RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DSPP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053268

Ensembl transcript IDs: ENSMUST00000112771.2

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCCAGATTCTCTCTGAGAGAGCTGGAGCTCGGCTCCACTCCCTATaGGCTCCATGGGTTCCACACAGTCTGCACATCTCTCCTGTCATC +
Preference number: 1 (lower is better)
Translates to: TQILSERAGARLHSL*APWVPHSLHISPVI
Trigger: GATGACAGGAGAGATGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCTCCAGCTCTCTCAGAGAGAATCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CCA 90 bp AGCTCCATGGGTTCCACACAGTCTGCACATCTCTCCTGTCATCATTaGGTTAGGAACCTTCACTGCCTTCCCATCACTCACCAAGAGGTC +
Preference number: 1 (lower is better)
Translates to: SSMGSTQSAHLSCHH*VRNLHCLPITHQEV
Trigger: GACCTCTTGGTGAGTGATGGGAAGGCAGTGAAGGTTCCTAACCCAATGATGACAGGAGAGATGTGCAGACTGTGTGGAACCCATGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR GCA 90 bp CAGTCTGCACATCTCTCCTGTCATCATTGGGTTAGGAACCTTCACTaGCTTCCCATCACTCACCAAGAGGTCACACAGAGGATATCATGG +
Preference number: 1 (lower is better)
Translates to: QSAHLSCHHWVRNLH*LPITHQEVTQRISW
Trigger: CCATGATATCCTCTGTGTGACCTCTTGGTGAGTGATGGGAAGGCAGTGAAGGTTCCTAACCCAATGATGACAGGAGAGATGTGCAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR GCA 90 bp GTTCACACCTCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTaGTTTCAGAGGAGCCCTAGAGCCCAAACAGGGTCCCACTCTTGT +
Preference number: 1 (lower is better)
Translates to: VHTSCLGVVYSHYLS*FQRSPRAQTGSHSC
Trigger: ACAAGAGTGGGACCCTGTTTGGGCTCTAGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGAGGTGTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR GCA 90 bp GATCACAACCTCGATGAGTGGGTGTGGCGGGTTACTAGAGGCAGGTaGTTCATAAGTTACAGCAAACAAAGGAGAGTTTGGGGTCTAGTA +
Preference number: 1 (lower is better)
Translates to: DHNLDEWVWRVTRGR*FISYSKQRRVWGLV
Trigger: TACTAGACCCCAAACTCTCCTTTGTTTGCTGTAACTTATGAAGCACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CCA 90 bp GATGAGTTTTCTACCCATGGCTTTAGTGATCACAACCTCGATGAGTaGGTGTGGCGGGTTACTAGAGGCAGGTGCTTCATAAGTTACAGC +
Preference number: 1 (lower is better)
Translates to: DEFSTHGFSDHNLDE*VWRVTRGRCFISYS
Trigger: GCTGTAACTTATGAAGCACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATCACTAAAGCCATGGGTAGAAAACTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR GCA 90 bp TACATATCCATCCCATGCAGAAATTTAACCGCATGTGTCAGATCCTaGCCAAGCCATCCTTGGGGCTCTTTTCTCATTCATTCTTCGGAA +
Preference number: 1 (lower is better)
Translates to: YISIPCRNLTACVRS*PSHPWGSFLIHSSE
Trigger: TTCCGAAGAATGAATGAGAAAAGAGCCCCAAGGATGGCTTGGGCAGGATCTGACACATGCGGTTAAATTTCTGCATGGGATGGATATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CCA 90 bp AAGGTTTTCTTGAGACAATCCCAGTTCACACCTCCTGTCTTGGTGTaGTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTAGAG +
Preference number: 1 (lower is better)
Translates to: KVFLRQSQFTPPVLV*FILITSLAFRGALE
Trigger: CTCTAGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGAGGTGTGAACTGGGATTGTCTCAAGAAAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR TCA 90 bp CAGTTTACGATGAGTTTTCTACCCATGGCTTTAGTGATCACAACCTCGATGAGTTGGTGCCCGGAGCACTaGGGGAGGAGGCTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: QFTMSFLPMALVITTSMSWCPEH*GRRLQQ
Trigger: CTGCTGCAGCCTCCTCCCTCAGTGCTCCGGGCACCA...ACTCATCGAGGTTGTGATCACTAAAGCCATGGGTAGAAAACTCATCGTAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR GCA 90 bp GGTGGTACACCCAGATTCTCTCTGAGAGAGCTGGAGCTCGGCTCCACTCCCTATGTTAGGAACCTTCACTaGCTTCCCATCACTCACCAA +
Preference number: 2 (lower is better)
Translates to: GGTPRFSLRELELGSTPYVRNLH*LPITHQ
Trigger: TTGGTGAGTGATGGGAAGGCAGTGAAGGTTCCTAAC...ATAGGGAGTGGAGCCGAGCTCCAGCTCTCTCAGAGAGAATCTGGGTGTACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR GCA 90 bp TTCAGAGGAGCCCTAGAGCCCAAACAGGGTCCCACTCTTGTCACGCACAGCCTTAGACACTGTTCAAAGTaGAGGGGTTGGGGACTTAGT +
Preference number: 2 (lower is better)
Translates to: FRGALEPKQGPTLVTHSLRHCSK*RGWGLS
Trigger: ACTAAGTCCCCAACCCCTGCACTTTGAACAGTGTCT...AAGGCTGTGCGTGACAAGAGTGGGACCCTGTTTGGGCTCTAGGGCTCCTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR CCA 90 bp GGGCCACTGCTGGAAGGGAGACACTGTTCAAAGTGCAGGGGTTGGGGACTTAGTTGCCCAAGCCATCCTTaGGGCTCTTTTCTCATTCAT +
Preference number: 2 (lower is better)
Translates to: GPLLEGRHCSKCRGWGLSCPSHP*GSFLIH
Trigger: ATGAATGAGAAAAGAGCCCCAAGGATGGCTTGGGCA...ACTAAGTCCCCAACCCCTGCACTTTGAACAGTGTCTCCCTTCCAGCAGTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CAA 90 bp GAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATCCGTGTaGCTCGTTTATTTAAGGTTTGAGGGCCACTGCTGGAAGGGAGAC +
Preference number: 2 (lower is better)
Translates to: ESSEYDPTSRNHPSV*LVYLRFEGHCWKGD
Trigger: GTCTCCCTTCCAGCAGTGGCCCTCAAACCTTAAATAAACGAGCAACACGGATGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR TCA 90 bp TTCTTGAGACAATCCCAGTTCACACCTCCTGTCTTGGTGTGGTTTATTCTCATTCGGCTCCACTCCCTATaGGCTCCATGGGTTCCACAC +
Preference number: 2 (lower is better)
Translates to: FLRQSQFTPPVLVWFILIRLHSL*APWVPH
Trigger: GTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCG...AATGAGAATAAACCACACCAAGACAGGAGGTGTGAACTGGGATTGTCTCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR TCA 90 bp ACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATCCGTGTTGCACTCACTGCACAACATaGAGACTAGCTCTCTGGTGC +
Preference number: 2 (lower is better)
Translates to: TWRAQNMIPPPEIIHPCCTHCTT*RLALWC
Trigger: GCACCAGAGAGCTAGTCTTCATGTTGTGCAGTGAGT...GCAACACGGATGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR GCA 90 bp TTCTTGAGACAATCCCAGTTCACACCTCCTGTCTTGGTGTGGTTTATTCTCATTGCATGTGTCAGATCCTaGCCAAGCCATCCTTGGGGC +
Preference number: 2 (lower is better)
Translates to: FLRQSQFTPPVLVWFILIACVRS*PSHPWG
Trigger: GCCCCAAGGATGGCTTGGGCAGGATCTGACACATGC...AATGAGAATAAACCACACCAAGACAGGAGGTGTGAACTGGGATTGTCTCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR GCA 90 bp GCTTTAGTGATCACAACCTCGATGAGTGGGTGTGGCGGGTTACTAGAGGCAGGTCAAATTTGGCATAACTaGCTATGTGGGGAAATAGGG +
Preference number: 2 (lower is better)
Translates to: ALVITTSMSGCGGLLEAGQIWHN*LCGEIG
Trigger: CCCTATTTCCCCACATAGGCAGTTATGCCAAATTTG...ACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATCACTAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR GCA 90 bp TCACACCTCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGGGGTTCCACACAGTCTaGACATCTCTCCTGTCATCA +
Preference number: 2 (lower is better)
Translates to: SHLLSWCGLFSLPLLLSEGFHTV*TSLLSS
Trigger: TGATGACAGGAGAGATGTGCAGACTGTGTGGAACCC...CTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGAGGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CAA 90 bp AGGGTTAAGGTTTTCTTGAGACAATCCCAGTTCACACCTCCTGTCTaGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: RVKVFLRQSQFTPPV*VWFILITSLAFRGA
Trigger: GGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGAGGTGTGAACTGGGATTGTCTCAAGAAAACCTTAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR GCA 90 bp TCACACCTCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGTACATATCCATCCCATaGAGAAATTTAACCGCATGT +
Preference number: 2 (lower is better)
Translates to: SHLLSWCGLFSLPLLLSEYISIP*RNLTAC
Trigger: ACATGCGGTTAAATTTCTGCATGGGATGGATATGTA...CTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGAGGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR CCA 90 bp TTTACATTTCTTACACAGTTTACGATGAGTTTTCTACCCATGGCTTTAGTGATCCACATGTACCAAAGGTaGTACACCCAGATTCTCTCT +
Preference number: 2 (lower is better)
Translates to: FTFLTQFTMSFLPMALVIHMYQR*YTQILS
Trigger: AGAGAGAATCTGGGTGTACCACCTTTGGTACATGTG...GATCACTAAAGCCATGGGTAGAAAACTCATCGTAAACTGTGTAAGAAATGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CCA 72 bp CTTTCTGGTGAGGGGTCTGGAGTCACGTCACAGCTGTaGCAGCTCAGAAGCCTGGAGCTTTACAGTGTGGGC +
Preference number: 3 (lower is better)
Translates to: LSGEGSGVTSQL*QLRSLELYSVG
Trigger: GCCCACACTGTAAAGCTCCAGGCTTCTGAGCTGCCACAGCTGTGACGTGACTCCAGACCCCTCACCAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR TCA 72 bp CTCTCTGAGAGAGCTGGAGCTCGGCTCCACTCCCTATaGGCTCCATGGGTTCCACACAGTCTGCACATCTCT +
Preference number: 3 (lower is better)
Translates to: LSERAGARLHSL*APWVPHSLHIS
Trigger: AGAGATGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCTCCAGCTCTCTCAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR CAA 90 bp GTGATCACAACCTCGATGAGTGGGTGTGGCGGGTTACTAGAGGCAGGTGCTTCACTGCCCAAGCCATCCTaGGGGCTCTTTTCTCATTCA +
Preference number: 3 (lower is better)
Translates to: VITTSMSGCGGLLEAGASLPKPS*GLFSHS
Trigger: TGAATGAGAAAAGAGCCCCAAGGATGGCTTGGGCAG...TGAAGCACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR TCA 72 bp ACACATGTACCAAAGGTGGTACACCCAGATTCTCTCTaGGAGAGCTGGAGCTCGGCTCCACTCCCTATGAGC +
Preference number: 3 (lower is better)
Translates to: THVPKVVHPDSL*ESWSSAPLPMS
Trigger: GCTCATAGGGAGTGGAGCCGAGCTCCAGCTCTCTCAGAGAGAATCTGGGTGTACCACCTTTGGTACATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR GCA 72 bp CATCTCTCCTGTCATCATTGGGTTAGGAACCTTCACTaGCTTCCCATCACTCACCAAGAGGTCACACAGAGG +
Preference number: 3 (lower is better)
Translates to: HLSCHHWVRNLH*LPITHQEVTQR
Trigger: CCTCTGTGTGACCTCTTGGTGAGTGATGGGAAGGCAGTGAAGGTTCCTAACCCAATGATGACAGGAGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CCA 72 bp GGTTCCACACAGTCTGCACATCTCTCCTGTCATCATTaGGTTAGGAACCTTCACTGCCTTCCCATCACTCAC +
Preference number: 3 (lower is better)
Translates to: GSTQSAHLSCHH*VRNLHCLPITH
Trigger: GTGAGTGATGGGAAGGCAGTGAAGGTTCCTAACCCAATGATGACAGGAGAGATGTGCAGACTGTGTGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CCA 72 bp TCTACCCATGGCTTTAGTGATCACAACCTCGATGAGTaGGTGTGGCGGGTTACTAGAGGCAGGTGCTTCATA +
Preference number: 3 (lower is better)
Translates to: STHGFSDHNLDE*VWRVTRGRCFI
Trigger: TATGAAGCACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATCACTAAAGCCATGGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR GCA 72 bp TCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTaGTTTCAGAGGAGCCCTAGAGCCCAAACAGGGTCC +
Preference number: 3 (lower is better)
Translates to: SCLGVVYSHYLS*FQRSPRAQTGS
Trigger: GGACCCTGTTTGGGCTCTAGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR GCA 72 bp CTCGATGAGTGGGTGTGGCGGGTTACTAGAGGCAGGTaGTTCATAAGTTACAGCAAACAAAGGAGAGTTTGG +
Preference number: 3 (lower is better)
Translates to: LDEWVWRVTRGR*FISYSKQRRVW
Trigger: CCAAACTCTCCTTTGTTTGCTGTAACTTATGAAGCACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CCA 72 bp CATGGCTTTAGTGATCACAACCTCGATGAGTGGGTGTaGCGGGTTACTAGAGGCAGGTGCTTCATAAGTTAC +
Preference number: 3 (lower is better)
Translates to: HGFSDHNLDEWV*RVTRGRCFISY
Trigger: GTAACTTATGAAGCACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATCACTAAAGCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CCA 72 bp CTGCTGGAAGGGAGACACTGTTCAAAGTGCAGGGGTTaGGGACTTAGTACATATCCATCCCATGCAGAAATT +
Preference number: 3 (lower is better)
Translates to: LLEGRHCSKCRG*GLSTYPSHAEI
Trigger: AATTTCTGCATGGGATGGATATGTACTAAGTCCCCAACCCCTGCACTTTGAACAGTGTCTCCCTTCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR CAA 90 bp CCGCATGTGTCAGATCCTGCCCAAGCCATCCTTGGGGCTCTTTTCTCATTCATTGACAGAGTAGTTGAGTaGAATGTCACAGAACAGCAT +
Preference number: 3 (lower is better)
Translates to: PHVSDPAQAILGALFSFIDRVVE*NVTEQH
Trigger: ATGCTGTTCTGTGACATTCAACTCAACTACTCTGTC...AATGAATGAGAAAAGAGCCCCAAGGATGGCTTGGGCAGGATCTGACACATGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR GCA 72 bp ATCCCATGCAGAAATTTAACCGCATGTGTCAGATCCTaGCCAAGCCATCCTTGGGGCTCTTTTCTCATTCAT +
Preference number: 3 (lower is better)
Translates to: IPCRNLTACVRS*PSHPWGSFLIH
Trigger: ATGAATGAGAAAAGAGCCCCAAGGATGGCTTGGGCAGGATCTGACACATGCGGTTAAATTTCTGCATGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR CAA 90 bp ACGATGAGTTTTCTACCCATGGCTTTAGTGATCACAACCTCGATGAGTGGGTGTCAAACAAAGGAGAGTTaGGGGTCTAGTAGAAGGCAA +
Preference number: 3 (lower is better)
Translates to: TMSFLPMALVITTSMSGCQTKES*GSSRRQ
Trigger: TTGCCTTCTACTAGACCCCAAACTCTCCTTTGTTTG...ACACCCACTCATCGAGGTTGTGATCACTAAAGCCATGGGTAGAAAACTCATCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR TCA 72 bp ACTAATAACACAGTGGTACATGGAGAGCTCAGAATATaGTCCCACCTCCCGAAATCATCCATCCGTGTTGCT +
Preference number: 3 (lower is better)
Translates to: TNNTVVHGELRI*SHLPKSSIRVA
Trigger: AGCAACACGGATGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGTACCACTGTGTTATTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CCA 72 bp TTAACCGCATGTGTCAGATCCTGCCCAAGCCATCCTTaGGGCTCTTTTCTCATTCATTCTTCGGAATTTTCA +
Preference number: 3 (lower is better)
Translates to: LTACVRSCPSHP*GSFLIHSSEFS
Trigger: TGAAAATTCCGAAGAATGAATGAGAAAAGAGCCCCAAGGATGGCTTGGGCAGGATCTGACACATGCGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CCA 72 bp TTGAGACAATCCCAGTTCACACCTCCTGTCTTGGTGTaGTTTATTCTCATTACCTCTCTTGCTTTCAGAGGA +
Preference number: 3 (lower is better)
Translates to: LRQSQFTPPVLV*FILITSLAFRG
Trigger: TCCTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGAGGTGTGAACTGGGATTGTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR CAA 90 bp ATTCGAAGAAAACTAATAACACAGTGGTACATGGAGAGCTCAGAATATGATCCCGATTATCTCAGCACCTaGGATAGGGCCAGTAGTTGC +
Preference number: 3 (lower is better)
Translates to: IRRKLITQWYMESSEYDPDYLST*DRASSC
Trigger: GCAACTACTGGCCCTATCCAAGGTGCTGAGATAATC...GGGATCATATTCTGAGCTCTCCATGTACCACTGTGTTATTAGTTTTCTTCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR-3UTR CAA 90 bp TCACACCTCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGACAGCCTTACAACTCTaGATTAAACTGTTTGAGCTG +
Preference number: 3 (lower is better)
Translates to: SHLLSWCGLFSLPLLLSETALQL*IKLFEL
Trigger: CAGCTCAAACAGTTTAATCAAGAGTTGTAAGGCTGT...CTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGAGGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp AGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACATCTCTGCTGTCGCTGCTGTTaGTGCTGTCGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSAPLPMSSMGSTQSAHLCCRCC*CCRCCC
Trigger: GCAGCAGCAGCGACAGCAGCAACAGCAGCGACAGCA...GAGATGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CTGGAGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACATGTCACTGCTGTCGCTaGTGTTGCTGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LELGSTPYELHGFHTVCTCHCCR*CCCCRC
Trigger: GCAGCGACAGCAGCAACAGCAGCGACAGCAGTGACA...TGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CTGGAGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACATACTGTTGCTGTCGCTaGTGTCACTGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LELGSTPYELHGFHTVCTYCCCR*CHCCRC
Trigger: GCAGCGACAGCAGTGACAGCAGCGACAGCAACAGTA...TGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp AGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACATCTCTGCTGTCGCTGCTGCTaGTGTCACTGCTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SSAPLPMSSMGSTQSAHLCCRCC*CHCCHC
Trigger: GCAGTGACAGCAGTGACAGCAGCAGCAGCGACAGCA...GAGATGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GGGCCACTGCTGGAAGGGAGACACTGTTCAAAGTGCAGGGGTTGGGGACTTAGTCTGCATCTTCCCCGATaGTTGGTGTCACCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: GPLLEGRHCSKCRGWGLSLHLPR*LVSPQS
Trigger: GGACTGAGGTGACACCAAGCATCGGGGAAGATGCAG...ACTAAGTCCCCAACCCCTGCACTTTGAACAGTGTCTCCCTTCCAGCAGTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CTGGAGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACATGTCACTGCTATCGCTaGTGTCACTGCTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LELGSTPYELHGFHTVCTCHCYR*CHCCHC
Trigger: GCAGTGACAGCAGTGACAGCAGCGATAGCAGTGACA...TGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CTGGAGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACATGTCACTACTGTCGCTaGTGTCACTGCTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LELGSTPYELHGFHTVCTCHYCR*CHCCHC
Trigger: GCAGTGACAGCAGTGACAGCAGCGACAGTAGTGACA...TGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CTGGAGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACATGCTGTCACTGTCACTaGTGTCACTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LELGSTPYELHGFHTVCTCCHCH*CHCCCC
Trigger: GCAGCAACAGCAGTGACAGCAGTGACAGTGACAGCA...TGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CCA 90 bp CTGGAGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACAGGAGGCTCATTTTCCTaGACAAGGGTCGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: LELGSTPYELHGFHTVCTGGSFS*TRVASP
Trigger: TGGAGATGCGACCCTTGTCCAGGAAAATGAGCCTCC...TGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CCA 90 bp AGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACATCTCATCTTCCCCGATGCTTaGTGTCACCTCAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SSAPLPMSSMGSTQSAHLIFPDA*CHLSPL
Trigger: CAGGGGACTGAGGTGACACCAAGCATCGGGGAAGAT...GAGATGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR TCA 90 bp GGGCCACTGCTGGAAGGGAGACACTGTTCAAAGTGCAGGGGTTGGGGACTTAGTAGAAGGACATGCTTCTaGCTGGCTGATGATCCCACC +
Preference number: 4 (lower is better)
Translates to: GPLLEGRHCSKCRGWGLSRRTCF*LADDPT
Trigger: GGTGGGATCATCAGCCAGTCAGAAGCATGTCCTTCT...ACTAAGTCCCCAACCCCTGCACTTTGAACAGTGTCTCCCTTCCAGCAGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CTGGAGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACATGTCACTGCTGTCGCTaGTGTCACTACTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: LELGSTPYELHGFHTVCTCHCCR*CHYCHY
Trigger: GTAGTGACAGTAGTGACAGCAGCGACAGCAGTGACA...TGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TGTACCAAAGGTGGTACACCCAGATTCTCTCTGAGAGAGCTGGAGCTCGGCTCCTGTCACTGCTGTCACTaGTGTCACTGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: CTKGGTPRFSLRELELGSCHCCH*CHCCRC
Trigger: GCAGCGACAGCAGTGACAGCAGTGACAGCAGTGACA...GGAGCCGAGCTCCAGCTCTCTCAGAGAGAATCTGGGTGTACCACCTTTGGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GGGCCACTGCTGGAAGGGAGACACTGTTCAAAGTGCAGGGGTTGGGGACTTAGTTGTCACTGCTGTCACTaGTGTCACTGCTATCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPLLEGRHCSKCRGWGLSCHCCH*CHCYRC
Trigger: GCAGCGATAGCAGTGACAGCAGTGACAGCAGTGACA...ACTAAGTCCCCAACCCCTGCACTTTGAACAGTGTCTCCCTTCCAGCAGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp AGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACATCTCTGTCACTACTGTCACTaGTGTCGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSAPLPMSSMGSTQSAHLCHYCH*CRCCCC
Trigger: GCAGCAACAGCAGCGACAGCAGTGACAGTAGTGACA...GAGATGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GGGCCACTGCTGGAAGGGAGACACTGTTCAAAGTGCAGGGGTTGGGGACTTAGTTGTCGCTACTGTCACTaGTGTCACTACTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPLLEGRHCSKCRGWGLSCRYCH*CHYCRC
Trigger: GCAGCGACAGTAGTGACAGCAGTGACAGTAGCGACA...ACTAAGTCCCCAACCCCTGCACTTTGAACAGTGTCTCCCTTCCAGCAGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GGGCCACTGCTGGAAGGGAGACACTGTTCAAAGTGCAGGGGTTGGGGACTTAGTTGTCGCTGCTGTCACTaGTGTCACTGCTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: GPLLEGRHCSKCRGWGLSCRCCH*CHCCHY
Trigger: GTAGTGACAGCAGTGACAGCAGTGACAGCAGCGACA...ACTAAGTCCCCAACCCCTGCACTTTGAACAGTGTCTCCCTTCCAGCAGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GTGATCACAACCTCGATGAGTGGGTGTGGCGGGTTACTAGAGGCAGGTGCTTCATGCTGTCACTGCTGTTaGTGCTGTCGCTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: VITTSMSGCGGLLEAGASCCHCC*CCRCCH
Trigger: GTGACAGCAGCGACAGCAGCAACAGCAGTGACAGCA...TGAAGCACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp AGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACATCTCTACTGCTGCTGTCGCTaGTGTCACTACTACTGTTGC +
Preference number: 4 (lower is better)
Translates to: SSAPLPMSSMGSTQSAHLYCCCR*CHYYCC
Trigger: GCAACAGTAGTAGTGACAGCAGCGACAGCAGCAGTA...GAGATGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CCA 90 bp TGTACCAAAGGTGGTACACCCAGATTCTCTCTGAGAGAGCTGGAGCTCGGCTCCCCCTTAGTGCCATCATaGCTCTCCCTTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: CTKGGTPRFSLRELELGSPLVPS*LSLPSP
Trigger: AGGAGATGGAAGGGAGAGCCATGATGGCACTAAGGG...GGAGCCGAGCTCCAGCTCTCTCAGAGAGAATCTGGGTGTACCACCTTTGGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR TCA 90 bp CTGGAGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACAGTCATCTGTATCAGATaGGTCATCACTGCTATCGTC +
Preference number: 4 (lower is better)
Translates to: LELGSTPYELHGFHTVCTVICIR*VITAIV
Trigger: GACGATAGCAGTGATGACTCATCTGATACAGATGAC...TGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR TCA 90 bp GGGCCACTGCTGGAAGGGAGACACTGTTCAAAGTGCAGGGGTTGGGGACTTAGTCTAATCATCACTGGTTaGGTGGTTACTGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: GPLLEGRHCSKCRGWGLSLIITG*VVTVTA
Trigger: GGCAGTGACAGTAACCACTCAACCAGTGATGATTAG...ACTAAGTCCCCAACCCCTGCACTTTGAACAGTGTCTCCCTTCCAGCAGTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TGTACCAAAGGTGGTACACCCAGATTCTCTCTGAGAGAGCTGGAGCTCGGCTCCTGCTGTCACTACTGTTaGTGCTGTCACTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: CTKGGTPRFSLRELELGSCCHYC*CCHCCH
Trigger: GTGACAGCAGTGACAGCAGCAACAGTAGTGACAGCA...GGAGCCGAGCTCCAGCTCTCTCAGAGAGAATCTGGGTGTACCACCTTTGGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CCGCATGTGTCAGATCCTGCCCAAGCCATCCTTGGGGCTCTTTTCTCATTCATTTGTTGCTGCTGTCGCTaGTCTCACTGCTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: PHVSDPAQAILGALFSFICCCCR*SHCSHC
Trigger: GCAGTGAGAGCAGTGAGAGCAGCGACAGCAGCAACA...AATGAATGAGAAAAGAGCCCCAAGGATGGCTTGGGCAGGATCTGACACATGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CCGCATGTGTCAGATCCTGCCCAAGCCATCCTTGGGGCTCTTTTCTCATTCATTTGTCGCTGCTGTCACTaGTGTCACTGCTGTCGCTAC +
Preference number: 4 (lower is better)
Translates to: PHVSDPAQAILGALFSFICRCCH*CHCCRY
Trigger: GTAGCGACAGCAGTGACAGCAGTGACAGCAGCGACA...AATGAATGAGAAAAGAGCCCCAAGGATGGCTTGGGCAGGATCTGACACATGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CCA 90 bp TGTACCAAAGGTGGTACACCCAGATTCTCTCTGAGAGAGCTGGAGCTCGGCTCCTGTCCCAGGTTACTGTaGGCAGCTGATTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: CTKGGTPRFSLRELELGSCPRLL*AADFSA
Trigger: TGCTGAGAAATCAGCTGCCCACAGTAACCTGGGACA...GGAGCCGAGCTCCAGCTCTCTCAGAGAGAATCTGGGTGTACCACCTTTGGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR TCA 90 bp TTCAGAGGAGCCCTAGAGCCCAAACAGGGTCCCACTCTTGTCACGCACAGCCTTGCATGTACCCCATCATaGCCGTATGTTTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: FRGALEPKQGPTLVTHSLACTPS*PYVSMS
Trigger: TGACATAGAAACATACGGTCATGATGGGGTACATGC...AAGGCTGTGCGTGACAAGAGTGGGACCCTGTTTGGGCTCTAGGGCTCCTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATCCGTGTTGCGATGATCCCACCCTCTaGATCTCGGGTGTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: TWRAQNMIPPPEIIHPCCDDPTL*ISGVFG
Trigger: CCCAAAGACACCCGAGATGCAGAGGGTGGGATCATC...GCAACACGGATGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GTGATCACAACCTCGATGAGTGGGTGTGGCGGGTTACTAGAGGCAGGTGCTTCATGTCACTACTGTTGCTaGTGTCACTGCTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: VITTSMSGCGGLLEAGASCHYCC*CHCCHY
Trigger: GTAGTGACAGCAGTGACAGCAGCAACAGTAGTGACA...TGAAGCACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTAGAGCCCAAACAGGGTATCGCTGCTGTCACTaGTGTCACTGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: VYSHYLSCFQRSPRAQTGYRCCH*CHCCRC
Trigger: GCAGCGACAGCAGTGACAGCAGTGACAGCAGCGATA...CCCTGTTTGGGCTCTAGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATCCGTGTTGCTGTCACTACTGTCGCTaGTGTCACTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TWRAQNMIPPPEIIHPCCCHYCR*CHCCCC
Trigger: GCAGCAACAGCAGTGACAGCAGCGACAGTAGTGACA...GCAACACGGATGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR TCA 90 bp TCACACCTCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGGGGTGTCTTTGGGGCTaGGCTTTTGGTTGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: SHLLSWCGLFSLPLLLSEGCLWG*AFGCPA
Trigger: CGCAGGACAACCAAAAGCTCAGCCCCAAAGACACCC...CTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGAGGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR TCA 90 bp GTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTAGAGCCCAAACAGGGGTTACTGTGGGCAGCTaGTTTCTCAGCAGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VYSHYLSCFQRSPRAQTGVTVGS*FLSSAL
Trigger: CAAGGCACTGCTGAGAAATCAGCTGCCCACAGTAAC...CCCTGTTTGGGCTCTAGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CCGCATGTGTCAGATCCTGCCCAAGCCATCCTTGGGGCTCTTTTCTCATTCATTAGTATCATCCAAACCTaGATCTTCCCCGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: PHVSDPAQAILGALFSFISIIQT*IFPDAW
Trigger: CCAAGCATCGGGGAAGATGCAGGTTTGGATGATACT...AATGAATGAGAAAAGAGCCCCAAGGATGGCTTGGGCAGGATCTGACACATGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CCGCATGTGTCAGATCCTGCCCAAGCCATCCTTGGGGCTCTTTTCTCATTCATTCACTGCTGTCTGATTTaGTCTCACTGTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PHVSDPAQAILGALFSFIHCCLI*SHCHCC
Trigger: ACAGCAGTGACAGTGAGAGCAAATCAGACAGCAGTG...AATGAATGAGAAAAGAGCCCCAAGGATGGCTTGGGCAGGATCTGACACATGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp AGCCCAAACAGGGTCCCACTCTTGTCACGCACAGCCTTACAACTCTTGATTAAATGTCGCTGCTGTCACTaGTGTCGTCACTACTGTCAC +
Preference number: 4 (lower is better)
Translates to: SPNRVPLLSRTALQLLIKCRCCH*CRHYCH
Trigger: GTGACAGTAGTGACGACAGCAGTGACAGCAGCGACA...TTTAATCAAGAGTTGTAAGGCTGTGCGTGACAAGAGTGGGACCCTGTTTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TGGCGGGTTACTAGAGGCAGGTGCTTCATAAGTTACAGCAAACAAAGGAGAGTTTGTCGCTGCTGTCACTaGTGTCGCTGCTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: WRVTRGRCFISYSKQRRVCRCCH*CRCCHY
Trigger: GTAGTGACAGCAGCGACAGCAGTGACAGCAGCGACA...AACTCTCCTTTGTTTGCTGTAACTTATGAAGCACCTGCCTCTAGTAACCCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ACACAGTGGTACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATGCTGTCACTACTACTaGTGCTGTCGCTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: TQWYMESSEYDPTSRNHPCCHYY*CCRCCH
Trigger: GTGACAGCAGCGACAGCAGCAGTAGTAGTGACAGCA...TGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGTACCACTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTAGAGCCCAAACAGGGTATCGCTGCTGTCACTaGTGTCACTGCTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: VYSHYLSCFQRSPRAQTGYRCCH*CHCCHC
Trigger: GCAGTGACAGCAGTGACAGCAGTGACAGCAGCGATA...CCCTGTTTGGGCTCTAGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTAGAGCCCAAACAGGGTACTGCTGCTGTCGCTaGTGTCACTACTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VYSHYLSCFQRSPRAQTGYCCCR*CHYYCC
Trigger: GCAGCAGTAGTAGTGACAGCAGCGACAGCAGCAGTA...CCCTGTTTGGGCTCTAGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTTGCTGTCACTGCTGTTaGTGCTGTCGCTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SCLGVVYSHYLSCFQRSPCCHCC*CCRCSH
Trigger: GTGAGAGCAGCGACAGCAGCAACAGCAGTGACAGCA...AGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TTCTTGAGACAATCCCAGTTCACACCTCCTGTCTTGGTGTGGTTTATTCTCATTTGTCGCTGCTGTCACTaGTGTCGCTGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: FLRQSQFTPPVLVWFILICRCCH*CRCCRC
Trigger: GCAGCGACAGCAGCGACAGCAGTGACAGCAGCGACA...AATGAGAATAAACCACACCAAGACAGGAGGTGTGAACTGGGATTGTCTCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CAGTTTACGATGAGTTTTCTACCCATGGCTTTAGTGATCACAACCTCGATGAGTTGTCGCTGCTGTCGCTaGTGTCACTGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QFTMSFLPMALVITTSMSCRCCR*CHCCRC
Trigger: GCAGCGACAGCAGTGACAGCAGCGACAGCAGCGACA...ACTCATCGAGGTTGTGATCACTAAAGCCATGGGTAGAAAACTCATCGTAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CCGCATGTGTCAGATCCTGCCCAAGCCATCCTTGGGGCTCTTTTCTCATTCATTTGCTGTCACCATCACTaGTGTCAGAACTGCTATCCT +
Preference number: 4 (lower is better)
Translates to: PHVSDPAQAILGALFSFICCHHH*CQNCYP
Trigger: AGGATAGCAGTTCTGACAGCAGTGATGGTGACAGCA...AATGAATGAGAAAAGAGCCCCAAGGATGGCTTGGGCAGGATCTGACACATGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GCTTTAGTGATCACAACCTCGATGAGTGGGTGTGGCGGGTTACTAGAGGCAGGTTGTTGCTGTCACTGTTaGCATTACCAGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ALVITTSMSGCGGLLEAGCCCHC*HYQTCC
Trigger: ACAGCAAGTCTGGTAATGGCAACAGTGACAGCAACA...ACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATCACTAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CCA 90 bp GGGCCACTGCTGGAAGGGAGACACTGTTCAAAGTGCAGGGGTTGGGGACTTAGTTCCATTGTGTCCATTTaGGAAGCCTTCTTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GPLLEGRHCSKCRGWGLSSIVSI*EAFLFF
Trigger: AAAGAACAAGAAGGCTTCCCAAATGGACACAATGGA...ACTAAGTCCCCAACCCCTGCACTTTGAACAGTGTCTCCCTTCCAGCAGTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR TCA 90 bp GTGATCACAACCTCGATGAGTGGGTGTGGCGGGTTACTAGAGGCAGGTGCTTCATATCTTTACTTCCACTaGGTTTCCCAGATTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VITTSMSGCGGLLEAGASYLYFH*VSQILW
Trigger: CCAAAGAATCTGGGAAACTCAGTGGAAGTAAAGATA...TGAAGCACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATCCGTGTTGCTTGGGATCATCTCCTTaGATGGACTCGTCATCGAAC +
Preference number: 4 (lower is better)
Translates to: TWRAQNMIPPPEIIHPCCLGSSP*MDSSSN
Trigger: GTTCGATGACGAGTCCATGCAAGGAGATGATCCCAA...GCAACACGGATGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTTGTCACTGCTGTCACTaGTGTCGCTGCTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: SCLGVVYSHYLSCFQRSPCHCCH*CRCCHY
Trigger: GTAGTGACAGCAGCGACAGCAGTGACAGCAGTGACA...AGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ACGATGAGTTTTCTACCCATGGCTTTAGTGATCACAACCTCGATGAGTGGGTGTTGCTGCTGCTGTCACTaGTGTCACTACTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: TMSFLPMALVITTSMSGCCCCCH*CHYCHC
Trigger: GCAGTGACAGTAGTGACAGCAGTGACAGCAGCAGCA...ACACCCACTCATCGAGGTTGTGATCACTAAAGCCATGGGTAGAAAACTCATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp AGCCCAAACAGGGTCCCACTCTTGTCACGCACAGCCTTACAACTCTTGATTAAATGTTGCTGCTGTCACTaGTGTCACTACTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SPNRVPLLSRTALQLLIKCCCCH*CHYCHC
Trigger: GCAGTGACAGTAGTGACAGCAGTGACAGCAGCAACA...TTTAATCAAGAGTTGTAAGGCTGTGCGTGACAAGAGTGGGACCCTGTTTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ACACAGTGGTACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATGTCACTGCTGTCACTaGTGTCACTACTGTCGCTAC +
Preference number: 4 (lower is better)
Translates to: TQWYMESSEYDPTSRNHPCHCCH*CHYCRY
Trigger: GTAGCGACAGTAGTGACAGCAGTGACAGCAGTGACA...TGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGTACCACTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTAGAGCCCAAACAGGGTGTCACTGCTGTCACTaGTGTCACTGCTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: VYSHYLSCFQRSPRAQTGCHCCH*CHCCHY
Trigger: GTAGTGACAGCAGTGACAGCAGTGACAGCAGTGACA...CCCTGTTTGGGCTCTAGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GACTTAGTACATATCCATCCCATGCAGAAATTTAACCGCATGTGTCAGATCCTGTGTCGCTGCTGTCGCTaGTGTCACTGCTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: DLVHIHPMQKFNRMCQILCRCCR*CHCCHC
Trigger: GCAGTGACAGCAGTGACAGCAGCGACAGCAGCGACA...CAGGATCTGACACATGCGGTTAAATTTCTGCATGGGATGGATATGTACTAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CCA 90 bp ACACAGTGGTACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCAATTCGTCGCTGCTCTTaGGATCATCTCCTTGCATGG +
Preference number: 4 (lower is better)
Translates to: TQWYMESSEYDPTSRNHPIRRCS*DHLLAW
Trigger: CCATGCAAGGAGATGATCCCAAGAGCAGCGACGAAT...TGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGTACCACTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR TCA 90 bp AAAGCACCCGCCATTCAAATCGAAGCTATGTGTCTTAGTGATTTCTTCAGTTCCCCCAGCCCTTCTCTCTaGGGCGTCGTTTCATGTGTA +
Preference number: 4 (lower is better)
Translates to: KAPAIQIEAMCLSDFFSSPSPSL*GVVSCV
Trigger: TACACATGAAACGACGCCTCAGAGAGAAGGGCTGGG...GGAACTGAAGAAATCACTAAGACACATAGCTTCGATTTGAATGGCGGGTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTAGAGCCCAAACAGGGCTGATTTCTCAGCAGTaGCTTGAGGCTTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: VYSHYLSCFQRSPRAQTGLISQQ*LEACQT
Trigger: AGTCTGACAAGCCTCAAGGCACTGCTGAGAAATCAG...CCCTGTTTGGGCTCTAGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ACACAGTGGTACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATGTCACTACTGTCACTaGTGTCACTGCTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: TQWYMESSEYDPTSRNHPCHYCH*CHCCHY
Trigger: GTAGTGACAGCAGTGACAGCAGTGACAGTAGTGACA...TGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGTACCACTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ACACAGTGGTACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATCTCACTGCTCTCACTaGTGTCACTACTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: TQWYMESSEYDPTSRNHPSHCSH*CHYCHY
Trigger: GTAGTGACAGTAGTGACAGCAGTGAGAGCAGTGAGA...TGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGTACCACTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTTGTCGCTACTGTCACTaGTGTCACTACTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SCLGVVYSHYLSCFQRSPCRYCH*CHYCCC
Trigger: GCAGCAACAGTAGTGACAGCAGTGACAGTAGCGACA...AGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ACACAGTGGTACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATGCCATTACCAGACTTaGTGTCACCATCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: TQWYMESSEYDPTSRNHPCHYQT*CHHHCC
Trigger: ACAGCAGTGATGGTGACAGCAAGTCTGGTAATGGCA...TGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGTACCACTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CCA 90 bp GTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTAGAGCCCAAACAGGGCTTGATGCTAGCTTCTaGAGGCTCATTTTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: VYSHYLSCFQRSPRAQTGLDASF*RLIFLD
Trigger: GTCCAGGAAAATGAGCCTCCAGAAGCTAGCATCAAG...CCCTGTTTGGGCTCTAGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CCA 90 bp CCGCATGTGTCAGATCCTGCCCAAGCCATCCTTGGGGCTCTTTTCTCATTCATTTGTATTCCAGCCTCATaGTTGGTGCTATTCTTGATG +
Preference number: 4 (lower is better)
Translates to: PHVSDPAQAILGALFSFICIPAS*LVLFLM
Trigger: CATCAAGAATAGCACCAACCATGAGGCTGGAATACA...AATGAATGAGAAAAGAGCCCCAAGGATGGCTTGGGCAGGATCTGACACATGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CCA 90 bp GTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTAGAGCCCAAACAGGGGATCATCTCCTTGCATaGACTCGTCATCGAACTCGT +
Preference number: 4 (lower is better)
Translates to: VYSHYLSCFQRSPRAQTGDHLLA*TRHRTR
Trigger: ACGAGTTCGATGACGAGTCCATGCAAGGAGATGATC...CCCTGTTTGGGCTCTAGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR TCA 90 bp ACACAGTGGTACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATCAGTTTCTATTCCCTaGTCTTGGCTCTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: TQWYMESSEYDPTSRNHPSVSIP*SWLFPE
Trigger: TTCTGGGAAGAGCCAAGATCAGGGAATAGAAACTGA...TGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGTACCACTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR TCA 90 bp TGGCGGGTTACTAGAGGCAGGTGCTTCATAAGTTACAGCAAACAAAGGAGAGTTACTGTCACTGCTGTCTaGTTTGCTCTCACTGTCACT +
Preference number: 4 (lower is better)
Translates to: WRVTRGRCFISYSKQRRVTVTAV*FALTVT
Trigger: AGTGACAGTGAGAGCAAATCAGACAGCAGTGACAGT...AACTCTCCTTTGTTTGCTGTAACTTATGAAGCACCTGCCTCTAGTAACCCGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GACTTAGTACATATCCATCCCATGCAGAAATTTAACCGCATGTGTCAGATCCTGTGTCACTACTGTCGCTaGTGTCACTGCTGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: DLVHIHPMQKFNRMCQILCHYCR*CHCCRH
Trigger: GTGACGACAGCAGTGACAGCAGCGACAGTAGTGACA...CAGGATCTGACACATGCGGTTAAATTTCTGCATGGGATGGATATGTACTAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TTCTTGAGACAATCCCAGTTCACACCTCCTGTCTTGGTGTGGTTTATTCTCATTTGTCACTGCTGTCACTaGTGTCACTACTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: FLRQSQFTPPVLVWFILICHCCH*CHYCRC
Trigger: GCAGCGACAGTAGTGACAGCAGTGACAGCAGTGACA...AATGAGAATAAACCACACCAAGACAGGAGGTGTGAACTGGGATTGTCTCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TCACACCTCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGTGTCACTACTACTGTTaGTGTCGCTGCTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SHLLSWCGLFSLPLLLSECHYYC*CRCCHC
Trigger: GCAGTGACAGCAGCGACAGCAACAGTAGTAGTGACA...CTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGAGGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CAGTTTACGATGAGTTTTCTACCCATGGCTTTAGTGATCACAACCTCGATGAGTTGTCGCTGCTGTCACTaGTGTCACTACTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: QFTMSFLPMALVITTSMSCRCCH*CHYCHC
Trigger: GCAGTGACAGTAGTGACAGCAGTGACAGCAGCGACA...ACTCATCGAGGTTGTGATCACTAAAGCCATGGGTAGAAAACTCATCGTAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ACGATGAGTTTTCTACCCATGGCTTTAGTGATCACAACCTCGATGAGTGGGTGTCAGAACTGCTATCCTTaGTGTCACTGTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: TMSFLPMALVITTSMSGCQNCYP*CHCHCC
Trigger: ACAGCAGTGACAGTGACAGCAAGGATAGCAGTTCTG...ACACCCACTCATCGAGGTTGTGATCACTAAAGCCATGGGTAGAAAACTCATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTAGAGCCCAAACAGGGTGTTGCTGTCACTGTTaGTGTCACTGTTGCCATTAC +
Preference number: 4 (lower is better)
Translates to: VYSHYLSCFQRSPRAQTGCCCHC*CHCCHY
Trigger: GTAATGGCAACAGTGACAGCAACAGTGACAGCAACA...CCCTGTTTGGGCTCTAGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TGGCGGGTTACTAGAGGCAGGTGCTTCATAAGTTACAGCAAACAAAGGAGAGTTTGTCACTGTCACTGTTaGTGTCACTGTTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: WRVTRGRCFISYSKQRRVCHCHC*CHCCCH
Trigger: GTGACAGCAACAGTGACAGCAACAGTGACAGTGACA...AACTCTCCTTTGTTTGCTGTAACTTATGAAGCACCTGCCTCTAGTAACCCGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTAGTGGTTACTGTCACTaGCTTCACTGTCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: SCLGVVYSHYLSCFQRSPSGYCH*LHCHCH
Trigger: GTGACAGTGACAGTGAAGGCAGTGACAGTAACCACT...AGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CCA 90 bp TCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTAGACTCCCCTTGCTTTaGGCTATTCCTTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SCLGVVYSHYLSCFQRSPRLPLL*AIPFVQ
Trigger: CTGGACAAAAGGAATAGCCCAAAGCAAGGGGAGTCT...AGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CCA 90 bp TCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTTCACTGCTGTTGTCATaGTCACTGCTGTCAGATTCG +
Preference number: 4 (lower is better)
Translates to: SCLGVVYSHYLSCFQRSPSLLLS*SLLSDS
Trigger: CGAATCTGACAGCAGTGACCATGACAACAGCAGTGA...AGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GACTTAGTACATATCCATCCCATGCAGAAATTTAACCGCATGTGTCAGATCCTGTCCTCGCTAAGTACCTaGTCTCCTATCTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: DLVHIHPMQKFNRMCQILSSLST*SPISLP
Trigger: TGGCAGTGAGATAGGAGAGCAGGTACTTAGCGAGGA...CAGGATCTGACACATGCGGTTAAATTTCTGCATGGGATGGATATGTACTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp AAAGCACCCGCCATTCAAATCGAAGCTATGTGTCTTAGTGATTTCTTCAGTTCCGCTCCTGATGCCATTTaGTGTGCTGTTCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KAPAIQIEAMCLSDFFSSAPDAI*CAVLSS
Trigger: AGAGGAGAGAACAGCACAGCAAATGGCATCAGGAGC...GGAACTGAAGAAATCACTAAGACACATAGCTTCGATTTGAATGGCGGGTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp CAGTTTACGATGAGTTTTCTACCCATGGCTTTAGTGATCACAACCTCGATGAGTTGCTCTCACTGTCACTaGTGTTGTCATGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: QFTMSFLPMALVITTSMSCSHCH*CCHGHC
Trigger: GCAGTGACCATGACAACAGCAGTGACAGTGAGAGCA...ACTCATCGAGGTTGTGATCACTAAAGCCATGGGTAGAAAACTCATCGTAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ATTCGAAGAAAACTAATAACACAGTGGTACATGGAGAGCTCAGAATATGATCCCTGTCGCTGCTGCTGCTaGTGTCACTGCTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: IRRKLITQWYMESSEYDPCRCCC*CHCCHY
Trigger: GTAGTGACAGCAGTGACAGCAGCAGCAGCAGCGACA...GGGATCATATTCTGAGCTCTCCATGTACCACTGTGTTATTAGTTTTCTTCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ATTCGAAGAAAACTAATAACACAGTGGTACATGGAGAGCTCAGAATATGATCCCTGTCACTGCTGTCACTaGTGTTGCTGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: IRRKLITQWYMESSEYDPCHCCH*CCCCRC
Trigger: GCAGCGACAGCAGCAACAGCAGTGACAGCAGTGACA...GGGATCATATTCTGAGCTCTCCATGTACCACTGTGTTATTAGTTTTCTTCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CCA 90 bp ACGATGAGTTTTCTACCCATGGCTTTAGTGATCACAACCTCGATGAGTGGGTGTTCCAGCTCCACTCCTTaGTGTCCATTGCTATCTTTA +
Preference number: 4 (lower is better)
Translates to: TMSFLPMALVITTSMSGCSSSTP*CPLLSL
Trigger: TAAAGATAGCAATGGACACCAAGGAGTGGAGCTGGA...ACACCCACTCATCGAGGTTGTGATCACTAAAGCCATGGGTAGAAAACTCATCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TTCTTGAGACAATCCCAGTTCACACCTCCTGTCTTGGTGTGGTTTATTCTCATTCATCACTATTGCTGCTaGTACCTATCCTGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FLRQSQFTPPVLVWFILIHHYCC*YLSCCV
Trigger: GACACAGCAGGATAGGTAGCAGCAGCAATAGTGATG...AATGAGAATAAACCACACCAAGACAGGAGGTGTGAACTGGGATTGTCTCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ATTCGAAGAAAACTAATAACACAGTGGTACATGGAGAGCTCAGAATATGATCCCTACTGCTGCTGTCGCTaGTGTCACTGCTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: IRRKLITQWYMESSEYDPYCCCR*CHCCHY
Trigger: GTAGTGACAGCAGTGACAGCAGCGACAGCAGCAGTA...GGGATCATATTCTGAGCTCTCCATGTACCACTGTGTTATTAGTTTTCTTCGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TTTACATTTCTTACACAGTTTACGATGAGTTTTCTACCCATGGCTTTAGTGATCTGCTGCTGTCGCTGCTaGTGCTGTCACTGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: FTFLTQFTMSFLPMALVICCCRC*CCHCCH
Trigger: GTGACAGCAGTGACAGCAGCAGCAGCGACAGCAGCA...GATCACTAAAGCCATGGGTAGAAAACTCATCGTAAACTGTGTAAGAAATGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp AAAGCACCCGCCATTCAAATCGAAGCTATGTGTCTTAGTGATTTCTTCAGTTCCTGTCACTACTGTCACTaGTGTCACTACTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: KAPAIQIEAMCLSDFFSSCHYCH*CHYYCC
Trigger: GCAGCAGTAGTAGTGACAGCAGTGACAGTAGTGACA...GGAACTGAAGAAATCACTAAGACACATAGCTTCGATTTGAATGGCGGGTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TTTACATTTCTTACACAGTTTACGATGAGTTTTCTACCCATGGCTTTAGTGATCTGTCACTGCTGTTGCTaGTGTCGCTGCTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: FTFLTQFTMSFLPMALVICHCCC*CRCSHC
Trigger: GCAGTGAGAGCAGCGACAGCAGCAACAGCAGTGACA...GATCACTAAAGCCATGGGTAGAAAACTCATCGTAAACTGTGTAAGAAATGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ATTCGAAGAAAACTAATAACACAGTGGTACATGGAGAGCTCAGAATATGATCCCTGTCACTACTGTTGCTaGTGTCACTACTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: IRRKLITQWYMESSEYDPCHYCC*CHYCRC
Trigger: GCAGCGACAGTAGTGACAGCAGCAACAGTAGTGACA...GGGATCATATTCTGAGCTCTCCATGTACCACTGTGTTATTAGTTTTCTTCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ATTCGAAGAAAACTAATAACACAGTGGTACATGGAGAGCTCAGAATATGATCCCTGTCACTACTGTCACTaGTGTCACTACTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: IRRKLITQWYMESSEYDPCHYCH*CHYCRC
Trigger: GCAGCGACAGTAGTGACAGCAGTGACAGTAGTGACA...GGGATCATATTCTGAGCTCTCCATGTACCACTGTGTTATTAGTTTTCTTCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TTTACATTTCTTACACAGTTTACGATGAGTTTTCTACCCATGGCTTTAGTGATCTGTCGCTGCTGTCACTaGTGTCACTGCTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: FTFLTQFTMSFLPMALVICRCCH*CHCCHC
Trigger: GCAGTGACAGCAGTGACAGCAGTGACAGCAGCGACA...GATCACTAAAGCCATGGGTAGAAAACTCATCGTAAACTGTGTAAGAAATGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CAA 72 bp GTTTTCTTGAGACAATCCCAGTTCACACCTCCTGTCTaGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VFLRQSQFTPPV*VWFILITSLAF
Trigger: GAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGAGGTGTGAACTGGGATTGTCTCAAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
3UTR CAA 72 bp CAGGTGCTTCATAAGTTACAGCAAACAAAGGAGAGTTaGGGGTCTAGTAGAAGGCAAAGACTGAACCTTTAC +
Preference number: 4 (lower is better)
Translates to: QVLHKLQQTKES*GSSRRQRLNLY
Trigger: GTAAAGGTTCAGTCTTTGCCTTCTACTAGACCCCAAACTCTCCTTTGTTTGCTGTAACTTATGAAGCACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp TTTACATTTCTTACACAGTTTACGATGAGTTTTCTACCCATGGCTTTAGTGATCTCCATCTCCTGCTTCTaGACCCTCACCATCACCAGA +
Preference number: 4 (lower is better)
Translates to: FTFLTQFTMSFLPMALVISISCF*TLTITR
Trigger: TCTGGTGATGGTGAGGGTGCAGAAGCAGGAGATGGA...GATCACTAAAGCCATGGGTAGAAAACTCATCGTAAACTGTGTAAGAAATGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp ATTCGAAGAAAACTAATAACACAGTGGTACATGGAGAGCTCAGAATATGATCCCTGTCACTACTGTCACTaGTGTCACTACTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: IRRKLITQWYMESSEYDPCHYCH*CHYCHC
Trigger: GCAGTGACAGTAGTGACAGCAGTGACAGTAGTGACA...GGGATCATATTCTGAGCTCTCCATGTACCACTGTGTTATTAGTTTTCTTCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR TCA 90 bp GACTTAGTACATATCCATCCCATGCAGAAATTTAACCGCATGTGTCAGATCCTGTTTACTAAAATGGGCTaGGTAGGAAAATCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: DLVHIHPMQKFNRMCQILFTKMG*VGKSFP
Trigger: AGGGAAGGATTTTCCTACTCAGCCCATTTTAGTAAA...CAGGATCTGACACATGCGGTTAAATTTCTGCATGGGATGGATATGTACTAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR GCA 90 bp GACTTAGTACATATCCATCCCATGCAGAAATTTAACCGCATGTGTCAGATCCTGAATGGCCCAGGCAGTTaGCCAAATGCATATATATAT +
Preference number: 4 (lower is better)
Translates to: DLVHIHPMQKFNRMCQILNGPGS*PNAYIY
Trigger: ATATATATATGCATTTGGGCAACTGCCTGGGCCATT...CAGGATCTGACACATGCGGTTAAATTTCTGCATGGGATGGATATGTACTAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp TTCAGAGGAGCCCTAGAGCCCAAACAGGGTCCCACTCTTGTCACGCACAGCCTTCATCTTCCCCGATGCTaGGTGTCACCTCAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: FRGALEPKQGPTLVTHSLHLPRC*VSPQSP
Trigger: AGGGGACTGAGGTGACACCAAGCATCGGGGAAGATG...AAGGCTGTGCGTGACAAGAGTGGGACCCTGTTTGGGCTCTAGGGCTCCTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp AGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACATCTCTTTGGGGCTGAGCTTTaGGTTGTCCTGCGTTGCCTG +
Preference number: 5 (lower is better)
Translates to: SSAPLPMSSMGSTQSAHLFGAEL*VVLRCL
Trigger: CAGGCAACGCAGGACAACCAAAAGCTCAGCCCCAAA...GAGATGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp AGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACATCTCCTGCTGTCGCTACTGTaGCTACTGTCACTGCTGTCG +
Preference number: 5 (lower is better)
Translates to: SSAPLPMSSMGSTQSAHLLLSLL*LLSLLS
Trigger: CGACAGCAGTGACAGTAGCAACAGTAGCGACAGCAG...GAGATGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS TCA 90 bp GCTGCTGCTACCTATCCTGCTGTGTCCCAGGTTACTGTGGGCAGCTaGTTTCTCAGCAGTGCCTTGAGGCTTGTCAGACTCCCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: AAATYPAVSQVTVGS*FLSSALRLVRLPLL
Trigger: AAGCAAGGGGAGTCTGACAAGCCTCAAGGCACTGCTGAGAAATCAGCTGCCCACAGTAACCTGGGACACAGCAGGATAGGTAGCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp CTGGAGCTCGGCTCCACTCCCTATGAGCTCCATGGGTTCCACACAGTCTGCACACAGACTCCCCTTGCTTaGGGCTATTCCTTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: LELGSTPYELHGFHTVCTQTPLA*GYSFCP
Trigger: TGGACAAAAGGAATAGCCCAAAGCAAGGGGAGTCTG...TGTGCAGACTGTGTGGAACCCATGGAGCTCATAGGGAGTGGAGCCGAGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp TTCAGAGGAGCCCTAGAGCCCAAACAGGGTCCCACTCTTGTCACGCACAGCCTTCTGCTGTCACTACTGTaGCTGCTGTCACTACTGTCG +
Preference number: 5 (lower is better)
Translates to: FRGALEPKQGPTLVTHSLLLSLL*LLSLLS
Trigger: CGACAGTAGTGACAGCAGCAACAGTAGTGACAGCAG...AAGGCTGTGCGTGACAAGAGTGGGACCCTGTTTGGGCTCTAGGGCTCCTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp GGTGGTACACCCAGATTCTCTCTGAGAGAGCTGGAGCTCGGCTCCACTCCCTATGTCCAGCTCCACTCCTaGGTGTCCATTGCTATCTTT +
Preference number: 5 (lower is better)
Translates to: GGTPRFSLRELELGSTPYVQLHS*VSIAIF
Trigger: AAAGATAGCAATGGACACCAAGGAGTGGAGCTGGAC...ATAGGGAGTGGAGCCGAGCTCCAGCTCTCTCAGAGAGAATCTGGGTGTACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp GTGATCACAACCTCGATGAGTGGGTGTGGCGGGTTACTAGAGGCAGGTGCTTCACTGCTGTCACTACTGTaGCTGCTGTCACTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: VITTSMSGCGGLLEAGASLLSLL*LLSLLS
Trigger: TGACAGCAGTGACAGCAGCAACAGTAGTGACAGCAG...TGAAGCACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS TCA 90 bp TGCTCTCTGCTTCCTCCGCATTTTCAACGATGCCTACCTGGCTCCTaGTGCCATTTGCTGTGCTGTTCTCTCCTCTCGCATGTACCCCAT +
Preference number: 5 (lower is better)
Translates to: CSLLPPHFQRCLPGS*CHLLCCSLLSHVPH
Trigger: ATGGGGTACATGCGAGAGGAGAGAACAGCACAGCAAATGGCATCAGGAGCCAGGTAGGCATCGTTGAAAATGCGGAGGAAGCAGAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS TCA 90 bp CTGTGTCCCAGGTTACTGTGGGCAGCTGATTTCTCAGCAGTGCCTTaGGGCTTGTCAGACTCCCCTTGCTTTGGGCTATTCCTTTTGTCC +
Preference number: 5 (lower is better)
Translates to: LCPRLLWAADFSAVP*GLSDSPCFGLFLLS
Trigger: GGACAAAAGGAATAGCCCAAAGCAAGGGGAGTCTGACAAGCCTCAAGGCACTGCTGAGAAATCAGCTGCCCACAGTAACCTGGGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 90 bp TGGACTCGTCATCGAACTCGTAACTGTCATGCCCATCACTATTGCTaGTGCTACCTATCCTGCTGTGTCCCAGGTTACTGTGGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: WTRHRTRNCHAHHYC*CYLSCCVPGYCGQL
Trigger: CAGCTGCCCACAGTAACCTGGGACACAGCAGGATAGGTAGCAGCAGCAATAGTGATGGGCATGACAGTTACGAGTTCGATGACGAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 90 bp GCATGGACTCGTCATCGAACTCGTAACTGTCATGCCCATCACTATTaGTGCTGCTACCTATCCTGCTGTGTCCCAGGTTACTGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: AWTRHRTRNCHAHHY*CCYLSCCVPGYCGQ
Trigger: CTGCCCACAGTAACCTGGGACACAGCAGGATAGGTAGCAGCAGCAATAGTGATGGGCATGACAGTTACGAGTTCGATGACGAGTCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CCA 90 bp TGGACACTGCTCTCTGCTTCCTCCGCATTTTCAACGATGCCTACCTaGCTCCTGATGCCATTTGCTGTGCTGTTCTCTCCTCTCGCATGT +
Preference number: 5 (lower is better)
Translates to: WTLLSASSAFSTMPT*LLMPFAVLFSPLAC
Trigger: ACATGCGAGAGGAGAGAACAGCACAGCAAATGGCATCAGGAGCCAGGTAGGCATCGTTGAAAATGCGGAGGAAGCAGAGAGCAGTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp GTGATCACAACCTCGATGAGTGGGTGTGGCGGGTTACTAGAGGCAGGTGCTTCATCATGCCCATCACTATaGCTGCTGCTACCTATCCTG +
Preference number: 5 (lower is better)
Translates to: VITTSMSGCGGLLEAGASSCPSL*LLLPIL
Trigger: CAGGATAGGTAGCAGCAGCAATAGTGATGGGCATGA...TGAAGCACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp GCTTTAGTGATCACAACCTCGATGAGTGGGTGTGGCGGGTTACTAGAGGCAGGTGATTCGTCGCTGCTCTaGGGATCATCTCCTTGCATG +
Preference number: 5 (lower is better)
Translates to: ALVITTSMSGCGGLLEAGDSSLL*GSSPCM
Trigger: CATGCAAGGAGATGATCCCAAGAGCAGCGACGAATC...ACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATCACTAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp TGTACCAAAGGTGGTACACCCAGATTCTCTCTGAGAGAGCTGGAGCTCGGCTCCTCACTGTCACTGCTGTaGTCATGGTCACTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: CTKGGTPRFSLRELELGSSLSLL*SWSLLS
Trigger: TGACAGCAGTGACCATGACAACAGCAGTGACAGTGA...GGAGCCGAGCTCCAGCTCTCTCAGAGAGAATCTGGGTGTACCACCTTTGGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS TCA 90 bp AGTTTCTATTCCCTGATCTTGGCTCTTCCCAGAAGGACATGCTTCTaGCTGGCTGATGATCCCACCCTCTGCATCTCGGGTGTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: SFYSLILALPRRTCF*LADDPTLCISGVFG
Trigger: CCCAAAGACACCCGAGATGCAGAGGGTGGGATCATCAGCCAGTCAGAAGCATGTCCTTCTGGGAAGAGCCAAGATCAGGGAATAGAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 90 bp TTCCTCCGCATTTTCAACGATGCCTACCTGGCTCCTGATGCCATTTaGTGTGCTGTTCTCTCCTCTCGCATGTACCCCATCATGACCGTA +
Preference number: 5 (lower is better)
Translates to: FLRIFNDAYLAPDAI*CAVLSSRMYPIMTV
Trigger: TACGGTCATGATGGGGTACATGCGAGAGGAGAGAACAGCACAGCAAATGGCATCAGGAGCCAGGTAGGCATCGTTGAAAATGCGGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp GGTGGTACACCCAGATTCTCTCTGAGAGAGCTGGAGCTCGGCTCCACTCCCTATATTCCAGCCTCATGGTaGGTGCTATTCTTGATGCTA +
Preference number: 5 (lower is better)
Translates to: GGTPRFSLRELELGSTPYIPASW*VLFLML
Trigger: TAGCATCAAGAATAGCACCAACCATGAGGCTGGAAT...ATAGGGAGTGGAGCCGAGCTCCAGCTCTCTCAGAGAGAATCTGGGTGTACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp GCTTTAGTGATCACAACCTCGATGAGTGGGTGTGGCGGGTTACTAGAGGCAGGTCTGCTGTTGTCTCCATaGTGTCCATTTGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: ALVITTSMSGCGGLLEAGLLLSP*CPFGKP
Trigger: AGGCTTCCCAAATGGACACAATGGAGACAACAGCAG...ACCTGCCTCTAGTAACCCGCCACACCCACTCATCGAGGTTGTGATCACTAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 90 bp ACTCGTCATCGAACTCGTAACTGTCATGCCCATCACTATTGCTGCTaGTACCTATCCTGCTGTGTCCCAGGTTACTGTGGGCAGCTGATT +
Preference number: 5 (lower is better)
Translates to: TRHRTRNCHAHHYCC*YLSCCVPGYCGQLI
Trigger: AATCAGCTGCCCACAGTAACCTGGGACACAGCAGGATAGGTAGCAGCAGCAATAGTGATGGGCATGACAGTTACGAGTTCGATGACGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 90 bp TGCTGTCTGATTTGCTCTCACTGTCACTGCTGTTGTCATGGTCACTaGTGTCAGATTCGTCCTTGTCCTCACTCTCGCTGTCACCATCAC +
Preference number: 5 (lower is better)
Translates to: CCLICSHCHCCCHGH*CQIRPCPHSRCHHH
Trigger: GTGATGGTGACAGCGAGAGTGAGGACAAGGACGAATCTGACAGCAGTGACCATGACAACAGCAGTGACAGTGAGAGCAAATCAGACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 90 bp TGTCACTACTGTCGCTGCTGTCACTGCTGTCGTCACTACTGTCACTaGTGTCTGATTTGCTCTCACTGTCACTGCTGTTGTCATGGTCAC +
Preference number: 5 (lower is better)
Translates to: CHYCRCCHCCRHYCH*CLICSHCHCCCHGH
Trigger: GTGACCATGACAACAGCAGTGACAGTGAGAGCAAATCAGACAGCAGTGACAGTAGTGACGACAGCAGTGACAGCAGCGACAGTAGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CCA 90 bp CTGTCACTGCTGTCTGATTTGCTCTCACTGTCACTGCTGTTGTCATaGTCACTGCTGTCAGATTCGTCCTTGTCCTCACTCTCGCTGTCA +
Preference number: 5 (lower is better)
Translates to: LSLLSDLLSLSLLLS*SLLSDSSLSSLSLS
Trigger: TGACAGCGAGAGTGAGGACAAGGACGAATCTGACAGCAGTGACCATGACAACAGCAGTGACAGTGAGAGCAAATCAGACAGCAGTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 90 bp GCGTTGCCTGGGTACTGTCGCCTTCTTCAACACCGTTTTCCTCACTaGTGTTGTCTCCATTGTGTCCATTTGGGAAGCCTTCTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: ALPGYCRLLQHRFPH*CCLHCVHLGSLLVL
Trigger: AAGAACAAGAAGGCTTCCCAAATGGACACAATGGAGACAACAGCAGTGAGGAAAACGGTGTTGAAGAAGGCGACAGTACCCAGGCAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 90 bp TGTCGTCACTACTGTCACTGCTGTCTGATTTGCTCTCACTGTCACTaGTGTTGTCATGGTCACTGCTGTCAGATTCGTCCTTGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: CRHYCHCCLICSHCH*CCHGHCCQIRPCPH
Trigger: GTGAGGACAAGGACGAATCTGACAGCAGTGACCATGACAACAGCAGTGACAGTGAGAGCAAATCAGACAGCAGTGACAGTAGTGACGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 90 bp CACTGTTGCTGTCACTGTTGCTGTCACTGTTGCCATTACCAGACTTaGTGTCACCATCACTGCTGTCAGAACTGCTATCCTTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: HCCCHCCCHCCHYQT*CHHHCCQNCYPCCH
Trigger: GTGACAGCAAGGATAGCAGTTCTGACAGCAGTGATGGTGACAGCAAGTCTGGTAATGGCAACAGTGACAGCAACAGTGACAGCAACAGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CCA 90 bp TGGTTGGTGCTATTCTTGATGCTAGCTTCTGGAGGCTCATTTTCCTaGACAAGGGTCGCATCTCCATTCTGGCTTACATCACTAGCACCT +
Preference number: 5 (lower is better)
Translates to: WLVLFLMLASGGSFS*TRVASPFWLTSLAP
Trigger: AGGTGCTAGTGATGTAAGCCAGAATGGAGATGCGACCCTTGTCCAGGAAAATGAGCCTCCAGAAGCTAGCATCAAGAATAGCACCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp GACTTAGTACATATCCATCCCATGCAGAAATTTAACCGCATGTGTCAGATCCTGCTGCTGTCACTGCTGTaGCTGCTGTCGCTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: DLVHIHPMQKFNRMCQILLLSLL*LLSLLS
Trigger: TGAGAGCAGCGACAGCAGCAACAGCAGTGACAGCAG...CAGGATCTGACACATGCGGTTAAATTTCTGCATGGGATGGATATGTACTAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS TCA 90 bp ATGCCATTTGCTGTGCTGTTCTCTCCTCTCGCATGTACCCCATCATaGCCGTATGTTTCTATGTCATTGTGTTCTTCAGCAGTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: MPFAVLFSPLACTPS*PYVSMSLCSSAVFP
Trigger: GGGGAACACTGCTGAAGAACACAATGACATAGAAACATACGGTCATGATGGGGTACATGCGAGAGGAGAGAACAGCACAGCAAATGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp ACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATCCGTGTTGCGAATGGCCCAGGCAGTaGCCCAAATGCATATATATA +
Preference number: 5 (lower is better)
Translates to: TWRAQNMIPPPEIIHPCCEWPRQ*PKCIYI
Trigger: TATATATATGCATTTGGGCAACTGCCTGGGCCATTC...GCAACACGGATGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp TGGCGGGTTACTAGAGGCAGGTGCTTCATAAGTTACAGCAAACAAAGGAGAGTTCTTGGGATCATCTCCTaGCATGGACTCGTCATCGAA +
Preference number: 5 (lower is better)
Translates to: WRVTRGRCFISYSKQRRVLGIIS*HGLVIE
Trigger: TTCGATGACGAGTCCATGCAAGGAGATGATCCCAAG...AACTCTCCTTTGTTTGCTGTAACTTATGAAGCACCTGCCTCTAGTAACCCGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp TGTACCAAAGGTGGTACACCCAGATTCTCTCTGAGAGAGCTGGAGCTCGGCTCCCATTGTCATCATCACTaGATTCATCAGATGTGTAAG +
Preference number: 5 (lower is better)
Translates to: CTKGGTPRFSLRELELGSHCHHH*IHQMCK
Trigger: CTTACACATCTGATGAATCAAGTGATGATGACAATG...GGAGCCGAGCTCCAGCTCTCTCAGAGAGAATCTGGGTGTACCACCTTTGGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp ACGATGAGTTTTCTACCCATGGCTTTAGTGATCACAACCTCGATGAGTGGGTGTTCACTGCTGTCTGATTaGCTCTCACTGTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: TMSFLPMALVITTSMSGCSLLSD*LSLSLL
Trigger: CAGCAGTGACAGTGAGAGCAAATCAGACAGCAGTGA...ACACCCACTCATCGAGGTTGTGATCACTAAAGCCATGGGTAGAAAACTCATCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp ACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATCCGTGTTGCTTTTCCTCACTGCTGTaGTCTCCATTGTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: TWRAQNMIPPPEIIHPCCFSSLL*SPLCPF
Trigger: AAATGGACACAATGGAGACAACAGCAGTGAGGAAAA...GCAACACGGATGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS TCA 90 bp TGGGAAGCCTTCTTGTTCTTTAGAATCATCATCTTCAGTACTAACTaGACTCTGACCTCTGTGGTCAGTGTTTCCCCCATGAGATTGGCC +
Preference number: 5 (lower is better)
Translates to: WEAFLFFRIIIFSTN*TLTSVVSVSPMRLA
Trigger: GGCCAATCTCATGGGGGAAACACTGACCACAGAGGTCAGAGTTCAGTTAGTACTGAAGATGATGATTCTAAAGAACAAGAAGGCTTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp GACTTAGTACATATCCATCCCATGCAGAAATTTAACCGCATGTGTCAGATCCTGTCAGAACTGCTATCCTaGCTGTCACTGTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: DLVHIHPMQKFNRMCQILSELLS*LSLSLL
Trigger: CAGCAGTGACAGTGACAGCAAGGATAGCAGTTCTGA...CAGGATCTGACACATGCGGTTAAATTTCTGCATGGGATGGATATGTACTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp TCACACCTCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGCTGTTGCTGTCACTGTaGCTGTCACTGTTGCCATTA +
Preference number: 5 (lower is better)
Translates to: SHLLSWCGLFSLPLLLSELLLSL*LSLLPL
Trigger: TAATGGCAACAGTGACAGCAACAGTGACAGCAACAG...CTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGAGGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS TCA 90 bp ATAATACTTTTGTTGCCTTTGTTGGGACCTTCAGTTTCTATTCCCTaGTCTTGGCTCTTCCCAGAAGGACATGCTTCTGACTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: IILLLPLLGPSVSIP*SWLFPEGHASDWLM
Trigger: CATCAGCCAGTCAGAAGCATGTCCTTCTGGGAAGAGCCAAGATCAGGGAATAGAAACTGAAGGTCCCAACAAAGGCAACAAAAGTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp ACACAGTGGTACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCAATACTTTTGTTGCCTTaGTTGGGACCTTCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: TQWYMESSEYDPTSRNHPILLLP*LGPSVS
Trigger: AGAAACTGAAGGTCCCAACAAAGGCAACAAAAGTAT...TGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGTACCACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp ACACAGTGGTACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCATGTGAGTCACTGTCATaGTCATCATCACTTGATTCA +
Preference number: 5 (lower is better)
Translates to: TQWYMESSEYDPTSRNHPCESLS*SSSLDS
Trigger: TGAATCAAGTGATGATGACAATGACAGTGACTCACA...TGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGTACCACTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp ACACAGTGGTACATGGAGAGCTCAGAATATGATCCCACCTCCCGAAATCATCCAATTTGGGAAGCCTTCTaGTTCTTTAGAATCATCATC +
Preference number: 5 (lower is better)
Translates to: TQWYMESSEYDPTSRNHPIWEAF*FFRIII
Trigger: GATGATGATTCTAAAGAACAAGAAGGCTTCCCAAAT...TGGATGATTTCGGGAGGTGGGATCATATTCTGAGCTCTCCATGTACCACTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp AAAGCACCCGCCATTCAAATCGAAGCTATGTGTCTTAGTGATTTCTTCAGTTCCACTCCTTGGTGTCCATaGCTATCTTTACTTCCACTG +
Preference number: 5 (lower is better)
Translates to: KAPAIQIEAMCLSDFFSSTPWCP*LSLLPL
Trigger: CAGTGGAAGTAAAGATAGCAATGGACACCAAGGAGT...GGAACTGAAGAAATCACTAAGACACATAGCTTCGATTTGAATGGCGGGTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp ATTCGAAGAAAACTAATAACACAGTGGTACATGGAGAGCTCAGAATATGATCCCCTGTTGCTGTCACTGTaGCCATTACCAGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: IRRKLITQWYMESSEYDPLLLSL*PLPDLL
Trigger: CAGCAAGTCTGGTAATGGCAACAGTGACAGCAACAG...GGGATCATATTCTGAGCTCTCCATGTACCACTGTGTTATTAGTTTTCTTCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp TCCTGTCTTGGTGTGGTTTATTCTCATTACCTCTCTTGCTTTCAGAGGAGCCCTGTAATAATACTTTTGTaGCCTTTGTTGGGACCTTCA +
Preference number: 5 (lower is better)
Translates to: SCLGVVYSHYLSCFQRSPVIILL*PLLGPS
Trigger: TGAAGGTCCCAACAAAGGCAACAAAAGTATTATTAC...AGGGCTCCTCTGAAAGCAAGAGAGGTAATGAGAATAAACCACACCAAGACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CCA 90 bp TTCAACACCGTTTTCCTCACTGCTGTTGTCTCCATTGTGTCCATTTaGGAAGCCTTCTTGTTCTTTAGAATCATCATCTTCAGTACTAAC +
Preference number: 5 (lower is better)
Translates to: FNTVFLTAVVSIVSI*EAFLFFRIIIFSTN
Trigger: GTTAGTACTGAAGATGATGATTCTAAAGAACAAGAAGGCTTCCCAAATGGACACAATGGAGACAACAGCAGTGAGGAAAACGGTGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp TTCTTGAGACAATCCCAGTTCACACCTCCTGTCTTGGTGTGGTTTATTCTCATTTATGTTTCTATGTCATaGTGTTCTTCAGCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: FLRQSQFTPPVLVWFILIYVSMS*CSSAVF
Trigger: GAACACTGCTGAAGAACACAATGACATAGAAACATA...AATGAGAATAAACCACACCAAGACAGGAGGTGTGAACTGGGATTGTCTCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS-3UTR CAA 90 bp AAAGCACCCGCCATTCAAATCGAAGCTATGTGTCTTAGTGATTTCTTCAGTTCCTTGGTAATAATACTTTaGTTGCCTTTGTTGGGACCT +
Preference number: 5 (lower is better)
Translates to: KAPAIQIEAMCLSDFFSSLVIIL*LPLLGP
Trigger: AGGTCCCAACAAAGGCAACAAAAGTATTATTACCAA...GGAACTGAAGAAATCACTAAGACACATAGCTTCGATTTGAATGGCGGGTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CCA 72 bp CCCTCTGCATCTCGGGTGTCTTTGGGGCTGAGCTTTTaGTTGTCCTGCGTTGCCTGGGTACTGTCGCCTTCT +
Preference number: 6 (lower is better)
Translates to: PSASRVSLGLSF*LSCVAWVLSPS
Trigger: AGAAGGCGACAGTACCCAGGCAACGCAGGACAACCAAAAGCTCAGCCCCAAAGACACCCGAGATGCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 72 bp ACCCTCTGCATCTCGGGTGTCTTTGGGGCTGAGCTTTaGGTTGTCCTGCGTTGCCTGGGTACTGTCGCCTTC +
Preference number: 6 (lower is better)
Translates to: TLCISGVFGAEL*VVLRCLGTVAF
Trigger: GAAGGCGACAGTACCCAGGCAACGCAGGACAACCAAAAGCTCAGCCCCAAAGACACCCGAGATGCAGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS TCA 72 bp TCCCTGATCTTGGCTCTTCCCAGAAGGACATGCTTCTaGCTGGCTGATGATCCCACCCTCTGCATCTCGGGT +
Preference number: 6 (lower is better)
Translates to: SLILALPRRTCF*LADDPTLCISG
Trigger: ACCCGAGATGCAGAGGGTGGGATCATCAGCCAGTCAGAAGCATGTCCTTCTGGGAAGAGCCAAGATCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 72 bp GTTCCCGCTAGGACTCCCATCAGTATCATCCAAACCTaGATCTTCCCCGATGCTTGGTGTCACCTCAGTCCC +
Preference number: 6 (lower is better)
Translates to: VPARTPISIIQT*IFPDAWCHLSP
Trigger: GGGACTGAGGTGACACCAAGCATCGGGGAAGATGCAGGTTTGGATGATACTGATGGGAGTCCTAGCGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 72 bp TCCCATCAGTATCATCCAAACCTGCATCTTCCCCGATaGTTGGTGTCACCTCAGTCCCCTGGTTCTCACTCC +
Preference number: 6 (lower is better)
Translates to: SHQYHPNLHLPR*LVSPQSPGSHS
Trigger: GGAGTGAGAACCAGGGGACTGAGGTGACACCAAGCATCGGGGAAGATGCAGGTTTGGATGATACTGATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 90 bp GCAACCCCACTCCCGTGTATTCCAGCCTCATGGTTGGTGCTATTCTaGATGCTAGCTTCTGGAGGCTCATTTTCCTGGACAAGGGTCGCA +
Preference number: 6 (lower is better)
Translates to: ATPLPCIPASWLVLF*MLASGGSFSWTRVA
Trigger: TGCGACCCTTGTCCAGGAAAATGAGCCTCCAGAAGCTAGCATCAAGAATAGCACCAACCATGAGGCTGGAATACACGGGAGTGGGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS TCA 72 bp CTTCCTCCGCATTTTCAACGATGCCTACCTGGCTCCTaGTGCCATTTGCTGTGCTGTTCTCTCCTCTCGCAT +
Preference number: 6 (lower is better)
Translates to: LPPHFQRCLPGS*CHLLCCSLLSH
Trigger: ATGCGAGAGGAGAGAACAGCACAGCAAATGGCATCAGGAGCCAGGTAGGCATCGTTGAAAATGCGGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 72 bp CGAACTCGTAACTGTCATGCCCATCACTATTGCTGCTaGTACCTATCCTGCTGTGTCCCAGGTTACTGTGGG +
Preference number: 6 (lower is better)
Translates to: RTRNCHAHHYCC*YLSCCVPGYCG
Trigger: CCCACAGTAACCTGGGACACAGCAGGATAGGTAGCAGCAGCAATAGTGATGGGCATGACAGTTACGAGTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 72 bp TGCTGTCACCATCACTGCTGTCAGAACTGCTATCCTTaGTGTCACTGTCACTGCTGTCACTGCTGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: CCHHHCCQNCYP*CHCHCCHCCCC
Trigger: GCAGCAACAGCAGTGACAGCAGTGACAGTGACAGCAAGGATAGCAGTTCTGACAGCAGTGATGGTGACAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CCA 72 bp CTCGCTAAGTACCTGCTCTCCTATCTCACTGCCATCTaGGGAGTCGTTGCTGTTGCTAGTGGTGCTGTTGAT +
Preference number: 6 (lower is better)
Translates to: LAKYLLSYLTAI*GVVAVASGAVD
Trigger: ATCAACAGCACCACTAGCAACAGCAACGACTCCCCAGATGGCAGTGAGATAGGAGAGCAGGTACTTAGCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CCA 72 bp CTCTCTGCTTCCTCCGCATTTTCAACGATGCCTACCTaGCTCCTGATGCCATTTGCTGTGCTGTTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: LSASSAFSTMPT*LLMPFAVLFSP
Trigger: AGGAGAGAACAGCACAGCAAATGGCATCAGGAGCCAGGTAGGCATCGTTGAAAATGCGGAGGAAGCAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 72 bp GTAGCAACCCCACTCCCGTGTATTCCAGCCTCATGGTaGGTGCTATTCTTGATGCTAGCTTCTGGAGGCTCA +
Preference number: 6 (lower is better)
Translates to: VATPLPCIPASW*VLFLMLASGGS
Trigger: TGAGCCTCCAGAAGCTAGCATCAAGAATAGCACCAACCATGAGGCTGGAATACACGGGAGTGGGGTTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 72 bp TTTCTCAGCAGTGCCTTGAGGCTTGTCAGACTCCCCTaGCTTTGGGCTATTCCTTTTGTCCAGCTCCACTCC +
Preference number: 6 (lower is better)
Translates to: FLSSALRLVRLP*LWAIPFVQLHS
Trigger: GGAGTGGAGCTGGACAAAAGGAATAGCCCAAAGCAAGGGGAGTCTGACAAGCCTCAAGGCACTGCTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS TCA 72 bp TGGCTTACATCACTAGCACCTCCAGATTTTGTATTCTaGCCAGCCTGTCCGTGGACACTGCTCTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: WLTSLAPPDFVF*PACPWTLLSAS
Trigger: GGAAGCAGAGAGCAGTGTCCACGGACAGGCTGGTCAGAATACAAAATCTGGAGGTGCTAGTGATGTAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 72 bp ATTTTCAACGATGCCTACCTGGCTCCTGATGCCATTTaGTGTGCTGTTCTCTCCTCTCGCATGTACCCCATC +
Preference number: 6 (lower is better)
Translates to: IFNDAYLAPDAI*CAVLSSRMYPI
Trigger: GATGGGGTACATGCGAGAGGAGAGAACAGCACAGCAAATGGCATCAGGAGCCAGGTAGGCATCGTTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 72 bp CGTCATCGAACTCGTAACTGTCATGCCCATCACTATTaGTGCTGCTACCTATCCTGCTGTGTCCCAGGTTAC +
Preference number: 6 (lower is better)
Translates to: RHRTRNCHAHHY*CCYLSCCVPGY
Trigger: GTAACCTGGGACACAGCAGGATAGGTAGCAGCAGCAATAGTGATGGGCATGACAGTTACGAGTTCGATGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CCA 72 bp AGCCTCATGGTTGGTGCTATTCTTGATGCTAGCTTCTaGAGGCTCATTTTCCTGGACAAGGGTCGCATCTCC +
Preference number: 6 (lower is better)
Translates to: SLMVGAILDASF*RLIFLDKGRIS
Trigger: GGAGATGCGACCCTTGTCCAGGAAAATGAGCCTCCAGAAGCTAGCATCAAGAATAGCACCAACCATGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 72 bp GGCTTGTCAGACTCCCCTTGCTTTGGGCTATTCCTTTaGTCCAGCTCCACTCCTTGGTGTCCATTGCTATCT +
Preference number: 6 (lower is better)
Translates to: GLSDSPCFGLFL*SSSTPWCPLLS
Trigger: AGATAGCAATGGACACCAAGGAGTGGAGCTGGACAAAAGGAATAGCCCAAAGCAAGGGGAGTCTGACAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 90 bp GTTTCATGTGTAGCAACCCCACTCCCGTGTATTCCAGCCTCATGGTaGGTGCTATTCTTGATGCTAGCTTCTGGAGGCTCATTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: VSCVATPLPCIPASW*VLFLMLASGGSFSW
Trigger: CCAGGAAAATGAGCCTCCAGAAGCTAGCATCAAGAATAGCACCAACCATGAGGCTGGAATACACGGGAGTGGGGTTGCTACACATGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 90 bp TTCGTCACTTCCGTTAGATTCGTCGCTGCTCTTGGGATCATCTCCTaGCATGGACTCGTCATCGAACTCGTAACTGTCATGCCCATCACT +
Preference number: 6 (lower is better)
Translates to: FVTSVRFVAALGIIS*HGLVIELVTVMPIT
Trigger: AGTGATGGGCATGACAGTTACGAGTTCGATGACGAGTCCATGCAAGGAGATGATCCCAAGAGCAGCGACGAATCTAACGGAAGTGACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 90 bp TCACTACTGTCACTGCTGTCTGATTTGCTCTCACTGTCACTGCTGTaGTCATGGTCACTGCTGTCAGATTCGTCCTTGTCCTCACTCTCG +
Preference number: 6 (lower is better)
Translates to: SLLSLLSDLLSLSLL*SWSLLSDSSLSSLS
Trigger: CGAGAGTGAGGACAAGGACGAATCTGACAGCAGTGACCATGACAACAGCAGTGACAGTGAGAGCAAATCAGACAGCAGTGACAGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 72 bp CAGATTTTGTATTCTGACCAGCCTGTCCGTGGACACTaGTCTCTGCTTCCTCCGCATTTTCAACGATGCCTA +
Preference number: 6 (lower is better)
Translates to: QILYSDQPVRGH*SLLPPHFQRCL
Trigger: TAGGCATCGTTGAAAATGCGGAGGAAGCAGAGAGCAGTGTCCACGGACAGGCTGGTCAGAATACAAAATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 72 bp GGGTACTGTCGCCTTCTTCAACACCGTTTTCCTCACTaGTGTTGTCTCCATTGTGTCCATTTGGGAAGCCTT +
Preference number: 6 (lower is better)
Translates to: GYCRLLQHRFPH*CCLHCVHLGSL
Trigger: AAGGCTTCCCAAATGGACACAATGGAGACAACAGCAGTGAGGAAAACGGTGTTGAAGAAGGCGACAGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 72 bp CATCGAACTCGTAACTGTCATGCCCATCACTATTGCTaGTGCTACCTATCCTGCTGTGTCCCAGGTTACTGT +
Preference number: 6 (lower is better)
Translates to: HRTRNCHAHHYC*CYLSCCVPGYC
Trigger: ACAGTAACCTGGGACACAGCAGGATAGGTAGCAGCAGCAATAGTGATGGGCATGACAGTTACGAGTTCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 72 bp ATTTGCTCTCACTGTCACTGCTGTTGTCATGGTCACTaGTGTCAGATTCGTCCTTGTCCTCACTCTCGCTGT +
Preference number: 6 (lower is better)
Translates to: ICSHCHCCCHGH*CQIRPCPHSRC
Trigger: ACAGCGAGAGTGAGGACAAGGACGAATCTGACAGCAGTGACCATGACAACAGCAGTGACAGTGAGAGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 72 bp CACTGTTGCCATTACCAGACTTGCTGTCACCATCACTaGTGTCAGAACTGCTATCCTTGCTGTCACTGTCAC +
Preference number: 6 (lower is better)
Translates to: HCCHYQTCCHHH*CQNCYPCCHCH
Trigger: GTGACAGTGACAGCAAGGATAGCAGTTCTGACAGCAGTGATGGTGACAGCAAGTCTGGTAATGGCAACAGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CCA 72 bp GAGTTTTCAACAATGTCTCTTTCCAGTGGTACTAACTaGGGAACCGGAATGGCCCAGGCAGTTGCCCAAATG +
Preference number: 6 (lower is better)
Translates to: EFSTMSLSSGTN*GTGMAQAVAQM
Trigger: CATTTGGGCAACTGCCTGGGCCATTCCGGTTCCCCAGTTAGTACCACTGGAAAGAGACATTGTTGAAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CCA 72 bp CTGTCTGATTTGCTCTCACTGTCACTGCTGTTGTCATaGTCACTGCTGTCAGATTCGTCCTTGTCCTCACTC +
Preference number: 6 (lower is better)
Translates to: LSDLLSLSLLLS*SLLSDSSLSSL
Trigger: GAGTGAGGACAAGGACGAATCTGACAGCAGTGACCATGACAACAGCAGTGACAGTGAGAGCAAATCAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 72 bp CTCCCGTGTATTCCAGCCTCATGGTTGGTGCTATTCTaGATGCTAGCTTCTGGAGGCTCATTTTCCTGGACA +
Preference number: 6 (lower is better)
Translates to: LPCIPASWLVLF*MLASGGSFSWT
Trigger: TGTCCAGGAAAATGAGCCTCCAGAAGCTAGCATCAAGAATAGCACCAACCATGAGGCTGGAATACACGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 72 bp TCCGTTAGATTCGTCGCTGCTCTTGGGATCATCTCCTaGCATGGACTCGTCATCGAACTCGTAACTGTCATG +
Preference number: 6 (lower is better)
Translates to: SVRFVAALGIIS*HGLVIELVTVM
Trigger: CATGACAGTTACGAGTTCGATGACGAGTCCATGCAAGGAGATGATCCCAAGAGCAGCGACGAATCTAACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 72 bp TCACTTTCGTCACTTCCGTTAGATTCGTCGCTGCTCTaGGGATCATCTCCTTGCATGGACTCGTCATCGAAC +
Preference number: 6 (lower is better)
Translates to: SLSSLPLDSSLL*GSSPCMDSSSN
Trigger: GTTCGATGACGAGTCCATGCAAGGAGATGATCCCAAGAGCAGCGACGAATCTAACGGAAGTGACGAAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 72 bp TCACTGCTGTCGTCACTACTGTCACTGCTGTCTGATTaGCTCTCACTGTCACTGCTGTTGTCATGGTCACTG +
Preference number: 6 (lower is better)
Translates to: SLLSSLLSLLSD*LSLSLLLSWSL
Trigger: CAGTGACCATGACAACAGCAGTGACAGTGAGAGCAAATCAGACAGCAGTGACAGTAGTGACGACAGCAGTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 90 bp TCGCTAAGTACCTGCTCTCCTATCTCACTGCCATCTGGGGAGTCGTaGCTGTTGCTAGTGGTGCTGTTGATAGATAACTCATTCTGTGCT +
Preference number: 6 (lower is better)
Translates to: SLSTCSPISLPSGES*LLLVVLLIDNSFCA
Trigger: AGCACAGAATGAGTTATCTATCAACAGCACCACTAGCAACAGCAACGACTCCCCAGATGGCAGTGAGATAGGAGAGCAGGTACTTAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 90 bp TCACTGTTGCTGTCACTGTTGCTGTCACTGTTGCCATTACCAGACTaGCTGTCACCATCACTGCTGTCAGAACTGCTATCCTTGCTGTCA +
Preference number: 6 (lower is better)
Translates to: SLLLSLLLSLLPLPD*LSPSLLSELLSLLS
Trigger: TGACAGCAAGGATAGCAGTTCTGACAGCAGTGATGGTGACAGCAAGTCTGGTAATGGCAACAGTGACAGCAACAGTGACAGCAACAGTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS GCA 72 bp TGTCACTGTTGCTGTCACTGTTGCCATTACCAGACTTaGTGTCACCATCACTGCTGTCAGAACTGCTATCCT +
Preference number: 6 (lower is better)
Translates to: CHCCCHCCHYQT*CHHHCCQNCYP
Trigger: AGGATAGCAGTTCTGACAGCAGTGATGGTGACAGCAAGTCTGGTAATGGCAACAGTGACAGCAACAGTGACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 72 bp CTGTCGCCTTCTTCAACACCGTTTTCCTCACTGCTGTaGTCTCCATTGTGTCCATTTGGGAAGCCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: LSPSSTPFSSLL*SPLCPFGKPSC
Trigger: ACAAGAAGGCTTCCCAAATGGACACAATGGAGACAACAGCAGTGAGGAAAACGGTGTTGAAGAAGGCGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 90 bp TATCGTCTTCTCCCGCATGTGAGTCACTGTCATTGTCATCATCACTaGATTCATCAGATGTGTAAGAAGCATCTCCACGGCTGCCACTCT +
Preference number: 6 (lower is better)
Translates to: YRLLPHVSHCHCHHH*IHQMCKKHLHGCHS
Trigger: AGAGTGGCAGCCGTGGAGATGCTTCTTACACATCTGATGAATCAAGTGATGATGACAATGACAGTGACTCACATGCGGGAGAAGACGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS TCA 72 bp TTGTTGCCTTTGTTGGGACCTTCAGTTTCTATTCCCTaGTCTTGGCTCTTCCCAGAAGGACATGCTTCTGAC +
Preference number: 6 (lower is better)
Translates to: LLPLLGPSVSIP*SWLFPEGHASD
Trigger: GTCAGAAGCATGTCCTTCTGGGAAGAGCCAAGATCAGGGAATAGAAACTGAAGGTCCCAACAAAGGCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CCA 72 bp GGCTCATTTTCCTGGACAAGGGTCGCATCTCCATTCTaGCTTACATCACTAGCACCTCCAGATTTTGTATTC +
Preference number: 6 (lower is better)
Translates to: GSFSWTRVASPF*LTSLAPPDFVF
Trigger: GAATACAAAATCTGGAGGTGCTAGTGATGTAAGCCAGAATGGAGATGCGACCCTTGTCCAGGAAAATGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CCA 72 bp CTATTCTTGATGCTAGCTTCTGGAGGCTCATTTTCCTaGACAAGGGTCGCATCTCCATTCTGGCTTACATCA +
Preference number: 6 (lower is better)
Translates to: LFLMLASGGSFS*TRVASPFWLTS
Trigger: TGATGTAAGCCAGAATGGAGATGCGACCCTTGTCCAGGAAAATGAGCCTCCAGAAGCTAGCATCAAGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 72 bp TCTCCTATCTCACTGCCATCTGGGGAGTCGTTGCTGTaGCTAGTGGTGCTGTTGATAGATAACTCATTCTGT +
Preference number: 6 (lower is better)
Translates to: SPISLPSGESLL*LVVLLIDNSFC
Trigger: ACAGAATGAGTTATCTATCAACAGCACCACTAGCAACAGCAACGACTCCCCAGATGGCAGTGAGATAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 90 bp CTGTCGCCTTCTTCAACACCGTTTTCCTCACTGCTGTTGTCTCCATaGTGTCCATTTGGGAAGCCTTCTTGTTCTTTAGAATCATCATCT +
Preference number: 6 (lower is better)
Translates to: LSPSSTPFSSLLLSP*CPFGKPSCSLESSS
Trigger: AGATGATGATTCTAAAGAACAAGAAGGCTTCCCAAATGGACACAATGGAGACAACAGCAGTGAGGAAAACGGTGTTGAAGAAGGCGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 72 bp CTATTCCTTTTGTCCAGCTCCACTCCTTGGTGTCCATaGCTATCTTTACTTCCACTGAGTTTCCCAGATTCT +
Preference number: 6 (lower is better)
Translates to: LFLLSSSTPWCP*LSLLPLSFPDS
Trigger: AGAATCTGGGAAACTCAGTGGAAGTAAAGATAGCAATGGACACCAAGGAGTGGAGCTGGACAAAAGGAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 72 bp TTGCTTTGGGCTATTCCTTTTGTCCAGCTCCACTCCTaGGTGTCCATTGCTATCTTTACTTCCACTGAGTTT +
Preference number: 6 (lower is better)
Translates to: LLWAIPFVQLHS*VSIAIFTSTEF
Trigger: AAACTCAGTGGAAGTAAAGATAGCAATGGACACCAAGGAGTGGAGCTGGACAAAAGGAATAGCCCAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 90 bp TGCTTTGGGCTATTCCTTTTGTCCAGCTCCACTCCTTGGTGTCCATaGCTATCTTTACTTCCACTGAGTTTCCCAGATTCTTTGGTAATA +
Preference number: 6 (lower is better)
Translates to: CFGLFLLSSSTPWCP*LSLLPLSFPDSLVI
Trigger: TATTACCAAAGAATCTGGGAAACTCAGTGGAAGTAAAGATAGCAATGGACACCAAGGAGTGGAGCTGGACAAAAGGAATAGCCCAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CCA 72 bp GTTTTCCTCACTGCTGTTGTCTCCATTGTGTCCATTTaGGAAGCCTTCTTGTTCTTTAGAATCATCATCTTC +
Preference number: 6 (lower is better)
Translates to: VFLTAVVSIVSI*EAFLFFRIIIF
Trigger: GAAGATGATGATTCTAAAGAACAAGAAGGCTTCCCAAATGGACACAATGGAGACAACAGCAGTGAGGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2
CDS CAA 72 bp CCACTGAGTTTCCCAGATTCTTTGGTAATAATACTTTaGTTGCCTTTGTTGGGACCTTCAGTTTCTATTCCC +
Preference number: 6 (lower is better)
Translates to: PLSFPDSLVIIL*LPLLGPSVSIP
Trigger: GGGAATAGAAACTGAAGGTCCCAACAAAGGCAACAAAAGTATTATTACCAAAGAATCTGGGAAACTCAGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112771.2