGTGTGCTaGCGGCAGCAGGCACCGGTGGGGAGGCTGCCTGGC +
Preference number: 6 (lower is better)
Translates to: NCVLKDGESWVC*RQQAPVGRLPG
Trigger: GCCAGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGATTCTCCATCCTTTAACACGCAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CCA 72 bp CCTGACAGGTACCCGGGTAGTCGCAGCTTGCTTCCCTaGATTGGTGTGCCCTCTGCGGATGACACGGGAAAG +
Preference number: 6 (lower is better)
Translates to: PDRYPGSRSLLP*IGVPSADDTGK
Trigger: CTTTCCCGTGTCATCCGCAGAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TCCATCTGCTTCACCAGTCGCAGGAGCTCCTCCTCGTaGTCCCGCTTTCGTTGCAGTTCTTCCACCAGGGCC +
Preference number: 6 (lower is better)
Translates to: SICFTSRRSSSS*SRFRCSSSTRA
Trigger: GGCCCTGGTGGAAGAACTGCAACGAAAGCGGGACCACGAGGAGGAGCTCCTGCGACTGGTGAAGCAGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp AGGTGCCCAGAGTTCCCAGGGGAGATCTCTGCAGGGTaGTGGCACTCTCTCCCTGCCGTATCAAAAGCCGAC +
Preference number: 6 (lower is better)
Translates to: RCPEFPGEISAG*WHSLPAVSKAD
Trigger: GTCGGCTTTTGATACGGCAGGGAGAGAGTGCCACCACCCTGCAGAGATCTCCCCTGGGAACTCTGGGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp GGAGCTTGCGGTGCCAGCAGCAGAAGAAGACGATGGTaGCGACGGTGCCCAGCAGGAGCAACAAGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: GACGASSRRRRW*RRCPAGATRGR
Trigger: TCTTCCTCTTGTTGCTCCTGCTGGGCACCGTCGCCACCATCGTCTTCTTCTGCTGCTGGCACCGCAAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CCA 72 bp TCTGGAGCTTGCGGTGCCAGCAGCAGAAGAAGACGATaGTGGCGACGGTGCCCAGCAGGAGCAACAAGAGGA +
Preference number: 6 (lower is better)
Translates to: SGACGASSRRRR*WRRCPAGATRG
Trigger: TCCTCTTGTTGCTCCTGCTGGGCACCGTCGCCACCATCGTCTTCTTCTGCTGCTGGCACCGCAAGCTCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CCA 72 bp CAGAGCTGGGCAGAGGTTTCTGGTCACCGTGCTCTGTaGCTGCCCTCTTCCCCAGCTGCACAGCATCTTCCT +
Preference number: 6 (lower is better)
Translates to: QSWAEVSGHRAL*LPSSPAAQHLP
Trigger: AGGAAGATGCTGTGCAGCTGGGGAAGAGGGCAGCCACAGAGCACGGTGACCAGAAACCTCTGCCCAGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS CAA 72 bp CGCCCGTCTCCACTGTCCTCACTGCTGCGGCCCCCGTaGTCTTCCTCATCCAAGTCGCTACCATCGCTCATA +
Preference number: 6 (lower is better)
Translates to: RPSPLSSLLRPP*SSSSKSLPSLI
Trigger: TATGAGCGATGGTAGCGACTTGGATGAGGAAGACAACGGGGGCCGCAGCAGTGAGGACAGTGGAGACGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 72 bp ATGACGTCCTCTGAGAAGCTCTTCTGCCTCGTCAGCTaGTCCATGAGCCCGCTGAGGTCGTCCGCACCTGCC +
Preference number: 6 (lower is better)
Translates to: MTSSEKLFCLVS*SMSPLRSSAPA
Trigger: GGCAGGTGCGGACGACCTCAGCGGGCTCATGGACAAGCTGACGAGGCAGAAGAGCTTCTCAGAGGACGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp TCCACCTCCACCTTGTCCAGCCAGTTACACAGCTCCTaGTGCATGGACTGCAGCTGGCCGGCGAGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: STSTLSSQLHSS*CMDCSWPASCR
Trigger: TCTGCAGCTCGCCGGCCAGCTGCAGTCCATGCACAAGGAGCTGTGTAACTGGCTGGACAAGGTGGAGGTGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp CTGCCTGTTGCAGGGCTGACTCTAGCCGCGTCTGCTTaGATATGGAGAGTGCACACACGGTCTCCCAGCGGG +
Preference number: 6 (lower is better)
Translates to: LPVAGLTLAASA*IWRVHTRSPSG
Trigger: CCCGCTGGGAGACCGTGTGTGCACTCTCCATATCAAAGCAGACGCGGCTAGAGTCAGCCCTGCAACAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp ACAGGTACCCGGGTAGTCGCAGCTTGCTTCCCTGGATaGGTGTGCCCTCTGCGGATGACACGGGAAAGTCGG +
Preference number: 6 (lower is better)
Translates to: TGTRVVAACFPG*VCPLRMTRESR
Trigger: CCGACTTTCCCGTGTCATCCGCAGAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp CAGTCGCAGGAGCTCCTCCTCGTGGTCCCGCTTTCGTaGCAGTTCTTCCACCAGGGCCCGTTTCTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: QSQELLLVVPLS*QFFHQGPFLLF
Trigger: GAACAGCAGAAACGGGCCCTGGTGGAAGAACTGCAACGAAAGCGGGACCACGAGGAGGAGCTCCTGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp ACTCCGATGAGGTCAGGAGAGGTCTCCTCGGTGGCCAGCATCATCTaGCAGGTTCTGTTGGCGCTGTCGTTGCTCGCCATGAGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: TPMRSGEVSSVASII*QVLLALSLLAMRAS
Trigger: GGAAGCCCTCATGGCGAGCAACGACAGCGCCAACAGAACCTGCAAGATGATGCTGGCCACCGAGGAGACCTCTCCTGACCTCATCGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TGGCTTGTGCTCGGCTATCAGTTCTCGAAGTTGCCGGTGCTCCTCTaGCTGTCTCCTCAGAGTCTCGTACTCCAGGGCTGGGGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: WLVLGYQFSKLPVLL*LSPQSLVLQGWGRQ
Trigger: CTGCCTGCCCCAGCCCTGGAGTACGAGACTCTGAGGAGACAGCAAGAGGAGCACCGGCAACTTCGAGAACTGATAGCCGAGCACAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp CCAGAGTGGAAGCCTTTCCCTGACAGGTACCCGGGTAGTCGCAGCTaGCTTCCCTGGATTGGTGTGCCCTCTGCGGATGACACGGGAAAG +
Preference number: 6 (lower is better)
Translates to: PEWKPFPDRYPGSRS*LPWIGVPSADDTGK
Trigger: CTTTCCCGTGTCATCCGCAGAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGGGAAAGGCTTCCACTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp GGGCCAACAGCTCCTCCTCGAGTCTCCGGCACTTCTGATAGTGGTTaGCTTCCACGGGCGGGCCTTGCTGCATCTTCTCACGGTAGCACT +
Preference number: 6 (lower is better)
Translates to: GPTAPPRVSGTSDSG*LPRAGLAASSHGST
Trigger: AGTGCTACCGTGAGAAGATGCAGCAAGGCCCGCCCGTGGAAGCAAACCACTATCAGAAGTGCCGGAGACTCGAGGAGGAGCTGTTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp AGCACTCGGATGGCCATGGATTCTGAGACCATGCCCTaGGCCAGAGAATCAAGCACGGGGATCGAGGTCGGC +
Preference number: 6 (lower is better)
Translates to: STRMAMDSETMP*ARESSTGIEVG
Trigger: GCCGACCTCGATCCCCGTGCTTGATTCTCTGGCTCAGGGCATGGTCTCAGAATCCATGGCCATCCGAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp CTTCCCATCTACTGTCCAAGAGGCTCAGCTGCCTCGTaGGCTTCACTCTGTCCGCAGGCTCTGCCGAAGCAG +
Preference number: 6 (lower is better)
Translates to: LPIYCPRGSAAS*ASLCPQALPKQ
Trigger: CTGCTTCGGCAGAGCCTGCGGACAGAGTGAAGCTCACGAGGCAGCTGAGCCTCTTGGACAGTAGATGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 72 bp TCTCCGGAGGACACAGCTGGCTGTCCCCCAGCAGGCTaGCTGACGCCCTTCTTGCCTTCTCTTTCACTGCTT +
Preference number: 6 (lower is better)
Translates to: SPEDTAGCPPAG*LTPFLPSLSLL
Trigger: AAGCAGTGAAAGAGAAGGCAAGAAGGGCGTCAGTCAGCCTGCTGGGGGACAGCCAGCTGTGTCCTCCGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS GCA 72 bp GTTCTGCTCCACCTGCAACTTCACAGACTCAGTGTCTaGAGGTGTAGGTGTCTGGCGCCACCTGCTGGCCGT +
Preference number: 6 (lower is better)
Translates to: VLLHLQLHRLSV*RCRCLAPPAGR
Trigger: ACGGCCAGCAGGTGGCGCCAGACACCTACACCTGCAGACACTGAGTCTGTGAAGTTGCAGGTGGAGCAGAAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp CAACTGGTTGAGCTCTTGCCACTTAGTGTCCATCTCTaGCAGTGCCTGCTTCCAGGACTGGGCCTCGGGAGC +
Preference number: 6 (lower is better)
Translates to: QLVELLPLSVHL*QCLLPGLGLGS
Trigger: GCTCCCGAGGCCCAGTCCTGGAAGCAGGCACTGGCAGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp TGCCTGCTGCTCGATTTCCTGCTTCAGCCTCTGGGCTaGCTCCAGTTGTTGGTTCACGGCATCTGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: CLLLDFLLQPLG*LQLLVHGIWQC
Trigger: GCACTGCCAGATGCCGTGAACCAACAACTGGAGGCAGCCCAGAGGCTGAAGCAGGAAATCGAGCAGCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp CAGAACTGGCTAACGAGGGACTGTGCACGCTCCAGCTaGAGGTGCCTCTCTGAGTTGATCTGGCAGACGGCA +
Preference number: 6 (lower is better)
Translates to: QNWLTRDCARSS*RCLSELIWQTA
Trigger: TGCCGTCTGCCAGATCAACTCAGAGAGGCACCTGCAGCTGGAGCGTGCACAGTCCCTCGTTAGCCAGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp GTCTCCGCAGATCGGGGACACCTTGCAAGCATCTGCTaGCCCCTCAGCATCAGGCTCTTGTACGTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: VSADRGHLASIC*PLSIRLLYVSS
Trigger: GGAAGAGACGTACAAGAGCCTGATGCTGAGGGGGCAGCAGATGCTTGCAAGGTGTCCCCGATCTGCGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp AGCCTTTCCCTGACAGGTACCCGGGTAGTCGCAGCTTaGTTCCCTGGATTGGTGTGCCCTCTGCGGATGACA +
Preference number: 6 (lower is better)
Translates to: SLSLTGTRVVAA*FPGLVCPLRMT
Trigger: TGTCATCCGCAGAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGGGAAAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp TTCCCGCCGCTTCTCCTCTTTGGACGCGCTCAGTTCTaGGCTCAGGCTCCTCACCTCCTTCTCCGTTTTCTG +
Preference number: 6 (lower is better)
Translates to: FPPLLLFGRAQF*AQAPHLLLRFL
Trigger: CAGAAAACGGAGAAGGAGGTGAGGAGCCTGAGCGCAGAACTGAGCGCGTCCAAAGAGGAGAAGCGGCGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp CTCCTCCTCGAGTCTCCGGCACTTCTGATAGTGGTTTaGTTCCACGGGCGGGCCTTGCTGCATCTTCTCACG +
Preference number: 6 (lower is better)
Translates to: LLLESPALLIVV*FHGRALLHLLT
Trigger: CGTGAGAAGATGCAGCAAGGCCCGCCCGTGGAAGCAAACCACTATCAGAAGTGCCGGAGACTCGAGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp AGGAACTGTAGGACGGCGTTGTTCAGCAAGCCCTGCTaGACAGCCATTTCTGGAGGGACACGGACGCCTCTC +
Preference number: 6 (lower is better)
Translates to: RNCRTALFSKPC*TAISGGTRTPL
Trigger: GAGAGGCGTCCGTGTCCCTCCAGAAATGGCTGTGCAGCAGGGCTTGCTGAACAACGCCGTCCTACAGTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp TGCAGGAACTGTAGGACGGCGTTGTTCAGCAAGCCCTaGTGCACAGCCATTTCTGGAGGGACACGGACGCCT +
Preference number: 6 (lower is better)
Translates to: CRNCRTALFSKP*CTAISGGTRTP
Trigger: AGGCGTCCGTGTCCCTCCAGAAATGGCTGTGCAGCAGGGCTTGCTGAACAACGCCGTCCTACAGTTCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp AGCTGCTGGGCGAAGCCCTCGTCCACCAGCCCTCTATaGAAAGCCTCGGCCACCCTGTACTTTTTCCCAGTT +
Preference number: 6 (lower is better)
Translates to: SCWAKPSSTSPL*KASATLYFFPV
Trigger: AACTGGGAAAAAGTACAGGGTGGCCGAGGCTTTGCATAGAGGGCTGGTGGACGAGGGCTTCGCCCAGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp CTGATCCCCGTGATCACTAATTCACACTGGCGTAGCTaGTGGGCGAAGCCCTCGTCCACCAGCCCTCTATGC +
Preference number: 6 (lower is better)
Translates to: LIPVITNSHWRS*WAKPSSTSPLC
Trigger: GCATAGAGGGCTGGTGGACGAGGGCTTCGCCCAGCAGCTACGCCAGTGTGAATTAGTGATCACGGGGATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp TCCACTGTGTCTGCATGGCCGCTCTGTACGCCTCGATaGTCAAGCGGGCTGGGTGGTTTTCCAGAAGCAGCT +
Preference number: 6 (lower is better)
Translates to: STVSAWPLCTPR*SSGLGGFPEAA
Trigger: AGCTGCTTCTGGAAAACCACCCAGCCCGCTTGACCATCGAGGCGTACAGAGCGGCCATGCAGACACAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 72 bp ATTTCCTGCTTCAGCCTCTGGGCTGCCTCCAGTTGTTaGTTCACGGCATCTGGCAGTGCGCCTGAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: ISCFSLWAASSC*FTASGSAPEVR
Trigger: CCTCACCTCAGGCGCACTGCCAGATGCCGTGAACCAACAACTGGAGGCAGCCCAGAGGCTGAAGCAGGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp ACGGGGCCCTGGGACTCTTCGTGTTCTTCAGCCTTCTaGAGCAGAGTGGAGAACTCCTCCAGCTTACGGTGG +
Preference number: 6 (lower is better)
Translates to: TGPWDSSCSSAF*SRVENSSSLRW
Trigger: CCACCGTAAGCTGGAGGAGTTCTCCACTCTGCTCCAGAAGGCTGAAGAACACGAAGAGTCCCAGGGCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp CCACCTTGTCCAGCCAGTTACACAGCTCCTTGTGCATaGACTGCAGCTGGCCGGCGAGCTGCAGAGCATGTT +
Preference number: 6 (lower is better)
Translates to: PPCPASYTAPCA*TAAGRRAAEHV
Trigger: AACATGCTCTGCAGCTCGCCGGCCAGCTGCAGTCCATGCACAAGGAGCTGTGTAACTGGCTGGACAAGGTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp AGCAGCCCTGTGCGGCCATTTTCCTTCTGTCTGGTGTaGCTCCTGAGTCCACCTGGACAGTGGGAGTCTGGT +
Preference number: 6 (lower is better)
Translates to: SSPVRPFSFCLV*LLSPPGQWESG
Trigger: ACCAGACTCCCACTGTCCAGGTGGACTCAGGAGCCACACCAGACAGAAGGAAAATGGCCGCACAGGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp GGCGTTGTTCAGCAAGCCCTGCTGCACAGCCATTTCTaGAGGGACACGGACGCCTCTCACAGGGTCAATGAC +
Preference number: 6 (lower is better)
Translates to: GVVQQALLHSHF*RDTDASHRVND
Trigger: GTCATTGACCCTGTGAGAGGCGTCCGTGTCCCTCCAGAAATGGCTGTGCAGCAGGGCTTGCTGAACAACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp TTGGTACTGGGGCTCTCCACCCTCATCTGCTACTCCTaGTCCTCCTCGCCCGTCTCCACTGTCCTCACTGCT +
Preference number: 6 (lower is better)
Translates to: LVLGLSTLICYS*SSSPVSTVLTA
Trigger: AGCAGTGAGGACAGTGGAGACGGGCGAGGAGGACAAGGAGTAGCAGATGAGGGTGGAGAGCCCCAGTACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 72 bp GTCTCCTCGGTGGCCAGCATCATCTTGCAGGTTCTGTaGGCGCTGTCGTTGCTCGCCATGAGGGCTTCCAGT +
Preference number: 6 (lower is better)
Translates to: VSSVASIILQVL*ALSLLAMRASS
Trigger: ACTGGAAGCCCTCATGGCGAGCAACGACAGCGCCAACAGAACCTGCAAGATGATGCTGGCCACCGAGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp AGGTCAGGAGAGGTCTCCTCGGTGGCCAGCATCATCTaGCAGGTTCTGTTGGCGCTGTCGTTGCTCGCCATG +
Preference number: 6 (lower is better)
Translates to: RSGEVSSVASII*QVLLALSLLAM
Trigger: CATGGCGAGCAACGACAGCGCCAACAGAACCTGCAAGATGATGCTGGCCACCGAGGAGACCTCTCCTGACCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp AAGCCTTTCCCTGACAGGTACCCGGGTAGTCGCAGCTaGCTTCCCTGGATTGGTGTGCCCTTGGGTGTGCTG +
Preference number: 6 (lower is better)
Translates to: KPFPDRYPGSRS*LPWIGVPLGVL
Trigger: CAGCACACCCAAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGGGAAAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182507.4
CDS CAA 72 bp AAGCCTTTCCCTGACAGGTACCCGGGTAGTCGCAGCTaGCTTCCCTGGATTGGTGTGCCCTCTGCGGATGAC +
Preference number: 6 (lower is better)
Translates to: KPFPDRYPGSRS*LPWIGVPSADD
Trigger: GTCATCCGCAGAGGGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGGGAAAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp GCTCCTCCTCGAGTCTCCGGCACTTCTGATAGTGGTTaGCTTCCACGGGCGGGCCTTGCTGCATCTTCTCAC +
Preference number: 6 (lower is better)
Translates to: APPRVSGTSDSG*LPRAGLAASSH
Trigger: GTGAGAAGATGCAGCAAGGCCCGCCCGTGGAAGCAAACCACTATCAGAAGTGCCGGAGACTCGAGGAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp TTTTTGGGGTCCAAAGCAATGGGCTCCCGTAAATGTTTGCTGGCTTaGGCCTCGCAGGCCTGGAGCCCGGAGAGAAGGCCGCAGGAAGCA +
Preference number: 6 (lower is better)
Translates to: FLGSKAMGSRKCLLA*ASQAWSPERRPQEA
Trigger: TGCTTCCTGCGGCCTTCTCTCCGGGCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCCCATTGCTTTGGACCCCAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TCTTTGACCAGTGCCGACAGGTCCTCACAGACCTCCTGGGCCTCCTaGATCTTCGGTGCCTGCTGCTCGATTTCCTGCTTCAGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: SLTSADRSSQTSWAS*IFGACCSISCFSLW
Trigger: CCAGAGGCTGAAGCAGGAAATCGAGCAGCAGGCACCGAAGATCAAGGAGGCCCAGGAGGTCTGTGAGGACCTGTCGGCACTGGTCAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp GCTCCATCCACCTGCTCCTCCCTGGTTTTCGCCCGGTCCAGCAGCTaGTTGCACTGCTTGCTCAAGGCTTCTAAGTCCCTCTTGACTCCG +
Preference number: 6 (lower is better)
Translates to: APSTCSSLVFARSSS*LHCLLKASKSLLTP
Trigger: CGGAGTCAAGAGGGACTTAGAAGCCTTGAGCAAGCAGTGCAACAAGCTGCTGGACCGGGCGAAAACCAGGGAGGAGCAGGTGGATGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp GCTTTCGGGTCTCCTCCAACGGGTTTCTGTTCACTTAGCAAGCCTTaGGTGTGTGTCAGCCATGCGAGGAGCTCGTCCAGGGCGTGCTGG +
Preference number: 6 (lower is better)
Translates to: AFGSPPTGFCSLSKP*VCVSHARSSSRACW
Trigger: CCAGCACGCCCTGGACGAGCTCCTCGCATGGCTGACACACACCAAAGGCTTGCTAAGTGAACAGAAACCCGTTGGAGGAGACCCGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp CTGCTTCACCAGTCGCAGGAGCTCCTCCTCGTGGTCCCGCTTTCGTaGCAGTTCTTCCACCAGGGCCCGTTTCTGCTGTTCCAGATCACT +
Preference number: 6 (lower is better)
Translates to: LLHQSQELLLVVPLS*QFFHQGPFLLFQIT
Trigger: AGTGATCTGGAACAGCAGAAACGGGCCCTGGTGGAAGAACTGCAACGAAAGCGGGACCACGAGGAGGAGCTCCTGCGACTGGTGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp CGACCCGAAAAGACCGATTTCATCGGATGTCTCCCTTTCTGGAGCTaGCGGTGCCAGCAGCAGAAGAAGACGATGGTGGCGACGGTGCCC +
Preference number: 6 (lower is better)
Translates to: RPEKTDFIGCLPFWS*RCQQQKKTMVATVP
Trigger: GGGCACCGTCGCCACCATCGTCTTCTTCTGCTGCTGGCACCGCAAGCTCCAGAAAGGGAGACATCCGATGAAATCGGTCTTTTCGGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CAA 90 bp GCTTCAGAGACAAGGCGCGTTCTCTGTGTGGCTCCTCCTCAGCGCTaGCTTTCTCTCTGCTGCTTTCTAACTGCGGGCAGCCCACGTCTA +
Preference number: 6 (lower is better)
Translates to: ASETRRVLCVAPPQR*LSLCCFLTAGSPRL
Trigger: TAGACGTGGGCTGCCCGCAGTTAGAAAGCAGCAGAGAGAAAGCAAGCGCTGAGGAGGAGCCACACAGAGAACGCGCCTTGTCTCTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 90 bp CTTTGCAGATTTTTGGGGTCCAAAGCAATGGGCTCCCGTAAATGTTaGCTGGCTTTGGCCTCGCAGGCCTGGAGCCCGGAGAGAAGGCCG +
Preference number: 6 (lower is better)
Translates to: LCRFLGSKAMGSRKC*LALASQAWSPERRP
Trigger: CGGCCTTCTCTCCGGGCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCCCATTGCTTTGGACCCCAAAAATCTGCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp GGAATTCCTCTGCCTGTTGCAGGGCTGACTCTAGCCGCGTCTGCTTaGATATGGAGAGTGCACACACGGTCTCCCAGCGGGTGCTTAGCT +
Preference number: 6 (lower is better)
Translates to: GIPLPVAGLTLAASA*IWRVHTRSPSGCLA
Trigger: AGCTAAGCACCCGCTGGGAGACCGTGTGTGCACTCTCCATATCAAAGCAGACGCGGCTAGAGTCAGCCCTGCAACAGGCAGAGGAATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp CCTGTGGGTCATCTGCTCTTCGATGGTCTTCAGGTGCAGCTCGTCTaGCACCCTCTTCAGCCTGTCATTCAGCTCCTGCACCTGAGCTCG +
Preference number: 6 (lower is better)
Translates to: PVGHLLFDGLQVQLV*HPLQPVIQLLHLSS
Trigger: CGAGCTCAGGTGCAGGAGCTGAATGACAGGCTGAAGAGGGTGCAAGACGAGCTGCACCTGAAGACCATCGAAGAGCAGATGACCCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp ACTCTCGTGTTGCTGGACGGTTCATGCAGGAACTGTAGGACGGCGTaGTTCAGCAAGCCCTGCTGCACAGCCATTTCTGGAGGGACACGG +
Preference number: 6 (lower is better)
Translates to: TLVLLDGSCRNCRTA*FSKPCCTAISGGTR
Trigger: CCGTGTCCCTCCAGAAATGGCTGTGCAGCAGGGCTTGCTGAACAACGCCGTCCTACAGTTCCTGCATGAACCGTCCAGCAACACGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp CCTTCTAAGTCCCGGAGCCTGTTGTCGATCTGGACGTaGACGCTCTGCCACCTTTCGACAAGCTGGTCTGCC +
Preference number: 6 (lower is better)
Translates to: PSKSRSLLSIWT*TLCHLSTSWSA
Trigger: GGCAGACCAGCTTGTCGAAAGGTGGCAGAGCGTTCACGTCCAGATCGACAACAGGCTCCGGGACTTAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 72 bp GTCTGTTGCCGTGTCGCTCTGCTGGCCGGCCAGCAGTaGCGTCTCATAGTCACCAGCATCAATGGCTCCTTT +
Preference number: 6 (lower is better)
Translates to: VCCRVALLAGQQ*RLIVTSINGSF
Trigger: AAAGGAGCCATTGATGCTGGTGACTATGAGACGTCACTGCTGGCCGGCCAGCAGAGCGACACGGCAACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp AGGCGGCCATACCCTGGCTGGCACCGTCTGCTAGGATaGACTTTTCCCGCAGCTCCATGTTGGTCCTTCCTT +
Preference number: 6 (lower is better)
Translates to: RRPYPGWHRLLG*TFPAAPCWSFL
Trigger: AAGGAAGGACCAACATGGAGCTGCGGGAAAAGTTCATCCTAGCAGACGGTGCCAGCCAGGGTATGGCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS GCA 72 bp CGTAGCCCCGCTGAGCCTCCAGAACCAGCAGCGCGCTaGTGGAAGTTATCAACTCACACTGTACTGCTTCGT +
Preference number: 6 (lower is better)
Translates to: RSPAEPPEPAAR*WKLSTHTVLLR
Trigger: ACGAAGCAGTACAGTGTGAGTTGATAACTTCCAGCAGCGCGCTGCTGGTTCTGGAGGCTCAGCGGGGCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp CAGCTCCGAGTTCTGTGCCGCAGCTTTCCAGAAGCATaGCCACGGCCTCATCCAAGTCTCCGTCATAGAGCA +
Preference number: 6 (lower is better)
Translates to: QLRVLCRSFPEA*PRPHPSLRHRA
Trigger: TGCTCTATGACGGAGACTTGGATGAGGCCGTGGGCATGCTTCTGGAAAGCTGCGGCACAGAACTCGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp CTTCCCATCCAGTCCAGCATCTCATCCAAAGCGTCCTaGACACTCAGGGAGCGGGTCAGAGTGATCTGGAGC +
Preference number: 6 (lower is better)
Translates to: LPIQSSISSKAS*TLRERVRVIWS
Trigger: GCTCCAGATCACTCTGACCCGCTCCCTGAGTGTGCAGGACGCTTTGGATGAGATGCTGGACTGGATGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp TTGTCCAGCCAGTTACACAGCTCCTTGTGCATGGACTaGAGCTGGCCGGCGAGCTGCAGAGCATGTTCTAGG +
Preference number: 6 (lower is better)
Translates to: LSSQLHSSLCMD*SWPASCRACSR
Trigger: CCTAGAACATGCTCTGCAGCTCGCCGGCCAGCTGCAGTCCATGCACAAGGAGCTGTGTAACTGGCTGGACAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp ATCTCCTCTCTGATTGCCTCTGCAGCTTCCTGCTGCTaGTTTACGACCGAGGGGTCGATTCCGGGATCCTCC +
Preference number: 6 (lower is better)
Translates to: ISSLIASAASCC*FTTEGSIPGSS
Trigger: GGAGGATCCCGGAATCGACCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGCAGAGGCAATCAGAGAGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp CCGTCAATCTCCTCTCTGATTGCCTCTGCAGCTTCCTaGTGCTGCTTTACGACCGAGGGGTCGATTCCGGGA +
Preference number: 6 (lower is better)
Translates to: PSISSLIASAAS*CCFTTEGSIPG
Trigger: TCCCGGAATCGACCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGCAGAGGCAATCAGAGAGGAGATTGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp TTGGTCTCCGCAGATCGGGGACACCTTGCAAGCATCTaGTGCCCCCTCAGCATCAGGCTCTTGTACGTCTCT +
Preference number: 6 (lower is better)
Translates to: LVSADRGHLASI*CPLSIRLLYVS
Trigger: AGAGACGTACAAGAGCCTGATGCTGAGGGGGCAGCAGATGCTTGCAAGGTGTCCCCGATCTGCGGAGACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp TCCTCTGCCTGTTGCAGGGCTGACTCTAGCCGCGTCTaGTTTGATATGGAGAGTGCACACACGGTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: SSACCRADSSRV*FDMESAHTVSQ
Trigger: CTGGGAGACCGTGTGTGCACTCTCCATATCAAAGCAGACGCGGCTAGAGTCAGCCCTGCAACAGGCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp GATTTTAGAAGGCTTGGCTGTGGATGGCCGAGAACCTaGTCGGGGCACAGGTCTGTGTGTCTGTGGGACGGT +
Preference number: 6 (lower is better)
Translates to: DFRRLGCGWPRT*SGHRSVCLWDG
Trigger: ACCGTCCCACAGACACACAGACCTGTGCCCCGAGCAGGTTCTCGGCCATCCACAGCCAAGCCTTCTAAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp CATAATTGCGTGTTAAAGGATGGAGAATCTTGGGTGTaGTGGCGGCAGCAGGCACCGGTGGGGAGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: HNCVLKDGESWV*WRQQAPVGRLP
Trigger: AGGCAGCCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGATTCTCCATCCTTTAACACGCAATTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CCA 72 bp TCCTGGCTATCCTCCAGGAAATCCTCCAAGCGGGACTaGAGATTACTGAGAACCTGCTGGTGCTCGCCAGGC +
Preference number: 6 (lower is better)
Translates to: SWLSSRKSSKRD*RLLRTCWCSPG
Trigger: GCCTGGCGAGCACCAGCAGGTTCTCAGTAATCTCCAGTCCCGCTTGGAGGATTTCCTGGAGGATAGCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 72 bp GTTGGAAAGCCTGTTGTAAGGTCAGGTGTTCACCTGTaGCTGGAACAAGCAGGGGGCCCGCGGACAGCAGTA +
Preference number: 6 (lower is better)
Translates to: VGKPVVRSGVHL*LEQAGGPRTAV
Trigger: TACTGCTGTCCGCGGGCCCCCTGCTTGTTCCAGCCACAGGTGAACACCTGACCTTACAACAGGCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp AGCCCCGCTGAGCCTCCAGAACCAGCAGCGCGCTGCTaGAAGTTATCAACTCACACTGTACTGCTTCGTCCA +
Preference number: 6 (lower is better)
Translates to: SPAEPPEPAARC*KLSTHTVLLRP
Trigger: TGGACGAAGCAGTACAGTGTGAGTTGATAACTTCCAGCAGCGCGCTGCTGGTTCTGGAGGCTCAGCGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp CCAGCTGCAGGAGAGCCTCTAACCGGTCCGCCTCAGTaGTTACCAGCTCCTGCAGGTCAAGAAAACCCTTCT +
Preference number: 6 (lower is better)
Translates to: PAAGEPLTGPPQ*LPAPAGQENPS
Trigger: AGAAGGGTTTTCTTGACCTGCAGGAGCTGGTAACCACTGAGGCGGACCGGTTAGAGGCTCTCCTGCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS CCA 72 bp AGCCAGTTACACAGCTCCTTGTGCATGGACTGCAGCTaGCCGGCGAGCTGCAGAGCATGTTCTAGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: SQLHSSLCMDCS*PASCRACSRVF
Trigger: GAAGACCCTAGAACATGCTCTGCAGCTCGCCGGCCAGCTGCAGTCCATGCACAAGGAGCTGTGTAACTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp TCCGTCAGCCACTGTTGCAAATCTTCGATTTCACCGTaGAACCCTTTGGCCTGGCGCAAGGCGCTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: SVSHCCKSSISP*NPLAWRKALSS
Trigger: GCTGGACAGCGCCTTGCGCCAGGCCAAAGGGTTCCACGGTGAAATCGAAGATTTGCAACAGTGGCTGACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp ATTCCATCAGCTTGCTCCACGCTTCATGGAACTGCTTaGCCCTCTTCCTGGCTTCGTCCAGGGATCGCCCTC +
Preference number: 6 (lower is better)
Translates to: IPSACSTLHGTA*PSSWLRPGIAL
Trigger: GAGGGCGATCCCTGGACGAAGCCAGGAAGAGGGCCAAGCAGTTCCATGAAGCGTGGAGCAAGCTGATGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TCAATGTCCCCGTGGACAGGCTGGTCTTCTGCCAGCTaGGGCTCAACTCGATACAGCCAATCAATGAGGGCC +
Preference number: 6 (lower is better)
Translates to: SMSPWTGWSSAS*GSTRYSQSMRA
Trigger: GGCCCTCATTGATTGGCTGTATCGAGTTGAGCCCCAGCTGGCAGAAGACCAGCCTGTCCACGGGGACATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GTTGCAGGGCTGACTCTAGCCGCGTCTGCTTTGATATaGAGAGTGCACACACGGTCTCCCAGCGGGTGCTTA +
Preference number: 6 (lower is better)
Translates to: VAGLTLAASALI*RVHTRSPSGCL
Trigger: TAAGCACCCGCTGGGAGACCGTGTGTGCACTCTCCATATCAAAGCAGACGCGGCTAGAGTCAGCCCTGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TCTGCCAGCCACTCCAAGAGGGTGTGGACCACAGAGTaGAATTCCTCTGCCTGTTGCAGGGCTGACTCTAGC +
Preference number: 6 (lower is better)
Translates to: SASHSKRVWTTE*NSSACCRADSS
Trigger: GCTAGAGTCAGCCCTGCAACAGGCAGAGGAATTCCACTCTGTGGTCCACACCCTCTTGGAGTGGCTGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GTCCGGAGAGCATCCTCATCATCTGGGAGAGCACCATaGAAACGCAGGGTTTGCTCTGCTTCTGCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: VRRASSSSGRAP*KRRVCSASASH
Trigger: GTGGCTGGCAGAAGCAGAGCAAACCCTGCGTTTCCATGGTGCTCTCCCAGATGATGAGGATGCTCTCCGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GGTGGCAGACGGCCAGAAGAGCGTCCCCCATACCGGTaGCCTTACTTAGTTCTGCCCTTTTCTCTTCCAGTC +
Preference number: 6 (lower is better)
Translates to: GGRRPEERPPYR*PYLVLPFSLPV
Trigger: GACTGGAAGAGAAAAGGGCAGAACTAAGTAAGGCCACCGGTATGGGGGACGCTCTTCTGGCCGTCTGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp AGCCGGGCCTTTTCCTCAGACGAGGCCTTTTCGAGCTaGACCGCGCTGAGTTCATACTTCAGCTCCCTCATC +
Preference number: 6 (lower is better)
Translates to: SRAFSSDEAFSS*TALSSYFSSLI
Trigger: GATGAGGGAGCTGAAGTATGAACTCAGCGCGGTCCAGCTCGAAAAGGCCTCGTCTGAGGAAAAGGCCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp CCGTCTGCCTGGATCCGCAGCACTTCGCATCTCTGCTaGATGGCTTGCTTCTCGCGGACTATGTTCTTGGAC +
Preference number: 6 (lower is better)
Translates to: PSAWIRSTSHLC*MACFSRTMFLD
Trigger: GTCCAAGAACATAGTCCGCGAGAAGCAAGCCATCCAGCAGAGATGCGAAGTGCTGCGGATCCAGGCAGACGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp TTTTTGGGGTCCAAAGCAATGGGCTCCCGTAAATGTTaGCTGGCTTTGGCCTCGCAGGCCTGGAGCCCGGAG +
Preference number: 6 (lower is better)
Translates to: FLGSKAMGSRKC*LALASQAWSPE
Trigger: CTCCGGGCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCCCATTGCTTTGGACCCCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp CTCGGCTATCAGTTCTCGAAGTTGCCGGTGCTCCTCTaGCTGTCTCCTCAGAGTCTCGTACTCCAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: LGYQFSKLPVLL*LSPQSLVLQGW
Trigger: CCAGCCCTGGAGTACGAGACTCTGAGGAGACAGCAAGAGGAGCACCGGCAACTTCGAGAACTGATAGCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp CTTGGTCAATGTTGGTCTCCGCAGATCGGGGACACCTaGCAAGCATCTGCTGCCCCCTCAGCATCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: LGQCWSPQIGDT*QASAAPSASGS
Trigger: AGAGCCTGATGCTGAGGGGGCAGCAGATGCTTGCAAGGTGTCCCCGATCTGCGGAGACCAACATTGACCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp GACCAGCTGCCTGCCAGTCACGGTGTGCCTGAGCCCTaGAAACTGAAACTCCTCATCCCTAACAGAGCACGC +
Preference number: 6 (lower is better)
Translates to: DQLPASHGVPEP*KLKLLIPNRAR
Trigger: GCGTGCTCTGTTAGGGATGAGGAGTTTCAGTTTCAAGGGCTCAGGCACACCGTGACTGGCAGGCAGCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp CGCGTTCCCGGAGCTAGGCCTTCTGGTGGAAGCACCTaGAACAGAGTGATAGAATTCTGGCTGCACCCGGCT +
Preference number: 6 (lower is better)
Translates to: RVPGARPSGGST*NRVIEFWLHPA
Trigger: AGCCGGGTGCAGCCAGAATTCTATCACTCTGTTCAAGGTGCTTCCACCAGAAGGCCTAGCTCCGGGAACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CAA 90 bp TCCAGCAGCTTGTTGCACTGCTTGCTCAAGGCTTCTAAGTCCCTCTaGACTCCGATGAGGTCAGGAGAGGTCTCCTCGGTGGCCAGCATC +
Preference number: 6 (lower is better)
Translates to: SSSLLHCLLKASKSL*TPMRSGEVSSVASI
Trigger: GATGCTGGCCACCGAGGAGACCTCTCCTGACCTCATCGGAGTCAAGAGGGACTTAGAAGCCTTGAGCAAGCAGTGCAACAAGCTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp CTAACGAGGGACTGTGCACGCTCCAGCTGCAGGTGCCTCTCTGAGTaGATCTGGCAGACGGCATCGTACTTCTTCAGTACCTTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: LTRDCARSSCRCLSE*IWQTASYFFSTLSS
Trigger: GCTGGACAAGGTACTGAAGAAGTACGATGCCGTCTGCCAGATCAACTCAGAGAGGCACCTGCAGCTGGAGCGTGCACAGTCCCTCGTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp CGGGGACACCTTGCAAGCATCTGCTGCCCCCTCAGCATCAGGCTCTaGTACGTCTCTTCCTTGATGGCAAAGGCGGTGCAGACTTCCATA +
Preference number: 6 (lower is better)
Translates to: RGHLASICCPLSIRL*YVSSLMAKAVQTSI
Trigger: TATGGAAGTCTGCACCGCCTTTGCCATCAAGGAAGAGACGTACAAGAGCCTGATGCTGAGGGGGCAGCAGATGCTTGCAAGGTGTCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp CTGGGTGAGGAGATCACACAGCCCTTGGAGTTTCTCTCTGTACTCTaGCTGACGCTCTGCCACAACCTTCTCCGGGACCTTCGACTCTCC +
Preference number: 6 (lower is better)
Translates to: LGEEITQPLEFLSVL*LTLCHNLLRDLRLS
Trigger: GGAGAGTCGAAGGTCCCGGAGAAGGTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAACTCCAAGGGCTGTGTGATCTCCTCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097786.10
ENSMUST00000185269.7
CDS CAA 90 bp ACCGTCTGCCTGGATCCGCAGCACTTCGCATCTCTGCTGGATGGCTaGCTTCTCGCGGACTATGTTCTTGGACTCTGCCTGAATCCTCTG +
Preference number: 6 (lower is better)
Translates to: TVCLDPQHFASLLDG*LLADYVLGLCLNPL
Trigger: CAGAGGATTCAGGCAGAGTCCAAGAACATAGTCCGCGAGAAGCAAGCCATCCAGCAGAGATGCGAAGTGCTGCGGATCCAGGCAGACGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp CTTGGCTTCGACCAGCTGCCTGCCAGTCACGGTGTGCCTGAGCCCTaGAAACTGAAACTCCTCATCCCTAACAGAGCACGCCTGGTTAAG +
Preference number: 6 (lower is better)
Translates to: LGFDQLPASHGVPEP*KLKLLIPNRARLVK
Trigger: CTTAACCAGGCGTGCTCTGTTAGGGATGAGGAGTTTCAGTTTCAAGGGCTCAGGCACACCGTGACTGGCAGGCAGCTGGTCGAAGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp GCTGCTTCTTTCTGTGTCCCAACCTCCCCTACCAGCTaGCTCTGGCTGGAAAACACCTGCACCATGCTGCGT +
Preference number: 6 (lower is better)
Translates to: AASFCVPTSPTS*LWLENTCTMLR
Trigger: ACGCAGCATGGTGCAGGTGTTTTCCAGCCAGAGTCAGCTGGTAGGGGAGGTTGGGACACAGAAAGAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp GGAGCGCTGTGGAGTTTAGTGGCACTTGACCTGGCTTaGCCAGGGAGCTTTCCACACTTCCCATCCAGTCCA +
Preference number: 6 (lower is better)
Translates to: GALWSLVALDLA*PGSFPHFPSSP
Trigger: TGGACTGGATGGGAAGTGTGGAAAGCTCCCTGGTCAAGCCAGGTCAAGTGCCACTAAACTCCACAGCGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp GTTAACCCTGGGGTTCTTGGTCTCGATTTGCGTCTGTaGGCCAGATGGATAGAAGCCCGAGGCTGGGAAGCG +
Preference number: 6 (lower is better)
Translates to: VNPGVLGLDLRL*ARWIEARGWEA
Trigger: CGCTTCCCAGCCTCGGGCTTCTATCCATCTGGCTCACAGACGCAAATCGAGACCAAGAACCCCAGGGTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp CAGCTTGCTTCCCTGGATTGGTGTGCCCTCTGCGGATaGCACGGGAAAGTCGGGGCATTCTGCTGCTTTACA +
Preference number: 6 (lower is better)
Translates to: QLASLDWCALCG*HGKVGAFCCFT
Trigger: TGTAAAGCAGCAGAATGCCCCGACTTTCCCGTGTCATCCGCAGAGGGCACACCAATCCAGGGAAGCAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp CTTTCCTCCGCAGATGATCTTCCAGCGTCTGCCTGGTaGAGGTGTTTTCCTGCAGCTGGCTCCGGAAGTTGC +
Preference number: 6 (lower is better)
Translates to: LSSADDLPASAW*RCFPAAGSGSC
Trigger: GCAACTTCCGGAGCCAGCTGCAGGAAAACACCTTCACCAGGCAGACGCTGGAAGATCATCTGCGGAGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp CTGTGCGGCCATTTTCCTTCTGTCTGGTGTGGCTCCTaGGTCCACCTGGACAGTGGGAGTCTGGTCTTTAGG +
Preference number: 6 (lower is better)
Translates to: LCGHFPSVWCGS*VHLDSGSLVFR
Trigger: CCTAAAGACCAGACTCCCACTGTCCAGGTGGACTCAGGAGCCACACCAGACAGAAGGAAAATGGCCGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp AGTTCAGCCCGCTGTCTCCACAGTGCCTCTGGGCTGTaGTCCTGGACTGACAGCTTGCTCAGTTTGCCATGT +
Preference number: 6 (lower is better)
Translates to: SSARCLHSASGL*SWTDSLLSLPC
Trigger: ACATGGCAAACTGAGCAAGCTGTCAGTCCAGGATCACAGCCCAGAGGCACTGTGGAGACAGCGGGCTGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 72 bp TCTGTTTCCGGAGGAGAATGTCTTCTTGTAGAGCCCTaGGTTCAGCCCGCTGTCTCCACAGTGCCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: SVSGGECLLVEP*VQPAVSTVPLG
Trigger: GCCCAGAGGCACTGTGGAGACAGCGGGCTGAACTCAGGGCTCTACAAGAAGACATTCTCCTCCGGAAACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp TCTCAAGCACTCGGATGGCCATGGATTCTGAGACCATaGCCTGAGCCAGAGAATCAAGCACGGGGATCGAGG +
Preference number: 6 (lower is better)
Translates to: SQALGWPWILRP*PEPENQARGSR
Trigger: CCTCGATCCCCGTGCTTGATTCTCTGGCTCAGGGCATGGTCTCAGAATCCATGGCCATCCGAGTGCTTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp TCCACCCGTCTGAACCTGGTAAGTGAGGATGCTGCTTaGGGTGTCTCTGTCAATCACCCCTTCTGCCACAGC +
Preference number: 6 (lower is better)
Translates to: STRLNLVSEDAA*GVSVNHPFCHS
Trigger: GCTGTGGCAGAAGGGGTGATTGACAGAGACACCGCAAGCAGCATCCTCACTTACCAGGTTCAGACGGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp TCAATCTCCTCTCTGATTGCCTCTGCAGCTTCCTGCTaGTGCTTTACGACCGAGGGGTCGATTCCGGGATCC +
Preference number: 6 (lower is better)
Translates to: SISSLIASAASC*CFTTEGSIPGS
Trigger: GGATCCCGGAATCGACCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGCAGAGGCAATCAGAGAGGAGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp TCTACCAGGCGCTGCACCACCTTTTCCCACCGACTCTaGACGCTGATGAGCAGGTTCTTGATGAGCACGACA +
Preference number: 6 (lower is better)
Translates to: STRRCTTFSHRL*TLMSRFLMSTT
Trigger: TGTCGTGCTCATCAAGAACCTGCTCATCAGCGTGCAGAGTCGGTGGGAAAAGGTGGTGCAGCGCCTGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp TCTGCCTTCCTATTGGCCAAGGTCAGCTCATCCACCTaGTGCTTCAGCTCCTCCTCTTTCTGTCTGCCCTGC +
Preference number: 6 (lower is better)
Translates to: SAFLLAKVSSST*CFSSSSFCLPC
Trigger: GCAGGGCAGACAGAAAGAGGAGGAGCTGAAGCAGCAGGTGGATGAGCTGACCTTGGCCAATAGGAAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp GATTTCATCGGATGTCTCCCTTTCTGGAGCTTGCGGTaGCAGCAGCAGAAGAAGACGATGGTGGCGACGGTG +
Preference number: 6 (lower is better)
Translates to: DFIGCLPFWSLR*QQQKKTMVATV
Trigger: CACCGTCGCCACCATCGTCTTCTTCTGCTGCTGGCACCGCAAGCTCCAGAAAGGGAGACATCCGATGAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS GCA 72 bp ACTTGTGTGCCCCGTCTCTGGGCACAACCAATGCCGTaGTCTTCGTACTCTCTCTCAGCGGGTTCTGCACAT +
Preference number: 6 (lower is better)
Translates to: TCVPRLWAQPMP*SSYSLSAGSAH
Trigger: ATGTGCAGAACCCGCTGAGAGAGAGTACGAAGAGCACGGCATTGGTTGTGCCCAGAGACGGGGCACACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS GCA 72 bp AATCCACTTGTGTGCCCCGTCTCTGGGCACAACCAATaGCGTGCTCTTCGTACTCTCTCTCAGCGGGTTCTG +
Preference number: 6 (lower is better)
Translates to: NPLVCPVSGHNQ*RALRTLSQRVL
Trigger: CAGAACCCGCTGAGAGAGAGTACGAAGAGCACGGCATTGGTTGTGCCCAGAGACGGGGCACACAAGTGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CCA 72 bp CTTAGCCGGACCTCGGCAGCTGGAGGCCAGTCTTCTTaGGGACGGACTGACTTCTCCCCAGCATTATTTACA +
Preference number: 6 (lower is better)
Translates to: LSRTSAAGGQSS*GRTDFSPALFT
Trigger: TGTAAATAATGCTGGGGAGAAGTCAGTCCGTCCCCAAGAAGACTGGCCTCCAGCTGCCGAGGTCCGGCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp TTCTTGGGGCTTCAGAGACAAGGCGCGTTCTCTGTGTaGCTCCTCCTCAGCGCTTGCTTTCTCTCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: FLGLQRQGAFSV*LLLSACFLSAA
Trigger: AGCAGCAGAGAGAAAGCAAGCGCTGAGGAGGAGCCACACAGAGAACGCGCCTTGTCTCTGAAGCCCCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp GCACGCTCCAGCTGCAGGTGCCTCTCTGAGTTGATCTaGCAGACGGCATCGTACTTCTTCAGTACCTTGTCC +
Preference number: 6 (lower is better)
Translates to: ARSSCRCLSELI*QTASYFFSTLS
Trigger: GGACAAGGTACTGAAGAAGTACGATGCCGTCTGCCAGATCAACTCAGAGAGGCACCTGCAGCTGGAGCGTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp TCTTCCAGCCATTCCATCAGCTTGCTCCACGCTTCATaGAACTGCTTGGCCCTCTTCCTGGCTTCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: SSSHSISLLHAS*NCLALFLASSR
Trigger: CCTGGACGAAGCCAGGAAGAGGGCCAAGCAGTTCCATGAAGCGTGGAGCAAGCTGATGGAATGGCTGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TTCAGTGCTTGTCTGAGAAAAATACTCCGAGTAGCATaGCTGGCTGCTCTCCCTGTCCAGCGGAGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: FSACLRKILRVA*LAALPVQRSPW
Trigger: CCAGGGGCTCCGCTGGACAGGGAGAGCAGCCAGCCATGCTACTCGGAGTATTTTTCTCAGACAAGCACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp ATCCCCGTGATCACTAATTCACACTGGCGTAGCTGCTaGGCGAAGCCCTCGTCCACCAGCCCTCTATGCAAA +
Preference number: 6 (lower is better)
Translates to: IPVITNSHWRSC*AKPSSTSPLCK
Trigger: TTTGCATAGAGGGCTGGTGGACGAGGGCTTCGCCCAGCAGCTACGCCAGTGTGAATTAGTGATCACGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp GGGTGTCATAGAAATAGTCATCACTGTCACTGTCTGTaGCCGTGTCGCTCTGCTGGCCGGCCAGCAGTGACG +
Preference number: 6 (lower is better)
Translates to: GCHRNSHHCHCL*PCRSAGRPAVT
Trigger: CGTCACTGCTGGCCGGCCAGCAGAGCGACACGGCAACAGACAGTGACAGTGATGACTATTTCTATGACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 72 bp CTGCGGCTTCTACCACGAGGTCCTGAGCAAGCCTTTTaGCCTCGTCTACCTGCTGTTTCAGGGTCTGCAGTG +
Preference number: 6 (lower is better)
Translates to: LRLLPRGPEQAF*PRLPAVSGSAV
Trigger: CACTGCAGACCCTGAAACAGCAGGTAGACGAGGCAAAAAGGCTTGCTCAGGACCTCGTGGTAGAAGCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp TATTCCCTGCAATCCGTCCTGGTACTGAACGGCAGCTaGCATGGCCTCTTCCAGTCTGTCCACCCGGTCCTT +
Preference number: 6 (lower is better)
Translates to: YSLQSVLVLNGS*HGLFQSVHPVL
Trigger: AAGGACCGGGTGGACAGACTGGAAGAGGCCATGCAAGCTGCCGTTCAGTACCAGGACGGATTGCAGGGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp CTTGCAAGCATCTGCTGCCCCCTCAGCATCAGGCTCTaGTACGTCTCTTCCTTGATGGCAAAGGCGGTGCAG +
Preference number: 6 (lower is better)
Translates to: LASICCPLSIRL*YVSSLMAKAVQ
Trigger: CTGCACCGCCTTTGCCATCAAGGAAGAGACGTACAAGAGCCTGATGCTGAGGGGGCAGCAGATGCTTGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp CTGGATCCGCAGCACTTCGCATCTCTGCTGGATGGCTaGCTTCTCGCGGACTATGTTCTTGGACTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: LDPQHFASLLDG*LLADYVLGLCL
Trigger: CAGGCAGAGTCCAAGAACATAGTCCGCGAGAAGCAAGCCATCCAGCAGAGATGCGAAGTGCTGCGGATCCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp AGCCCCTGGCTGTCGGAACTGAACCTCCTTCGGAAGTaGTTCAGCAGCCCTGTGCGGCCATTTTCCTTCTGT +
Preference number: 6 (lower is better)
Translates to: SPWLSELNLLRK*FSSPVRPFSFC
Trigger: ACAGAAGGAAAATGGCCGCACAGGGCTGCTGAACAACTTCCGAAGGAGGTTCAGTTCCGACAGCCAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp CCCGTGTTCTTTCCTGATAGCAGTGTACAACTGGGTAGGGTCAGCTaGGTACTGGGGCTCTCCACCCTCATCTGCTACTCCTTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: PVFFPDSSVQLGRVS*VLGLSTLICYSLSS
Trigger: GGAGGACAAGGAGTAGCAGATGAGGGTGGAGAGCCCCAGTACCAAGCTGACCCTACCCAGTTGTACACTGCTATCAGGAAAGAACACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 90 bp CTGGGTGAGGAGATCACACAGCCCTTGGAGTTTCTCTCTGTACTCTaGCTGACGCTCTGCCACAACCTTCTGATGACCCAGCTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: LGEEITQPLEFLSVL*LTLCHNLLMTQLLL
Trigger: GAGCAGGAGCTGGGTCATCAGAAGGTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAACTCCAAGGGCTGTGTGATCTCCTCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS CAA 90 bp GCGGAAGTCTCGACGCTGTCCTTGCCGATCCTGTCACTGTCTCTCTaGCTGCAAGACTTGGCAGCGTCTATCACCCTGTTTCCGGAAATG +
Preference number: 6 (lower is better)
Translates to: AEVSTLSLPILSLSL*LQDLAASITLFPEM
Trigger: CATTTCCGGAAACAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGAGAGACAGTGACAGGATCGGCAAGGACAGCGTCGAGACTTCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TCAGGAGAGGTCTCCTCGGTGGCCAGCATCATCTTGCAGGTTCTGTaGGCGCTGTCGTTGCTCGCCATGAGGGCTTCCAGTTTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: SGEVSSVASIILQVL*ALSLLAMRASSFFK
Trigger: TTTGAAGAAACTGGAAGCCCTCATGGCGAGCAACGACAGCGCCAACAGAACCTGCAAGATGATGCTGGCCACCGAGGAGACCTCTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TTCTCCATGTCCACGGACACGCTCTTATTTTCACCAATCTGCTCCTaGATCTTCTCCACCTCGGCGGAGATGGATGGCGGCTGCCGCAGA +
Preference number: 6 (lower is better)
Translates to: FSMSTDTLLFSPICS*IFSTSAEMDGGCRR
Trigger: TCTGCGGCAGCCGCCATCCATCTCCGCCGAGGTGGAGAAGATCAAGGAGCAGATTGGTGAAAATAAGAGCGTGTCCGTGGACATGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp GACCGAGGGGTCGATTCCGGGATCCTCCAGGTCCCGGATGAAATCTaGAGTGTCTTTGATGGTAACGACCAGCGACATGTGATCGCACCA +
Preference number: 6 (lower is better)
Translates to: DRGVDSGILQVPDEI*SVFDGNDQRHVIAP
Trigger: TGGTGCGATCACATGTCGCTGGTCGTTACCATCAAAGACACTCAAGATTTCATCCGGGACCTGGAGGATCCCGGAATCGACCCCTCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp CCAGTCGAATATTCCCTGCAATCCGTCCTGGTACTGAACGGCAGCTaGCATGGCCTCTTCCAGTCTGTCCACCCGGTCCTTCCAAGCTTT +
Preference number: 6 (lower is better)
Translates to: PVEYSLQSVLVLNGS*HGLFQSVHPVLPSF
Trigger: AAAGCTTGGAAGGACCGGGTGGACAGACTGGAAGAGGCCATGCAAGCTGCCGTTCAGTACCAGGACGGATTGCAGGGAATATTCGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp GGCCGAGAAGCCACGTTCAGAGTTTGCTCAGCCTGGGTAAGCCAGTaGATGAAGTCCTGGAGGGAGTTGTGGAAGTTCATGGCCAAGTGC +
Preference number: 6 (lower is better)
Translates to: GREATFRVCSAWVSQ*MKSWRELWKFMAKC
Trigger: GCACTTGGCCATGAACTTCCACAACTCCCTCCAGGACTTCATCAACTGGCTTACCCAGGCTGAGCAAACTCTGAACGTGGCTTCTCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp CTCGGCCCTCAGCTTCTGCAGGGCGATGTCTTCCACGTTCCTCTGTaGCTTCCTCAGTTCATTTTCGGCGGCCTCCTTAACTTTCGGAAG +
Preference number: 6 (lower is better)
Translates to: LGPQLLQGDVFHVPL*LPQFIFGGLLNFRK
Trigger: CTTCCGAAAGTTAAGGAGGCCGCCGAAAATGAACTGAGGAAGCAACAGAGGAACGTGGAAGACATCGCCCTGCAGAAGCTGAGGGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp TATCCGAAGCACAGCCCTCTCGGCTGGGTCCAGCACCGAGCCCCCTaGAATCTTTCTTTTGGATCTCTCATGCTTGGGCAAATTCCAGGG +
Preference number: 6 (lower is better)
Translates to: YPKHSPLGWVQHRAP*NLSFGSLMLGQIPG
Trigger: CCCTGGAATTTGCCCAAGCATGAGAGATCCAAAAGAAAGATTCAAGGGGGCTCGGTGCTGGACCCAGCCGAGAGGGCTGTGCTTCGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
ENSMUST00000183034.5
ENSMUST00000187486.7
CDS CAA 90 bp GCGGTAGGACGCGTTCCCGGAGCTAGGCCTTCTGGTGGAAGCACCTaGAACAGAGTGATAGAATTCTGGCTGCACCCGGCTGTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: AVGRVPGARPSGGST*NRVIEFWLHPAVFL
Trigger: AAGAAAAACAGCCGGGTGCAGCCAGAATTCTATCACTCTGTTCAAGGTGCTTCCACCAGAAGGCCTAGCTCCGGGAACGCGTCCTACCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CAA 90 bp CCCAGCAGGCTGACTGACGCCCTTCTTGCCTTCTCTTTCACTGCTTaGCCGCACCGGCTCGGTGTCATCTACAACTTTTTGGCAAGGCTT +
Preference number: 6 (lower is better)
Translates to: PSRLTDALLAFSFTA*PHRLGVIYNFLARL
Trigger: AAGCCTTGCCAAAAAGTTGTAGATGACACCGAGCCGGTGCGGCAAAGCAGTGAAAGAGAAGGCAAGAAGGGCGTCAGTCAGCCTGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS TCA 72 bp CAGCAGTATCTCAAGCACTCGGATGGCCATGGATTCTaGGACCATGCCCTGAGCCAGAGAATCAAGCACGGG +
Preference number: 6 (lower is better)
Translates to: QQYLKHSDGHGF*DHALSQRIKHG
Trigger: CCCGTGCTTGATTCTCTGGCTCAGGGCATGGTCTCAGAATCCATGGCCATCCGAGTGCTTGAGATACTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp TCGAGTGCACGATTCCACCCGTCTGAACCTGGTAAGTaGGGATGCTGCTTGCGGTGTCTCTGTCAATCACCC +
Preference number: 6 (lower is better)
Translates to: SSARFHPSEPGK*GCCLRCLCQSP
Trigger: GGGTGATTGACAGAGACACCGCAAGCAGCATCCTCACTTACCAGGTTCAGACGGGTGGAATCGTGCACTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp GCTTCTCACCTCCTGGCAGTGCTGCTATGTGCACACTaGAGGGTTCTACCTCGGCTTCTCCTACAGCTTGTG +
Preference number: 6 (lower is better)
Translates to: ASHLLAVLLCAH*RVLPRLLLQLV
Trigger: CACAAGCTGTAGGAGAAGCCGAGGTAGAACCCTTCAGTGTGCACATAGCAGCACTGCCAGGAGGTGAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp GACCTGAAGCGGTCTGTAACCTGGTCCAGTTTGGTCTaGACTTCTCTGTGGGTTGCGGAAGTCTCGACGCTG +
Preference number: 6 (lower is better)
Translates to: DLKRSVTWSSLV*TSLWVAEVSTL
Trigger: CAGCGTCGAGACTTCCGCAACCCACAGAGAAGTTCAGACCAAACTGGACCAGGTTACAGACCGCTTCAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp AGAATGCCCTGGCCAGCCGCTGTGAGCTGTTCATACTaGGGTTTCCGGGTGTCGAACTCTTGCAGCAGAATC +
Preference number: 6 (lower is better)
Translates to: RMPWPAAVSCSY*GFRVSNSCSRI
Trigger: GATTCTGCTGCAAGAGTTCGACACCCGGAAACCTCAGTATGAACAGCTCACAGCGGCTGGCCAGGGCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp CGTCTCCGCTTGCAACAACACATCAGAGGTTCCCTTTaGGTCTGCGGCTTCTACCACGAGGTCCTGAGCAAG +
Preference number: 6 (lower is better)
Translates to: RLRLQQHIRGSL*VCGFYHEVLSK
Trigger: CTTGCTCAGGACCTCGTGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGATGTGTTGTTGCAAGCGGAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp CCACGGACACGCTCTTATTTTCACCAATCTGCTCCTTaGTCTTCTCCACCTCGGCGGAGATGGATGGCGGCT +
Preference number: 6 (lower is better)
Translates to: PRTRSYFHQSAP*SSPPRRRWMAA
Trigger: AGCCGCCATCCATCTCCGCCGAGGTGGAGAAGATCAAGGAGCAGATTGGTGAAAATAAGAGCGTGTCCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 72 bp GTGCTAAGAGAGCACCCTCGAGCTTGTGCTGTCTGCTaGCAATTCGCTCGTCCAGGCTGTCCCAGATCAACT +
Preference number: 6 (lower is better)
Translates to: VLREHPRACAVC*QFARPGCPRST
Trigger: AGTTGATCTGGGACAGCCTGGACGAGCGAATTGTCAGCAGACAGCACAAGCTCGAGGGTGCTCTCTTAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 72 bp GCCCCCTCAGCATCAGGCTCTTGTACGTCTCTTCCTTaGTGGCAAAGGCGGTGCAGACTTCCATATGTGCGT +
Preference number: 6 (lower is better)
Translates to: APSASGSCTSLP*WQRRCRLPYVR
Trigger: ACGCACATATGGAAGTCTGCACCGCCTTTGCCATCAAGGAAGAGACGTACAAGAGCCTGATGCTGAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 72 bp TCACACAGCCCTTGGAGTTTCTCTCTGTACTCTTGCTaGCGCTCTGCCACAACCTTCTCCGGGACCTTCGAC +
Preference number: 6 (lower is better)
Translates to: SHSPWSFSLYSC*RSATTFSGTFD
Trigger: GTCGAAGGTCCCGGAGAAGGTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAACTCCAAGGGCTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097786.10
ENSMUST00000185269.7
CDS TCA 72 bp TTTCTGGAGGGACACGGACGCCTCTCACAGGGTCAATaGCGCCCCCACTGGCAATTTGTGCCTCCAAGATAT +
Preference number: 6 (lower is better)
Translates to: FLEGHGRLSQGQ*RPHWQFVPPRY
Trigger: ATATCTTGGAGGCACAAATTGCCAGTGGGGGCGTCATTGACCCTGTGAGAGGCGTCCGTGTCCCTCCAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp ACAGCCCTCTCGGCTGGGTCCAGCACCGAGCCCCCTTaGATCTTTCTTTTGGATCTCTCATGCTTGGGCAAA +
Preference number: 6 (lower is better)
Translates to: TALSAGSSTEPP*IFLLDLSCLGK
Trigger: TTTGCCCAAGCATGAGAGATCCAAAAGAAAGATTCAAGGGGGCTCGGTGCTGGACCCAGCCGAGAGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
ENSMUST00000183034.5
ENSMUST00000187486.7
CDS GCA 72 bp GCAAAGTTCTCCGAGCTTCTCACCTCCTGGCAGTGCTaGTATGTGCACACTGAAGGGTTCTACCTCGGCTTC +
Preference number: 6 (lower is better)
Translates to: AKFSELLTSWQC*YVHTEGFYLGF
Trigger: GAAGCCGAGGTAGAACCCTTCAGTGTGCACATAGCAGCACTGCCAGGAGGTGAGAAGCTCGGAGAACTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp CCCTTGGAGTTTCTCTCTGTACTCTTGCTGACGCTCTaGCACAACCTTCTGATGACCCAGCTCCTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: PLEFLSVLLLTL*HNLLMTQLLLQ
Trigger: CTGGAGCAGGAGCTGGGTCATCAGAAGGTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAACTCCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS GCA 72 bp CGACGCTGTCCTTGCCGATCCTGTCACTGTCTCTCTTaGTGCAAGACTTGGCAGCGTCTATCACCCTGTTTC +
Preference number: 6 (lower is better)
Translates to: RRCPCRSCHCLS*CKTWQRLSPCF
Trigger: GAAACAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGAGAGACAGTGACAGGATCGGCAAGGACAGCGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp CTTCTCTGTGGGTTGCGGAAGTCTCGACGCTGTCCTTaGCGATCCTGTCACTGTCTCTCTTGCTGCAAGACT +
Preference number: 6 (lower is better)
Translates to: LLCGLRKSRRCP*RSCHCLSCCKT
Trigger: AGTCTTGCAGCAAGAGAGACAGTGACAGGATCGGCAAGGACAGCGTCGAGACTTCCGCAACCCACAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp AACCTGGTCCAGTTTGGTCTGAACTTCTCTGTGGGTTaGGGAAGTCTCGACGCTGTCCTTGCCGATCCTGTC +
Preference number: 6 (lower is better)
Translates to: NLVQFGLNFSVG*GSLDAVLADPV
Trigger: GACAGGATCGGCAAGGACAGCGTCGAGACTTCCGCAACCCACAGAGAAGTTCAGACCAAACTGGACCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp AGCTACCACCGAGATCCCTTCCAGTTGACGGTTCCTTaGTTCAGCTCTGCTCAGGAGCGCTTCCCATCTACT +
Preference number: 6 (lower is better)
Translates to: SYHRDPFQLTVP*FSSAQERFPST
Trigger: AGTAGATGGGAAGCGCTCCTGAGCAGAGCTGAAGCAAGGAACCGTCAACTGGAAGGGATCTCGGTGGTAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp ATGTGTGGCTTGTGCTCGGCTATCAGTTCTCGAAGTTaGCGGTGCTCCTCTTGCTGTCTCCTCAGAGTCTCG +
Preference number: 6 (lower is better)
Translates to: MCGLCSAISSRS*RCSSCCLLRVS
Trigger: CGAGACTCTGAGGAGACAGCAAGAGGAGCACCGGCAACTTCGAGAACTGATAGCCGAGCACAAGCCACACAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp TCCTCTCCCCTCTGCCTCAGAGTCTCGTATAGCGGCTaGAGCTTCTCCATGTCCACGGACACGCTCTTATTT +
Preference number: 6 (lower is better)
Translates to: SSPLCLRVSYSG*SFSMSTDTLLF
Trigger: AAATAAGAGCGTGTCCGTGGACATGGAGAAGCTGCAGCCGCTATACGAGACTCTGAGGCAGAGGGGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp CACCAAGTCAATGTCCCCGTGGACAGGCTGGTCTTCTaGCAGCTGGGGCTCAACTCGATACAGCCAATCAAT +
Preference number: 6 (lower is better)
Translates to: HQVNVPVDRLVF*QLGLNSIQPIN
Trigger: ATTGATTGGCTGTATCGAGTTGAGCCCCAGCTGGCAGAAGACCAGCCTGTCCACGGGGACATTGACTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp CGCTTTCGTTGCAGTTCTTCCACCAGGGCCCGTTTCTaGTGTTCCAGATCACTGAGGCTCGAGTCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: RFRCSSSTRARF*CSRSLRLESFL
Trigger: GAGGAAAGACTCGAGCCTCAGTGATCTGGAACAGCAGAAACGGGCCCTGGTGGAAGAACTGCAACGAAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp ATCTGCTCTTCGATGGTCTTCAGGTGCAGCTCGTCTTaGACCCTCTTCAGCCTGTCATTCAGCTCCTGCACC +
Preference number: 6 (lower is better)
Translates to: ICSSMVFRCSSS*TLFSLSFSSCT
Trigger: GGTGCAGGAGCTGAATGACAGGCTGAAGAGGGTGCAAGACGAGCTGCACCTGAAGACCATCGAAGAGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp CCGCGGACAGCAGTATCTCAAGCACTCGGATGGCCATaGATTCTGAGACCATGCCCTGAGCCAGAGAATCAA +
Preference number: 6 (lower is better)
Translates to: PRTAVSQALGWP*ILRPCPEPENQ
Trigger: TTGATTCTCTGGCTCAGGGCATGGTCTCAGAATCCATGGCCATCCGAGTGCTTGAGATACTGCTGTCCGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp AGCCTACCCCATCGGTATCAGACTGGCTTTCTCGGCTaGTGTCACACTCTTCTCTGTCCCCTCTCCAATGAC +
Preference number: 6 (lower is better)
Translates to: SLPHRYQTGFLG*CHTLLCPLSND
Trigger: GTCATTGGAGAGGGGACAGAGAAGAGTGTGACACCAGCCGAGAAAGCCAGTCTGATACCGATGGGGTAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp TCTGTGTCCCAACCTCCCCTACCAGCTGACTCTGGCTaGAAAACACCTGCACCATGCTGCGTTTCTAACGGA +
Preference number: 6 (lower is better)
Translates to: SVSQPPLPADSG*KTPAPCCVSNG
Trigger: TCCGTTAGAAACGCAGCATGGTGCAGGTGTTTTCCAGCCAGAGTCAGCTGGTAGGGGAGGTTGGGACACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp GCGTCCTGCACACTCAGGGAGCGGGTCAGAGTGATCTaGAGCTTTTCATTCCGTTCGTTCACACACTTGGAC +
Preference number: 6 (lower is better)
Translates to: ASCTLRERVRVI*SFSFRSFTHLD
Trigger: GTCCAAGTGTGTGAACGAACGGAATGAAAAGCTCCAGATCACTCTGACCCGCTCCCTGAGTGTGCAGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GTCTGTGGGACGGTCTCCACGTCTGAGCACACAGACTaGATTTCTGAAATGTCAAAGTCGGACGCGTCGCTG +
Preference number: 6 (lower is better)
Translates to: VCGTVSTSEHTD*ISEMSKSDASL
Trigger: CAGCGACGCGTCCGACTTTGACATTTCAGAAATCCAGTCTGTGTGCTCAGACGTGGAGACCGTCCCACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GTTTACCATAATTGCGTGTTAAAGGATGGAGAATCTTaGGTGTGCTGGCGGCAGCAGGCACCGGTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: VYHNCVLKDGES*VCWRQQAPVGR
Trigger: CCTCCCCACCGGTGCCTGCTGCCGCCAGCACACCCAAGATTCTCCATCCTTTAACACGCAATTATGGTAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CCA 72 bp CTGAAGTTTGAGAGTTGGTACCCCATCTGCACTTGCTaGCCTTCGCGACAGCATCTGACGCGTCTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: LKFESWYPICTC*PSRQHLTRLKA
Trigger: AGCCTTCAGACGCGTCAGATGCTGTCGCGAAGGCCAGCAAGTGCAGATGGGGTACCAACTCTCAAACTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CAA 72 bp ACTTCTCTGTGGGTTGCGGAAGTCTCGACGCTGTCCTaGCCGATCCTGTCACTGTCTCTCTTGCTGCAAGAC +
Preference number: 6 (lower is better)
Translates to: TSLWVAEVSTLS*PILSLSLLLQD
Trigger: GTCTTGCAGCAAGAGAGACAGTGACAGGATCGGCAAGGACAGCGTCGAGACTTCCGCAACCCACAGAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp CTGGTTTTCGCCCGGTCCAGCAGCTTGTTGCACTGCTaGCTCAAGGCTTCTAAGTCCCTCTTGACTCCGATG +
Preference number: 6 (lower is better)
Translates to: LVFARSSSLLHC*LKASKSLLTPM
Trigger: CATCGGAGTCAAGAGGGACTTAGAAGCCTTGAGCAAGCAGTGCAACAAGCTGCTGGACCGGGCGAAAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp TCTCCTCCAACGGGTTTCTGTTCACTTAGCAAGCCTTaGGTGTGTGTCAGCCATGCGAGGAGCTCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: SPPTGFCSLSKP*VCVSHARSSSR
Trigger: CCTGGACGAGCTCCTCGCATGGCTGACACACACCAAAGGCTTGCTAAGTGAACAGAAACCCGTTGGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp CACTGTTGCAAATCTTCGATTTCACCGTGGAACCCTTaGGCCTGGCGCAAGGCGCTGTCCAGCTGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: HCCKSSISPWNP*AWRKALSSCCF
Trigger: AAAGCAGCAGCTGGACAGCGCCTTGCGCCAGGCCAAAGGGTTCCACGGTGAAATCGAAGATTTGCAACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp CATCTGCTCTTCGATGGTCTTCAGGTGCAGCTCGTCTaGCACCCTCTTCAGCCTGTCATTCAGCTCCTGCAC +
Preference number: 6 (lower is better)
Translates to: HLLFDGLQVQLV*HPLQPVIQLLH
Trigger: GTGCAGGAGCTGAATGACAGGCTGAAGAGGGTGCAAGACGAGCTGCACCTGAAGACCATCGAAGAGCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp AAGACCGATTTCATCGGATGTCTCCCTTTCTGGAGCTaGCGGTGCCAGCAGCAGAAGAAGACGATGGTGGCG +
Preference number: 6 (lower is better)
Translates to: KTDFIGCLPFWS*RCQQQKKTMVA
Trigger: CGCCACCATCGTCTTCTTCTGCTGCTGGCACCGCAAGCTCCAGAAAGGGAGACATCCGATGAAATCGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CAA 72 bp GTCCGGTCTGTGAAATGCCTAGAAGACAGGCTGCCTTaGGACCCGGAGTCTATCTGTTCGTTCAGCCTCACC +
Preference number: 6 (lower is better)
Translates to: VRSVKCLEDRLP*DPESICSFSLT
Trigger: GGTGAGGCTGAACGAACAGATAGACTCCGGGTCCAAAGGCAGCCTGTCTTCTAGGCATTTCACAGACCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CAA 90 bp TCCTCGGTGGCCAGCATCATCTTGCAGGTTCTGTTGGCGCTGTCGTaGCTCGCCATGAGGGCTTCCAGTTTCTTCAAAAAGGTCTGCATG +
Preference number: 6 (lower is better)
Translates to: SSVASIILQVLLALS*LAMRASSFFKKVCM
Trigger: CATGCAGACCTTTTTGAAGAAACTGGAAGCCCTCATGGCGAGCAACGACAGCGCCAACAGAACCTGCAAGATGATGCTGGCCACCGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp GAAACTCCTGAGCTACCACCGAGATCCCTTCCAGTTGACGGTTCCTaGCTTCAGCTCTGCTCAGGAGCGCTTCCCATCTACTGTCCAAGA +
Preference number: 6 (lower is better)
Translates to: ETPELPPRSLPVDGS*LQLCSGALPIYCPR
Trigger: TCTTGGACAGTAGATGGGAAGCGCTCCTGAGCAGAGCTGAAGCAAGGAACCGTCAACTGGAAGGGATCTCGGTGGTAGCTCAGGAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp AGCATCTGCTGCCCCCTCAGCATCAGGCTCTTGTACGTCTCTTCCTaGATGGCAAAGGCGGTGCAGACTTCCATATGTGCGTTAAGCTGC +
Preference number: 6 (lower is better)
Translates to: SICCPLSIRLLYVSS*MAKAVQTSICALSC
Trigger: GCAGCTTAACGCACATATGGAAGTCTGCACCGCCTTTGCCATCAAGGAAGAGACGTACAAGAGCCTGATGCTGAGGGGGCAGCAGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp ACGGATTCCCACTTCTCTTTCAGGTTGGTGATGTCTTGGTCAATGTaGGTCTCCGCAGATCGGGGACACCTTGCAAGCATCTGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: TDSHFSFRLVMSWSM*VSADRGHLASICCP
Trigger: GGGGCAGCAGATGCTTGCAAGGTGTCCCCGATCTGCGGAGACCAACATTGACCAAGACATCACCAACCTGAAAGAGAAGTGGGAATCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp CCGCTCAAGCTCTCGAATGTTGGTCTCCCACAGCTTCGCGTTCTCTaGCGCCCGGAAGTTTTCTCTCTGGAGAGACACAAAGTCGTGCTT +
Preference number: 6 (lower is better)
Translates to: PLKLSNVGLPQLRVL*RPEVFSLERHKVVL
Trigger: AAGCACGACTTTGTGTCTCTCCAGAGAGAAAACTTCCGGGCGCAAGAGAACGCGAAGCTGTGGGAGACCAACATTCGAGAGCTTGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp AGGGCAGTGTACCGTGTCCGTAGGTCCATGAACTCTTaGATAACGAGGTCTGCTGAGCTCTGTATCCGCCGT +
Preference number: 6 (lower is better)
Translates to: RAVYRVRRSMNS*ITRSAELCIRR
Trigger: ACGGCGGATACAGAGCTCAGCAGACCTCGTTATTCAAGAGTTCATGGACCTACGGACACGGTACACTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 72 bp ATGATGTGGGAAATATTTCACCAGAGTGGGGCCAGATaGGTCCAACGTAGCCCCGCTGAGCCTCCAGAACCA +
Preference number: 6 (lower is better)
Translates to: MMWEIFHQSGAR*VQRSPAEPPEP
Trigger: TGGTTCTGGAGGCTCAGCGGGGCTACGTTGGACTCATCTGGCCCCACTCTGGTGAAATATTTCCCACATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp CCAAAGCGTCCTGCACACTCAGGGAGCGGGTCAGAGTaGTCTGGAGCTTTTCATTCCGTTCGTTCACACACT +
Preference number: 6 (lower is better)
Translates to: PKRPAHSGSGSE*SGAFHSVRSHT
Trigger: AGTGTGTGAACGAACGGAATGAAAAGCTCCAGATCACTCTGACCCGCTCCCTGAGTGTGCAGGACGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp GTTGTCTGCTCAGTTCTGCTTTCAAGTACTCCTCTTTaGCCAGTGCCGACAGGTCCTCACAGACCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: VVCSVLLSSTPL*PVPTGPHRPPG
Trigger: CCCAGGAGGTCTGTGAGGACCTGTCGGCACTGGTCAAAGAGGAGTACTTGAAAGCAGAACTGAGCAGACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp GTTCCCTTTGAGTCTGCGGCTTCTACCACGAGGTCCTaGGCAAGCCTTTTTGCCTCGTCTACCTGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: VPFESAASTTRS*ASLFASSTCCF
Trigger: GAAACAGCAGGTAGACGAGGCAAAAAGGCTTGCTCAGGACCTCGTGGTAGAAGCCGCAGACTCAAAGGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp TGGGCTCCGAGTTTGCCAGCTTCTTTTCTACAGCTGTaGGCCACTCGTTCAGTGGCTCCAGGGTCTCATGAA +
Preference number: 6 (lower is better)
Translates to: WAPSLPASFLQL*ATRSVAPGSHE
Trigger: TTCATGAGACCCTGGAGCCACTGAACGAGTGGCTCACAGCTGTAGAAAAGAAGCTGGCAAACTCGGAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 72 bp TCCAGATCACTGAGGCTCGAGTCTTTCCTCCGCAGATaGTCTTCCAGCGTCTGCCTGGTGAAGGTGTTTTCC +
Preference number: 6 (lower is better)
Translates to: SRSLRLESFLRR*SSSVCLVKVFS
Trigger: GGAAAACACCTTCACCAGGCAGACGCTGGAAGATCATCTGCGGAGGAAAGACTCGAGCCTCAGTGATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp CTCCAGGAGCCGGAGATGCTGAGCCAGATTTCTGGCTaGAATCATCCTCGTCAGAAAAATCCGCAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: LQEPEMLSQISG*NHPRQKNPQRR
Trigger: CCTCCTCTGCGGATTTTTCTGACGAGGATGATTTCAGCCAGAAATCTGGCTCAGCATCTCCGGCTCCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
ENSMUST00000183034.5
ENSMUST00000187486.7
CDS TCA 72 bp TCCTCCATGGACTCCTGGACAAGGTCTTCCAGTTTGTaGATGCTGCTGGACCTGTCACAGCTGTACTTGCGC +
Preference number: 6 (lower is better)
Translates to: SSMDSWTRSSSL*MLLDLSQLYLR
Trigger: GCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185897.7
CDS GCA 72 bp TGGACTCCTGGACAAGGTCTTCCAGTTTGTGAATGCTaGTGGACCTGTCACAGCTGTACTTGCGCTGGATGG +
Preference number: 6 (lower is better)
Translates to: WTPGQGLPVCEC*WTCHSCTCAGW
Trigger: CCATCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 72 bp CCATGGACTCCTGGACAAGGTCTTCCAGTTTGTGAATaGTGCTGGACCTGTCACAGCTGTACTTGCGCTGGA +
Preference number: 6 (lower is better)
Translates to: PWTPGQGLPVCE*CWTCHSCTCAG
Trigger: TCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 72 bp GACGTGAACGCTCTGCCACCTTTCGACAAGCTGGTCTaGCTTTTCTTTGTGCCAGTCAAAGTCAAGGTCCCG +
Preference number: 6 (lower is better)
Translates to: DVNALPPFDKLV*LFFVPVKVKVP
Trigger: CGGGACCTTGACTTTGACTGGCACAAAGAAAAGGCAGACCAGCTTGTCGAAAGGTGGCAGAGCGTTCACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 72 bp CAGCGCGCTGCTGGAAGTTATCAACTCACACTGTACTaGTTCGTCCACAGTCAGTCGCTTAGCAGGGTTCGA +
Preference number: 6 (lower is better)
Translates to: QRAAGSYQLTLY*FVHSQSLSRVR
Trigger: TCGAACCCTGCTAAGCGACTGACTGTGGACGAAGCAGTACAGTGTGAGTTGATAACTTCCAGCAGCGCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp TATGTGACAGTGGGCCACAATCTGATGTGTTGTCATTaGGGGAACCACCCCCAGGGACCATGGTACAGGAGT +
Preference number: 6 (lower is better)
Translates to: YVTVGHNLMCCH*GNHPQGPWYRS
Trigger: ACTCCTGTACCATGGTCCCTGGGGGTGGTTCCCGCAATGACAACACATCAGATTGTGGCCCACTGTCACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp ATCCAGATGTACTTTCTGAATGCTCTGGGGGCTCGCTaGAAAGTTCTCCGAGCTTCTCACCTCCTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: IQMYFLNALGAR*KVLRASHLLAV
Trigger: CACTGCCAGGAGGTGAGAAGCTCGGAGAACTTTGCAGCGAGCCCCCAGAGCATTCAGAAAGTACATCTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp AGGAAGCAGCGAGCCCTTGGCATCCAAGAGTACCTCTaGGGTTTTCTTCAGCTTCTCTACAGCAACCTGCTG +
Preference number: 6 (lower is better)
Translates to: RKQRALGIQEYL*GFLQLLYSNLL
Trigger: CAGCAGGTTGCTGTAGAGAAGCTGAAGAAAACCGCAGAGGTACTCTTGGATGCCAAGGGCTCGCTGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp CAGCTGCCTCGTGAGCTTCACTCTGTCCGCAGGCTCTaGCGAAGCAGCGATTTTCTCTCCTTCTCTTTTGAT +
Preference number: 6 (lower is better)
Translates to: QLPRELHSVRRL*RSSDFLSFSFD
Trigger: ATCAAAAGAGAAGGAGAGAAAATCGCTGCTTCGGCAGAGCCTGCGGACAGAGTGAAGCTCACGAGGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp CAGCTTTGGTGCCTGGGTTCCTATGGGCTCCGAGTTTaGCAGCTTCTTTTCTACAGCTGTGAGCCACTCGTT +
Preference number: 6 (lower is better)
Translates to: QLWCLGSYGLRV*QLLFYSCEPLV
Trigger: AACGAGTGGCTCACAGCTGTAGAAAAGAAGCTGGCAAACTCGGAGCCCATAGGAACCCAGGCACCAAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp TTCCTGTGGGTCATCTGCTCTTCGATGGTCTTCAGGTaGAGCTCGTCTTGCACCCTCTTCAGCCTGTCATTC +
Preference number: 6 (lower is better)
Translates to: FLWVICSSMVFR*SSSCTLFSLSF
Trigger: GAATGACAGGCTGAAGAGGGTGCAAGACGAGCTGCACCTGAAGACCATCGAAGAGCAGATGACCCACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp TCTTCCTGGAGCAGGATCATCTTCCTGTGGGTCATCTaGTCTTCGATGGTCTTCAGGTGCAGCTCGTCTTGC +
Preference number: 6 (lower is better)
Translates to: SSWSRIIFLWVI*SSMVFRCSSSC
Trigger: GCAAGACGAGCTGCACCTGAAGACCATCGAAGAGCAGATGACCCACAGGAAGATGATCCTGCTCCAGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp GGATTAGGAAAGACTCTCGTGTTGCTGGACGGTTCATaGAGGAACTGTAGGACGGCGTTGTTCAGCAAGCCC +
Preference number: 6 (lower is better)
Translates to: GLGKTLVLLDGS*RNCRTALFSKP
Trigger: GGGCTTGCTGAACAACGCCGTCCTACAGTTCCTGCATGAACCGTCCAGCAACACGAGAGTCTTTCCTAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp GGAGATTCGCTCCCCACTAGCGGTCAGCCAATAGCCTaGAATGGGACTGTGCAAATCCTTCTTGGGAACTAC +
Preference number: 6 (lower is better)
Translates to: GDSLPTSGQPIA*NGTVQILLGNY
Trigger: GTAGTTCCCAAGAAGGATTTGCACAGTCCCATTGCAGGCTATTGGCTGACCGCTAGTGGGGAGCGAATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp CTTCTGAAGTTTGAGAGTTGGTACCCCATCTGCACTTaGTGGCCTTCGCGACAGCATCTGACGCGTCTGAAG +
Preference number: 6 (lower is better)
Translates to: LLKFESWYPICT*WPSRQHLTRLK
Trigger: CTTCAGACGCGTCAGATGCTGTCGCGAAGGCCAGCAAGTGCAGATGGGGTACCAACTCTCAAACTTCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CCA 72 bp CCACACTCCGGTACTGCAGGAGCTCCTCCTTTTCCATaGACTCCTGGACAAGGTCTTCCAGTTTGTGAATGC +
Preference number: 6 (lower is better)
Translates to: PHSGTAGAPPFP*TPGQGLPVCEC
Trigger: GCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGGAAAAGGAGGAGCTCCTGCAGTACCGGAGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000187486.7
CDS CCA 72 bp ATAGCAGTGTACAACTGGGTAGGGTCAGCTTGGTACTaGGGCTCTCCACCCTCATCTGCTACTCCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: IAVYNWVGSAWY*GSPPSSATPCP
Trigger: AGGACAAGGAGTAGCAGATGAGGGTGGAGAGCCCCAGTACCAAGCTGACCCTACCCAGTTGTACACTGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp TTCCTGATAGCAGTGTACAACTGGGTAGGGTCAGCTTaGTACTGGGGCTCTCCACCCTCATCTGCTACTCCT +
Preference number: 6 (lower is better)
Translates to: FLIAVYNWVGSA*YWGSPPSSATP
Trigger: AGGAGTAGCAGATGAGGGTGGAGAGCCCCAGTACCAAGCTGACCCTACCCAGTTGTACACTGCTATCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp ATCTTTCCGTGCTGGGCCTTGACTTTCTCATACTGCTaGTTCAGATTCCCCTTCGTGGCCTCACTGTGCCCT +
Preference number: 6 (lower is better)
Translates to: IFPCWALTFSYC*FRFPFVASLCP
Trigger: AGGGCACAGTGAGGCCACGAAGGGGAATCTGAACCAGCAGTATGAGAAAGTCAAGGCCCAGCACGGAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp AACTTCACAGACTCAGTGTCTGCAGGTGTAGGTGTCTaGCGCCACCTGCTGGCCGTCTTGTTCATCTTCTCT +
Preference number: 6 (lower is better)
Translates to: NFTDSVSAGVGV*RHLLAVLFIFS
Trigger: AGAGAAGATGAACAAGACGGCCAGCAGGTGGCGCCAGACACCTACACCTGCAGACACTGAGTCTGTGAAGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TGGTTGATTGTCTCGGTTTCTGTACCTACGGGGCCCTaGGACTCTTCGTGTTCTTCAGCCTTCTGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: WLIVSVSVPTGP*DSSCSSAFWSR
Trigger: TCTGCTCCAGAAGGCTGAAGAACACGAAGAGTCCCAGGGCCCCGTAGGTACAGAAACCGAGACAATCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TTATCGATCAGGTTCATCACCAAGTCAATGTCCCCGTaGACAGGCTGGTCTTCTGCCAGCTGGGGCTCAACT +
Preference number: 6 (lower is better)
Translates to: LSIRFITKSMSP*TGWSSASWGST
Trigger: AGTTGAGCCCCAGCTGGCAGAAGACCAGCCTGTCCACGGGGACATTGACTTGGTGATGAACCTGATCGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TTGCTCAATGAGAGTCCGGAGAGCATCCTCATCATCTaGGAGAGCACCATGGAAACGCAGGGTTTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: LLNESPESILII*ESTMETQGLLC
Trigger: GCAGAGCAAACCCTGCGTTTCCATGGTGCTCTCCCAGATGATGAGGATGCTCTCCGGACTCTCATTGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GCACGCCTGGTTAAGGTCAAGGCTCGGGGAAGCCTCTaGCTCTACGCTTTTCTTAAGGAAATCTCCCTTGAG +
Preference number: 6 (lower is better)
Translates to: ARLVKVKARGSL*LYAFLKEISLE
Trigger: CTCAAGGGAGATTTCCTTAAGAAAAGCGTAGAGCCAGAGGCTTCCCCGAGCCTTGACCTTAACCAGGCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp CCCGAAAAGACCGATTTCATCGGATGTCTCCCTTTCTaGAGCTTGCGGTGCCAGCAGCAGAAGAAGACGATG +
Preference number: 6 (lower is better)
Translates to: PEKTDFIGCLPF*SLRCQQQKKTM
Trigger: CATCGTCTTCTTCTGCTGCTGGCACCGCAAGCTCCAGAAAGGGAGACATCCGATGAAATCGGTCTTTTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CAA 72 bp CTGCTGGGACTCCACCATAGCCCTGTAGGTCATTGTTaGCAACTCATAGTCCTTGACGGCAGCCGAGTACTG +
Preference number: 6 (lower is better)
Translates to: LLGLHHSPVGHC*QLIVLDGSRVL
Trigger: CAGTACTCGGCTGCCGTCAAGGACTATGAGTTGCAAACAATGACCTACAGGGCTATGGTGGAGTCCCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CAA 72 bp TTGCGGGAACCACCCCCAGGGACCATGGTACAGGAGTaGTCTTCCACCTTAGACCCAGTTTTCTCTGACTCA +
Preference number: 6 (lower is better)
Translates to: LREPPPGTMVQE*SSTLDPVFSDS
Trigger: TGAGTCAGAGAAAACTGGGTCTAAGGTGGAAGACAACTCCTGTACCATGGTCCCTGGGGGTGGTTCCCGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 72 bp GCTCCTTTATGTGACAGTGGGCCACAATCTGATGTGTaGTCATTGCGGGAACCACCCCCAGGGACCATGGTA +
Preference number: 6 (lower is better)
Translates to: APLCDSGPQSDV*SLREPPPGTMV
Trigger: TACCATGGTCCCTGGGGGTGGTTCCCGCAATGACAACACATCAGATTGTGGCCCACTGTCACATAAAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 72 bp TTTCCTGATAGCAGTGTACAACTGGGTAGGGTCAGCTaGGTACTGGGGCTCTCCACCCTCATCTGCTACTCC +
Preference number: 6 (lower is better)
Translates to: FPDSSVQLGRVS*VLGLSTLICYS
Trigger: GGAGTAGCAGATGAGGGTGGAGAGCCCCAGTACCAAGCTGACCCTACCCAGTTGTACACTGCTATCAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 72 bp GCGGTTTTCAGTCTGGGTGAGGAGATCACACAGCCCTaGGAGTTTCTCTCTGTACTCTTGCTGACGCTCTGC +
Preference number: 6 (lower is better)
Translates to: AVFSLGEEITQP*EFLSVLLLTLC
Trigger: GCAGAGCGTCAGCAAGAGTACAGAGAGAAACTCCAAGGGCTGTGTGATCTCCTCACCCAGACTGAAAACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp TCGACGCTGTCCTTGCCGATCCTGTCACTGTCTCTCTaGCTGCAAGACTTGGCAGCGTCTATCACCCTGTTT +
Preference number: 6 (lower is better)
Translates to: STLSLPILSLSL*LQDLAASITLF
Trigger: AAACAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGAGAGACAGTGACAGGATCGGCAAGGACAGCGTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp ATCCAGTCGCATCTGTCCCTCAGTTGTCCTGTTAGGTaGTCCCACTTCTGGGTCACAGCTTCCAGTTGCTCG +
Preference number: 6 (lower is better)
Translates to: IQSHLSLSCPVR*SHFWVTASSCS
Trigger: CGAGCAACTGGAAGCTGTGACCCAGAAGTGGGACAACCTAACAGGACAACTGAGGGACAGATGCGACTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp ACGTCTCCGCTTGCAACAACACATCAGAGGTTCCCTTaGAGTCTGCGGCTTCTACCACGAGGTCCTGAGCAA +
Preference number: 6 (lower is better)
Translates to: TSPLATTHQRFP*SLRLLPRGPEQ
Trigger: TTGCTCAGGACCTCGTGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGATGTGTTGTTGCAAGCGGAGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp TTGTTGCACTGCTTGCTCAAGGCTTCTAAGTCCCTCTaGACTCCGATGAGGTCAGGAGAGGTCTCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: LLHCLLKASKSL*TPMRSGEVSSV
Trigger: CACCGAGGAGACCTCTCCTGACCTCATCGGAGTCAAGAGGGACTTAGAAGCCTTGAGCAAGCAGTGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp GGCCTTCACTACTTTGAACTCAGCGGACGGAGGCTTTaGATTGGCCACAAGCTCCTCTGTGTCTGCCATCCA +
Preference number: 6 (lower is better)
Translates to: GLHYFELSGRRL*IGHKLLCVCHP
Trigger: TGGATGGCAGACACAGAGGAGCTTGTGGCCAATCAAAAGCCTCCGTCCGCTGAGTTCAAAGTAGTGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp TATGTGTGGCTTGTGCTCGGCTATCAGTTCTCGAAGTaGCCGGTGCTCCTCTTGCTGTCTCCTCAGAGTCTC +
Preference number: 6 (lower is better)
Translates to: YVWLVLGYQFSK*PVLLLLSPQSL
Trigger: GAGACTCTGAGGAGACAGCAAGAGGAGCACCGGCAACTTCGAGAACTGATAGCCGAGCACAAGCCACACATA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp GCGGTGCAGACTTCCATATGTGCGTTAAGCTGCTCCTaGGCTGTCTCTGGGAGACCTCCCAGAGGTTTAGAT +
Preference number: 6 (lower is better)
Translates to: AVQTSICALSCS*AVSGRPPRGLD
Trigger: ATCTAAACCTCTGGGAGGTCTCCCAGAGACAGCCAAGGAGCAGCTTAACGCACATATGGAAGTCTGCACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp GAGATCACACAGCCCTTGGAGTTTCTCTCTGTACTCTaGCTGACGCTCTGCCACAACCTTCTCCGGGACCTT +
Preference number: 6 (lower is better)
Translates to: EITQPLEFLSVL*LTLCHNLLRDL
Trigger: AAGGTCCCGGAGAAGGTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAACTCCAAGGGCTGTGTGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097786.10
ENSMUST00000185269.7
CDS CAA 72 bp CAGCTTCTGCAGGGCGATGTCTTCCACGTTCCTCTGTaGCTTCCTCAGTTCATTTTCGGCGGCCTCCTTAAC +
Preference number: 6 (lower is better)
Translates to: QLLQGDVFHVPL*LPQFIFGGLLN
Trigger: GTTAAGGAGGCCGCCGAAAATGAACTGAGGAAGCAACAGAGGAACGTGGAAGACATCGCCCTGCAGAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp CGACGCGAAGGTGTGGTCTTGGGTTGTGCTCTTCTTTaGGATTTCACACTGGAGCCGAAGCAACTGGTGCTC +
Preference number: 6 (lower is better)
Translates to: RREGVVLGCALL*DFTLEPKQLVL
Trigger: GAGCACCAGTTGCTTCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp GTGTTGTCATTGCGGGAACCACCCCCAGGGACCATGGTACAGGAGTaGTCTTCCACCTTAGACCCAGTTTTCTCTGACTCATCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: VLSLREPPPGTMVQE*SSTLDPVFSDSSVC
Trigger: GCAGACAGATGAGTCAGAGAAAACTGGGTCTAAGGTGGAAGACAACTCCTGTACCATGGTCCCTGGGGGTGGTTCCCGCAATGACAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 90 bp CAAACAAGGGGGTGTCATAGAAATAGTCATCACTGTCACTGTCTGTaGCCGTGTCGCTCTGCTGGCCGGCCAGCAGTGACGTCTCATAGT +
Preference number: 6 (lower is better)
Translates to: QTRGCHRNSHHCHCL*PCRSAGRPAVTSHS
Trigger: ACTATGAGACGTCACTGCTGGCCGGCCAGCAGAGCGACACGGCAACAGACAGTGACAGTGATGACTATTTCTATGACACCCCCTTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 90 bp ACGCTGTCCTTGCCGATCCTGTCACTGTCTCTCTTGCTGCAAGACTaGGCAGCGTCTATCACCCTGTTTCCGGAAATGGTGATGTACCTC +
Preference number: 6 (lower is better)
Translates to: TLSLPILSLSLLLQD*AASITLFPEMVMYL
Trigger: GAGGTACATCACCATTTCCGGAAACAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGAGAGACAGTGACAGGATCGGCAAGGACAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp ACCTCGGTGAGCGCCTGGCTCTGTGTCTCTAGAAACGTCTGGAGCTaGTCTGAGAGCTTCTCAAACTGCTCTACTTTGGCCTTTAGCTCC +
Preference number: 6 (lower is better)
Translates to: TSVSAWLCVSRNVWS*SESFSNCSTLAFSS
Trigger: GGAGCTAAAGGCCAAAGTAGAGCAGTTTGAGAAGCTCTCAGACAAGCTCCAGACGTTTCTAGAGACACAGAGCCAGGCGCTCACCGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp CTCTTCCAGCTTTTGTTGCCTGTCCATGGTCAACTGGTTGAGCTCTaGCCACTTAGTGTCCATCTCTGCCAGTGCCTGCTTCCAGGACTG +
Preference number: 6 (lower is better)
Translates to: LFQLLLPVHGQLVEL*PLSVHLCQCLLPGL
Trigger: CAGTCCTGGAAGCAGGCACTGGCAGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTTGACCATGGACAGGCAACAAAAGCTGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp GCCTGGTCAATCCAGTCGCATCTGTCCCTCAGTTGTCCTGTTAGGTaGTCCCACTTCTGGGTCACAGCTTCCAGTTGCTCGTTCACAATC +
Preference number: 6 (lower is better)
Translates to: AWSIQSHLSLSCPVR*SHFWVTASSCSFTI
Trigger: GATTGTGAACGAGCAACTGGAAGCTGTGACCCAGAAGTGGGACAACCTAACAGGACAACTGAGGGACAGATGCGACTGGATTGACCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp AGGGTACCCGAGAGACTTCTCAGCAGGCTCTGGTACTGTGTGCTTTaGACGATAGCCTGGTCAATCCAGTCGCATCTGTCCCTCAGTTGT +
Preference number: 6 (lower is better)
Translates to: RVPERLLSRLWYCVL*TIAWSIQSHLSLSC
Trigger: ACAACTGAGGGACAGATGCGACTGGATTGACCAGGCTATCGTCAAAAGCACACAGTACCAGAGCCTGCTGAGAAGTCTCTCGGGTACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp ATGCCTTCTAGTTGTCTGCTCAGTTCTGCTTTCAAGTACTCCTCTTaGACCAGTGCCGACAGGTCCTCACAGACCTCCTGGGCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: MPSSCLLSSAFKYSS*TSADRSSQTSWASL
Trigger: CAAGGAGGCCCAGGAGGTCTGTGAGGACCTGTCGGCACTGGTCAAAGAGGAGTACTTGAAAGCAGAACTGAGCAGACAACTAGAAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp CCTTTGAGTCTGCGGCTTCTACCACGAGGTCCTGAGCAAGCCTTTTaGCCTCGTCTACCTGCTGTTTCAGGGTCTGCAGTGACTTCTGTT +
Preference number: 6 (lower is better)
Translates to: PLSLRLLPRGPEQAF*PRLPAVSGSAVTSV
Trigger: AACAGAAGTCACTGCAGACCCTGAAACAGCAGGTAGACGAGGCAAAAAGGCTTGCTCAGGACCTCGTGGTAGAAGCCGCAGACTCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp ATGGCAAAGGCGGTGCAGACTTCCATATGTGCGTTAAGCTGCTCCTaGGCTGTCTCTGGGAGACCTCCCAGAGGTTTAGATGCCAAGAGA +
Preference number: 6 (lower is better)
Translates to: MAKAVQTSICALSCS*AVSGRPPRGLDAKR
Trigger: TCTCTTGGCATCTAAACCTCTGGGAGGTCTCCCAGAGACAGCCAAGGAGCAGCTTAACGCACATATGGAAGTCTGCACCGCCTTTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp AAGATGTCTGCCACGGCGCTCATCTCCAGGCGACTGGTAGGAAACTaGGAGGAGAGAATCCCGTCGATGAATTCCTGTCGAGTGATCTTC +
Preference number: 6 (lower is better)
Translates to: KMSATALISRRLVGN*EERIPSMNSCRVIF
Trigger: GAAGATCACTCGACAGGAATTCATCGACGGGATTCTCTCCTCCAAGTTTCCTACCAGTCGCCTGGAGATGAGCGCCGTGGCAGACATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CAA 90 bp CTCTCCCTGCCGTATCAAAAGCCGACGCGAAGGTGTGGTCTTGGGTaGTGCTCTTCTTTTGGATTTCACACTGGAGCCGAAGCAACTGGT +
Preference number: 6 (lower is better)
Translates to: LSLPYQKPTRRCGLG*CSSFGFHTGAEATG
Trigger: ACCAGTTGCTTCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCGGCTTTTGATACGGCAGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp GCACTCTCTCCCTGCCGTATCAAAAGCCGACGCGAAGGTGTGGTCTaGGGTTGTGCTCTTCTTTTGGATTTCACACTGGAGCCGAAGCAA +
Preference number: 6 (lower is better)
Translates to: ALSPCRIKSRREGVV*GCALLLDFTLEPKQ
Trigger: TTGCTTCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCGGCTTTTGATACGGCAGGGAGAGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp CTCGGGGAAGCCTCTGGCTCTACGCTTTTCTTAAGGAAATCTCCCTaGAGTCCACCAGATGTTCTGCACCCTTCCAGCATCCATCCACCA +
Preference number: 6 (lower is better)
Translates to: LGEASGSTLFLRKSP*SPPDVLHPSSIHPP
Trigger: TGGTGGATGGATGCTGGAAGGGTGCAGAACATCTGGTGGACTCAAGGGAGATTTCCTTAAGAAAAGCGTAGAGCCAGAGGCTTCCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp CCTGAAAGACAGACAGGACCTCTCCAGTGGTCTGATTaGTGGTGCCTGCAATCACTTTATCCGGCTTCTCCG +
Preference number: 6 (lower is better)
Translates to: PERQTGPLQWSD*WCLQSLYPASP
Trigger: CGGAGAAGCCGGATAAAGTGATTGCAGGCACCATCAATCAGACCACTGGAGAGGTCCTGTCTGTCTTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp CACCTGATTTGGCTGCGGCTATGGCCTTTGCAGGGCTaGTCAATGCACTCAGCAGGTTACATAGTGAGACAC +
Preference number: 6 (lower is better)
Translates to: HLIWLRLWPLQG*SMHSAGYIVRH
Trigger: GTGTCTCACTATGTAACCTGCTGAGTGCATTGATCAGCCCTGCAAAGGCCATAGCCGCAGCCAAATCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp GCGTCAAGCCATGCTTGGAAATCCTTAGACATTTGCTaGAACTGGTGTGAGCTCGCACAGGCTGACTGGAGG +
Preference number: 6 (lower is better)
Translates to: ASSHAWKSLDIC*NWCELAQADWR
Trigger: CCTCCAGTCAGCCTGTGCGAGCTCACACCAGTTTCAGCAAATGTCTAAGGATTTCCAAGCATGGCTTGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp TCTTGCAGGTTCTGTTGGCGCTGTCGTTGCTCGCCATaGGGGCTTCCAGTTTCTTCAAAAAGGTCTGCATGC +
Preference number: 6 (lower is better)
Translates to: SCRFCWRCRCSP*GLPVSSKRSAC
Trigger: GCATGCAGACCTTTTTGAAGAAACTGGAAGCCCTCATGGCGAGCAACGACAGCGCCAACAGAACCTGCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp TCGCTGAGCCACCTTCTTATTGAGAGTCTTCCACCTTaGGTTGACACTGTCCAGGTCATGCTCCAGACCCTG +
Preference number: 6 (lower is better)
Translates to: SLSHLLIESLPP*VDTVQVMLQTL
Trigger: CAGGGTCTGGAGCATGACCTGGACAGTGTCAACTCAAGGTGGAAGACTCTCAATAAGAAGGTGGCTCAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 72 bp TCAGAATGGCAGCGTCGATCTCCTCCACTTTCTGCGTaGTTGTGTCGCTCACCAGTCGGTAGCGTTCATTGT +
Preference number: 6 (lower is better)
Translates to: SEWQRRSPPLSA*LCRSPVGSVHC
Trigger: ACAATGAACGCTACCGACTGGTGAGCGACACAATCACGCAGAAAGTGGAGGAGATCGACGCTGCCATTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 72 bp TCTGGGAGACCTCCCAGAGGTTTAGATGCCAAGAGATaGCGCTCTGTGTCCGTCAGCCACTGTTGCAAATCT +
Preference number: 6 (lower is better)
Translates to: SGRPPRGLDAKR*RSVSVSHCCKS
Trigger: AGATTTGCAACAGTGGCTGACGGACACAGAGCGTCATCTCTTGGCATCTAAACCTCTGGGAGGTCTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 72 bp TTTCCTCAGACGAGGCCTTTTCGAGCTGGACCGCGCTaGGTTCATACTTCAGCTCCCTCATCTCTTTCTCTG +
Preference number: 6 (lower is better)
Translates to: FPQTRPFRAGPR*VHTSAPSSLSL
Trigger: CAGAGAAAGAGATGAGGGAGCTGAAGTATGAACTCAGCGCGGTCCAGCTCGAAAAGGCCTCGTCTGAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp ACTGAATGTTCCTCTCGGCTAGTGCGTGCGCCCTGGTaGCTCTGTCAACTTCCCTCTGGAGTTTTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: TECSSRLVRAPW*LCQLPSGVFLS
Trigger: AGAAAGGAAAACTCCAGAGGGAAGTTGACAGAGTCACCAGGGCGCACGCACTAGCCGAGAGGAACATTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp AGTCTGGTGGCGATGAGGACATCAATGATACCGACGTaGAGGGCCTCTTCTATGGTCAGCCTCGAGAAAACC +
Preference number: 6 (lower is better)
Translates to: SLVAMRTSMIPT*RASSMVSLEKT
Trigger: GGTTTTCTCGAGGCTGACCATAGAAGAGGCCCTTCACGTCGGTATCATTGATGTCCTCATCGCCACCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp ACACACCAGAAGAGAGGGAATGGCACCTCCTTTTTGTaGGCTGAAGACGGTGTACTCCGAAAGGGTGACCTC +
Preference number: 6 (lower is better)
Translates to: THQKRGNGTSFL*AEDGVLRKGDL
Trigger: GAGGTCACCCTTTCGGAGTACACCGTCTTCAGCTCACAAAAAGGAGGTGCCATTCCCTCTCTTCTGGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS GCA 72 bp TCAGCTCCGCGTGGTAGCTTTTCTTCCGGGCGACACTaGTGTTTCTCTCACTCCAATCATAAGCAACTTCCG +
Preference number: 6 (lower is better)
Translates to: SAPRGSFSSGRH*CFSHSNHKQLP
Trigger: CGGAAGTTGCTTATGATTGGAGTGAGAGAAACAGCAGTGTCGCCCGGAAGAAAAGCTACCACGCGGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 72 bp TCATGTAAATCATCTCTTTCCAGGGGAGTCCGGATCTaGCGAATCAACCTGTCTTCACAGCTCTCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: SCKSSLSRGVRI*RINLSSQLSRR
Trigger: CCGCCTGGAGAGCTGTGAAGACAGGTTGATTCGGCAGATCCGGACTCCCCTGGAAAGAGATGATTTACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 72 bp TCCACCTTAGACCCAGTTTTCTCTGACTCATCTGTCTaGCGAGTGGCTCCACTCTCAGCAGAAGCATCTGAC +
Preference number: 6 (lower is better)
Translates to: STLDPVFSDSSV*RVAPLSAEASD
Trigger: GTCAGATGCTTCTGCTGAGAGTGGAGCCACTCGGCAGACAGATGAGTCAGAGAAAACTGGGTCTAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp CCTTCAAGAGTCATGGTTGTTGTCATGGTTGTTGTGTaGGGAGCCCCTCTGTGGCTAAGTTCCTCGGTGTGT +
Preference number: 6 (lower is better)
Translates to: PSRVMVVVMVVV*GAPLWLSSSVC
Trigger: ACACACCGAGGAACTTAGCCACAGAGGGGCTCCGCACACAACAACCATGACAACAACCATGACTCTTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp GCCTCTAACCGGTCCGCCTCAGTGGTTACCAGCTCCTaGAGGTCAAGAAAACCCTTCTGGGTTGTATTTAAG +
Preference number: 6 (lower is better)
Translates to: ASNRSASVVTSS*RSRKPFWVVFK
Trigger: CTTAAATACAACCCAGAAGGGTTTTCTTGACCTGCAGGAGCTGGTAACCACTGAGGCGGACCGGTTAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS GCA 72 bp ATGATCTTTCCGTGCTGGGCCTTGACTTTCTCATACTaGTGGTTCAGATTCCCCTTCGTGGCCTCACTGTGC +
Preference number: 6 (lower is better)
Translates to: MIFPCWALTFSY*WFRFPFVASLC
Trigger: GCACAGTGAGGCCACGAAGGGGAATCTGAACCAGCAGTATGAGAAAGTCAAGGCCCAGCACGGAAAGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp ACATCCAGCTTTGCGGAAATCGGGGGAGAGTCCCTCTaGTCTTCTTTCTTGGCGTCAAGCCATGCTTGGAAA +
Preference number: 6 (lower is better)
Translates to: TSSFAEIGGESL*SSFLASSHAWK
Trigger: TTTCCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGAGGGACTCTCCCCCGATTTCCGCAAAGCTGGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp CTAAATCGGTCCCAGTCTGTTTTCATGGTGTTCAGCTaGAACTGTAGAGCTGCCTTCTCTGCCCCCTGTGTC +
Preference number: 6 (lower is better)
Translates to: LNRSQSVFMVFS*NCRAAFSAPCV
Trigger: GACACAGGGGGCAGAGAAGGCAGCTCTACAGTTGCAGCTGAACACCATGAAAACAGACTGGGACCGATTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp CTCAGTTCGCTGTGCTCTTCAGCTAACGTCTCCGCTTaGAACAACACATCAGAGGTTCCCTTTGAGTCTGCG +
Preference number: 6 (lower is better)
Translates to: LSSLCSSANVSA*NNTSEVPFESA
Trigger: CGCAGACTCAAAGGGAACCTCTGATGTGTTGTTGCAAGCGGAGACGTTAGCTGAAGAGCACAGCGAACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp TATCCTGTACAGCTCTGGCAGATACGTCTTTTTCAGTaGCCTCGGATCTGGCGATCATCTCCTCTCCCCTCT +
Preference number: 6 (lower is better)
Translates to: YPVQLWQIRLFQ*PRIWRSSPLPS
Trigger: AGAGGGGAGAGGAGATGATCGCCAGATCCGAGGGCACTGAAAAAGACGTATCTGCCAGAGCTGTACAGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp TTCTTCGCCTTCACTCGACTCGATGAGATCATTTCCTaGTTTGTTGACGGCTTCTACCGTGGACTGGTGGGC +
Preference number: 6 (lower is better)
Translates to: FFAFTRLDEIIS*FVDGFYRGLVG
Trigger: GCCCACCAGTCCACGGTAGAAGCCGTCAACAAAGCAGGAAATGATCTCATCGAGTCGAGTGAAGGCGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp ACCTCTTCAAACCTGGCCTGGATGATCGTGATCCAGTaGTTAATGGTGGTAATGGAGTCAGGGTGGCAGACG +
Preference number: 6 (lower is better)
Translates to: TSSNLAWMIVIQ*LMVVMESGWQT
Trigger: CGTCTGCCACCCTGACTCCATTACCACCATTAAGCACTGGATCACGATCATCCAGGCCAGGTTTGAAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp GTCAATGTACCCATCACCATCTCTGTCAAAGATGTCTaGCACGGCGCTCATCTCCAGGCGACTGGTAGGAAA +
Preference number: 6 (lower is better)
Translates to: VNVPITISVKDV*HGAHLQATGRK
Trigger: TTTCCTACCAGTCGCCTGGAGATGAGCGCCGTGGCAGACATCTTTGACAGAGATGGTGATGGGTACATTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS GCA 72 bp AGCTTCTGCAGGGCGATGTCTTCCACGTTCCTCTGTTaGTTCCTCAGTTCATTTTCGGCGGCCTCCTTAACT +
Preference number: 6 (lower is better)
Translates to: SFCRAMSSTFLC*FLSSFSAASLT
Trigger: AGTTAAGGAGGCCGCCGAAAATGAACTGAGGAAGCAACAGAGGAACGTGGAAGACATCGCCCTGCAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp GCCCGGAAGTTTTCTCTCTGGAGAGACACAAAGTCGTaGTTGATGCCTGAGAGATCGGTTTCAGTGACGACC +
Preference number: 6 (lower is better)
Translates to: ARKFSLWRDTKS*LMPERSVSVTT
Trigger: GGTCGTCACTGAAACCGATCTCTCAGGCATCAAGCACGACTTTGTGTCTCTCCAGAGAGAAAACTTCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp TCTCGAATGTTGGTCTCCCACAGCTTCGCGTTCTCTTaGGCCCGGAAGTTTTCTCTCTGGAGAGACACAAAG +
Preference number: 6 (lower is better)
Translates to: SRMLVSHSFAFS*ARKFSLWRDTK
Trigger: CTTTGTGTCTCTCCAGAGAGAAAACTTCCGGGCGCAAGAGAACGCGAAGCTGTGGGAGACCAACATTCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS GCA 72 bp ATCACTGTGCTTCGCAGGATCCGAACCAGTCGCAGCTaGTGGGAGTCTCCAAACCTGTATTTGTTATCACCG +
Preference number: 6 (lower is better)
Translates to: ITVLRRIRTSRS*WESPNLYLLSP
Trigger: CGGTGATAACAAATACAGGTTTGGAGACTCCCAGCAGCTGCGACTGGTTCGGATCCTGCGAAGCACAGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182507.4
ENSMUST00000183100.8
CDS CCA 72 bp GTCACGCTAGAAGACGTCAAGGAAGGGGTTAAACTCTaGGTTAGCCCTGAGTTCAGGCTGGGGTGTAAGGTT +
Preference number: 6 (lower is better)
Translates to: VTLEDVKEGVKL*VSPEFRLGCKV
Trigger: AACCTTACACCCCAGCCTGAACTCAGGGCTAACCCAGAGTTTAACCCCTTCCTTGACGTCTTCTAGCGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 72 bp ACTCCTGGACAAGGTCTTCCAGTTTGTGAATGCTGCTaGACCTGTCACAGCTGTACTTGCGCTGGATGGCAT +
Preference number: 6 (lower is better)
Translates to: TPGQGLPVCECC*TCHSCTCAGWH
Trigger: ATGCCATCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 72 bp GATCGGAGAGCGGGGACAGACGGCGAGTCAGCCGCTTaGCTGAAAAACTCTTCACACTTATTTGTGATCGTT +
Preference number: 6 (lower is better)
Translates to: DRRAGTDGESAA*LKNSSHLFVIV
Trigger: AACGATCACAAATAAGTGTGAAGAGTTTTTCAGCCAAGCGGCTGACTCGCCGTCTGTCCCCGCTCTCCGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 72 bp CGGCCAGCAGTGACGTCTCATAGTCACCAGCATCAATaGCTCCTTTATGTGACAGTGGGCCACAATCTGATG +
Preference number: 6 (lower is better)
Translates to: RPAVTSHSHQHQ*LLYVTVGHNLM
Trigger: CATCAGATTGTGGCCCACTGTCACATAAAGGAGCCATTGATGCTGGTGACTATGAGACGTCACTGCTGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp TCTGGATGTCATTCTTGGCAGGAAGCAGCGAGCCCTTaGCATCCAAGAGTACCTCTGCGGTTTTCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: SGCHSWQEAASP*HPRVPLRFSSA
Trigger: AGCTGAAGAAAACCGCAGAGGTACTCTTGGATGCCAAGGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp AGCAGGCTCTGGTACTGTGTGCTTTTGACGATAGCCTaGTCAATCCAGTCGCATCTGTCCCTCAGTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SRLWYCVLLTIA*SIQSHLSLSCP
Trigger: AGGACAACTGAGGGACAGATGCGACTGGATTGACCAGGCTATCGTCAAAAGCACACAGTACCAGAGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TCAGTCAGGGTACCCGAGAGACTTCTCAGCAGGCTCTaGTACTGTGTGCTTTTGACGATAGCCTGGTCAATC +
Preference number: 6 (lower is better)
Translates to: SVRVPERLLSRL*YCVLLTIAWSI
Trigger: GATTGACCAGGCTATCGTCAAAAGCACACAGTACCAGAGCCTGCTGAGAAGTCTCTCGGGTACCCTGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GGTCCATTTCCTTCTGCAGGGACTTTAACTCGGCGATaGAACTCTCTGATTCAGTGGGATCCAGGGAGAACG +
Preference number: 6 (lower is better)
Translates to: GPFPSAGTLTRR*NSLIQWDPGRT
Trigger: CGTTCTCCCTGGATCCCACTGAATCAGAGAGTTCCATCGCCGAGTTAAAGTCCCTGCAGAAGGAAATGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp CAGCTTCTTTTCTACAGCTGTGAGCCACTCGTTCAGTaGCTCCAGGGTCTCATGAAACTCCTGAGCTACCAC +
Preference number: 6 (lower is better)
Translates to: QLLFYSCEPLVQ*LQGLMKLLSYH
Trigger: GTGGTAGCTCAGGAGTTTCATGAGACCCTGGAGCCACTGAACGAGTGGCTCACAGCTGTAGAAAAGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp AAATCTGCTCCTCCAGCTTTGGTGCCTGGGTTCCTATaGGCTCCGAGTTTGCCAGCTTCTTTTCTACAGCTG +
Preference number: 6 (lower is better)
Translates to: KSAPPALVPGFL*APSLPASFLQL
Trigger: CAGCTGTAGAAAAGAAGCTGGCAAACTCGGAGCCCATAGGAACCCAGGCACCAAAGCTGGAGGAGCAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp TTGTGCTGTGAAATCTGCTCCTCCAGCTTTGGTGCCTaGGTTCCTATGGGCTCCGAGTTTGCCAGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: LCCEICSSSFGA*VPMGSEFASFF
Trigger: AAAGAAGCTGGCAAACTCGGAGCCCATAGGAACCCAGGCACCAAAGCTGGAGGAGCAGATTTCACAGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp TCCAGCAGTTTGGCTTCCCGTTCTTCGACCAGCGTGTaGATGCTTCCCCAGATGAAAACCATTTGGTCCAAC +
Preference number: 6 (lower is better)
Translates to: SSSLASRSSTSV*MLPQMKTIWSN
Trigger: GTTGGACCAAATGGTTTTCATCTGGGGAAGCATCCACACGCTGGTCGAAGAACGGGAAGCCAAACTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp AGAATTTCTCCGCTAGCTCCATCACATCCAGCAGTTTaGCTTCCCGTTCTTCGACCAGCGTGTGGATGCTTC +
Preference number: 6 (lower is better)
Translates to: RISPLAPSHPAV*LPVLRPACGCF
Trigger: GAAGCATCCACACGCTGGTCGAAGAACGGGAAGCCAAACTGCTGGATGTGATGGAGCTAGCGGAGAAATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp TCTGCGCTCAGGCTCCTCACCTCCTTCTCCGTTTTCTaGATGATCATGCTCTGCTGGTCACACTTTTGCTTG +
Preference number: 6 (lower is better)
Translates to: SALRLLTSFSVF*MIMLCWSHFCL
Trigger: CAAGCAAAAGTGTGACCAGCAGAGCATGATCATCCAGAAAACGGAGAAGGAGGTGAGGAGCCTGAGCGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp TTATCCGACTCTTCCTGGAGCAGGATCATCTTCCTGTaGGTCATCTGCTCTTCGATGGTCTTCAGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: LSDSSWSRIIFL*VICSSMVFRCS
Trigger: GCTGCACCTGAAGACCATCGAAGAGCAGATGACCCACAGGAAGATGATCCTGCTCCAGGAAGAGTCGGATAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp AGCTTCGCGTTCTCTTGCGCCCGGAAGTTTTCTCTCTaGAGAGACACAAAGTCGTGCTTGATGCCTGAGAGA +
Preference number: 6 (lower is better)
Translates to: SFAFSCARKFSL*RDTKSCLMPER
Trigger: TCTCTCAGGCATCAAGCACGACTTTGTGTCTCTCCAGAGAGAAAACTTCCGGGCGCAAGAGAACGCGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp GACGCGAAGGTGTGGTCTTGGGTTGTGCTCTTCTTTTaGATTTCACACTGGAGCCGAAGCAACTGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: DAKVWSWVVLFF*ISHWSRSNWCS
Trigger: TGAGCACCAGTTGCTTCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp CCTGCCGTATCAAAAGCCGACGCGAAGGTGTGGTCTTaGGTTGTGCTCTTCTTTTGGATTTCACACTGGAGC +
Preference number: 6 (lower is better)
Translates to: PAVSKADAKVWS*VVLFFWISHWS
Trigger: GCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCGGCTTTTGATACGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp GTGTCTCCAGGAGCCGGAGATGCTGAGCCAGATTTCTaGCTGAAATCATCCTCGTCAGAAAAATCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: VSPGAGDAEPDF*LKSSSSEKSAE
Trigger: CTCTGCGGATTTTTCTGACGAGGATGATTTCAGCCAGAAATCTGGCTCAGCATCTCCGGCTCCTGGAGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182314.8
ENSMUST00000182697.8
ENSMUST00000183034.5
ENSMUST00000187486.7
CDS CCA 72 bp GCTTGCTCGTTTCCCGACCTCTCAGCTCAAATATGCTaGAAGAAGAAAGGGCACCATTGGAGCACAGAGAGC +
Preference number: 6 (lower is better)
Translates to: ACSFPDLSAQIC*KKKGHHWSTES
Trigger: GCTCTCTGTGCTCCAATGGTGCCCTTTCTTCTTCCAGCATATTTGAGCTGAGAGGTCGGGAAACGAGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CCA 72 bp ATAAGCCAGAGTCCTCCTCTTCTGAAGTTTGAGAGTTaGTACCCCATCTGCACTTGCTGGCCTTCGCGACAG +
Preference number: 6 (lower is better)
Translates to: ISQSPPLLKFES*YPICTCWPSRQ
Trigger: CTGTCGCGAAGGCCAGCAAGTGCAGATGGGGTACCAACTCTCAAACTTCAGAAGAGGAGGACTCTGGCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CAA 72 bp GAGATCACACAGCCCTTGGAGTTTCTCTCTGTACTCTaGCTGACGCTCTGCCACAACCTTCTGATGACCCAG +
Preference number: 6 (lower is better)
Translates to: EITQPLEFLSVL*LTLCHNLLMTQ
Trigger: CTGGGTCATCAGAAGGTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAACTCCAAGGGCTGTGTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS CAA 72 bp TTGCCGATCCTGTCACTGTCTCTCTTGCTGCAAGACTaGGCAGCGTCTATCACCCTGTTTCCGGAAATGGTG +
Preference number: 6 (lower is better)
Translates to: LPILSLSLLLQD*AASITLFPEMV
Trigger: CACCATTTCCGGAAACAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGAGAGACAGTGACAGGATCGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp TTCTGGATGTCATTCTTGGCAGGAAGCAGCGAGCCCTaGGCATCCAAGAGTACCTCTGCGGTTTTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: FWMSFLAGSSEP*ASKSTSAVFFS
Trigger: GCTGAAGAAAACCGCAGAGGTACTCTTGGATGCCAAGGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp CCGACAATGTCATCAAGCGTCTTCTGGATGTCATTCTaGGCAGGAAGCAGCGAGCCCTTGGCATCCAAGAGT +
Preference number: 6 (lower is better)
Translates to: PTMSSSVFWMSF*AGSSEPLASKS
Trigger: ACTCTTGGATGCCAAGGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGAAGACGCTTGATGACATTGTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp AGCGCCTGGCTCTGTGTCTCTAGAAACGTCTGGAGCTaGTCTGAGAGCTTCTCAAACTGCTCTACTTTGGCC +
Preference number: 6 (lower is better)
Translates to: SAWLCVSRNVWS*SESFSNCSTLA
Trigger: GGCCAAAGTAGAGCAGTTTGAGAAGCTCTCAGACAAGCTCCAGACGTTTCTAGAGACACAGAGCCAGGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp GAGAGACTTCTCAGCAGGCTCTGGTACTGTGTGCTTTaGACGATAGCCTGGTCAATCCAGTCGCATCTGTCC +
Preference number: 6 (lower is better)
Translates to: ERLLSRLWYCVL*TIAWSIQSHLS
Trigger: GGACAGATGCGACTGGATTGACCAGGCTATCGTCAAAAGCACACAGTACCAGAGCCTGCTGAGAAGTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp AGTTGTCTGCTCAGTTCTGCTTTCAAGTACTCCTCTTaGACCAGTGCCGACAGGTCCTCACAGACCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SCLLSSAFKYSS*TSADRSSQTSW
Trigger: CCAGGAGGTCTGTGAGGACCTGTCGGCACTGGTCAAAGAGGAGTACTTGAAAGCAGAACTGAGCAGACAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp CTGACATCTGTCTATCCACGGCCGCAGAGTCTCCACTaGCTCTCTGTACTTGAGGGCTTTTTCCAACGAGTC +
Preference number: 6 (lower is better)
Translates to: LTSVYPRPQSLH*LSVLEGFFQRV
Trigger: GACTCGTTGGAAAAAGCCCTCAAGTACAGAGAGCAAGTGGAGACTCTGCGGCCGTGGATAGACAGATGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp GCCAGCATCATCTTGCAGGTTCTGTTGGCGCTGTCGTaGCTCGCCATGAGGGCTTCCAGTTTCTTCAAAAAG +
Preference number: 6 (lower is better)
Translates to: ASIILQVLLALS*LAMRASSFFKK
Trigger: CTTTTTGAAGAAACTGGAAGCCCTCATGGCGAGCAACGACAGCGCCAACAGAACCTGCAAGATGATGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp CAGAATTTCTCCGCTAGCTCCATCACATCCAGCAGTTaGGCTTCCCGTTCTTCGACCAGCGTGTGGATGCTT +
Preference number: 6 (lower is better)
Translates to: QNFSASSITSSS*ASRSSTSVWML
Trigger: AAGCATCCACACGCTGGTCGAAGAACGGGAAGCCAAACTGCTGGATGTGATGGAGCTAGCGGAGAAATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp GTCGATTCCGGGATCCTCCAGGTCCCGGATGAAATCTaGAGTGTCTTTGATGGTAACGACCAGCGACATGTG +
Preference number: 6 (lower is better)
Translates to: VDSGILQVPDEI*SVFDGNDQRHV
Trigger: CACATGTCGCTGGTCGTTACCATCAAAGACACTCAAGATTTCATCCGGGACCTGGAGGATCCCGGAATCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp TCGCCTTCACTCGACTCGATGAGATCATTTCCTGCTTaGTTGACGGCTTCTACCGTGGACTGGTGGGCTAAG +
Preference number: 6 (lower is better)
Translates to: SPSLDSMRSFPA*LTASTVDWWAK
Trigger: CTTAGCCCACCAGTCCACGGTAGAAGCCGTCAACAAAGCAGGAAATGATCTCATCGAGTCGAGTGAAGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp TGCCAAGAGATGACGCTCTGTGTCCGTCAGCCACTGTaGCAAATCTTCGATTTCACCGTGGAACCCTTTGGC +
Preference number: 6 (lower is better)
Translates to: CQEMTLCVRQPL*QIFDFTVEPFG
Trigger: GCCAAAGGGTTCCACGGTGAAATCGAAGATTTGCAACAGTGGCTGACGGACACAGAGCGTCATCTCTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp CACGGATTCCCACTTCTCTTTCAGGTTGGTGATGTCTaGGTCAATGTTGGTCTCCGCAGATCGGGGACACCT +
Preference number: 6 (lower is better)
Translates to: HGFPLLFQVGDV*VNVGLRRSGTP
Trigger: AGGTGTCCCCGATCTGCGGAGACCAACATTGACCAAGACATCACCAACCTGAAAGAGAAGTGGGAATCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp CTCTCGAATGTTGGTCTCCCACAGCTTCGCGTTCTCTaGCGCCCGGAAGTTTTCTCTCTGGAGAGACACAAA +
Preference number: 6 (lower is better)
Translates to: LSNVGLPQLRVL*RPEVFSLERHK
Trigger: TTTGTGTCTCTCCAGAGAGAAAACTTCCGGGCGCAAGAGAACGCGAAGCTGTGGGAGACCAACATTCGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp CCCTGCCGTATCAAAAGCCGACGCGAAGGTGTGGTCTaGGGTTGTGCTCTTCTTTTGGATTTCACACTGGAG +
Preference number: 6 (lower is better)
Translates to: PCRIKSRREGVV*GCALLLDFTLE
Trigger: CTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCGGCTTTTGATACGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp CTGACTGACGCCCTTCTTGCCTTCTCTTTCACTGCTTaGCCGCACCGGCTCGGTGTCATCTACAACTTTTTG +
Preference number: 6 (lower is better)
Translates to: LTDALLAFSFTA*PHRLGVIYNFL
Trigger: CAAAAAGTTGTAGATGACACCGAGCCGGTGCGGCAAAGCAGTGAAAGAGAAGGCAAGAAGGGCGTCAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS CAA 72 bp AAAGTTTTCTCCTGGTCTTCAGAGCTGGAAATCCACTaGTGTGCCCCGTCTCTGGGCACAACCAATGCCGTG +
Preference number: 6 (lower is better)
Translates to: KVFSWSSELEIH*CAPSLGTTNAV
Trigger: CACGGCATTGGTTGTGCCCAGAGACGGGGCACACAAGTGGATTTCCAGCTCTGAAGACCAGGAGAAAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CAA 90 bp TTGGAGGACTCTTCCAGCTTTTGTTGCCTGTCCATGGTCAACTGGTaGAGCTCTTGCCACTTAGTGTCCATCTCTGCCAGTGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LEDSSSFCCLSMVNW*SSCHLVSISASACF
Trigger: GAAGCAGGCACTGGCAGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTTGACCATGGACAGGCAACAAAAGCTGGAAGAGTCCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TCCGTGACCGCTTCTTTATCTACCTCGCAGACGCTGAGCAGGCTATaGGCTGTGTTGTTCAGTAGTTCCAGCATACCAAAGTGGTGGTCC +
Preference number: 6 (lower is better)
Translates to: SVTASLSTSQTLSRL*AVLFSSSSIPKWWS
Trigger: GGACCACCACTTTGGTATGCTGGAACTACTGAACAACACAGCCAATAGCCTGCTCAGCGTCTGCGAGGTAGATAAAGAAGCGGTCACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp CTTCAGCTAACGTCTCCGCTTGCAACAACACATCAGAGGTTCCCTTaGAGTCTGCGGCTTCTACCACGAGGTCCTGAGCAAGCCTTTTTG +
Preference number: 6 (lower is better)
Translates to: LQLTSPLATTHQRFP*SLRLLPRGPEQAFL
Trigger: CAAAAAGGCTTGCTCAGGACCTCGTGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGATGTGTTGTTGCAAGCGGAGACGTTAGCTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TCCCATGCTGAATTTAGCTCGTCAATGCTCTTCTTGACAATGGGTTaGTCAGGCTCCCCACATGCAGCGATGAGCTCTGAGCCTAGCGTG +
Preference number: 6 (lower is better)
Translates to: SHAEFSSSMLFLTMG*SGSPHAAMSSEPSV
Trigger: CACGCTAGGCTCAGAGCTCATCGCTGCATGTGGGGAGCCTGACAAACCCATTGTCAAGAAGAGCATTGACGAGCTAAATTCAGCATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp ACGGTCTCCAGGTCTGTTCCAATGGGAGACATTGTGGCTAACTTGTaGCCTGCGATGTCAACCCAGTCGAATATTCCCTGCAATCCGTCC +
Preference number: 6 (lower is better)
Translates to: TVSRSVPMGDIVANL*PAMSTQSNIPCNPS
Trigger: GGACGGATTGCAGGGAATATTCGACTGGGTTGACATCGCAGGCAACAAGTTAGCCACAATGTCTCCCATTGGAACAGACCTGGAGACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp GCTTCTTCGCCTTCACTCGACTCGATGAGATCATTTCCTGCTTTGTaGACGGCTTCTACCGTGGACTGGTGGGCTAAGACGTCGTTTTGG +
Preference number: 6 (lower is better)
Translates to: ASSPSLDSMRSFPAL*TASTVDWWAKTSFW
Trigger: CCAAAACGACGTCTTAGCCCACCAGTCCACGGTAGAAGCCGTCAACAAAGCAGGAAATGATCTCATCGAGTCGAGTGAAGGCGAAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp AGGTTTAGATGCCAAGAGATGACGCTCTGTGTCCGTCAGCCACTGTaGCAAATCTTCGATTTCACCGTGGAACCCTTTGGCCTGGCGCAA +
Preference number: 6 (lower is better)
Translates to: RFRCQEMTLCVRQPL*QIFDFTVEPFGLAQ
Trigger: TTGCGCCAGGCCAAAGGGTTCCACGGTGAAATCGAAGATTTGCAACAGTGGCTGACGGACACAGAGCGTCATCTCTTGGCATCTAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp CCTTGTCTCAAAGTTTTCTCCTGGTCTTCAGAGCTGGAAATCCACTaGTGTGCCCCGTCTCTGGGCACAACCAATGCCGTGCTCTTCGTA +
Preference number: 6 (lower is better)
Translates to: PCLKVFSWSSELEIH*CAPSLGTTNAVLFV
Trigger: TACGAAGAGCACGGCATTGGTTGTGCCCAGAGACGGGGCACACAAGTGGATTTCCAGCTCTGAAGACCAGGAGAAAACTTTGAGACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CAA 90 bp AAAGCCCATTTCCCGAATGGACGTCTCATCTACCAGCTTATCGCTTaGGCCATCTCTACCTTTAACCAGACCTCTTCCAGGTCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: KAHFPNGRLIYQLIA*AISTFNQTSSRSLL
Trigger: CAGCAGGGACCTGGAAGAGGTCTGGTTAAAGGTAGAGATGGCCAAAGCGATAAGCTGGTAGATGAGACGTCCATTCGGGAAATGGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 90 bp TTGTTTCTGAGGTCACTGCAGACGTGTGGCTTTTCTTCTGCCATCTaGGGAACAGCACATGATGTTTGCCCCAAAGCTTCGGCCTGGTCT +
Preference number: 6 (lower is better)
Translates to: LFLRSLQTCGFSSAI*GTAHDVCPKASAWS
Trigger: AGACCAGGCCGAAGCTTTGGGGCAAACATCATGTGCTGTTCCCAAGATGGCAGAAGAAAAGCCACACGTCTGCAGTGACCTCAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 90 bp TCAAGCGTCTTCTGGATGTCATTCTTGGCAGGAAGCAGCGAGCCCTaGGCATCCAAGAGTACCTCTGCGGTTTTCTTCAGCTTCTCTACA +
Preference number: 6 (lower is better)
Translates to: SSVFWMSFLAGSSEP*ASKSTSAVFFSFST
Trigger: TGTAGAGAAGCTGAAGAAAACCGCAGAGGTACTCTTGGATGCCAAGGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGAAGACGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp CTGACTTGCTTCGGAAAAGCGAGCAGACAGATCCTTCATTTTCGCTaGCAGGGAGGAGGCTGTGGACGGGTCTGTCGTCTCTATAAATGT +
Preference number: 6 (lower is better)
Translates to: LTCFGKASRQILHFR*QGGGCGRVCRLYKC
Trigger: ACATTTATAGAGACGACAGACCCGTCCACAGCCTCCTCCCTGCAAGCGAAAATGAAGGATCTGTCTGCTCGCTTTTCCGAAGCAAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TCCAATAGCTGTGGCCCAGTCTTGTTCATCTTATCTATGTGTGGCTaGTGCTCGGCTATCAGTTCTCGAAGTTGCCGGTGCTCCTCTTGC +
Preference number: 6 (lower is better)
Translates to: SNSCGPVLFILSMCG*CSAISSRSCRCSSC
Trigger: GCAAGAGGAGCACCGGCAACTTCGAGAACTGATAGCCGAGCACAAGCCACACATAGATAAGATGAACAAGACTGGGCCACAGCTATTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp TTGACGGTCTCCAGGTCTGTTCCAATGGGAGACATTGTGGCTAACTaGTTGCCTGCGATGTCAACCCAGTCGAATATTCCCTGCAATCCG +
Preference number: 6 (lower is better)
Translates to: LTVSRSVPMGDIVAN*LPAMSTQSNIPCNP
Trigger: CGGATTGCAGGGAATATTCGACTGGGTTGACATCGCAGGCAACAAGTTAGCCACAATGTCTCCCATTGGAACAGACCTGGAGACCGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp CTTGCTTCTTCGCCTTCACTCGACTCGATGAGATCATTTCCTGCTTaGTTGACGGCTTCTACCGTGGACTGGTGGGCTAAGACGTCGTTT +
Preference number: 6 (lower is better)
Translates to: LASSPSLDSMRSFPA*LTASTVDWWAKTSF
Trigger: AAACGACGTCTTAGCCCACCAGTCCACGGTAGAAGCCGTCAACAAAGCAGGAAATGATCTCATCGAGTCGAGTGAAGGCGAAGAAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp TCTTGCGCCCGGAAGTTTTCTCTCTGGAGAGACACAAAGTCGTGCTaGATGCCTGAGAGATCGGTTTCAGTGACGACCTTGGACTCCATT +
Preference number: 6 (lower is better)
Translates to: SCARKFSLWRDTKSC*MPERSVSVTTLDSI
Trigger: AATGGAGTCCAAGGTCGTCACTGAAACCGATCTCTCAGGCATCAAGCACGACTTTGTGTCTCTCCAGAGAGAAAACTTCCGGGCGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp ACATGGATGTCAGATATCTGGCATCCATCATCCCTAGGTGCATCCTaGGAGACAGAGGACACACCAGAAGAGAGGGAATGGCACCTCCTT +
Preference number: 6 (lower is better)
Translates to: TWMSDIWHPSSLGAS*ETEDTPEEREWHLL
Trigger: AAGGAGGTGCCATTCCCTCTCTTCTGGTGTGTCCTCTGTCTCCAAGGATGCACCTAGGGATGATGGATGCCAGATATCTGACATCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS CAA 90 bp GGGCTCCCTACATTCCCTACTGTGTGCTGTGGTTTGGGACTCCCCTaGTCTCAAAGTTTTCTCCTGGTCTTCAGAGCTGGAAATCCACTT +
Preference number: 6 (lower is better)
Translates to: GLPTFPTVCCGLGLP*SQSFLLVFRAGNPL
Trigger: AAGTGGATTTCCAGCTCTGAAGACCAGGAGAAAACTTTGAGACAAGGGGAGTCCCAAACCACAGCACACAGTAGGGAATGTAGGGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS TCA 72 bp AGGATGAGTTTGTCTTCGCAGCTGACACTATCCCTCTaGACTCGGGTGGCAATCTGCTGCAGCATATCCAAC +
Preference number: 6 (lower is better)
Translates to: RMSLSSQLTLSL*TRVAICCSISN
Trigger: GTTGGATATGCTGCAGCAGATTGCCACCCGAGTTCAGAGGGATAGTGTCAGCTGCGAAGACAAACTCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 72 bp TTTTCCATGGACTCCTGGACAAGGTCTTCCAGTTTGTaGATGCTGCTGGACCTGTCACAGCTGTACTTGCGC +
Preference number: 6 (lower is better)
Translates to: FSMDSWTRSSSL*MLLDLSQLYLR
Trigger: GCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAACTGGAAGACCTTGTCCAGGAGTCCATGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000187486.7
CDS TCA 72 bp CTTCAACAGTCATTTTCTGACCGGAGTTGCAATCGATaGGACCACCAGACAGAAGCTGTGCCCCTAACAGCC +
Preference number: 6 (lower is better)
Translates to: LQQSFSDRSCNR*DHQTEAVPLTA
Trigger: GGCTGTTAGGGGCACAGCTTCTGTCTGGTGGTCTCATCGATTGCAACTCCGGTCAGAAAATGACTGTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp GTACCTCAAGTCGCCTTTGTGAGAAATGACGTCCTCTaGGAAGCTCTTCTGCCTCGTCAGCTTGTCCATGAG +
Preference number: 6 (lower is better)
Translates to: VPQVAFVRNDVL*EALLPRQLVHE
Trigger: CTCATGGACAAGCTGACGAGGCAGAAGAGCTTCTCAGAGGACGTCATTTCTCACAAAGGCGACTTGAGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp CCCGTTCTTCGACCAGCGTGTGGATGCTTCCCCAGATaGAAACCATTTGGTCCAACTTATCCTGTACAGCTC +
Preference number: 6 (lower is better)
Translates to: PVLRPACGCFPR*KPFGPTYPVQL
Trigger: GAGCTGTACAGGATAAGTTGGACCAAATGGTTTTCATCTGGGGAAGCATCCACACGCTGGTCGAAGAACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 72 bp CCGGTAAGTTTGCTATTCTCAACCATGGTTGCTCTCTaGCGCTGCAGTAGATCTGAATACGCCCCGTGCTCA +
Preference number: 6 (lower is better)
Translates to: PVSLLFSTMVAL*RCSRSEYAPCS
Trigger: TGAGCACGGGGCGTATTCAGATCTACTGCAGCGTCAGAGAGCAACCATGGTTGAGAATAGCAAACTTACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp GCCTGTGCCACCGCAGCGCTCTCTCTACATGAAAACTaGATTTCGGTGATTTTCCTTCTGGCTTCCAACTCG +
Preference number: 6 (lower is better)
Translates to: ACATAALSLHEN*ISVIFLLASNS
Trigger: CGAGTTGGAAGCCAGAAGGAAAATCACCGAAATTCAGTTTTCATGTAGAGAGAGCGCTGCGGTGGCACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp CCACAGGAGCAGCCTTTCTTTCGCAGACATGTCCTCTaGCTCTCCAGTGACATGGATGTCAGATATCTGGCA +
Preference number: 6 (lower is better)
Translates to: PQEQPFFRRHVL*LSSDMDVRYLA
Trigger: TGCCAGATATCTGACATCCATGTCACTGGAGAGTCAGAGGACATGTCTGCGAAAGAAAGGCTGCTCCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS TCA 72 bp TGGTTTGGGCTTTTCTTCTGGGTCACATCTATCTTCTaGGCAGAGAAGGGAGCCTCTAGGTTCCCCTTAGCC +
Preference number: 6 (lower is better)
Translates to: WFGLFFWVTSIF*AEKGASRFPLA
Trigger: GGCTAAGGGGAACCTAGAGGCTCCCTTCTCTGCTCAGAAGATAGATGTGACCCAGAAGAAAAGCCCAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS GCA 72 bp GATGCTGCTTGCGGTGTCTCTGTCAATCACCCCTTCTaGCACAGCTTCTTCAACAGTCATTTTCTGACCGGA +
Preference number: 6 (lower is better)
Translates to: DAACGVSVNHPF*HSFFNSHFLTG
Trigger: TCCGGTCAGAAAATGACTGTTGAAGAAGCTGTGGCAGAAGGGGTGATTGACAGAGACACCGCAAGCAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp GGGGTGACTGTAATGACATTTATCAGGCCCAGCTGCTaGAGCCGAACACTCGTGCTTTTCTTCACTCAAAGC +
Preference number: 6 (lower is better)
Translates to: GVTVMTFIRPSC*SRTLVLFFTQS
Trigger: GCTTTGAGTGAAGAAAAGCACGAGTGTTCGGCTGCAGCAGCTGGGCCTGATAAATGTCATTACAGTCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp TCCGGGGTGACTGTAATGACATTTATCAGGCCCAGCTaGTGCAGCCGAACACTCGTGCTTTTCTTCACTCAA +
Preference number: 6 (lower is better)
Translates to: SGVTVMTFIRPS*CSRTLVLFFTQ
Trigger: TTGAGTGAAGAAAAGCACGAGTGTTCGGCTGCAGCAGCTGGGCCTGATAAATGTCATTACAGTCACCCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp AGTGCCTTCGGCATTAGACAGCGACACACCTTTAGTTaGCATGTGAGTGGACAGACTTGCTTCGTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: SAFGIRQRHTFS*HVSGQTCFVFL
Trigger: GAGGAAGACGAAGCAAGTCTGTCCACTCACATGGCAACTAAAGGTGTGTCGCTGTCTAATGCCGAAGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp GGGACGAGAAGGCGTTCTGTAAACGTTGGTGGCTTTTaGTCAGTTCCTCATGATGTCTTCTGGGAAGGTCAC +
Preference number: 6 (lower is better)
Translates to: GTRRRSVNVGGF*SVPHDVFWEGH
Trigger: GTGACCTTCCCAGAAGACATCATGAGGAACTGAGCAAAAGCCACCAACGTTTACAGAACGCCTTCTCGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS GCA 72 bp AGAATGTCTTCTTGTAGAGCCTTGTGCTGTGAAATCTaGTCCTCCAGCTTTGGTGCCTGGGTTCCTATGGGC +
Preference number: 6 (lower is better)
Translates to: RMSSCRALCCEI*SSSFGAWVPMG
Trigger: GCCCATAGGAACCCAGGCACCAAAGCTGGAGGAGCAGATTTCACAGCACAAGGCTCTACAAGAAGACATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS GCA 72 bp TGTTTCCGGAGGAGAATGTCTTCTTGTAGAGCCTTGTaGTGTGAAATCTGCTCCTCCAGCTTTGGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: CFRRRMSSCRAL*CEICSSSFGAW
Trigger: CCAGGCACCAAAGCTGGAGGAGCAGATTTCACAGCACAAGGCTCTACAAGAAGACATTCTCCTCCGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS GCA 72 bp TCCATGTCCACGGACACGCTCTTATTTTCACCAATCTaGTCCTTGATCTTCTCCACCTCGGCGGAGATGGAT +
Preference number: 6 (lower is better)
Translates to: SMSTDTLLFSPI*SLIFSTSAEMD
Trigger: ATCCATCTCCGCCGAGGTGGAGAAGATCAAGGAGCAGATTGGTGAAAATAAGAGCGTGTCCGTGGACATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp ATCAACTTCAGCTCCATCAGCGGGTCCTGGACTGTGTaGTTGTCTGCCTCCTCTGTTACTTTCTTCAGCAAC +
Preference number: 6 (lower is better)
Translates to: INFSSISGSWTV*LSASSVTFFSN
Trigger: GTTGCTGAAGAAAGTAACAGAGGAGGCAGACAAGCACACAGTCCAGGACCCGCTGATGGAGCTGAAGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp AAGTCCTGGAGGGAGTTGTGGAAGTTCATGGCCAAGTaGAGGGCCTCCTCCAACTTTGTTTTCTTCTCGTTG +
Preference number: 6 (lower is better)
Translates to: KSWRELWKFMAK*RASSNFVFFSL
Trigger: CAACGAGAAGAAAACAAAGTTGGAGGAGGCCCTGCACTTGGCCATGAACTTCCACAACTCCCTCCAGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp AAGATAAGACTTGGCCGAGAAGCCACGTTCAGAGTTTaGTCAGCCTGGGTAAGCCAGTTGATGAAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: KIRLGREATFRV*SAWVSQLMKSW
Trigger: CCAGGACTTCATCAACTGGCTTACCCAGGCTGAGCAAACTCTGAACGTGGCTTCTCGGCCAAGTCTTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp GTGATGTCATCTTCTAAGACCTTGTGCTGTGAAATCTaGTCCTCCAGCTTTGGTGCCTGGGTTCCTATGGGC +
Preference number: 6 (lower is better)
Translates to: VMSSSKTLCCEI*SSSFGAWVPMG
Trigger: GCCCATAGGAACCCAGGCACCAAAGCTGGAGGAGCAGATTTCACAGCACAAGGTCTTAGAAGATGACATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp TCAAAGTACCACACTTGCAAGGAGTCTAGCTTACTCTaGACCAAATCCTTGTCCTCCCTGGAGCTGAGGACC +
Preference number: 6 (lower is better)
Translates to: SKYHTCKESSLL*TKSLSSLELRT
Trigger: GGTCCTCAGCTCCAGGGAGGACAAGGATTTGGTGCAGAGTAAGCTAGACTCCTTGCAAGTGTGGTACTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp GCCGAGTGGCTCCACTCTCAGCAGAAGCATCTGACATaGATTCCTCACTGTGATAGTGTACTTGAGAACTGC +
Preference number: 6 (lower is better)
Translates to: AEWLHSQQKHLT*IPHCDSVLENC
Trigger: GCAGTTCTCAAGTACACTATCACAGTGAGGAATCCATGTCAGATGCTTCTGCTGAGAGTGGAGCCACTCGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp TGCTTCGTCTTCCTCATCAGCTTCAGTGGTAAGTTCTaGATGGCTGCTTCTTTCTGTGTCCCAACCTCCCCT +
Preference number: 6 (lower is better)
Translates to: CFVFLISFSGKF*MAASFCVPTSP
Trigger: AGGGGAGGTTGGGACACAGAAAGAAGCAGCCATCCAGAACTTACCACTGAAGCTGATGAGGAAGACGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp CCGTTTGCACATTCTTCGCTTCACCTTCAAGAGTCATaGTTGTTGTCATGGTTGTTGTGTGCGGAGCCCCTC +
Preference number: 6 (lower is better)
Translates to: PFAHSSLHLQES*LLSWLLCAEPL
Trigger: GAGGGGCTCCGCACACAACAACCATGACAACAACCATGACTCTTGAAGGTGAAGCGAAGAATGTGCAAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp AACTCCACCGTGCCGTCTCCAATCACAAAGGCTTCCTaGTTACTAATTAGGCGGTTTTCAGTCTGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: NSTVPSPITKAS*LLIRRFSVWVR
Trigger: CCTCACCCAGACTGAAAACCGCCTAATTAGTAACCAGGAAGCCTTTGTGATTGGAGACGGCACGGTGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TATCACCTTCATGCAAATAGGTTCCGTTCTGCTCCATaGGTTGTGTGTGCTTCGTCCACACCCCTTCGGAGT +
Preference number: 6 (lower is better)
Translates to: YHLHANRFRSAP*VVCASSTPLRS
Trigger: ACTCCGAAGGGGTGTGGACGAAGCACACACAACCCATGGAGCAGAACGGAACCTATTTGCATGAAGGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp CAAACACCAGAGCTTTGTCCCCTGGTAAGCCATGGCTaGATATCTCTTTCAGGAGGCTGTGCAAAGCTTCGA +
Preference number: 6 (lower is better)
Translates to: QTPELCPLVSHG*ISLSGGCAKLR
Trigger: TCGAAGCTTTGCACAGCCTCCTGAAAGAGATATCCAGCCATGGCTTACCAGGGGACAAAGCTCTGGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GACTCTTCCAGCTTTTGTTGCCTGTCCATGGTCAACTaGTTGAGCTCTTGCCACTTAGTGTCCATCTCTGCC +
Preference number: 6 (lower is better)
Translates to: DSSSFCCLSMVN*LSSCHLVSISA
Trigger: GGCAGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTTGACCATGGACAGGCAACAAAAGCTGGAAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp ACTGGGCCTCTGTGGTCTGGAACTGGGTTAGATTATTaGAGGACTCTTCCAGCTTTTGTTGCCTGTCCATGG +
Preference number: 6 (lower is better)
Translates to: TGPLWSGTGLDY*RTLPAFVACPW
Trigger: CCATGGACAGGCAACAAAAGCTGGAAGAGTCCTCCAATAATCTAACCCAGTTCCAGACCACAGAGGCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TTCCATATGTGCGTTAAGCTGCTCCTTGGCTGTCTCTaGGAGACCTCCCAGAGGTTTAGATGCCAAGAGATG +
Preference number: 6 (lower is better)
Translates to: FHMCVKLLLGCL*ETSQRFRCQEM
Trigger: CATCTCTTGGCATCTAAACCTCTGGGAGGTCTCCCAGAGACAGCCAAGGAGCAGCTTAACGCACATATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp ACGGATTCCCACTTCTCTTTCAGGTTGGTGATGTCTTaGTCAATGTTGGTCTCCGCAGATCGGGGACACCTT +
Preference number: 6 (lower is better)
Translates to: TDSHFSFRLVMS*SMLVSADRGHL
Trigger: AAGGTGTCCCCGATCTGCGGAGACCAACATTGACCAAGACATCACCAACCTGAAAGAGAAGTGGGAATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp CTCCTTGTGCTGGACCAGCTGGGCTTTGATTTTGTCTaGATCGTTGGCGATTTCCAGCTCAGAATCCAGAGA +
Preference number: 6 (lower is better)
Translates to: LLVLDQLGFDFV*IVGDFQLRIQR
Trigger: TCTCTGGATTCTGAGCTGGAAATCGCCAACGATCCAGACAAAATCAAAGCCCAGCTGGTCCAGCACAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GGGAGGTTTTCTCCTTCAGAGAACGTCCAGTTCGGTTaGTGGTATCGTAGACAGAATGTTTGCCTCCGAGTG +
Preference number: 6 (lower is better)
Translates to: GRFSPSENVQFG*WYRRQNVCLRV
Trigger: CACTCGGAGGCAAACATTCTGTCTACGATACCACCAACCGAACTGGACGTTCTCTGAAGGAGAAAACCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GAAGACTTGTCTAATTTGCTGGCAGGTGACCTCCTCTaGGGTGTGGGGATTTTAGAAGGCTTGGCTGTGGAT +
Preference number: 6 (lower is better)
Translates to: EDLSNLLAGDLL*GVGILEGLAVD
Trigger: ATCCACAGCCAAGCCTTCTAAAATCCCCACACCCCAGAGGAGGTCACCTGCCAGCAAATTAGACAAGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TCATCTGCCGAGCGTTTGAACTTATCCGACTCTTCCTaGAGCAGGATCATCTTCCTGTGGGTCATCTGCTCT +
Preference number: 6 (lower is better)
Translates to: SSAERLNLSDSS*SRIIFLWVICS
Trigger: AGAGCAGATGACCCACAGGAAGATGATCCTGCTCCAGGAAGAGTCGGATAAGTTCAAACGCTCGGCAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp TCTCTCCCTGCCGTATCAAAAGCCGACGCGAAGGTGTaGTCTTGGGTTGTGCTCTTCTTTTGGATTTCACAC +
Preference number: 6 (lower is better)
Translates to: SLPAVSKADAKV*SWVVLFFWISH
Trigger: GTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCGGCTTTTGATACGGCAGGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp CCAGTTAGGGGATCGATGATCCCTCCTGTACAGATTTaGGCTTCAAGGCATCTGAGGGCTGTAACCCTATCA +
Preference number: 6 (lower is better)
Translates to: PVRGSMIPPVQI*ASRHLRAVTLS
Trigger: TGATAGGGTTACAGCCCTCAGATGCCTTGAAGCCCAAATCTGTACAGGAGGGATCATCGATCCCCTAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp TTCAGGACTCAAGGGACTTTTGGCAGGATCGAAATATaGCTCTTCTTTCTCAGCCCGCACACAGCCACAGAC +
Preference number: 6 (lower is better)
Translates to: FRTQGTFGRIEI*LFFLSPHTATD
Trigger: GTCTGTGGCTGTGTGCGGGCTGAGAAAGAAGAGCCATATTTCGATCCTGCCAAAAGTCCCTTGAGTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS CCA 72 bp TTCGTTCAGCCTCACCGTGTCATAGATGGACCTCTGTaGGATGTAACAGTCCTCGATATTCAGGTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: FVQPHRVIDGPL*DVTVLDIQVLL
Trigger: GAGGAGGACCTGAATATCGAGGACTGTTACATCCCACAGAGGTCCATCTATGACACGGTGAGGCTGAACGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CAA 72 bp GCCCCACTCCTTCTCGATGTCGTTCGGATGATAACCTaGAAGGAGTTTGATGCGCCCAAACTCGATCCAGAT +
Preference number: 6 (lower is better)
Translates to: APLLLDVVRMIT*KEFDAPKLDPD
Trigger: ATCTGGATCGAGTTTGGGCGCATCAAACTCCTTCAAGGTTATCATCCGAACGACATCGAGAAGGAGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000187486.7
CDS CAA 72 bp ATGAGCTTGGTCTGTTCCGTGGTCAGCATGCGTCCTTaGCTGTACACCGAAGAACATTCGTTCCTTAAGGCC +
Preference number: 6 (lower is better)
Translates to: MSLVCSVVSMRP*LYTEEHSFLKA
Trigger: GGCCTTAAGGAACGAATGTTCTTCGGTGTACAGCAAAGGACGCATGCTGACCACGGAACAGACCAAGCTCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CAA 72 bp AGGTCACTGCAGACGTGTGGCTTTTCTTCTGCCATCTaGGGAACAGCACATGATGTTTGCCCCAAAGCTTCG +
Preference number: 6 (lower is better)
Translates to: RSLQTCGFSSAI*GTAHDVCPKAS
Trigger: CGAAGCTTTGGGGCAAACATCATGTGCTGTTCCCAAGATGGCAGAAGAAAAGCCACACGTCTGCAGTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 72 bp CTTTTGTTGCCTGTCCATGGTCAACTGGTTGAGCTCTaGCCACTTAGTGTCCATCTCTGCCAGTGCCTGCTT +
Preference number: 6 (lower is better)
Translates to: LLLPVHGQLVEL*PLSVHLCQCLL
Trigger: AAGCAGGCACTGGCAGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTTGACCATGGACAGGCAACAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp GAGCTGTTCATACTGAGGTTTCCGGGTGTCGAACTCTaGCAGCAGAATCTGGACCTGCTGCTTCTGTGTGTT +
Preference number: 6 (lower is better)
Translates to: ELFILRFPGVEL*QQNLDLLLLCV
Trigger: AACACACAGAAGCAGCAGGTCCAGATTCTGCTGCAAGAGTTCGACACCCGGAAACCTCAGTATGAACAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp GCGGAAATCGGGGGAGAGTCCCTCTGCTCTTCTTTCTaGGCGTCAAGCCATGCTTGGAAATCCTTAGACATT +
Preference number: 6 (lower is better)
Translates to: AEIGGESLCSSF*ASSHAWKSLDI
Trigger: AATGTCTAAGGATTTCCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGAGGGACTCTCCCCCGATTTCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp CTCTGTTTCCGGAGGAGAATGTCTTCTTGTAGAGCCTaGTGCTGTGAAATCTGCTCCTCCAGCTTTGGTGCC +
Preference number: 6 (lower is better)
Translates to: LCFRRRMSSCRA*CCEICSSSFGA
Trigger: GGCACCAAAGCTGGAGGAGCAGATTTCACAGCACAAGGCTCTACAAGAAGACATTCTCCTCCGGAAACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
CDS CAA 72 bp TGTGGCCCAGTCTTGTTCATCTTATCTATGTGTGGCTaGTGCTCGGCTATCAGTTCTCGAAGTTGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: CGPVLFILSMCG*CSAISSRSCRC
Trigger: GCACCGGCAACTTCGAGAACTGATAGCCGAGCACAAGCCACACATAGATAAGATGAACAAGACTGGGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp CACTTCTCTTTCAGGTTGGTGATGTCTTGGTCAATGTaGGTCTCCGCAGATCGGGGACACCTTGCAAGCATC +
Preference number: 6 (lower is better)
Translates to: HFSFRLVMSWSM*VSADRGHLASI
Trigger: GATGCTTGCAAGGTGTCCCCGATCTGCGGAGACCAACATTGACCAAGACATCACCAACCTGAAAGAGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp CCGTATCAAAAGCCGACGCGAAGGTGTGGTCTTGGGTaGTGCTCTTCTTTTGGATTTCACACTGGAGCCGAA +
Preference number: 6 (lower is better)
Translates to: PYQKPTRRCGLG*CSSFGFHTGAE
Trigger: TTCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCGGCTTTTGATACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp GCCTCTGGCTCTACGCTTTTCTTAAGGAAATCTCCCTaGAGTCCACCAGATGTTCTGCACCCTTCCAGCATC +
Preference number: 6 (lower is better)
Translates to: ASGSTLFLRKSP*SPPDVLHPSSI
Trigger: GATGCTGGAAGGGTGCAGAACATCTGGTGGACTCAAGGGAGATTTCCTTAAGAAAAGCGTAGAGCCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp TCAGATATCTGGCATCCATCATCCCTAGGTGCATCCTaGGAGACAGAGGACACACCAGAAGAGAGGGAATGG +
Preference number: 6 (lower is better)
Translates to: SDIWHPSSLGAS*ETEDTPEEREW
Trigger: CCATTCCCTCTCTTCTGGTGTGTCCTCTGTCTCCAAGGATGCACCTAGGGATGATGGATGCCAGATATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS CAA 72 bp CTCAGCTCAAATATGCTGGAAGAAGAAAGGGCACCATaGGAGCACAGAGAGCTAACGTCCAGTGTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: LSSNMLEEERAP*EHRELTSSVLW
Trigger: CCACAGGACACTGGACGTTAGCTCTCTGTGCTCCAATGGTGCCCTTTCTTCTTCCAGCATATTTGAGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CAA 90 bp CTTGCTATCACCTTCATGCAAATAGGTTCCGTTCTGCTCCATGGGTaGTGTGTGCTTCGTCCACACCCCTTCGGAGTCTTCCTCAACATT +
Preference number: 6 (lower is better)
Translates to: LAITFMQIGSVLLHG*CVLRPHPFGVFLNI
Trigger: AATGTTGAGGAAGACTCCGAAGGGGTGTGGACGAAGCACACACAACCCATGGAGCAGAACGGAACCTATTTGCATGAAGGTGATAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp GAGCCCGGAGAGAAGGCCGCAGGAAGCATCTTCATACTGCTGGTATaGATCCACCAGGTCTTTGAGGTTATTTCCAAGAACACTGCACTT +
Preference number: 6 (lower is better)
Translates to: EPGEKAAGSIFILLV*IHQVFEVISKNTAL
Trigger: AAGTGCAGTGTTCTTGGAAATAACCTCAAAGACCTGGTGGATCAATACCAGCAGTATGAAGATGCTTCCTGCGGCCTTCTCTCCGGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TGTCCTTGCAAAGCCTTGGTCTCTTCCAGCTGCCTTTGCAGATTTTaGGGGTCCAAAGCAATGGGCTCCCGTAAATGTTTGCTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: CPCKALVSSSCLCRF*GSKAMGSRKCLLAL
Trigger: CAAAGCCAGCAAACATTTACGGGAGCCCATTGCTTTGGACCCCAAAAATCTGCAAAGGCAGCTGGAAGAGACCAAGGCTTTGCAAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp CAGGCTGTGCTGACATCTGTCTATCCACGGCCGCAGAGTCTCCACTaGCTCTCTGTACTTGAGGGCTTTTTCCAACGAGTCTTTCAATTT +
Preference number: 6 (lower is better)
Translates to: QAVLTSVYPRPQSLH*LSVLEGFFQRVFQF
Trigger: AAATTGAAAGACTCGTTGGAAAAAGCCCTCAAGTACAGAGAGCAAGTGGAGACTCTGCGGCCGTGGATAGACAGATGTCAGCACAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TTTGCTCTTCACGGATTCCCACTTCTCTTTCAGGTTGGTGATGTCTaGGTCAATGTTGGTCTCCGCAGATCGGGGACACCTTGCAAGCAT +
Preference number: 6 (lower is better)
Translates to: FALHGFPLLFQVGDV*VNVGLRRSGTPCKH
Trigger: ATGCTTGCAAGGTGTCCCCGATCTGCGGAGACCAACATTGACCAAGACATCACCAACCTGAAAGAGAAGTGGGAATCCGTGAAGAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp ATCAAAAGCCGACGCGAAGGTGTGGTCTTGGGTTGTGCTCTTCTTTaGGATTTCACACTGGAGCCGAAGCAACTGGTGCTCATGTTCCTT +
Preference number: 6 (lower is better)
Translates to: IKSRREGVVLGCALL*DFTLEPKQLVLMFL
Trigger: AAGGAACATGAGCACCAGTTGCTTCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCGGCTTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp GACACGGACGCCTCTCACAGGGTCAATGACGCCCCCACTGGCAATTaGTGCCTCCAAGATATGTTTACCTTTCTTCCTATCAAGCATTCT +
Preference number: 6 (lower is better)
Translates to: DTDASHRVNDAPTGN*CLQDMFTFLPIKHS
Trigger: AGAATGCTTGATAGGAAGAAAGGTAAACATATCTTGGAGGCACAAATTGCCAGTGGGGGCGTCATTGACCCTGTGAGAGGCGTCCGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp GGGACACGCACTCTAGATGGACTTTCTGAGCCTTTCTaGACAACTGTTGTATCTGCTAGGTTTTCTGGCCGC +
Preference number: 6 (lower is better)
Translates to: GTRTLDGLSEPF*TTVVSARFSGR
Trigger: GCGGCCAGAAAACCTAGCAGATACAACAGTTGTTCAGAAAGGCTCAGAAAGTCCATCTAGAGTGCGTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp TCGGCATTAGACAGCGACACACCTTTAGTTGCCATGTaGGTGGACAGACTTGCTTCGTCTTCCTCATCAGCT +
Preference number: 6 (lower is better)
Translates to: SALDSDTPLVAM*VDRLASSSSSA
Trigger: AGCTGATGAGGAAGACGAAGCAAGTCTGTCCACTCACATGGCAACTAAAGGTGTGTCGCTGTCTAATGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp GAAGCTTCTGTTCCTGTATCTGGGCCTTCACTACTTTaGACTCAGCGGACGGAGGCTTTTGATTGGCCACAA +
Preference number: 6 (lower is better)
Translates to: EASVPVSGPSLL*TQRTEAFDWPQ
Trigger: TTGTGGCCAATCAAAAGCCTCCGTCCGCTGAGTTCAAAGTAGTGAAGGCCCAGATACAGGAACAGAAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 72 bp ATCCGAACCAGTCGCAGCTGCTGGGAGTCTCCAAACTaGTTTCCCAGGAAGAACCTGTATTTGTTATCACCG +
Preference number: 6 (lower is better)
Translates to: IRTSRSCWESPN*FPRKNLYLLSP
Trigger: CGGTGATAACAAATACAGGTTCTTCCTGGGAAATCAGTTTGGAGACTCCCAGCAGCTGCGACTGGTTCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp GTCTGCTTATGCAAGTGTTCGTTGGTGTTCCGTAACTaGTCCTTAAAACCGTCTGCCTGGATCCGCAGCACT +
Preference number: 6 (lower is better)
Translates to: VCLCKCSLVFRN*SLKPSAWIRST
Trigger: AGTGCTGCGGATCCAGGCAGACGGTTTTAAGGATCAGTTACGGAACACCAACGAACACTTGCATAAGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp TTCTCTCTGGAGAGACACAAAGTCGTGCTTGATGCCTaGGAGATCGGTTTCAGTGACGACCTTGGACTCCAT +
Preference number: 6 (lower is better)
Translates to: FSLERHKVVLDA*EIGFSDDLGLH
Trigger: ATGGAGTCCAAGGTCGTCACTGAAACCGATCTCTCAGGCATCAAGCACGACTTTGTGTCTCTCCAGAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp AGTGATAGAATTCTGGCTGCACCCGGCTGTTTTTCTTaGTCCTTCGCTTCCTCCCCGATGACTCTTGTTCAC +
Preference number: 6 (lower is better)
Translates to: SDRILAAPGCFS*SFASSPMTLVH
Trigger: GTGAACAAGAGTCATCGGGGAGGAAGCGAAGGATCAAGAAAAACAGCCGGGTGCAGCCAGAATTCTATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS GCA 72 bp TGCCACCTTTCGACAAGCTGGTCTGCCTTTTCTTTGTaGCAGTCAAAGTCAAGGTCCCGTTCTTTGTGTGTC +
Preference number: 6 (lower is better)
Translates to: CHLSTSWSAFSL*QSKSRSRSLCV
Trigger: GACACACAAAGAACGGGACCTTGACTTTGACTGGCACAAAGAAAAGGCAGACCAGCTTGTCGAAAGGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 72 bp ACGGGGATCGAGGTCGGCGATGCAGTAGAAATGAGCTaGTTTGCTCGATTTAGTTCTTTTAGTTGGCGCAGA +
Preference number: 6 (lower is better)
Translates to: TGIEVGDAVEMS*FARFSSFSWRR
Trigger: TCTGCGCCAACTAAAAGAACTAAATCGAGCAAAGCAGCTCATTTCTACTGCATCGCCGACCTCGATCCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp AAACATGGTTTCTCGGTCTATGAGTCCCTCGTGAGCTaGTCTCAGGATGCTAACGCTTCTTCCACACTTCAG +
Preference number: 6 (lower is better)
Translates to: KHGFSVYESLVS*SQDANASSTLQ
Trigger: CTGAAGTGTGGAAGAAGCGTTAGCATCCTGAGAGCAGCTCACGAGGGACTCATAGACCGAGAAACCATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp AGCTGCGCACACTTCATCTTCACCTCGTTCAGTTTCTaGTCAATCAAAGCTCTATCCGCTTGGGACAACTCG +
Preference number: 6 (lower is better)
Translates to: SCAHFIFTSFSF*SIKALSAWDNS
Trigger: CGAGTTGTCCCAAGCGGATAGAGCTTTGATTGAGCAGAAACTGAACGAGGTGAAGATGAAGTGTGCGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp GATATCTGTCCTTGCAAAGCCTTGGTCTCTTCCAGCTaGCTTTGCAGATTTTTGGGGTCCAAAGCAATGGGC +
Preference number: 6 (lower is better)
Translates to: DICPCKALVSSS*LCRFLGSKAMG
Trigger: GCCCATTGCTTTGGACCCCAAAAATCTGCAAAGGCAGCTGGAAGAGACCAAGGCTTTGCAAGGACAGATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp GGTCTGTTCCAATGGGAGACATTGTGGCTAACTTGTTaGCTGCGATGTCAACCCAGTCGAATATTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: GLFQWETLWLTC*LRCQPSRIFPA
Trigger: TGCAGGGAATATTCGACTGGGTTGACATCGCAGGCAACAAGTTAGCCACAATGTCTCCCATTGGAACAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp TTCACTCAGCATGTTGTCCAGCTTCAGGTTGTCATCTaGCAGGGAGGTTTTCTCCTTCAGAGAACGTCCAGT +
Preference number: 6 (lower is better)
Translates to: FTQHVVQLQVVI*QGGFLLQRTSS
Trigger: ACTGGACGTTCTCTGAAGGAGAAAACCTCCCTGGCAGATGACAACCTGAAGCTGGACAACATGCTGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp TGGGGCTCAACTCGATACAGCCAATCAATGAGGGCCTaGAGGGCATCTGTGAACTGTCCAGAAAATAACAGA +
Preference number: 6 (lower is better)
Translates to: WGSTRYSQSMRA*RASVNCPENNR
Trigger: TCTGTTATTTTCTGGACAGTTCACAGATGCCCTGCAGGCCCTCATTGATTGGCTGTATCGAGTTGAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp ACTTGGAATCGCTTGGCACACTTACACTTGGCTACCTaGCTTGTGACCTCGTCCTCAATTTTGTCAGCATCC +
Preference number: 6 (lower is better)
Translates to: TWNRLAHLHLAT*LVTSSSILSAS
Trigger: GGATGCTGACAAAATTGAGGACGAGGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS GCA 72 bp TATCAAAAGCCGACGCGAAGGTGTGGTCTTGGGTTGTaGTCTTCTTTTGGATTTCACACTGGAGCCGAAGCA +
Preference number: 6 (lower is better)
Translates to: YQKPTRRCGLGL*SSFGFHTGAEA
Trigger: TGCTTCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCGGCTTTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp TGCTGCTGGACCTGTCACAGCTGTACTTGCGCTGGATaGCATCTTTCAGATTCCTTAGGTAATCAGTGGCTT +
Preference number: 6 (lower is better)
Translates to: CCWTCHSCTCAG*HLSDSLGNQWL
Trigger: AAGCCACTGATTACCTAAGGAATCTGAAAGATGCCATCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 72 bp ACTGAAGGGTTCTACCTCGGCTTCTCCTACAGCTTGTaGGTTCAGGGGACAGTGATGTCCTTCTTTGTTTCT +
Preference number: 6 (lower is better)
Translates to: TEGFYLGFSYSL*VQGTVMSFFVS
Trigger: AGAAACAAAGAAGGACATCACTGTCCCCTGAACCCACAAGCTGTAGGAGAAGCCGAGGTAGAACCCTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp GCTGTGTTGTTCAGTAGTTCCAGCATACCAAAGTGGTaGTCCATTTCCTTCTGCAGGGACTTTAACTCGGCG +
Preference number: 6 (lower is better)
Translates to: AVLFSSSSIPKW*SISFCRDFNSA
Trigger: CGCCGAGTTAAAGTCCCTGCAGAAGGAAATGGACCACCACTTTGGTATGCTGGAACTACTGAACAACACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TTCTGGGCCATGTTCTCCAGGGAGACTGTCTTACTTTaGAGCTGCTCAGTGACCCTGTTTACCTTTTCCATC +
Preference number: 6 (lower is better)
Translates to: FWAMFSRETVLL*SCSVTLFTFSI
Trigger: GATGGAAAAGGTAAACAGGGTCACTGAGCAGCTCCAAAGTAAGACAGTCTCCCTGGAGAACATGGCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GGATGGTATTCTGGAAGTGGCCGAGACCCTGGAGCTTaGTTTCTAAGAAAGAACACTTCTCGTCCACCTGTT +
Preference number: 6 (lower is better)
Translates to: GWYSGSGRDPGA*FLRKNTSRPPV
Trigger: AACAGGTGGACGAGAAGTGTTCTTTCTTAGAAACCAAGCTCCAGGGTCTCGGCCACTTCCAGAATACCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp ATCTCTCGGATGGTATTCTGGAAGTGGCCGAGACCCTaGAGCTTGGTTTCTAAGAAAGAACACTTCTCGTCC +
Preference number: 6 (lower is better)
Translates to: ISRMVFWKWPRP*SLVSKKEHFSS
Trigger: GGACGAGAAGTGTTCTTTCTTAGAAACCAAGCTCCAGGGTCTCGGCCACTTCCAGAATACCATCCGAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp ACCAGCGTGTGGATGCTTCCCCAGATGAAAACCATTTaGTCCAACTTATCCTGTACAGCTCTGGCAGATACG +
Preference number: 6 (lower is better)
Translates to: TSVWMLPQMKTI*SNLSCTALADT
Trigger: CGTATCTGCCAGAGCTGTACAGGATAAGTTGGACCAAATGGTTTTCATCTGGGGAAGCATCCACACGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CCA 72 bp TCTGCTGGATGGCTTGCTTCTCGCGGACTATGTTCTTaGACTCTGCCTGAATCCTCTGCATCATCAATTTGG +
Preference number: 6 (lower is better)
Translates to: SAGWLASRGLCS*TLPESSASSIW
Trigger: CCAAATTGATGATGCAGAGGATTCAGGCAGAGTCCAAGAACATAGTCCGCGAGAAGCAAGCCATCCAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp TCCTCTGACTCTCCAGTGACATGGATGTCAGATATCTaGCATCCATCATCCCTAGGTGCATCCTTGGAGACA +
Preference number: 6 (lower is better)
Translates to: SSDSPVTWMSDI*HPSSLGASLET
Trigger: TGTCTCCAAGGATGCACCTAGGGATGATGGATGCCAGATATCTGACATCCATGTCACTGGAGAGTCAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS CAA 72 bp CTCTGCCACCTTTCGACAAGCTGGTCTGCCTTTTCTTaGTGCCAGTCAAAGTCAAGGTCCCGTTCTTTGTGT +
Preference number: 6 (lower is better)
Translates to: LCHLSTSWSAFS*CQSKSRSRSLC
Trigger: ACACAAAGAACGGGACCTTGACTTTGACTGGCACAAAGAAAAGGCAGACCAGCTTGTCGAAAGGTGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CAA 72 bp TGTGACTGGCTCTTCGCCATCAGAACCACCCTCTTCTaGCCTGTAATCATGAACTGTGGATGGCTGGAGTTT +
Preference number: 6 (lower is better)
Translates to: CDWLFAIRTTLF*PVIMNCGWLEF
Trigger: AAACTCCAGCCATCCACAGTTCATGATTACAGGCAAGAAGAGGGTGGTTCTGATGGCGAAGAGCCAGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 72 bp TCTTCCAGCTTTTGTTGCCTGTCCATGGTCAACTGGTaGAGCTCTTGCCACTTAGTGTCCATCTCTGCCAGT +
Preference number: 6 (lower is better)
Translates to: SSSFCCLSMVNW*SSCHLVSISAS
Trigger: ACTGGCAGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTTGACCATGGACAGGCAACAAAAGCTGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp AACTGGGCCTCTGTGGTCTGGAACTGGGTTAGATTATaGGAGGACTCTTCCAGCTTTTGTTGCCTGTCCATG +
Preference number: 6 (lower is better)
Translates to: NWASVVWNWVRL*EDSSSFCCLSM
Trigger: CATGGACAGGCAACAAAAGCTGGAAGAGTCCTCCAATAATCTAACCCAGTTCCAGACCACAGAGGCCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp CTTCTGGGCCATGTTCTCCAGGGAGACTGTCTTACTTaGGAGCTGCTCAGTGACCCTGTTTACCTTTTCCAT +
Preference number: 6 (lower is better)
Translates to: LLGHVLQGDCLT*ELLSDPVYLFH
Trigger: ATGGAAAAGGTAAACAGGGTCACTGAGCAGCTCCAAAGTAAGACAGTCTCCCTGGAGAACATGGCCCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp CAGGGCACCAGTTCCAACAAGGCACTGCTCACTTCATaGAGAGAATCCACTAAGGCTTTGTTGCTCCTGACT +
Preference number: 6 (lower is better)
Translates to: QGTSSNKALLTS*RESTKALLLLT
Trigger: AGTCAGGAGCAACAAAGCCTTAGTGGATTCTCTCAATGAAGTGAGCAGTGCCTTGTTGGAACTGGTGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp TCCTTTGGGCTCAGTTCCAATAGCTGTGGCCCAGTCTaGTTCATCTTATCTATGTGTGGCTTGTGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: SFGLSSNSCGPV*FILSMCGLCSA
Trigger: AGCCGAGCACAAGCCACACATAGATAAGATGAACAAGACTGGGCCACAGCTATTGGAACTGAGCCCAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp GACCAGCGTGTGGATGCTTCCCCAGATGAAAACCATTaGGTCCAACTTATCCTGTACAGCTCTGGCAGATAC +
Preference number: 6 (lower is better)
Translates to: DQRVDASPDENH*VQLILYSSGRY
Trigger: GTATCTGCCAGAGCTGTACAGGATAAGTTGGACCAAATGGTTTTCATCTGGGGAAGCATCCACACGCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp AGGTCTGTTCCAATGGGAGACATTGTGGCTAACTTGTaGCCTGCGATGTCAACCCAGTCGAATATTCCCTGC +
Preference number: 6 (lower is better)
Translates to: RSVPMGDIVANL*PAMSTQSNIPC
Trigger: GCAGGGAATATTCGACTGGGTTGACATCGCAGGCAACAAGTTAGCCACAATGTCTCCCATTGGAACAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp TCCAGGTCTGTTCCAATGGGAGACATTGTGGCTAACTaGTTGCCTGCGATGTCAACCCAGTCGAATATTCCC +
Preference number: 6 (lower is better)
Translates to: SRSVPMGDIVAN*LPAMSTQSNIP
Trigger: GGGAATATTCGACTGGGTTGACATCGCAGGCAACAAGTTAGCCACAATGTCTCCCATTGGAACAGACCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp CACTTGGCTACCTGCCTTGTGACCTCGTCCTCAATTTaGTCAGCATCCGTGATGGGTTTGTACGCATCTTTG +
Preference number: 6 (lower is better)
Translates to: HLATCLVTSSSI*SASVMGLYASL
Trigger: CAAAGATGCGTACAAACCCATCACGGATGCTGACAAAATTGAGGACGAGGTCACAAGGCAGGTAGCCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CAA 72 bp TTGAGATCGTTTGCTTCCTGCCTGACCTCTTCAGCTTaGTCTGTTGTTTGGTTCAGCTGCCTGCCAAGGTCT +
Preference number: 6 (lower is better)
Translates to: LRSFASCLTSSA*SVVWFSCLPRS
Trigger: AGACCTTGGCAGGCAGCTGAACCAAACAACAGACAAAGCTGAAGAGGTCAGGCAGGAAGCAAACGATCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp CGGAAGTTTTCTCTCTGGAGAGACACAAAGTCGTGCTaGATGCCTGAGAGATCGGTTTCAGTGACGACCTTG +
Preference number: 6 (lower is better)
Translates to: RKFSLWRDTKSC*MPERSVSVTTL
Trigger: CAAGGTCGTCACTGAAACCGATCTCTCAGGCATCAAGCACGACTTTGTGTCTCTCCAGAGAGAAAACTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp GCCTCTCACAGGGTCAATGACGCCCCCACTGGCAATTaGTGCCTCCAAGATATGTTTACCTTTCTTCCTATC +
Preference number: 6 (lower is better)
Translates to: ASHRVNDAPTGN*CLQDMFTFLPI
Trigger: GATAGGAAGAAAGGTAAACATATCTTGGAGGCACAAATTGCCAGTGGGGGCGTCATTGACCCTGTGAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp ACATTCCCTACTGTGTGCTGTGGTTTGGGACTCCCCTaGTCTCAAAGTTTTCTCCTGGTCTTCAGAGCTGGA +
Preference number: 6 (lower is better)
Translates to: TFPTVCCGLGLP*SQSFLLVFRAG
Trigger: TCCAGCTCTGAAGACCAGGAGAAAACTTTGAGACAAGGGGAGTCCCAAACCACAGCACACAGTAGGGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CAA 90 bp GCTCTGAGCTGTGACTGGCTCTTCGCCATCAGAACCACCCTCTTCTaGCCTGTAATCATGAACTGTGGATGGCTGGAGTTTACAAAAAGA +
Preference number: 6 (lower is better)
Translates to: ALSCDWLFAIRTTLF*PVIMNCGWLEFTKR
Trigger: TCTTTTTGTAAACTCCAGCCATCCACAGTTCATGATTACAGGCAAGAAGAGGGTGGTTCTGATGGCGAAGAGCCAGTCACAGCTCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 90 bp GTACCTCTGCGGTTTTCTTCAGCTTCTCTACAGCAACCTGCTGACTaGATATCTGTCCTTGCAAAGCCTTGGTCTCTTCCAGCTGCCTTT +
Preference number: 6 (lower is better)
Translates to: VPLRFSSASLQQPAD*ISVLAKPWSLPAAF
Trigger: AAAGGCAGCTGGAAGAGACCAAGGCTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCTGTAGAGAAGCTGAAGAAAACCGCAGAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp CGGGTCAGAGTGATCTGGAGCTTTTCATTCCGTTCGTTCACACACTaGGACAGATCATCGTATCTCCCGACAATGTCATCAAGCGTCTTC +
Preference number: 6 (lower is better)
Translates to: RVRVIWSFSFRSFTH*DRSSYLPTMSSSVF
Trigger: GAAGACGCTTGATGACATTGTCGGGAGATACGATGATCTGTCCAAGTGTGTGAACGAACGGAATGAAAAGCTCCAGATCACTCTGACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp CACTGTTTTAACTGGGCCTCTGTGGTCTGGAACTGGGTTAGATTATaGGAGGACTCTTCCAGCTTTTGTTGCCTGTCCATGGTCAACTGG +
Preference number: 6 (lower is better)
Translates to: HCFNWASVVWNWVRL*EDSSSFCCLSMVNW
Trigger: CCAGTTGACCATGGACAGGCAACAAAAGCTGGAAGAGTCCTCCAATAATCTAACCCAGTTCCAGACCACAGAGGCCCAGTTAAAACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp GCTTCTTTATCTACCTCGCAGACGCTGAGCAGGCTATTGGCTGTGTaGTTCAGTAGTTCCAGCATACCAAAGTGGTGGTCCATTTCCTTC +
Preference number: 6 (lower is better)
Translates to: ASLSTSQTLSRLLAV*FSSSSIPKWWSISF
Trigger: GAAGGAAATGGACCACCACTTTGGTATGCTGGAACTACTGAACAACACAGCCAATAGCCTGCTCAGCGTCTGCGAGGTAGATAAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TTCATGGCCAAGTGCAGGGCCTCCTCCAACTTTGTTTTCTTCTCGTaGAGTTTGCTCTTCACGGATTCCCACTTCTCTTTCAGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: FMAKCRASSNFVFFS*SLLFTDSHFSFRLV
Trigger: CACCAACCTGAAAGAGAAGTGGGAATCCGTGAAGAGCAAACTCAACGAGAAGAAAACAAAGTTGGAGGAGGCCCTGCACTTGGCCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp CCGACTCTGCACGCTGATGAGCAGGTTCTTGATGAGCACGACATCTaGTTTCTGACTGAAATACTTCAGGTGGGTTCCAGTCTTGTCCAA +
Preference number: 6 (lower is better)
Translates to: PTLHADEQVLDEHDI*FLTEILQVGSSLVQ
Trigger: TTGGACAAGACTGGAACCCACCTGAAGTATTTCAGTCAGAAACAAGATGTCGTGCTCATCAAGAACCTGCTCATCAGCGTGCAGAGTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TCCCATTTGTCCCTAAGTTCACTCAGCATGTTGTCCAGCTTCAGGTaGTCATCTGCCAGGGAGGTTTTCTCCTTCAGAGAACGTCCAGTT +
Preference number: 6 (lower is better)
Translates to: SHLSLSSLSMLSSFR*SSAREVFSFRERPV
Trigger: AACTGGACGTTCTCTGAAGGAGAAAACCTCCCTGGCAGATGACAACCTGAAGCTGGACAACATGCTGAGTGAACTTAGGGACAAATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp GCACACTTACACTTGGCTACCTGCCTTGTGACCTCGTCCTCAATTTaGTCAGCATCCGTGATGGGTTTGTACGCATCTTTGTTTGGATGC +
Preference number: 6 (lower is better)
Translates to: AHLHLATCLVTSSSI*SASVMGLYASLFGC
Trigger: GCATCCAAACAAAGATGCGTACAAACCCATCACGGATGCTGACAAAATTGAGGACGAGGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CAA 90 bp CGGATGACACGGGAAAGTCGGGGCATTCTGCTGCTTTACAGGGAGTaGACATTTTGCTGTTTGCCAACCATGGTTTACCATAATTGCGTG +
Preference number: 6 (lower is better)
Translates to: RMTRESRGILLLYRE*TFCCLPTMVYHNCV
Trigger: CACGCAATTATGGTAAACCATGGTTGGCAAACAGCAAAATGTCAACTCCCTGTAAAGCAGCAGAATGCCCCGACTTTCCCGTGTCATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TCCATTAGCTTCTCCATCTTCTTCCGAAACTCATCTGCCGAGCGTTaGAACTTATCCGACTCTTCCTGGAGCAGGATCATCTTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: SISFSIFFRNSSAER*NLSDSSWSRIIFLW
Trigger: CCACAGGAAGATGATCCTGCTCCAGGAAGAGTCGGATAAGTTCAAACGCTCGGCAGATGAGTTTCGGAAGAAGATGGAGAAGCTAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp ACAAAGTCGTGCTTGATGCCTGAGAGATCGGTTTCAGTGACGACCTaGGACTCCATTAGCTTCTCCATCTTCTTCCGAAACTCATCTGCC +
Preference number: 6 (lower is better)
Translates to: TKSCLMPERSVSVTT*DSISFSIFFRNSSA
Trigger: GGCAGATGAGTTTCGGAAGAAGATGGAGAAGCTAATGGAGTCCAAGGTCGTCACTGAAACCGATCTCTCAGGCATCAAGCACGACTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp AGGATCCGAACCAGTCGCAGCTGCTGGGAGTCTCCAAACCTGTATTaGTTATCACCGATCTGTTCAACTTGGAATCGCTTGGCACACTTA +
Preference number: 6 (lower is better)
Translates to: RIRTSRSCWESPNLY*LSPICSTWNRLAHL
Trigger: TAAGTGTGCCAAGCGATTCCAAGTTGAACAGATCGGTGATAACAAATACAGGTTTGGAGACTCCCAGCAGCTGCGACTGGTTCGGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182507.4
ENSMUST00000183100.8
CDS TCA 72 bp CCACAGGAGCAGCCTTTCTTTCGCAGACATGTCCTCTaGCTCTCCAGTGACATGGATGTCAGATATCTGAAA +
Preference number: 6 (lower is better)
Translates to: PQEQPFFRRHVL*LSSDMDVRYLK
Trigger: TTTCAGATATCTGACATCCATGTCACTGGAGAGTCAGAGGACATGTCTGCGAAAGAAAGGCTGCTCCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182314.8
ENSMUST00000182697.8
ENSMUST00000183034.5
ENSMUST00000187486.7
ENSMUST00000239001.2
CDS TCA 72 bp CAACTCATAGTCCTTGACGGCAGCCGAGTACTGCTCTaGGTATTTCTGACACTCGTCCATTTTGCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: QLIVLDGSRVLL*VFLTLVHFALL
Trigger: AAGCAGAGCAAAATGGACGAGTGTCAGAAATACTCAGAGCAGTACTCGGCTGCCGTCAAGGACTATGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 72 bp TCTTCAGCTTTTAGAATGCCTGTAGAGTCTGGCCCTTaGACCAACCTGATTTCTTCTGAGGCAGTGCCTTCG +
Preference number: 6 (lower is better)
Translates to: SSAFRMPVESGP*TNLISSEAVPS
Trigger: CGAAGGCACTGCCTCAGAAGAAATCAGGTTGGTTCAAGGGCCAGACTCTACAGGCATTCTAAAAGCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp TTTGGCTGGGAGACAGATCTTGTGCATAATCAGAGATaGAGGACTGTACGTCAAAGGCCGTCGTTTCCAGCT +
Preference number: 6 (lower is better)
Translates to: FGWETDLVHNQR*RTVRQRPSFPA
Trigger: AGCTGGAAACGACGGCCTTTGACGTACAGTCCTTCATCTCTGATTATGCACAAGATCTGTCTCCCAGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS TCA 72 bp ATTTCTGAAACTCCTTGTGCTGGACCAGCTGGGCTTTaGTTTTGTCTGGATCGTTGGCGATTTCCAGCTCAG +
Preference number: 6 (lower is better)
Translates to: ISETPCAGPAGL*FCLDRWRFPAQ
Trigger: CTGAGCTGGAAATCGCCAACGATCCAGACAAAATCAAAGCCCAGCTGGTCCAGCACAAGGAGTTTCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp TCTCCATCTTCTTCCGAAACTCATCTGCCGAGCGTTTaGACTTATCCGACTCTTCCTGGAGCAGGATCATCT +
Preference number: 6 (lower is better)
Translates to: SPSSSETHLPSV*TYPTLPGAGSS
Trigger: AGATGATCCTGCTCCAGGAAGAGTCGGATAAGTTCAAACGCTCGGCAGATGAGTTTCGGAAGAAGATGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp TTTGAGGGACTTCTCTGTGACACAGAGAATGGGACTTaGGCTGGCTGCCGTTTGGGAAAGAGAAACATTGTC +
Preference number: 6 (lower is better)
Translates to: FEGLLCDTENGT*AGCRLGKRNIV
Trigger: GACAATGTTTCTCTTTCCCAAACGGCAGCCAGCTCAAGTCCCATTCTCTGTGTCACAGAGAAGTCCCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS GCA 72 bp CGATTCCTAGGAACTGGTCTTGAAACTTTTCTCTTGTaGTCTGATCAGCCAACACTCTCTGGTCACTGGGTG +
Preference number: 6 (lower is better)
Translates to: RFLGTGLETFLL*SDQPTLSGHWV
Trigger: CACCCAGTGACCAGAGAGTGTTGGCTGATCAGAGCACAAGAGAAAAGTTTCAAGACCAGTTCCTAGGAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp CAGCAGTTGTCTGCTTTGGCTGGGAGACAGATCTTGTaGATAATCAGAGATGAAGGACTGTACGTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: QQLSALAGRQIL*IIRDEGLYVKG
Trigger: GCCTTTGACGTACAGTCCTTCATCTCTGATTATGCACAAGATCTGTCTCCCAGCCAAAGCAGACAACTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS GCA 72 bp AGAAACGTCTGGAGCTTGTCTGAGAGCTTCTCAAACTaGTCTACTTTGGCCTTTAGCTCCACCATCTTGGCT +
Preference number: 6 (lower is better)
Translates to: RNVWSLSESFSN*STLAFSSTILA
Trigger: AGCCAAGATGGTGGAGCTAAAGGCCAAAGTAGAGCAGTTTGAGAAGCTCTCAGACAAGCTCCAGACGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp TTCAGTTCTGCCTCAAATGACTTGTTCTGCTCCACCTaGAACTTCACAGACTCAGTGTCTGCAGGTGTAGGT +
Preference number: 6 (lower is better)
Translates to: FSSASNDLFCST*NFTDSVSAGVG
Trigger: ACCTACACCTGCAGACACTGAGTCTGTGAAGTTGCAGGTGGAGCAGAACAAGTCATTTGAGGCAGAACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp AGTTCCAGCATACCAAAGTGGTGGTCCATTTCCTTCTaGAGGGACTTTAACTCGGCGATGGAACTCTCTGAT +
Preference number: 6 (lower is better)
Translates to: SSSIPKWWSISF*RDFNSAMELSD
Trigger: ATCAGAGAGTTCCATCGCCGAGTTAAAGTCCCTGCAGAAGGAAATGGACCACCACTTTGGTATGCTGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp GCCATGTTCTCCAGGGAGACTGTCTTACTTTGGAGCTaGTCAGTGACCCTGTTTACCTTTTCCATCAATGAC +
Preference number: 6 (lower is better)
Translates to: AMFSRETVLLWS*SVTLFTFSIND
Trigger: GTCATTGATGGAAAAGGTAAACAGGGTCACTGAGCAGCTCCAAAGTAAGACAGTCTCCCTGGAGAACATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp GCTTCTGACTTAAATTGCTTCAGCTCTTCAATCTGCTaGTTGACGGTCTCCAGGTCTGTTCCAATGGGAGAC +
Preference number: 6 (lower is better)
Translates to: ASDLNCFSSSIC*LTVSRSVPMGD
Trigger: GTCTCCCATTGGAACAGACCTGGAGACCGTCAAGCAGCAGATTGAAGAGCTGAAGCAATTTAAGTCAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS GCA 72 bp CTCACCTCCTTCTCCGTTTTCTGGATGATCATGCTCTaGTGGTCACACTTTTGCTTGAACTCGCTTACTAGG +
Preference number: 6 (lower is better)
Translates to: LTSFSVFWMIML*WSHFCLNSLTR
Trigger: CCTAGTAAGCGAGTTCAAGCAAAAGTGTGACCAGCAGAGCATGATCATCCAGAAAACGGAGAAGGAGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp AAGGGGTTAAACTCTGGGTTAGCCCTGAGTTCAGGCTaGGGTGTAAGGTTTGTGCAAATCCTGAGTTTAAGC +
Preference number: 6 (lower is better)
Translates to: KGLNSGLALSSG*GVRFVQILSLS
Trigger: GCTTAAACTCAGGATTTGCACAAACCTTACACCCCAGCCTGAACTCAGGGCTAACCCAGAGTTTAACCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 72 bp AATTCTGTTGGCAAAGTCAACTGCTTCTTTGTTTGGTaGGGGAACAGTAAAGCACACAGACGGGACCATGGC +
Preference number: 6 (lower is better)
Translates to: NSVGKVNCFFVW*GNSKAHRRDHG
Trigger: GCCATGGTCCCGTCTGTGTGCTTTACTGTTCCCCCACCAAACAAAGAAGCAGTTGACTTTGCCAACAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 72 bp GAGGAGCTACTAAGGCACAGCTTGGGGTATGTTCGTTaGGTTCCAGCATATCCACGTGTATACACTTATCAC +
Preference number: 6 (lower is better)
Translates to: EELLRHSLGYVR*VPAYPRVYTYH
Trigger: GTGATAAGTGTATACACGTGGATATGCTGGAACCCAACGAACATACCCCAAGCTGTGCCTTAGTAGCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp GACCCAAGGCCTCTTTGCTCTGGATCACAGTCCATCTaGGTTAATACTTTAGCTAACTCAGAGATGCCTGGA +
Preference number: 6 (lower is better)
Translates to: DPRPLCSGSQSI*VNTLANSEMPG
Trigger: TCCAGGCATCTCTGAGTTAGCTAAAGTATTAACCCAGATGGACTGTGATCCAGAGCAAAGAGGCCTTGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp CCTTGCATATCTCTCTGTAATTCCTCTTGCTTGGACTaGTACTTCTGTAACTCCACCGTGCCGTCTCCAATC +
Preference number: 6 (lower is better)
Translates to: PCISLCNSSCLD*YFCNSTVPSPI
Trigger: GATTGGAGACGGCACGGTGGAGTTACAGAAGTACCAGTCCAAGCAAGAGGAATTACAGAGAGATATGCAAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GGAGCTTGTCTGAGAGCTTCTCAAACTGCTCTACTTTaGCCTTTAGCTCCACCATCTTGGCTAGCTTTTCCT +
Preference number: 6 (lower is better)
Translates to: GACLRASQTALL*PLAPPSWLAFP
Trigger: AGGAAAAGCTAGCCAAGATGGTGGAGCTAAAGGCCAAAGTAGAGCAGTTTGAGAAGCTCTCAGACAAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TTGGTTTCTAAGAAAGAACACTTCTCGTCCACCTGTTaGCTCAGTTCGCTGTGCTCTTCAGCTAACGTCTCC +
Preference number: 6 (lower is better)
Translates to: LVSKKEHFSSTC*LSSLCSSANVS
Trigger: GGAGACGTTAGCTGAAGAGCACAGCGAACTGAGCCAACAGGTGGACGAGAAGTGTTCTTTCTTAGAAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GCCAATAGCCTGCAATGGGACTGTGCAAATCCTTCTTaGGAACTACCTTGCTCAGAAGAAAGTCAGCCAGTT +
Preference number: 6 (lower is better)
Translates to: ANSLQWDCANPS*ELPCSEESQPV
Trigger: AACTGGCTGACTTTCTTCTGAGCAAGGTAGTTCCCAAGAAGGATTTGCACAGTCCCATTGCAGGCTATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp GAAAGTGATGAGATCTCAGAGCAGCATCTCTGCTTCTaGAACGACCCGAAAAGACCGATTTCATCGGATGTC +
Preference number: 6 (lower is better)
Translates to: ESDEISEQHLCF*NDPKRPISSDV
Trigger: GACATCCGATGAAATCGGTCTTTTCGGGTCGTTCCAGAAGCAGAGATGCTGCTCTGAGATCTCATCACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CCA 72 bp TCTGGTGGAAGCACCTTGAACAGAGTGATAGAATTCTaGCTGCACCCGGCTGTTTTTCTTGATCCTTCGCTT +
Preference number: 6 (lower is better)
Translates to: SGGSTLNRVIEF*LHPAVFLDPSL
Trigger: AAGCGAAGGATCAAGAAAAACAGCCGGGTGCAGCCAGAATTCTATCACTCTGTTCAAGGTGCTTCCACCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183034.5
CDS CCA 72 bp CTTTGCCGCACCGGCTCGGTGTCATCTACAACTTTTTaGCAAGGCTTTCTTCTGAAATACTTTCTTCCGGGA +
Preference number: 6 (lower is better)
Translates to: LCRTGSVSSTTF*QGFLLKYFLPG
Trigger: TCCCGGAAGAAAGTATTTCAGAAGAAAGCCTTGCCAAAAAGTTGTAGATGACACCGAGCCGGTGCGGCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS CAA 72 bp GCTCCTCCTCCTAACTCAGCTTCAGAACGGACAATGTaGTCAGAAGATGGGCTGATTTCTGGCGATACATTC +
Preference number: 6 (lower is better)
Translates to: APPPNSASERTM*SEDGLISGDTF
Trigger: GAATGTATCGCCAGAAATCAGCCCATCTTCTGACAACATTGTCCGTTCTGAAGCTGAGTTAGGAGGAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 72 bp TTTGCACATTCTTCGCTTCACCTTCAAGAGTCATGGTaGTTGTCATGGTTGTTGTGTGCGGAGCCCCTCTGT +
Preference number: 6 (lower is better)
Translates to: FAHSSLHLQESW*LSWLLCAEPLC
Trigger: ACAGAGGGGCTCCGCACACAACAACCATGACAACAACCATGACTCTTGAAGGTGAAGCGAAGAATGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 72 bp ATCTTCTACGAACCCAAGCATATGATGTTCTCTTTCTaGGGGCTTCAGAGACAAGGCGCGTTCTCTGTGTGG +
Preference number: 6 (lower is better)
Translates to: IFYEPKHMMFSF*GLQRQGAFSVW
Trigger: CCACACAGAGAACGCGCCTTGTCTCTGAAGCCCCAAGAAAGAGAACATCATATGCTTGGGTTCGTAGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 72 bp TGGAGCTTGTCTGAGAGCTTCTCAAACTGCTCTACTTaGGCCTTTAGCTCCACCATCTTGGCTAGCTTTTCC +
Preference number: 6 (lower is better)
Translates to: WSLSESFSNCST*AFSSTILASFS
Trigger: GGAAAAGCTAGCCAAGATGGTGGAGCTAAAGGCCAAAGTAGAGCAGTTTGAGAAGCTCTCAGACAAGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp GCTTCTTTATCTACCTCGCAGACGCTGAGCAGGCTATaGGCTGTGTTGTTCAGTAGTTCCAGCATACCAAAG +
Preference number: 6 (lower is better)
Translates to: ASLSTSQTLSRL*AVLFSSSSIPK
Trigger: CTTTGGTATGCTGGAACTACTGAACAACACAGCCAATAGCCTGCTCAGCGTCTGCGAGGTAGATAAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp GCATGTTCTAGGGTCTTCGCTACATCGGCACTCAACTaGGTGATGTCTTTGTACCTGGCTTTAATGGCTTCC +
Preference number: 6 (lower is better)
Translates to: ACSRVFATSALN*VMSLYLALMAS
Trigger: GGAAGCCATTAAAGCCAGGTACAAAGACATCACCAAGTTGAGTGCCGATGTAGCGAAGACCCTAGAACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp TCCCTAAGTTCACTCAGCATGTTGTCCAGCTTCAGGTaGTCATCTGCCAGGGAGGTTTTCTCCTTCAGAGAA +
Preference number: 6 (lower is better)
Translates to: SLSSLSMLSSFR*SSAREVFSFRE
Trigger: TTCTCTGAAGGAGAAAACCTCCCTGGCAGATGACAACCTGAAGCTGGACAACATGCTGAGTGAACTTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp CGGGAAAGTCGGGGCATTCTGCTGCTTTACAGGGAGTaGACATTTTGCTGTTTGCCAACCATGGTTTACCAT +
Preference number: 6 (lower is better)
Translates to: RESRGILLLYRE*TFCCLPTMVYH
Trigger: ATGGTAAACCATGGTTGGCAAACAGCAAAATGTCAACTCCCTGTAAAGCAGCAGAATGCCCCGACTTTCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp TTCTCCATCTTCTTCCGAAACTCATCTGCCGAGCGTTaGAACTTATCCGACTCTTCCTGGAGCAGGATCATC +
Preference number: 6 (lower is better)
Translates to: FSIFFRNSSAER*NLSDSSWSRII
Trigger: GATGATCCTGCTCCAGGAAGAGTCGGATAAGTTCAAACGCTCGGCAGATGAGTTTCGGAAGAAGATGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp TGCTTGATGCCTGAGAGATCGGTTTCAGTGACGACCTaGGACTCCATTAGCTTCTCCATCTTCTTCCGAAAC +
Preference number: 6 (lower is better)
Translates to: CLMPERSVSVTT*DSISFSIFFRN
Trigger: GTTTCGGAAGAAGATGGAGAAGCTAATGGAGTCCAAGGTCGTCACTGAAACCGATCTCTCAGGCATCAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp ACCAGTCGCAGCTGCTGGGAGTCTCCAAACCTGTATTaGTTATCACCGATCTGTTCAACTTGGAATCGCTTG +
Preference number: 6 (lower is better)
Translates to: TSRSCWESPNLY*LSPICSTWNRL
Trigger: CAAGCGATTCCAAGTTGAACAGATCGGTGATAACAAATACAGGTTTGGAGACTCCCAGCAGCTGCGACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182507.4
ENSMUST00000183100.8
CDS CAA 90 bp CCTGATATCATGAGCTTGGTCTGTTCCGTGGTCAGCATGCGTCCTTaGCTGTACACCGAAGAACATTCGTTCCTTAAGGCCATAATCTCA +
Preference number: 6 (lower is better)
Translates to: PDIMSLVCSVVSMRP*LYTEEHSFLKAIIS
Trigger: TGAGATTATGGCCTTAAGGAACGAATGTTCTTCGGTGTACAGCAAAGGACGCATGCTGACCACGGAACAGACCAAGCTCATGATATCAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CAA 90 bp AGTCCTCTGTGCCAAGAGAAGGCTTCACAACGGGAACCTGCTTGGTaGTCTCTTTTATCCATGTTTTCAGTGACTGAGCGAGGGTTTGAA +
Preference number: 6 (lower is better)
Translates to: SPLCQEKASQREPAW*SLLSMFSVTERGFE
Trigger: TTCAAACCCTCGCTCAGTCACTGAAAACATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTGTGAAGCCTTCTCTTGGCACAGAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TTATCACCGATCTGTTCAACTTGGAATCGCTTGGCACACTTACACTaGGCTACCTGCCTTGTGACCTCGTCCTCAATTTTGTCAGCATCC +
Preference number: 6 (lower is better)
Translates to: LSPICSTWNRLAHLH*ATCLVTSSSILSAS
Trigger: GGATGCTGACAAAATTGAGGACGAGGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTGAACAGATCGGTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CAA 90 bp TTTATTTTCTTGAGATCGTTTGCTTCCTGCCTGACCTCTTCAGCTTaGTCTGTTGTTTGGTTCAGCTGCCTGCCAAGGTCTCTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: FIFLRSFASCLTSSA*SVVWFSCLPRSLSC
Trigger: GCAGCTCAGAGACCTTGGCAGGCAGCTGAACCAAACAACAGACAAAGCTGAAGAGGTCAGGCAGGAAGCAAACGATCTCAAGAAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp CCAAACCTGTATTTGTTATCACCGATCTGTTCAACTTGGAATCGCTaGGCACACTTACACTTGGCTACCTGCCTTGTGACCTCGTCCTCA +
Preference number: 6 (lower is better)
Translates to: PNLYLLSPICSTWNR*AHLHLATCLVTSSS
Trigger: TGAGGACGAGGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTGAACAGATCGGTGATAACAAATACAGGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182507.4
ENSMUST00000183100.8
CDS CAA 90 bp CTGGGAGTCTCCAAACCTGTATTTGTTATCACCGATCTGTTCAACTaGGAATCGCTTGGCACACTTACACTTGGCTACCTGCCTTGTGAC +
Preference number: 6 (lower is better)
Translates to: LGVSKPVFVITDLFN*ESLGTLTLGYLPCD
Trigger: GTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTGAACAGATCGGTGATAACAAATACAGGTTTGGAGACTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182507.4
ENSMUST00000183100.8
CDS CAA 90 bp TGGTCTGCCTTTTCTTTGTGCCAGTCAAAGTCAAGGTCCCGTTCTTaGTGTGTCTTGAACATCTCATCGCTGATGGCTTTTGCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: WSAFSLCQSKSRSRS*CVLNISSLMAFAFC
Trigger: GCAGAAAGCAAAAGCCATCAGCGATGAGATGTTCAAGACACACAAAGAACGGGACCTTGACTTTGACTGGCACAAAGAAAAGGCAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CAA 90 bp AGAAACGTCTGGAGCTTGTCTGAGAGCTTCTCAAACTGCTCTACTTaGGCCTTTAGCTCCACCATCTTGGCTAGCTTTTCCTTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: RNVWSLSESFSNCST*AFSSTILASFSLCF
Trigger: GAAACACAAGGAAAAGCTAGCCAAGATGGTGGAGCTAAAGGCCAAAGTAGAGCAGTTTGAGAAGCTCTCAGACAAGCTCCAGACGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp AGCTGCAGAGCATGTTCTAGGGTCTTCGCTACATCGGCACTCAACTaGGTGATGTCTTTGTACCTGGCTTTAATGGCTTCCAACTTATCT +
Preference number: 6 (lower is better)
Translates to: SCRACSRVFATSALN*VMSLYLALMASNLS
Trigger: AGATAAGTTGGAAGCCATTAAAGCCAGGTACAAAGACATCACCAAGTTGAGTGCCGATGTAGCGAAGACCCTAGAACATGCTCTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp GCGGTGAGAATTCACTTCGTTCGCAAAGACCTTGTGCTCATCAATTaGAAACAAGATGGTGTCCAAGATAAGACTTGGCCGAGAAGCCAC +
Preference number: 6 (lower is better)
Translates to: AVRIHFVRKDLVLIN*KQDGVQDKTWPRSH
Trigger: GTGGCTTCTCGGCCAAGTCTTATCTTGGACACCATCTTGTTTCAAATTGATGAGCACAAGGTCTTTGCGAACGAAGTGAATTCTCACCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp AAGAACCTGTATTTGTTATCACCGATCTGTTCAACTTGGAATCGCTaGGCACACTTACACTTGGCTACCTGCCTTGTGACCTCGTCCTCA +
Preference number: 6 (lower is better)
Translates to: KNLYLLSPICSTWNR*AHLHLATCLVTSSS
Trigger: TGAGGACGAGGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTGAACAGATCGGTGATAACAAATACAGGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp AGAAACCTGTATTTGTTATCACCGATCTGTTCAACTTGGAATCGCTaGGCACACTTACACTTGGCTACCTGCCTTGTGACCTCGTCCTCA +
Preference number: 6 (lower is better)
Translates to: RNLYLLSPICSTWNR*AHLHLATCLVTSSS
Trigger: TGAGGACGAGGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTGAACAGATCGGTGATAACAAATACAGGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115104.10
CDS CAA 90 bp TTGGGCTTGGGCAAACCTGGGCTTCGAATGACGTCACTGTTTAGTTaGAGGGCATCAAAGATCATCTTTTCATCTAGCTTGCTCGTTTCC +
Preference number: 6 (lower is better)
Translates to: LGLGKPGLRMTSLFS*RASKIIFSSSLLVS
Trigger: GGAAACGAGCAAGCTAGATGAAAAGATGATCTTTGATGCCCTCAAACTAAACAGTGACGTCATTCGAAGCCCAGGTTTGCCCAAGCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS TCA 72 bp GGTTTTCTTCAGCTTCTCTACAGCAACCTGCTGACTTaGTATCTGTCCTTGCAAAGCCTTGGTCTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: GFLQLLYSNLLT*YLSLQSLGLFQ
Trigger: CTGGAAGAGACCAAGGCTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCTGTAGAGAAGCTGAAGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp TCTGCGGTTTTCTTCAGCTTCTCTACAGCAACCTGCTaGCTTGATATCTGTCCTTGCAAAGCCTTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: SAVFFSFSTATC*LDICPCKALVS
Trigger: AGAGACCAAGGCTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCTGTAGAGAAGCTGAAGAAAACCGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp GTCTTCACCTTTTCGTTCATGGCATTTATGCTGCTTTaGCGACCCGTAATATCCTGCTCCAGCATGGTGTCT +
Preference number: 6 (lower is better)
Translates to: VFTFSFMAFMLL*RPVISCSSMVS
Trigger: AGACACCATGCTGGAGCAGGATATTACGGGTCGTCAAAGCAGCATAAATGCCATGAACGAAAAGGTGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp TGTTCTAAGAATTTAGCAGTTGATTCCTGCATATGCTaGGACAGCTCCGGAACATCCTTTCCTGGCATGGCC +
Preference number: 6 (lower is better)
Translates to: CSKNLAVDSCIC*DSSGTSFPGMA
Trigger: GGCCATGCCAGGAAAGGATGTTCCGGAGCTGTCTCAGCATATGCAGGAATCAACTGCTAAATTCTTAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp CCTGCAGCTGAGCAGAGGTCTGGTCTTGCTCAAGTCTaGTGTCACCCAGAGACATTAATTTCTTCTGTGTTT +
Preference number: 6 (lower is better)
Translates to: PAAEQRSGLAQV*CHPETLISSVF
Trigger: AAACACAGAAGAAATTAATGTCTCTGGGTGACATCAGACTTGAGCAAGACCAGACCTCTGCTCAGCTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 72 bp AGTGCAGGGCCTCCTCCAACTTTGTTTTCTTCTCGTTaGGTTTGCTCTTCACGGATTCCCACTTCTCTTTCA +
Preference number: 6 (lower is better)
Translates to: SAGPPPTLFSSR*VCSSRIPTSLS
Trigger: TGAAAGAGAAGTGGGAATCCGTGAAGAGCAAACTCAACGAGAAGAAAACAAAGTTGGAGGAGGCCCTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp GTTCCAGTCTTGTCCAACTCTATTATCTGCTCGCGGTaGGAATTCACTTCGTTCGCAAAGACCTTGTGCTCA +
Preference number: 6 (lower is better)
Translates to: VPVLSNSIICSR*EFTSFAKTLCS
Trigger: TGAGCACAAGGTCTTTGCGAACGAAGTGAATTCTCACCGCGAGCAGATAATAGAGTTGGACAAGACTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp GGGAAAGTCGGGGCATTCTGCTGCTTTACAGGGAGTTaGCATTTTGCTGTTTGCCAACCATGGTTTACCATA +
Preference number: 6 (lower is better)
Translates to: GKVGAFCCFTGS*HFAVCQPWFTI
Trigger: TATGGTAAACCATGGTTGGCAAACAGCAAAATGTCAACTCCCTGTAAAGCAGCAGAATGCCCCGACTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp AAGCTAATGCAGGAGTTGATCAGCGTGGGACCACAATaGACGGACAGGAGATTCTCATTGGAATCCAGACTA +
Preference number: 6 (lower is better)
Translates to: KLMQELISVGPQ*TDRRFSLESRL
Trigger: TAGTCTGGATTCCAATGAGAATCTCCTGTCCGTTCATTGTGGTCCCACGCTGATCAACTCCTGCATTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
CDS TCA 72 bp AAGTCAGCCAGTTCTGTTAGTGTAGTTAGGCCTTCCTaGTACTTTTGCACCAAGGCTTTGTCTAGCGTTCCC +
Preference number: 6 (lower is better)
Translates to: KSASSVSVVRPS*YFCTKALSSVP
Trigger: GGGAACGCTAGACAAAGCCTTGGTGCAAAAGTATCAGGAAGGCCTAACTACACTAACAGAACTGGCTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp ATCACTGTCCTGTTCCAGGACACTGTGACAGCTTCTTaGGAGGTTTCCCATAAGTGCACTGTTTTTGAGGGA +
Preference number: 6 (lower is better)
Translates to: ITVLFQDTVTAS*EVSHKCTVFEG
Trigger: TCCCTCAAAAACAGTGCACTTATGGGAAACCTCTCAAGAAGCTGTCACAGTGTCCTGGAACAGGACAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS GCA 72 bp GTTTGTGAATGCTGCTGGACCTGTCACAGCTGTACTTaGGCTGGATGGCATCTTTCAGATTCCTTAGGTAAT +
Preference number: 6 (lower is better)
Translates to: VCECCWTCHSCT*AGWHLSDSLGN
Trigger: ATTACCTAAGGAATCTGAAAGATGCCATCCAGCGCAAGTACAGCTGTGACAGGTCCAGCAGCATTCACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 72 bp GTCTTGAACATCTCATCGCTGATGGCTTTTGCTTTCTaGAACTCGTCTTCCAATGCATGGAACACCTCTCTC +
Preference number: 6 (lower is better)
Translates to: VLNISSLMAFAF*NSSSNAWNTSL
Trigger: GAGAGAGGTGTTCCATGCATTGGAAGACGAGTTGCAGAAAGCAAAAGCCATCAGCGATGAGATGTTCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 72 bp CTTCTTCCACACTTCAGTGTTATTCTGCCAGCTTCCTaGGGTCTCACTGGTAAAAGCCACATCCTGGTATTT +
Preference number: 6 (lower is better)
Translates to: LLPHFSVILPAS*GLTGKSHILVF
Trigger: AAATACCAGGATGTGGCTTTTACCAGTGAGACCGCAGGAAGCTGGCAGAATAACACTGAAGTGTGGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp TTTTCTTCTGCCATCTTGGGAACAGCACATGATGTTTaGCCCAAAGCTTCGGCCTGGTCTTTTTCAGTTGCA +
Preference number: 6 (lower is better)
Translates to: FSSAILGTAHDV*PKASAWSFSVA
Trigger: TGCAACTGAAAAAGACCAGGCCGAAGCTTTGGGGCAAACATCATGTGCTGTTCCCAAGATGGCAGAAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp AGAGTCCCTCTGCTCTTCTTTCTTGGCGTCAAGCCATaGTTGGAAATCCTTAGACATTTGCTGAAACTGGTG +
Preference number: 6 (lower is better)
Translates to: RVPLLFFLGVKP*LEILRHLLKLV
Trigger: CACCAGTTTCAGCAAATGTCTAAGGATTTCCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGAGGGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp CGGGGCATTCTGCTGCTTTACAGGGAGTTGACATTTTaGTGTTTGCCAACCATGGTTTACCATAATTGCGTG +
Preference number: 6 (lower is better)
Translates to: RGILLLYRELTF*CLPTMVYHNCV
Trigger: CACGCAATTATGGTAAACCATGGTTGGCAAACAGCAAAATGTCAACTCCCTGTAAAGCAGCAGAATGCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp CAAACTGCTCTACTTTGGCCTTTAGCTCCACCATCTTaGCTAGCTTTTCCTTGTGTTTCTGACTTGCTTCGG +
Preference number: 6 (lower is better)
Translates to: QTALLWPLAPPS*LAFPCVSDLLR
Trigger: CCGAAGCAAGTCAGAAACACAAGGAAAAGCTAGCCAAGATGGTGGAGCTAAAGGCCAAAGTAGAGCAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp CTGTGCCAAGAGAAGGCTTCACAACGGGAACCTGCTTaGTTGTCTCTTTTATCCATGTTTTCAGTGACTGAG +
Preference number: 6 (lower is better)
Translates to: LCQEKASQREPA*LSLLSMFSVTE
Trigger: CTCAGTCACTGAAAACATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTGTGAAGCCTTCTCTTGGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp AGCCACTGTTTTAACTGGGCCTCTGTGGTCTGGAACTaGGTTAGATTATTGGAGGACTCTTCCAGCTTTTGT +
Preference number: 6 (lower is better)
Translates to: SHCFNWASVVWN*VRLLEDSSSFC
Trigger: ACAAAAGCTGGAAGAGTCCTCCAATAATCTAACCCAGTTCCAGACCACAGAGGCCCAGTTAAAACAGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TTGGCTGTGTTGTTCAGTAGTTCCAGCATACCAAAGTaGTGGTCCATTTCCTTCTGCAGGGACTTTAACTCG +
Preference number: 6 (lower is better)
Translates to: LAVLFSSSSIPK*WSISFCRDFNS
Trigger: CGAGTTAAAGTCCCTGCAGAAGGAAATGGACCACCACTTTGGTATGCTGGAACTACTGAACAACACAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TCTTCTTTCTGGAATACCTTAAACACATCAAGCTGCTaGTTGATTGTCTCGGTTTCTGTACCTACGGGGCCC +
Preference number: 6 (lower is better)
Translates to: SSFWNTLNTSSC*LIVSVSVPTGP
Trigger: GGGCCCCGTAGGTACAGAAACCGAGACAATCAACCAGCAGCTTGATGTGTTTAAGGTATTCCAGAAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp AGGTTTTCTCCTTCAGAGAACGTCCAGTTCGGTTGGTaGTATCGTAGACAGAATGTTTGCCTCCGAGTGATT +
Preference number: 6 (lower is better)
Translates to: RFSPSENVQFGW*YRRQNVCLRVI
Trigger: AATCACTCGGAGGCAAACATTCTGTCTACGATACCACCAACCGAACTGGACGTTCTCTGAAGGAGAAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp TGTTCTGCAATGAGGGTTTTCACCTCTTCGATCTCCTaGGGGATAACTTCCTTATCTTTCTCGGTCAGTGTG +
Preference number: 6 (lower is better)
Translates to: CSAMRVFTSSIS*GITSLSFSVSV
Trigger: CACACTGACCGAGAAAGATAAGGAAGTTATCCCCCAGGAGATCGAAGAGGTGAAAACCCTCATTGCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GTCAGCATCCGTGATGGGTTTGTACGCATCTTTGTTTaGATGCAGAGCGGCCACGAATTCATAGTAGTCAAT +
Preference number: 6 (lower is better)
Translates to: VSIRDGFVRIFV*MQSGHEFIVVN
Trigger: ATTGACTACTATGAATTCGTGGCCGCTCTGCATCCAAACAAAGATGCGTACAAACCCATCACGGATGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CCA 72 bp TGGTCTTGGGTTGTGCTCTTCTTTTGGATTTCACACTaGAGCCGAAGCAACTGGTGCTCATGTTCCTTTATC +
Preference number: 6 (lower is better)
Translates to: WSWVVLFFWISH*SRSNWCSCSFI
Trigger: GATAAAGGAACATGAGCACCAGTTGCTTCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CCA 72 bp ATGAATGTCTTCAGCAGAGGACAGGCTTCTAATCTGTaGCTGTTCTCCGCTAACAATGCCTGGCTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: MNVFSRGQASNL*LFSANNAWLFF
Trigger: GAAGAAAAGCCAGGCATTGTTAGCGGAGAACAGCCACAGATTAGAAGCCTGTCCTCTGCTGAAGACATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CAA 72 bp CGGTTTTCTTCAGCTTCTCTACAGCAACCTGCTGACTaGATATCTGTCCTTGCAAAGCCTTGGTCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: RFSSASLQQPAD*ISVLAKPWSLP
Trigger: TGGAAGAGACCAAGGCTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCTGTAGAGAAGCTGAAGAAAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp TGTCTTCACCTTTTCGTTCATGGCATTTATGCTGCTTaGACGACCCGTAATATCCTGCTCCAGCATGGTGTC +
Preference number: 6 (lower is better)
Translates to: CLHLFVHGIYAA*TTRNILLQHGV
Trigger: GACACCATGCTGGAGCAGGATATTACGGGTCGTCAAAGCAGCATAAATGCCATGAACGAAAAGGTGAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp TGCCAAGAGAAGGCTTCACAACGGGAACCTGCTTGGTaGTCTCTTTTATCCATGTTTTCAGTGACTGAGCGA +
Preference number: 6 (lower is better)
Translates to: CQEKASQREPAW*SLLSMFSVTER
Trigger: TCGCTCAGTCACTGAAAACATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTGTGAAGCCTTCTCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp AGGGCCTCCTCCAACTTTGTTTTCTTCTCGTTGAGTTaGCTCTTCACGGATTCCCACTTCTCTTTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: RASSNFVFFSLS*LFTDSHFSFRL
Trigger: CAACCTGAAAGAGAAGTGGGAATCCGTGAAGAGCAAACTCAACGAGAAGAAAACAAAGTTGGAGGAGGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp AAGTGCAGGGCCTCCTCCAACTTTGTTTTCTTCTCGTaGAGTTTGCTCTTCACGGATTCCCACTTCTCTTTC +
Preference number: 6 (lower is better)
Translates to: KCRASSNFVFFS*SLLFTDSHFSF
Trigger: GAAAGAGAAGTGGGAATCCGTGAAGAGCAAACTCAACGAGAAGAAAACAAAGTTGGAGGAGGCCCTGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp ATCTGTTCAACTTGGAATCGCTTGGCACACTTACACTaGGCTACCTGCCTTGTGACCTCGTCCTCAATTTTG +
Preference number: 6 (lower is better)
Translates to: ICSTWNRLAHLH*ATCLVTSSSIL
Trigger: CAAAATTGAGGACGAGGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTGAACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CAA 72 bp TCATTATTCTGCCTAGTGAGTTCATCCACCTTCTGCTaGAGCGTTTCTGCGCACTCATTGCTTTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SLFCLVSSSTFC*SVSAHSLLFSS
Trigger: GCTGGAGAAAAGCAATGAGTGCGCAGAAACGCTCAAGCAGAAGGTGGATGAACTCACTAGGCAGAATAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp ATTTCCCAGGAAGAACCTGTATTTGTTATCACCGATCTGTTCAACTaGGAATCGCTTGGCACACTTACACTTGGCTACCTGCCTTGTGAC +
Preference number: 6 (lower is better)
Translates to: ISQEEPVFVITDLFN*ESLGTLTLGYLPCD
Trigger: GTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTGAACAGATCGGTGATAACAAATACAGGTTCTTCCTGGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp TCAGAGTCTGTAATGAATTTGGCTCTACCCCTAAACTaGAGTTTGGAGCTACAACTGAAGGGAACCCAGGTG +
Preference number: 6 (lower is better)
Translates to: SESVMNLALPLN*SLELQLKGTQV
Trigger: CACCTGGGTTCCCTTCAGTTGTAGCTCCAAACTTCAGTTTAGGGGTAGAGCCAAATTCATTACAGACTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 72 bp TTCCCAGTAGGACTGATGACCTTCCATTTAGCTCGATaGGAGTTGTTTGCCAAGACACACTCATCGTCTTTG +
Preference number: 6 (lower is better)
Translates to: FPVGLMTFHLAR*ELFAKTHSSSL
Trigger: CAAAGACGATGAGTGTGTCTTGGCAAACAACTCTCATCGAGCTAAATGGAAGGTCATCAGTCCTACTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 72 bp TACAACTCAGGTTTCTCAATACCTACAGGAAAGCCCTaGGGGCAACATACTTTGTTCTCCACACCTAAGCTC +
Preference number: 6 (lower is better)
Translates to: YNSGFSIPTGKP*GQHTLFSTPKL
Trigger: GAGCTTAGGTGTGGAGAACAAAGTATGTTGCCCTCAGGGCTTTCCTGTAGGTATTGAGAAACCTGAGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp AAGATACTTCTCCCATCTTCTACGAACCCAAGCATATaGTGTTCTCTTTCTTGGGGCTTCAGAGACAAGGCG +
Preference number: 6 (lower is better)
Translates to: KILLPSSTNPSI*CSLSWGFRDKA
Trigger: CGCCTTGTCTCTGAAGCCCCAAGAAAGAGAACATCATATGCTTGGGTTCGTAGAAGATGGGAGAAGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp ATGAGCAGGTTCTTGATGAGCACGACATCTTGTTTCTaGCTGAAATACTTCAGGTGGGTTCCAGTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: MSRFLMSTTSCF*LKYFRWVPVLS
Trigger: GGACAAGACTGGAACCCACCTGAAGTATTTCAGTCAGAAACAAGATGTCGTGCTCATCAAGAACCTGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp AGCTCCATGTTGGTCCTTCCTTTAGCTAGAGTAGGCTaGGTAGCAGTAATTGAAGAGTTTGATTCCGAACGC +
Preference number: 6 (lower is better)
Translates to: SSMLVLPLARVG*VAVIEEFDSER
Trigger: GCGTTCGGAATCAAACTCTTCAATTACTGCTACTCAGCCTACTCTAGCTAAAGGAAGGACCAACATGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000183034.5
CDS TCA 72 bp GTCTGGGGGCACATTATATCCCTGACATATGACTTTTaGTCTTTGAGTCTGGTGGCGATGAGGACATCAATG +
Preference number: 6 (lower is better)
Translates to: VWGHIISLTYDF*SLSLVAMRTSM
Trigger: CATTGATGTCCTCATCGCCACCAGACTCAAAGATCAAAAGTCATATGTCAGGGATATAATGTGCCCCCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp TCTCTTAGTCTGGGGGCACATTATATCCCTGACATATaGCTTTTGATCTTTGAGTCTGGTGGCGATGAGGAC +
Preference number: 6 (lower is better)
Translates to: SLSLGAHYIPDI*LLIFESGGDED
Trigger: GTCCTCATCGCCACCAGACTCAAAGATCAAAAGTCATATGTCAGGGATATAATGTGCCCCCAGACTAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp CTCCGTCTCTGGGCAATATGGAGGGCTATCTTCTTCTaGAATTATCTTGTCTGGGATGCTAACTTGGACTTC +
Preference number: 6 (lower is better)
Translates to: LRLWAIWRAIFF*NYLVWDANLDF
Trigger: GAAGTCCAAGTTAGCATCCCAGACAAGATAATTTCAGAAGAAGATAGCCCTCCATATTGCCCAGAGACGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS GCA 72 bp ACGAGTCACTTTAGAAGCTGGGGTGTCAAATATTTCTaGAAGAGTCTCAAGCAGGACAGGACTTTCCGTAAG +
Preference number: 6 (lower is better)
Translates to: TSHFRSWGVKYF*KSLKQDRTFRK
Trigger: CTTACGGAAAGTCCTGTCCTGCTTGAGACTCTTGCAGAAATATTTGACACCCCAGCTTCTAAAGTGACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp GGTAAGCCATGGCTGGATATCTCTTTCAGGAGGCTGTaGAAAGCTTCGAGATCTTTCCTGTGTTCTAAGAAT +
Preference number: 6 (lower is better)
Translates to: GKPWLDISFRRL*KASRSFLCSKN
Trigger: ATTCTTAGAACACAGGAAAGATCTCGAAGCTTTGCACAGCCTCCTGAAAGAGATATCCAGCCATGGCTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp ACATTTTGCTTCAGTTCTGCCTCAAATGACTTGTTCTaGTCCACCTGCAACTTCACAGACTCAGTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: TFCFSSASNDLF*STCNFTDSVSA
Trigger: TGCAGACACTGAGTCTGTGAAGTTGCAGGTGGAGCAGAACAAGTCATTTGAGGCAGAACTGAAGCAAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp ATGGCTTTTGCTTTCTGCAACTCGTCTTCCAATGCATaGAACACCTCTCTCTTCTCATCTACTTCTGATCGC +
Preference number: 6 (lower is better)
Translates to: MAFAFCNSSSNA*NTSLFSSTSDR
Trigger: GCGATCAGAAGTAGATGAGAAGAGAGAGGTGTTCCATGCATTGGAAGACGAGTTGCAGAAAGCAAAAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 72 bp ACTTTGGAAAACAAGGCGGAGGAAATCAAGTTCTGTTaGAAAGCCTGTTGTAAGGTCAGGTGTTCACCTGTG +
Preference number: 6 (lower is better)
Translates to: TLENKAEEIKFC*KACCKVRCSPV
Trigger: CACAGGTGAACACCTGACCTTACAACAGGCTTTCCAACAGAACTTGATTTCCTCCGCCTTGTTTTCCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp ATCAATTTGAAACAAGATGGTGTCCAAGATAAGACTTaGCCGAGAAGCCACGTTCAGAGTTTGCTCAGCCTG +
Preference number: 6 (lower is better)
Translates to: INLKQDGVQDKT*PRSHVQSLLSL
Trigger: CAGGCTGAGCAAACTCTGAACGTGGCTTCTCGGCCAAGTCTTATCTTGGACACCATCTTGTTTCAAATTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp ACCTCCTTCTCCGTTTTCTGGATGATCATGCTCTGCTaGTCACACTTTTGCTTGAACTCGCTTACTAGGTTT +
Preference number: 6 (lower is better)
Translates to: TSFSVFWMIMLC*SHFCLNSLTRF
Trigger: AAACCTAGTAAGCGAGTTCAAGCAAAAGTGTGACCAGCAGAGCATGATCATCCAGAAAACGGAGAAGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp GACTGTACGTCAAAGGCCGTCGTTTCCAGCTGCATTTaGGTATGTGAAAGGTCTGCTAGCACATTCTTAAGA +
Preference number: 6 (lower is better)
Translates to: DCTSKAVVSSCI*VCERSASTFLR
Trigger: TCTTAAGAATGTGCTAGCAGACCTTTCACATACCAAAATGCAGCTGGAAACGACGGCCTTTGACGTACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS CAA 72 bp GTGATCTGGAGCTTTTCATTCCGTTCGTTCACACACTaGGACAGATCATCGTATCTCCCGACAATGTCATCA +
Preference number: 6 (lower is better)
Translates to: VIWSFSFRSFTH*DRSSYLPTMSS
Trigger: TGATGACATTGTCGGGAGATACGATGATCTGTCCAAGTGTGTGAACGAACGGAATGAAAAGCTCCAGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp TATTTGTTATCACCGATCTGTTCAACTTGGAATCGCTaGGCACACTTACACTTGGCTACCTGCCTTGTGACC +
Preference number: 6 (lower is better)
Translates to: YLLSPICSTWNR*AHLHLATCLVT
Trigger: GGTCACAAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTGAACAGATCGGTGATAACAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000182507.4
ENSMUST00000183034.5
ENSMUST00000183100.8
ENSMUST00000185269.7
CDS CAA 72 bp CAGCTTCTTGAGAGGTTTCCCATAAGTGCACTGTTTTaGAGGGACTTCTCTGTGACACAGAGAATGGGACTT +
Preference number: 6 (lower is better)
Translates to: QLLERFPISALF*RDFSVTQRMGL
Trigger: AAGTCCCATTCTCTGTGTCACAGAGAAGTCCCTCAAAAACAGTGCACTTATGGGAAACCTCTCAAGAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS CAA 90 bp TTTTCTTTGTGCCAGTCAAAGTCAAGGTCCCGTTCTTTGTGTGTCTaGAACATCTCATCGCTGATGGCTTTTGCTTTCTGCAACTCGTCT +
Preference number: 6 (lower is better)
Translates to: FSLCQSKSRSRSLCV*NISSLMAFAFCNSS
Trigger: AGACGAGTTGCAGAAAGCAAAAGCCATCAGCGATGAGATGTTCAAGACACACAAAGAACGGGACCTTGACTTTGACTGGCACAAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CAA 90 bp CACGGGTCAATAAGATCTTTGCAAGTGTCTTGCCTTTCTAGGACTTaGGAAAACAAGGCGGAGGAAATCAAGTTCTGTTGGAAAGCCTGT +
Preference number: 6 (lower is better)
Translates to: HGSIRSLQVSCLSRT*ENKAEEIKFCWKAC
Trigger: ACAGGCTTTCCAACAGAACTTGATTTCCTCCGCCTTGTTTTCCAAAGTCCTAGAAAGGCAAGACACTTGCAAAGATCTTATTGACCCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CAA 90 bp CATTGGAACATTTTTCCTTCGAGCTACTGTCAGAAGACCTTTCTTTaGATCCAGATGTACTTTCTGAATGCTCTGGGGGCTCGCTGCAAA +
Preference number: 6 (lower is better)
Translates to: HWNIFPSSYCQKTFL*IQMYFLNALGARCK
Trigger: TTTGCAGCGAGCCCCCAGAGCATTCAGAAAGTACATCTGGATCAAAAGAAAGGTCTTCTGACAGTAGCTCGAAGGAAAAATGTTCCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS CAA 90 bp GAGATGAAGGACTGTACGTCAAAGGCCGTCGTTTCCAGCTGCATTTaGGTATGTGAAAGGTCTGCTAGCACATTCTTAAGAAACTTCACA +
Preference number: 6 (lower is better)
Translates to: EMKDCTSKAVVSSCI*VCERSASTFLRNFT
Trigger: TGTGAAGTTTCTTAAGAATGTGCTAGCAGACCTTTCACATACCAAAATGCAGCTGGAAACGACGGCCTTTGACGTACAGTCCTTCATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS CAA 90 bp TCCAACAAGGCACTGCTCACTTCATTGAGAGAATCCACTAAGGCTTaGTTGCTCCTGACTTCGTTTTTCAGTTCTTTCTGTCTCTCTTGC +
Preference number: 6 (lower is better)
Translates to: SNKALLTSLRESTKA*LLLTSFFSSFCLSC
Trigger: GCAAGAGAGACAGAAAGAACTGAAAAACGAAGTCAGGAGCAACAAAGCCTTAGTGGATTCTCTCAATGAAGTGAGCAGTGCCTTGTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp AGTCGGGGCATTCTGCTGCTTTACAGGGAGTTGACATTTTGCTGTTaGCCAACCATGGTTTACCATAATTGCGTGTTAAAGGATGGAGAA +
Preference number: 6 (lower is better)
Translates to: SRGILLLYRELTFCC*PTMVYHNCVLKDGE
Trigger: TTCTCCATCCTTTAACACGCAATTATGGTAAACCATGGTTGGCAAACAGCAAAATGTCAACTCCCTGTAAAGCAGCAGAATGCCCCGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp CCAGCCGAAGGGTCTCCCACTTCCTGGAGATTCATATaGACTTTGTCTAAACTGCTTTTCAAGATACTTCTC +
Preference number: 6 (lower is better)
Translates to: PAEGSPTSWRFI*TLSKLLFKILL
Trigger: GAGAAGTATCTTGAAAAGCAGTTTAGACAAAGTTCATATGAATCTCCAGGAAGTGGGAGACCCTTCGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp GGCAACTCAGACAAGATAGCTCTTCTAATTAAGTTCTaGATTGAAATTTTCGTCCCTGTGCCAGCCGAAGGG +
Preference number: 6 (lower is better)
Translates to: GNSDKIALLIKF*IEIFVPVPAEG
Trigger: CCCTTCGGCTGGCACAGGGACGAAAATTTCAATTCAGAACTTAATTAGAAGAGCTATCTTGTCTGAGTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS GCA 72 bp CTGATACTGTTGCTCAATTCTGTTGGCAAAGTCAACTaGTTCTTTGTTTGGTGGGGGAACAGTAAAGCACAC +
Preference number: 6 (lower is better)
Translates to: LILLLNSVGKVN*FFVWWGNSKAH
Trigger: GTGTGCTTTACTGTTCCCCCACCAAACAAAGAAGCAGTTGACTTTGCCAACAGAATTGAGCAACAGTATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 72 bp TCTTTAAGCCGATCCAGCTCTTTCTTCAGTTTCTCCTaGTCCGTGATCCTGAGCATGCTTTCATGTAAATCA +
Preference number: 6 (lower is better)
Translates to: SLSRSSSFFSFS*SVILSMLSCKS
Trigger: TGATTTACATGAAAGCATGCTCAGGATCACGGAGCAGGAGAAACTGAAGAAAGAGCTGGATCGGCTTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 72 bp TTTGTGTGTCTTGAACATCTCATCGCTGATGGCTTTTaGTTTCTGCAACTCGTCTTCCAATGCATGGAACAC +
Preference number: 6 (lower is better)
Translates to: FVCLEHLIADGF*FLQLVFQCMEH
Trigger: GTGTTCCATGCATTGGAAGACGAGTTGCAGAAAGCAAAAGCCATCAGCGATGAGATGTTCAAGACACACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS GCA 72 bp AGTACTGCTCTGAGTATTTCTGACACTCGTCCATTTTaGTCTGCTTCACCTCTATTTCAGACACCAGCATCT +
Preference number: 6 (lower is better)
Translates to: STALSISDTRPF*SASPLFQTPAS
Trigger: AGATGCTGGTGTCTGAAATAGAGGTGAAGCAGAGCAAAATGGACGAGTGTCAGAAATACTCAGAGCAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CCA 72 bp GAAATGAGCTGCTTTGCTCGATTTAGTTCTTTTAGTTaGCGCAGAACTTGTTCATCAATGAGGCCGTGGCTT +
Preference number: 6 (lower is better)
Translates to: EMSCFARFSSFS*RRTCSSMRPWL
Trigger: AAGCCACGGCCTCATTGATGAACAAGTTCTGCGCCAACTAAAAGAACTAAATCGAGCAAAGCAGCTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp TCGTTCAGTTTCTGCTCAATCAAAGCTCTATCCGCTTaGGACAACTCGTCACCGCTCTCTTTTAAAAAGAGT +
Preference number: 6 (lower is better)
Translates to: SFSFCSIKALSA*DNSSPLSFKKS
Trigger: ACTCTTTTTAAAAGAGAGCGGTGACGAGTTGTCCCAAGCGGATAGAGCTTTGATTGAGCAGAAACTGAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CCA 72 bp GATATTTCCCTCTCCCCAAACGGCAAGAGAAAACACTaGCAATCTACATCAAACACACAGATCTGCAGTAAC +
Preference number: 6 (lower is better)
Translates to: DISLSPNGKRKH*QSTSNTQICSN
Trigger: GTTACTGCAGATCTGTGTGTTTGATGTAGATTGCCAGTGTTTTCTCTTGCCGTTTGGGGAGAGGGAAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 72 bp CCACTGCATCATTGCACTGGACTCTTCCTGAGCCTTTaGCAATTTGGAGAGCTTAGTGTTCAGTTCAACTAT +
Preference number: 6 (lower is better)
Translates to: PLHHCTGLFLSL*QFGELSVQFNY
Trigger: ATAGTTGAACTGAACACTAAGCTCTCCAAATTGCAAAAGGCTCAGGAAGAGTCCAGTGCAATGATGCAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp AGTTTGAGGGCATCAAAGATCATCTTTTCATCTAGCTaGCTCGTTTCCCGACCTCTCAGCTCAAATATGCTG +
Preference number: 6 (lower is better)
Translates to: SLRASKIIFSSS*LVSRPLSSNML
Trigger: CAGCATATTTGAGCTGAGAGGTCGGGAAACGAGCAAGCTAGATGAAAAGATGATCTTTGATGCCCTCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CAA 72 bp GGCAAACCTGGGCTTCGAATGACGTCACTGTTTAGTTaGAGGGCATCAAAGATCATCTTTTCATCTAGCTTG +
Preference number: 6 (lower is better)
Translates to: GKPGLRMTSLFS*RASKIIFSSSL
Trigger: CAAGCTAGATGAAAAGATGATCTTTGATGCCCTCAAACTAAACAGTGACGTCATTCGAAGCCCAGGTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS CAA 90 bp TTGAATTTCCTTGACAAGTTATTAGTTTTCTCAAACACCAGAGCTTaGTCCCCTGGTAAGCCATGGCTGGATATCTCTTTCAGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: LNFLDKLLVFSNTRA*SPGKPWLDISFRRL
Trigger: CAGCCTCCTGAAAGAGATATCCAGCCATGGCTTACCAGGGGACAAAGCTCTGGTGTTTGAGAAAACTAATAACTTGTCAAGGAAATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp AACAAGGCACTGCTCACTTCATTGAGAGAATCCACTAAGGCTTTGTaGCTCCTGACTTCGTTTTTCAGTTCTTTCTGTCTCTCTTGCACT +
Preference number: 6 (lower is better)
Translates to: NKALLTSLRESTKAL*LLTSFFSSFCLSCT
Trigger: AGTGCAAGAGAGACAGAAAGAACTGAAAAACGAAGTCAGGAGCAACAAAGCCTTAGTGGATTCTCTCAATGAAGTGAGCAGTGCCTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 90 bp GGCCTCATCAAGAACCACAGCTCGCTTTTTGACATCTTCTTTAATTaGACTGTAGAGGGTGTCGGCTGCCACATACTTTTCTTGGATATA +
Preference number: 6 (lower is better)
Translates to: GLIKNHSSLFDIFFN*TVEGVGCHILFLDI
Trigger: TATATCCAAGAAAAGTATGTGGCAGCCGACACCCTCTACAGTCAAATTAAAGAAGATGTCAAAAAGCGAGCTGTGGTTCTTGATGAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS TCA 72 bp GGGTGTAAGGTTTGTGCAAATCCTGAGTTTAAGCTTTaGGTGATTCCTGATATCATGAGCTTGGTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: GCKVCANPEFKL*VIPDIMSLVCS
Trigger: GGAACAGACCAAGCTCATGATATCAGGAATCACTCAAAGCTTAAACTCAGGATTTGCACAAACCTTACACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 72 bp CACTCTTCATGTTTATGTGAGACTCATGCCAGAGAGTaGGTACACTCTGATACTGTTGCTCAATTCTGTTGG +
Preference number: 6 (lower is better)
Translates to: HSSCLCETHARE*VHSDTVAQFCW
Trigger: CCAACAGAATTGAGCAACAGTATCAGAGTGTACTCACTCTCTGGCATGAGTCTCACATAAACATGAAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 72 bp TTGTTCTCCACACCTAAGCTCTCATCCATTCCTCCATaGGGAAACTCGGGATTTTCCTTCTCTTTCATAACA +
Preference number: 6 (lower is better)
Translates to: LFSTPKLSSIPP*GNSGFSFSFIT
Trigger: TGTTATGAAAGAGAAGGAAAATCCCGAGTTTCCTCATGGAGGAATGGATGAGAGCTTAGGTGTGGAGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp CTTACTTCTGATGAGTTACTAATGGGGGAAATGCCATaGCTGGGCACATTCGAAACTTCATTTGGCAACTCA +
Preference number: 6 (lower is better)
Translates to: LTSDELLMGEMP*LGTFETSFGNS
Trigger: TGAGTTGCCAAATGAAGTTTCGAATGTGCCCAGTCATGGCATTTCCCCCATTAGTAACTCATCAGAAGTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS TCA 72 bp TTCTGTAAACGTTGGTGGCTTTTGCTCAGTTCCTCATaGTGTCTTCTGGGAAGGTCACTAGGAAAAGACTTT +
Preference number: 6 (lower is better)
Translates to: FCKRWWLLLSSS*CLLGRSLGKDF
Trigger: AAAGTCTTTTCCTAGTGACCTTCCCAGAAGACATCATGAGGAACTGAGCAAAAGCCACCAACGTTTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS TCA 72 bp TTCACTTCGTTCGCAAAGACCTTGTGCTCATCAATTTaGAACAAGATGGTGTCCAAGATAAGACTTGGCCGA +
Preference number: 6 (lower is better)
Translates to: FTSFAKTLCSSI*NKMVSKIRLGR
Trigger: TCGGCCAAGTCTTATCTTGGACACCATCTTGTTTCAAATTGATGAGCACAAGGTCTTTGCGAACGAAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp ATTTCTTCTTTCTGGAATACCTTAAACACATCAAGCTaGTGGTTGATTGTCTCGGTTTCTGTACCTACGGGG +
Preference number: 6 (lower is better)
Translates to: ISSFWNTLNTSS*WLIVSVSVPTG
Trigger: CCCCGTAGGTACAGAAACCGAGACAATCAACCAGCAGCTTGATGTGTTTAAGGTATTCCAGAAAGAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp ACATTTTGCTGTTTGCCAACCATGGTTTACCATAATTaGGTGTTAAAGGATGGAGAATCTTGGGTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: TFCCLPTMVYHN*VLKDGESWVCW
Trigger: CCAGCACACCCAAGATTCTCCATCCTTTAACACGCAATTATGGTAAACCATGGTTGGCAAACAGCAAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp TTTTCTTTGTGCCAGTCAAAGTCAAGGTCCCGTTCTTaGTGTGTCTTGAACATCTCATCGCTGATGGCTTTT +
Preference number: 6 (lower is better)
Translates to: FSLCQSKSRSRS*CVLNISSLMAF
Trigger: AAAAGCCATCAGCGATGAGATGTTCAAGACACACAAAGAACGGGACCTTGACTTTGACTGGCACAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CAA 72 bp CTTGACAAGTTATTAGTTTTCTCAAACACCAGAGCTTaGTCCCCTGGTAAGCCATGGCTGGATATCTCTTTC +
Preference number: 6 (lower is better)
Translates to: LDKLLVFSNTRA*SPGKPWLDISF
Trigger: GAAAGAGATATCCAGCCATGGCTTACCAGGGGACAAAGCTCTGGTGTTTGAGAAAACTAATAACTTGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp CACTCAGCAGGTTACATAGTGAGACACCACTGTTGTTaGCTTTGTGAATTTCTGGTGCTTTCAGATTCCACT +
Preference number: 6 (lower is better)
Translates to: HSAGYIVRHHCC*LCEFLVLSDST
Trigger: AGTGGAATCTGAAAGCACCAGAAATTCACAAAGCAAACAACAGTGGTGTCTCACTATGTAACCTGCTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 72 bp GCACTGCTCACTTCATTGAGAGAATCCACTAAGGCTTaGTTGCTCCTGACTTCGTTTTTCAGTTCTTTCTGT +
Preference number: 6 (lower is better)
Translates to: ALLTSLRESTKA*LLLTSFFSSFC
Trigger: ACAGAAAGAACTGAAAAACGAAGTCAGGAGCAACAAAGCCTTAGTGGATTCTCTCAATGAAGTGAGCAGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
ENSMUST00000194192.3
CDS CAA 72 bp GGGCAATATGGAGGGCTATCTTCTTCTGAAATTATCTaGTCTGGGATGCTAACTTGGACTTCTGAGTATCTC +
Preference number: 6 (lower is better)
Translates to: GQYGGLSSSEII*SGMLTWTSEYL
Trigger: GAGATACTCAGAAGTCCAAGTTAGCATCCCAGACAAGATAATTTCAGAAGAAGATAGCCCTCCATATTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS CAA 90 bp CTCTATAAATGTCTTCACCTTTTCGTTCATGGCATTTATGCTGCTTaGACGACCCGTAATATCCTGCTCCAGCATGGTGTCTTTACTGAT +
Preference number: 6 (lower is better)
Translates to: LYKCLHLFVHGIYAA*TTRNILLQHGVFTD
Trigger: ATCAGTAAAGACACCATGCTGGAGCAGGATATTACGGGTCGTCAAAGCAGCATAAATGCCATGAACGAAAAGGTGAAGACATTTATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp AATTTGGTTTCATTATTCTGCCTAGTGAGTTCATCCACCTTCTGCTaGAGCGTTTCTGCGCACTCATTGCTTTTCTCCAGCTCTTTATTC +
Preference number: 6 (lower is better)
Translates to: NLVSLFCLVSSSTFC*SVSAHSLLFSSSLF
Trigger: GAATAAAGAGCTGGAGAAAAGCAATGAGTGCGCAGAAACGCTCAAGCAGAAGGTGGATGAACTCACTAGGCAGAATAATGAAACCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS CAA 90 bp TCACTGTTTAGTTTGAGGGCATCAAAGATCATCTTTTCATCTAGCTaGCTCGTTTCCCGACCTCTCAGCTCAAATATGCTGGAAGAAGAA +
Preference number: 6 (lower is better)
Translates to: SLFSLRASKIIFSSS*LVSRPLSSNMLEEE
Trigger: TTCTTCTTCCAGCATATTTGAGCTGAGAGGTCGGGAAACGAGCAAGCTAGATGAAAAGATGATCTTTGATGCCCTCAAACTAAACAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194192.3
CDS TCA 72 bp CGGTGTCATCTACAACTTTTTGGCAAGGCTTTCTTCTaGAATACTTTCTTCCGGGAGAGTATTTTTCAGGAC +
Preference number: 6 (lower is better)
Translates to: RCHLQLFGKAFF*NTFFRESIFQD
Trigger: GTCCTGAAAAATACTCTCCCGGAAGAAAGTATTTCAGAAGAAAGCCTTGCCAAAAAGTTGTAGATGACACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000183006.5
CDS CCA 72 bp TTTTCTCAGTATGCTGTAAACACTGTTGCAAGCCATTaGAACATTTTTCCTTCGAGCTACTGTCAGAAGACC +
Preference number: 6 (lower is better)
Translates to: FSQYAVNTVASH*NIFPSSYCQKT
Trigger: GGTCTTCTGACAGTAGCTCGAAGGAAAAATGTTCCAATGGCTTGCAACAGTGTTTACAGCATACTGAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS CAA 72 bp TTTAAGGTCGTGACTTCTGTATGCATGCCACACTGTTaGTTCTTAGCTATCTCTAAGGGTGTCAAAAGCTTC +
Preference number: 6 (lower is better)
Translates to: FKVVTSVCMPHC*FLAISKGVKSF
Trigger: GAAGCTTTTGACACCCTTAGAGATAGCTAAGAACAAACAGTGTGGCATGCATACAGAAGTCACGACCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183302.6
CDS TCA 72 bp TTCTTTACAAGTTCAGTATCTTGGACATTCACAGTTTaGATGGCCTTCACAGATCTGCTTTTCTCTGACACC +
Preference number: 6 (lower is better)
Translates to: FFTSSVSWTFTV*MAFTDLLFSDT
Trigger: GGTGTCAGAGAAAAGCAGATCTGTGAAGGCCATTCAAACTGTGAATGTCCAAGATACTGAACTTGTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS GCA 72 bp CCACTTCCTGGAGATTCATATGAACTTTGTCTAAACTaGTTTTCAAGATACTTCTCCCATCTTCTACGAACC +
Preference number: 6 (lower is better)
Translates to: PLPGDSYELCLN*FSRYFSHLLRT
Trigger: GGTTCGTAGAAGATGGGAGAAGTATCTTGAAAAGCAGTTTAGACAAAGTTCATATGAATCTCCAGGAAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7
CDS CCA 72 bp TTACAAGTTCAGTATCTTGGACATTCACAGTTTGAATaGCCTTCACAGATCTGCTTTTCTCTGACACCCAAT +
Preference number: 6 (lower is better)
Translates to: LQVQYLGHSQFE*PSQICFSLTPN
Trigger: ATTGGGTGTCAGAGAAAAGCAGATCTGTGAAGGCCATTCAAACTGTGAATGTCCAAGATACTGAACTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS CAA 72 bp ATTTTCTCAGTATGCTGTAAACACTGTTGCAAGCCATaGGAACATTTTTCCTTCGAGCTACTGTCAGAAGAC +
Preference number: 6 (lower is better)
Translates to: IFSVCCKHCCKP*EHFSFELLSED
Trigger: GTCTTCTGACAGTAGCTCGAAGGAAAAATGTTCCAATGGCTTGCAACAGTGTTTACAGCATACTGAGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS CAA 72 bp ATTCTGCTGCTTTACAGGGAGTTGACATTTTGCTGTTaGCCAACCATGGTTTACCATAATTGCGTGTTAAAG +
Preference number: 6 (lower is better)
Translates to: ILLLYRELTFCC*PTMVYHNCVLK
Trigger: CTTTAACACGCAATTATGGTAAACCATGGTTGGCAAACAGCAAAATGTCAACTCCCTGTAAAGCAGCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115104.10
ENSMUST00000182018.8
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS TCA 72 bp CAACCCAGTTCAAGAGATCTTGAACAAATTTCATATTaGCTTCCTCTTCTGTCAAGTTCTGATCCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: QPSSRDLEQISY*LPLLSSSDPAK
Trigger: CTTTGCTGGATCAGAACTTGACAGAAGAGGAAGTCAATATGAAATTTGTTCAAGATCTCTTGAACTGGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS TCA 72 bp AGGTTACATAGTGAGACACCACTGTTGTTTGCTTTGTaGATTTCTGGTGCTTTCAGATTCCACTTTTCTTGT +
Preference number: 6 (lower is better)
Translates to: RLHSETPLLFAL*ISGAFRFHFSC
Trigger: ACAAGAAAAGTGGAATCTGAAAGCACCAGAAATTCACAAAGCAAACAACAGTGGTGTCTCACTATGTAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS CAA 90 bp TATTCATGCATTTTCTCAGTATGCTGTAAACACTGTTGCAAGCCATaGGAACATTTTTCCTTCGAGCTACTGTCAGAAGACCTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: YSCIFSVCCKHCCKP*EHFSFELLSEDLSF
Trigger: AAAAGAAAGGTCTTCTGACAGTAGCTCGAAGGAAAAATGTTCCAATGGCTTGCAACAGTGTTTACAGCATACTGAGAAAATGCATGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS CAA 90 bp CACATTCTTAAGAAACTTCACACTGTTCTTTACAAGTTCAGTATCTaGGACATTCACAGTTTGAATGGCCTTCACAGATCTGCTTTTCTC +
Preference number: 6 (lower is better)
Translates to: HILKKLHTVLYKFSI*DIHSLNGLHRSAFL
Trigger: GAGAAAAGCAGATCTGTGAAGGCCATTCAAACTGTGAATGTCCAAGATACTGAACTTGTAAAGAACAGTGTGAAGTTTCTTAAGAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS GCA 72 bp CAGCTACATAAAAAGCATGCTCTAAATTTGCAAGGTTaGTTTGAACAGCAACAGTATTCATGTCTATCAGGT +
Preference number: 6 (lower is better)
Translates to: QLHKKHALNLQG*FEQQQYSCLSG
Trigger: ACCTGATAGACATGAATACTGTTGCTGTTCAAAGCAACCTTGCAAATTTAGAGCATGCTTTTTATGTAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183006.5
ENSMUST00000183034.5
ENSMUST00000187486.7
CDS GCA 72 bp TATTTCCCATCTATCAGAATCTGTACATCAATCACATaGTGGCGTAAAAGGTTCTCACATTCAAGTATGTAC +
Preference number: 6 (lower is better)
Translates to: YFPSIRICTSIT*WRKRFSHSSMY
Trigger: GTACATACTTGAATGTGAGAACCTTTTACGCCAGCATGTGATTGATGTACAGATTCTGATAGATGGGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000183302.6
ENSMUST00000185269.7
ENSMUST00000185897.7
ENSMUST00000187486.7
CDS CAA 72 bp AAGAAACTTCACACTGTTCTTTACAAGTTCAGTATCTaGGACATTCACAGTTTGAATGGCCTTCACAGATCT +
Preference number: 6 (lower is better)
Translates to: KKLHTVLYKFSI*DIHSLNGLHRS
Trigger: AGATCTGTGAAGGCCATTCAAACTGTGAATGTCCAAGATACTGAACTTGTAAAGAACAGTGTGAAGTTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
CDS CAA 90 bp GAACTTAGAGCGTCTTTCTTTTCTTGGATAGTATCCTCCATTTCTTaGAATTTCCTTGACAAGTTATTAGTTTTCTCAAACACCAGAGCT +
Preference number: 6 (lower is better)
Translates to: ELRASFFSWIVSSIS*NFLDKLLVFSNTRA
Trigger: AGCTCTGGTGTTTGAGAAAACTAATAACTTGTCAAGGAAATTCAAAGAAATGGAGGATACTATCCAAGAAAAGAAAGACGCTCTAAGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097785.10
ENSMUST00000097786.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185269.7
CDS GCA 72 bp AGAATTTTGGAGGCTAATTCATTTGTAATCAACTCTTaGTGTAAGGAAGATGATGTGGGAAATATTTCACCA +
Preference number: 6 (lower is better)
Translates to: RILEANSFVINS*CKEDDVGNISP
Trigger: TGGTGAAATATTTCCCACATCATCTTCCTTACAGCAAGAGTTGATTACAAATGAATTAGCCTCCAAAATTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097785.10
ENSMUST00000115104.10
ENSMUST00000183034.5
ENSMUST00000185897.7