RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DSP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054889

Ensembl transcript IDs: ENSMUST00000124830.3, ENSMUST00000127906.8

Found 815 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAAGCCAAATAAACAGAACACTTTGGCTAACAAAAAGCCAAGATTaGTGCTATTGTGGACATAGTCAAAGTAATACCAAACCAAACAAG +
Preference number: 1 (lower is better)
Translates to: TSQINRTLWLTKSQD*CYCGHSQSNTKPNK
Trigger: CTTGTTTGGTTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAGCCAAAGTGTTCTGTTTATTTGGCTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
3UTR-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGATGAGCCTTTACTACTaGGATTTTATTGCAGCTACG +
Preference number: 2 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQMSLYY*DFIAAT
Trigger: CGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCAT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
3UTR CCA 72 bp ACACGGAAAATGACAAGCCAAATAAACAGAACACTTTaGCTAACAAAAAGCCAAGATTGCTGCTATTGTGGA +
Preference number: 3 (lower is better)
Translates to: TRKMTSQINRTL*LTKSQDCCYCG
Trigger: TCCACAATAGCAGCAATCTTGGCTTTTTGTTAGCCAAAGTGTTCTGTTTATTTGGCTTGTCATTTTCCGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
3UTR-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATACTACTGGGATTTTATaGCAGCTACGTCTTGAACAT +
Preference number: 3 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNTTGIL*QLRLEH
Trigger: ATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
3UTR-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAACTACTGGGATTTTATaGCAGCTACGTCTTGAACAT +
Preference number: 3 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKTTGIL*QLRLEH
Trigger: ATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGGGAGTAGAACGTCCTaGTGGTGCCCCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLGSRTS*WCPRRR
Trigger: GCGGCGGCGGGGGCACCAGCAGGACGTTCTACTCCC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACGGGAGTAGAACGTCCTaGTGGTGCCCCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNGSRTS*WCPRRR
Trigger: GCGGCGGCGGGGGCACCAGCAGGACGTTCTACTCCC...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCGGCTCCCTTGGAGCTaGCTCTTCGGACCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLRLPWS*LFGPEG
Trigger: TCCCTCGGGTCCGAAGAGCCAGCTCCAAGGGAGCCG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTGCGACCCAGCGTGTTaGTCCGCGGGTGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSCDPAC*SAGGSR
Trigger: GCGGCTCCCACCCGCGGATCAACACGCTGGGTCGCA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGCCTCCTCCAGGGACTaGTTGTGCCTGGCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLASSRD*LCLALS
Trigger: GGACAACGCCAGGCACAAGCAGTCCCTGGAGGAGGC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCGTGTTGATCCGCGGGTaGGAGCCGCCGTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVVLIRG*EPPLQL
Trigger: GAGCTGCAACGGCGGCTCCCACCCGCGGATCAACAC...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCACCCTCCGGCTCCCTTaGAGCTGGCTCTTCGGACCC +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVTLRLP*SWLFGP
Trigger: GGGTCCGAAGAGCCAGCTCCAAGGGAGCCGGAGGGT...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATGCGACCCAGCGTGTTaGTCCGCGGGTGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKCDPAC*SAGGSR
Trigger: GCGGCTCCCACCCGCGGATCAACACGCTGGGTCGCA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCATCCCTCTGCTGCCTaGGGTCATCCTCGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLHPSAA*GHPRSS
Trigger: AGAGGAGCGAGGATGACCTCAGGCAGCAGAGGGATG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCCTCCTGGGTCCTCTaGTTCTCCCTCACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSSWVL*FSLTWP
Trigger: TGGCCACGTGAGGGAGAAGCAGAGGACCCAGGAGGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCATCCTCCAGCCGCTaGAGCCTCGCCTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSSSSR*SLALSC
Trigger: GCAAGACAAGGCGAGGCTGCAGCGGCTGGAGGATGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAAGTAGAACGTCCTGCTaGTGCCCCCGCCGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSRTSC*CPRRRP
Trigger: GGGGCGGCGGCGGGGGCACCAGCAGGACGTTCTACT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAGTAGAACGTCCTGCTaGTGCCCCCGCCGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSRTSC*CPRRRP
Trigger: GGGGCGGCGGCGGGGGCACCAGCAGGACGTTCTACT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACGAGAGGTGGCCTGGATaGTGTTCTGCAGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNERWPG*CSAAGA
Trigger: TGCGCCAGCTGCAGAACATCATCCAGGCCACCTCTC...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTCCGATGGGGATCGATaGTACCACCGGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSDGDR*YHRWLP
Trigger: AGGCAGCCACCGGTGGTATCATCGATCCCCATCGGA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTCCGATGGGGATCGATaGTACCACCGGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVSDGDR*YHRWLP
Trigger: AGGCAGCCACCGGTGGTATCATCGATCCCCATCGGA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTCTCCTTCGGGTCGATaGTGCCGCCGGTTGCGATCT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSPSGR*CRRLRS
Trigger: AGATCGCAACCGGCGGCATCATCGACCCGAAGGAGA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTGGCTTCTTCGGTGCTaGTCCTCCCATGCACTTCCG +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLWLLRC*SSHALP
Trigger: CGGAAGTGCATGGGAGGATCAGCACCGAAGAAGCCA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCCAGCACATCCCTCTaGTGCCTGAGGTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSSTSL*CLRSSS
Trigger: CGAGGATGACCTCAGGCAGCAGAGGGATGTGCTGGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTCATCCTCCAGCCGCTaGAGCCTCGCCTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSSSSR*SLALSC
Trigger: GCAAGACAAGGCGAGGCTGCAGCGGCTGGAGGATGA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCAGGAAGCGCTGGCCTaGCTCGTAGGGAAGCCATTT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLQEALA*LVGKPF
Trigger: AAATGGCTTCCCTACGAGGCAGGCCAGCGCTTCCTG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCATGTCCACGCCTCCTaGGCCCGTCACGTACCACTT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNHVHAS*ARHVPL
Trigger: AAGTGGTACGTGACGGGCCCAGGAGGCGTGGACATG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCCGATGAAGGCCTTCTaGGCAGGCTTCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNPMKAF*AGFSLV
Trigger: CACCAGGCTGAAGCCTGCCCAGAAGGCCTTCATCGG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCCGATGAAGGCCTTCTaGGCAGGCTTCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVPMKAF*AGFSLV
Trigger: CACCAGGCTGAAGCCTGCCCAGAAGGCCTTCATCGG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCCTCCCGTGAGGAACTaGAACTCCAGGAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVPPVRN*NSRKRW
Trigger: CCAGCGCTTCCTGGAGTTCCAGTTCCTCACGGGAGG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCGATGTGCTGTTCCACTaGACCAGCGTCCACACCCCA +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVDVLFH*TSVHTP
Trigger: TGGGGTGTGGACGCTGGTTCAGTGGAACAGCACATC...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAGGGGTATTTCTTCCTaGTGGAGTCCTGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLRGISS*WSPAGP
Trigger: AGGGCCTGCAGGACTCCATCAGGAAGAAATACCCCT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCGCTTGGCCTCCTCCTaGTACTCAGCTTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLRLASS*YSALSL
Trigger: AAGGCTCAAAGCTGAGTATCAGGAGGAGGCCAAGCG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCTCTTCGATCCTCTTaGTCTCCGCCTGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSLRSS*SPPGAS
Trigger: AGAGGCTCCAGGCGGAGATCAAGAGGATCGAAGAGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCGGTCACGGGTTGTCTaGTTCCCTGGAAGGACATGC +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVRSRVV*FPGRTC
Trigger: GCATGTCCTTCCAGGGAATCAGACAACCCGTGACCG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCCACCCGCCGCTTTCTaGGCGTGTTCTTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVPPAAF*ACSSEK
Trigger: CTTCTCAGAAGAACACGCTCAGAAAGCGGCGGGTGG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCCACCCGCCGCTTTCTaGGCGTGTTCTTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNPPAAF*ACSSEK
Trigger: CTTCTCAGAAGAACACGCTCAGAAAGCGGCGGGTGG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCTCCTCCAGAGGGTCTaGCAGAGAGCTGCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNLLQRV*QRAASD
Trigger: ATCCGAAGCAGCTCTCTGTCAGACCCTCTGGAGGAG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCTCCTCCAGAGGGTCTaGCAGAGAGCTGCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVLLQRV*QRAASD
Trigger: ATCCGAAGCAGCTCTCTGTCAGACCCTCTGGAGGAG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACGAAGCCTCTGACCGGTaGTGCTATCCACAATGCCCC +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNEASDR*CYPQCP
Trigger: GGGGCATTGTGGATAGCATCACCGGTCAGAGGCTTC...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCAACAAGGCCTCCCGTaGGGAACTGGAACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNQQGLP*GTGTPG
Trigger: TCCTGGAGTTCCAGTTCCTCACGGGAGGCCTTGTTG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTGGCTTCTTCGGTGCTaGTCCTCCCATGCACTTCCG +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNWLLRC*SSHALP
Trigger: CGGAAGTGCATGGGAGGATCAGCACCGAAGAAGCCA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCAGCTCTCGGTTCCATaGCAGCTGCATCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVQLSVP*QLHPFS
Trigger: GGAGAAGGGATGCAGCTGGCATGGAACCGAGAGCTG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTCCAGGGACTGCTTGTaGCTGGCGTTGTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSRDCL*LALSSE
Trigger: CTCAGAGGACAACGCCAGGCACAAGCAGTCCCTGGA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCAGGAAGCGCTGGCCTaGCTCGTAGGGAAGCCATTT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNQEALA*LVGKPF
Trigger: AAATGGCTTCCCTACGAGGCAGGCCAGCGCTTCCTG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGTGTTGATCCGCGGGTaGGAGCCGCCGTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNVLIRG*EPPLQL
Trigger: GAGCTGCAACGGCGGCTCCCACCCGCGGATCAACAC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCGGCTCCCTTGGAGCTaGCTCTTCGGACCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNRLPWS*LFGPEG
Trigger: TCCCTCGGGTCCGAAGAGCCAGCTCCAAGGGAGCCG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGACCCTCCGGCTCCCTTaGAGCTGGCTCTTCGGACCC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQTLRLP*SWLFGP
Trigger: GGGTCCGAAGAGCCAGCTCCAAGGGAGCCGGAGGGT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGATGATGTTCTGCAGCTaGCGCAGGTGGTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLMMFCS*RRWSIL
Trigger: GAGGATGGACCACCTGCGCCAGCTGCAGAACATCAT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCAGAATCACCCCGGATaGGGACTGAACCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLQNHPG*GLNHGP
Trigger: AGGACCATGGTTCAGTCCCCATCCGGGGTGATTCTG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCCTCTTCCTTCTGCATaGTCAGCTGGTGGATCGTGG +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLPLPSA*SAGGSW
Trigger: CCACGATCCACCAGCTGACCATGCAGAAGGAAGAGG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCAGCTCCACTGCGTCTaGAGAGTGTCCATGTATGCC +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVQLHCV*RVSMYA
Trigger: GGCATACATGGACACTCTTCAGACGCAGTGGAGCTG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGGCTTCTGGGCATCGGTaGACTGGGACTGCATCCGCC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQASGHR*TGTASA
Trigger: GGCGGATGCAGTCCCAGTTCACCGATGCCCAGAAGC...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAGCTTCTGGGCATCGGTaGACTGGGACTGCATCCGCC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKASGHR*TGTASA
Trigger: GGCGGATGCAGTCCCAGTTCACCGATGCCCAGAAGC...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCACAAGCTTGGCCTTaGACTGGGAACACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSQAWP*TGNTLP
Trigger: AGGCAGAGTGTTCCCAGTTCAAGGCCAAGCTTGTGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCCAGCTTCTGCCAGCTaGGGTTCTCCTTCTCACACT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNPASAS*GSPSHT
Trigger: AGTGTGAGAAGGAGAACCTCAGCTGGCAGAAGCTGG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCTGAGCGCTGCTGGATaGCCTGCTTCAGTTCAATCT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLLSAAG*PASVQS
Trigger: AGATTGAACTGAAGCAGGTCATCCAGCAGCGCTCAG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTGTTCTTCAGCCTCTTaGCCTCCTCACACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLCSSAS*PPHTSS
Trigger: GGAGCTTGTGTGAGGAGGTCAAGAGGCTGAAGAACA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGATTCCAGCTGGGACTaGGTCTCCCTAGAAGAATCC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLDSSWD*VSLEES
Trigger: GGATTCTTCTAGGGAGACTCAGTCCCAGCTGGAATC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCGGCATTGTCCACAGTaGGCTTCTCATTCCGATGGG +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVRHCPQ*ASHSDG
Trigger: CCCATCGGAATGAGAAGCTCACTGTGGACAATGCCG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCCTGGAGGAAGTCCTTaGTTCTCTCCCCAACCTCAT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLPGGSP*FSPQPH
Trigger: ATGAGGTTGGGGAGAGAATCAAGGACTTCCTCCAGG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACGCCTGCTATGCAGCTTaGACCCTGGAGGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNACYAA*TLEEVL
Trigger: AAGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGC...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCCTGGTGGAGCCGTCTaGTCCTGTGATGGTTATTTC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLPGGAV*SCDGYF
Trigger: GAAATAACCATCACAGGATCAGACGGCTCCACCAGG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTCCATTTCCTCCCTCTaGTGCCTCATCCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSISSL*CLIQPR
Trigger: TCTGGGCTGGATGAGGCAGCAGAGGGAGGAAATGGA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTGCCTGCGGATCTTCTaGAGCTCCATCAGCAACCAT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLCLRIF*SSISNH
Trigger: ATGGTTGCTGATGGAGCTGCAGAAGATCCGCAGGCA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGATCTGCTGTGCCTTCTaGAGCTCCGTCTTCATGGTG +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLICCAF*SSVFMV
Trigger: CACCATGAAGACGGAGCTGCAGAAGGCACAGCAGAT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCGGGCGCCCTCTTCCTaGAGCAGAACCCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNRAPSS*SRTLNL
Trigger: GAGGTTGAGGGTTCTGCTGCAGGAAGAGGGCGCCCG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCGGGCGCCCTCTTCCTaGAGCAGAACCCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQRAPSS*SRTLNL
Trigger: GAGGTTGAGGGTTCTGCTGCAGGAAGAGGGCGCCCG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGCGTCATCGAGGGACTaGTTGTACCTCATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLASSRD*LYLMLS
Trigger: AGAGAGCATGAGGTACAAGCAGTCCCTCGATGACGC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCGTTCTGGATCTGCTaGTTCTCACACTCCAGACGC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSFWIC*FSHSRR
Trigger: GCGTCTGGAGTGTGAGAAGCAGCAGATCCAGAACGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTGGGCATCGGTGAACTaGGACTGCATCCGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSWASVN*DCIRRL
Trigger: CAAGCGGCGGATGCAGTCCCAGTTCACCGATGCCCA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAGGTTCTCGGTGGTCTaGGCTAGAGTGTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLRFSVV*ARVFFS
Trigger: GCTGAAGAACACTCTAGCCCAGACCACCGAGAACCT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCCTCCAGCGTTGCTTTaGCACGGTTCAGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVPPALL*HGSAHP
Trigger: AGGATGAGCTGAACCGTGCCAAAGCAACGCTGGAGG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCACTCGTATTCCGTCTaGGTCTCCCGATGGGACCCG +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSHSYSV*VSRWDP
Trigger: CGGGTCCCATCGGGAGACCCAGACGGAATACGAGTG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCCACCGGTGGCTGCCTaGGCCTCCAGAAGCATGACA +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNPPVAA*ASRSMT
Trigger: TGTCATGCTTCTGGAGGCCCAGGCAGCCACCGGTGG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACCACCGGTGGCTGCCTaGGCCTCCAGAAGCATGACA +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKPPVAA*ASRSMT
Trigger: TGTCATGCTTCTGGAGGCCCAGGCAGCCACCGGTGG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCAGGAGCAGACCCGTGTaGGGTTCGATTCTGCACCTT +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVRSRPV*GSILHL
Trigger: AAGGTGCAGAATCGAACCCCACACGGGTCTGCTCCT...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCTGGTGGCCATGTCTTaGTCAATGAGACCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLLVAMS*SMRPWL
Trigger: CAACCAGGGTCTCATTGACCAAGACATGGCCACCAG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGGAGAGGTGGCCTGGATaGTGTTCTGCAGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQERWPG*CSAAGA
Trigger: TGCGCCAGCTGCAGAACATCATCCAGGCCACCTCTC...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCAAGGCCTCCTGCTTCTaGGCGATGTTGGTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVKASCF*AMLVFL
Trigger: CAAGAACACCAACATCGCTCAGAAGCAGGAGGCCTT...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCCAGGCTCTTCATGTTaGTGTAGAGCTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLPGSSC*CRAGST
Trigger: TGTGGAACCAGCTCTACATCAACATGAAGAGCCTGG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTCTCTTCGACCCTCCTaGGGTTCTCGGTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSLRPS*GSRWSG
Trigger: CCCAGACCACCGAGAACCTCAGGAGGGTCGAAGAGA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCCTTGCGGGAATACTaGGTTTTCCACTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSLREY*VFHWFR
Trigger: CCTGAACCAGTGGAAAACTCAGTATTCCCGCAAGGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGCAAGAAGACACTGTTaGCTGGATCAACTACACCCC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLARRHC*LDQLHP
Trigger: GGGGTGTAGTTGATCCAGTCAACAGTGTCTTCTTGC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCGGTCACGGGTTGTCTaGTTCCCTGGAAGGACATGC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSRSRVV*FPGRTC
Trigger: GCATGTCCTTCCAGGGAATCAGACAACCCGTGACCG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGAAGCCTCTGACCGGTaGTGCTATCCACAATGCCCC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSEASDR*CYPQCP
Trigger: GGGGCATTGTGGATAGCATCACCGGTCAGAGGCTTC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGCCTCCAGAAGCCTCTaGCCGGTGATGCTATCCACA +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSASRSL*PVMLST
Trigger: TGTGGATAGCATCACCGGTCAGAGGCTTCTGGAGGC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCAGGGCTGGCCCATCTaGCTCATCTCTCGGATCAAG +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSQGWPI*LISRIK
Trigger: CTTGATCCGAGAGATGAGGCAGATGGGCCAGCCCTG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCACGTACCACTTGCTaGGCTCGTTGTTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSRTTC*ARCCPS
Trigger: TGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATTGGTGACTGTCTGGTaGTGGGGGTGGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKLVTVW*WGWPGS
Trigger: GCTTCCTGGCCACCCCCAGCACCAGACAGTCACCAA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTTGGTGACTGTCTGGTaGTGGGGGTGGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNLVTVW*WGWPGS
Trigger: GCTTCCTGGCCACCCCCAGCACCAGACAGTCACCAA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTGGTGTGTAGAGCCTTaGTCTGCCAGCAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLWCVEP*SASRRF
Trigger: AAATCTCCTGCTGGCAGAGCAAGGCTCTACACACCA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCGCTGCTCCGTGGCCTaGAAGATGCTGTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSRCSVA*KMLSLS
Trigger: GCTCAATGACAGCATCTTGCAGGCCACGGAGCAGCG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCGGCTCTCCTTCGCTaGTCCGTGGCCTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSALLR*SVACKM
Trigger: CATCTTGCAGGCCACGGAGCAGCGAAGGAGAGCCGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCGCTGCTGGATGACCTaGTTCAGTTCAATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNRCWMT*FSSISR
Trigger: CCTGGAGATTGAACTGAAGCAGGTCATCCAGCAGCG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTCTGCTTCTGCAGCTaGAGATCCTTCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVFCFCS*RSFREL
Trigger: GAGCTCCCTGAAGGATCTGCAGCTGCAGAAGCAGAA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTCCTCTTCCGCTTTCTaGTTCTGCAGCTGCAGATCC +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVSSSAF*FCSCRS
Trigger: GGATCTGCAGCTGCAGAAGCAGAAAGCGGAAGAGGA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAGGTCGTTCTGGATCTaGTGCTTCTCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLRSFWI*CFSHSR
Trigger: TCTGGAGTGTGAGAAGCAGCAGATCCAGAACGACCT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCCCCAATGGTGTTGTaGATGCTCCTGTGGCTATTG +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSPMVL*MLLWLL
Trigger: CAATAGCCACAGGAGCATCCACAACACCATTGGGGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACAGCGGTAGTCCCCAATaGTGTTGTGGATGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSGSPQ*CCGCSC
Trigger: ACAGGAGCATCCACAACACCATTGGGGACTACCGCT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTGCAGCTGGCGCAGGTaGTCCATCCTCTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQCSWRR*SILSKE
Trigger: CTCCTTCGAGAGGATGGACCACCTGCGCCAGCTGCA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGCTTCTGAGCGATGTTaGTGTTCTTGTCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLASERC*CSCRSS
Trigger: ACTGGAGCGACAAGAACACCAACATCGCTCAGAAGC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACATGTCCACGCCTCCTaGGCCCGTCACGTACCACTT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKHVHAS*ARHVPL
Trigger: AAGTGGTACGTGACGGGCCCAGGAGGCGTGGACATG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTGGGCATCGGTGAACTaGGACTGCATCCGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNWASVN*DCIRRL
Trigger: CAAGCGGCGGATGCAGTCCCAGTTCACCGATGCCCA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACGCAGCTCCGTCTTCATaGTGGCCAACAGCGACTTTT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNAAPSS*WPTATF
Trigger: AAAAGTCGCTGTTGGCCACCATGAAGACGGAGCTGC...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCAGCGGTCCGTCAGCTaGGTCACTTTCTCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVQRSVS*VTFSVN
Trigger: ATTCACTGAGAAAGTGACCCAGCTGACGGACCGCTG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTGCAATTTTCCGAGTTaGCATCCCGGGCCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLCNFPS*HPGPVL
Trigger: TAAGACTGGCCCGGGATGCCAACTCGGAAAATTGCA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGGGACTGCTTGTGCCTaGCGTTGTCCTCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNGTACA*RCPLSA
Trigger: AGCGCTCAGAGGACAACGCCAGGCACAAGCAGTCCC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTATTCCCAGCGCCGCTTaGCCTCCTCCTGATACTCAG +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSIPSAA*PPPDTQ
Trigger: CTGAGTATCAGGAGGAGGCCAAGCGGCGCTGGGAAT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTCTGCATGGTCAGCTaGTGGATCGTGGTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVFCMVS*WIVVLV
Trigger: CACCAAGACCACGATCCACCAGCTGACCATGCAGAA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGCGCTCGGTAGCCACTaGTGTCCTCTTCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSALGSH*CPLPSA
Trigger: TGCAGAAGGAAGAGGACACCAGTGGCTACCGAGCGC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTCAAAGACCTCCTCATaGCCTCCAGTTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSKTSS*PPVPPP
Trigger: TGGAGGAGGAACTGGAGGCCATGAGGAGGTCTTTGA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGACATTCTCCTGTTCCTaGACCAGCTGCCGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQTFSCS*TSCRRR
Trigger: CCTCCGGCGGCAGCTGGTCCAGGAACAGGAGAATGT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCACTCGTATTCCGTCTaGGTCTCCCGATGGGACCCG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQHSYSV*VSRWDP
Trigger: CGGGTCCCATCGGGAGACCCAGACGGAATACGAGTG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCAAGAGTACTTTTCCTTaGGAGAAGCGGAAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVKSTFP*EKRKPR
Trigger: CCGGGGCTTCCGCTTCTCCCAAGGAAAAGTACTCTT...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGGGCAGGCTTCAGCCTaGTGGCCATGTCTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSGQASA*WPCLGQ
Trigger: TTGACCAAGACATGGCCACCAGGCTGAAGCCTGCCC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCCTCCCGTGAGGAACTaGAACTCCAGGAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQPPVRN*NSRKRW
Trigger: CCAGCGCTTCCTGGAGTTCCAGTTCCTCACGGGAGG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTCTGAAGCTGGATGCTaGTTGAGGACAAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSEAGC*LRTSWS
Trigger: TGACCAGCTTGTCCTCAATCAGCATCCAGCTTCAGA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCATCAATGCACTTGGTaGTCTGCAGAATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNHQCTW*SAESSS
Trigger: GGAGCTGGATTCTGCAGATCACCAAGTGCATTGATG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTACCCCGGATGGGGACTaGACCATGGTCCTCTTGATA +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSTPDGD*TMVLLI
Trigger: TATCAAGAGGACCATGGTTCAGTCCCCATCCGGGGT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCCTCTGAGACATCTCTaGGCCAGTGGCCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQPLRHL*ASGLLL
Trigger: CAGCAGAAGGCCACTGGCTCAGAGATGTCTCAGAGG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTGGTCAGGTTCTCCGTaGGCGACTGTAGCCTTTCGA +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSWSGSP*ATVAFR
Trigger: TCGAAAGGCTACAGTCGCTCACGGAGAACCTGACCA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTCCTTGCGGGAATACTaGGTTTTCCACTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSLREY*VFHWFR
Trigger: CCTGAACCAGTGGAAAACTCAGTATTCCCGCAAGGA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCTCGATCTCACTCCTaGGACTGTTCTTTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSRSHS*DCSFLA
Trigger: AGCGAGAAAAGAACAGTCTCAGGAGTGAGATCGAGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCGGCATTGTCCACAGTaGGCTTCTCATTCCGATGGG +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSRHCPQ*ASHSDG
Trigger: CCCATCGGAATGAGAAGCTCACTGTGGACAATGCCG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCGCAAGAAGACACTGTTaGCTGGATCAACTACACCCC +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVARRHC*LDQLHP
Trigger: GGGGTGTAGTTGATCCAGTCAACAGTGTCTTCTTGC...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCTGCCTGATCGGTATTaGTCGAAGAACTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLLPDRY*SKNFLS
Trigger: TGACAGGAAGTTCTTCGATCAATACCGATCAGGCAG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAGCCTCCAGAAGCCTCTaGCCGGTGATGCTATCCACA +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKASRSL*PVMLST
Trigger: TGTGGATAGCATCACCGGTCAGAGGCTTCTGGAGGC...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCAACAAGGCCTCCCGTaGGGAACTGGAACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQQQGLP*GTGTPG
Trigger: TCCTGGAGTTCCAGTTCCTCACGGGAGGCCTTGTTG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTTTTGGCATAGCTGCTaGTGTCCTGCAACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNFWHSC*CPATSE
Trigger: CTCAGAGGTTGCAGGACATCAGCAGCTATGCCAAAA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACAGCTCTCGGTTCCATaGCAGCTGCATCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKQLSVP*QLHPFS
Trigger: GGAGAAGGGATGCAGCTGGCATGGAACCGAGAGCTG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCAGGGCTGGCCCATCTaGCTCATCTCTCGGATCAAG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQQGWPI*LISRIK
Trigger: CTTGATCCGAGAGATGAGGCAGATGGGCCAGCCCTG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATCTGCTCCAGCAGGTaGTGGAGAGGCATATTCTTG +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNICSSR*WRGIFL
Trigger: CAAGAATATGCCTCTCCAGCACCTGCTGGAGCAGAT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTATCCTGGCCTCACAATaGTCCATCTGCCTGCGGATC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSILASQ*SICLRI
Trigger: GATCCGCAGGCAGATGGAGCATTGTGAGGCCAGGAT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTGGTGTGTAGAGCCTTaGTCTGCCAGCAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVWCVEP*SASRRF
Trigger: AAATCTCCTGCTGGCAGAGCAAGGCTCTACACACCA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAGCATGTCTTCCGTTTaGAGAATAGCCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSMSSV*RIAWRR
Trigger: CCTTCTCCAGGCTATTCTGCAAACGGAAGACATGCT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGGAGTGGATCTGCTGTaGCTTCTGCAGCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSGVDLL*LLQLRL
Trigger: AAGACGGAGCTGCAGAAGGCACAGCAGATCCACTCC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACCTGAACCTTCAGTTTaGTCATGGCCTCCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKPEPSV*SWPPWR
Trigger: GCGCCACGGAGGCCATGAGCAAACTGAAGGTTCAGG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGACGCCTGCTCCAGCTaGTGGGTCAGGTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNDACSS*WVRLVI
Trigger: AATCACCAACCTGACCCAGCAGCTGGAGCAGGCGTC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCGATTGTTGCTGATCTaGAGTTGGCTCCTTAGCTCG +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVRLLLI*SWLLSS
Trigger: CGAGCTAAGGAGCCAACTGCAGATCAGCAACAATCG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTCATTAATCAGCCCCTaGAGCTCGAGGGTTCGATTG +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVSLISP*SSRVRL
Trigger: CAATCGAACCCTCGAGCTGCAGGGGCTGATTAATGA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACAGCCTCGCCTTGTCTTaGTCCAGGACTTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSLALS*SRTLIF
Trigger: GAAGATCAAAGTCCTGGAGCAAGACAAGGCGAGGCT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCCGCTCTATACCTTCTaGGATCGAGATTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLPLYTF*DRDFLQ
Trigger: CTGGAGAAAATCTCGATCGCAGAAGGTATAGAGCGG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTACGCATCACAGGGCTaGCCCATCTGCCTCATCTCT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSYASQG*PICLIS
Trigger: AGAGATGAGGCAGATGGGCCAGCCCTGTGATGCGTA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGTTTTGGTGACTGTCTaGTGCTGGGGGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNVLVTV*CWGWPG
Trigger: TCCTGGCCACCCCCAGCACCAGACAGTCACCAAAAC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGGTTTTGGTGACTGTCTaGTGCTGGGGGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQVLVTV*CWGWPG
Trigger: TCCTGGCCACCCCCAGCACCAGACAGTCACCAAAAC...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACGCTCCGTCTTCATGGTaGCCAACAGCGACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNAPSSW*PTATFS
Trigger: TGAAAAAGTCGCTGTTGGCCACCATGAAGACGGAGC...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACAGCTTGGCCTTGAACTaGGAACACTCTGCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSLALN*EHSAWY
Trigger: ATACCAGGCAGAGTGTTCCCAGTTCAAGGCCAAGCT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTGTCCTGGATGGTCTTaGCAGCCTCCTCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQCPGWS*QPPPGT
Trigger: AGTCCCTGGAGGAGGCTGCCAAGACCATCCAGGACA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGACATCTCTGAGCCAGTaGCCTTCTGCTGCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQTSLSQ*PSAAGR
Trigger: ACGCCCAGCAGCAGAAGGCCACTGGCTCAGAGATGT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATGCTTCTCCCTCACGTaGCCATCCAGCACATCCCTC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKCFSLT*PSSTSL
Trigger: GAGGGATGTGCTGGATGGCCACGTGAGGGAGAAGCA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACAGCTTCTCATTCCGATaGGGATCGATGATACCACCG +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSFSFR*GSMIPP
Trigger: CGGTGGTATCATCGATCCCCATCGGAATGAGAAGCT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTCTCTGTGTCAAAGATaGCCGCAATGGGGCTTGACT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSLCQR*PQWGLT
Trigger: AGTCAAGCCCCATTGCGGCCATCTTTGACACAGAGA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTAAGGCCTCCTGCTTCTaGGCGATGTTGGTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSKASCF*AMLVFL
Trigger: CAAGAACACCAACATCGCTCAGAAGCAGGAGGCCTT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACAGCTCCACTGCGTCTaGAGAGTGTCCATGTATGCC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKQLHCV*RVSMYA
Trigger: GGCATACATGGACACTCTTCAGACGCAGTGGAGCTG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAAGGGGTATTTCTTCCTaGTGGAGTCCTGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKRGISS*WSPAGP
Trigger: AGGGCCTGCAGGACTCCATCAGGAAGAAATACCCCT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCTTTCTCCAGCTCTTTaGTCTGCTCCAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSLSPAL*SAPAGA
Trigger: AGCACCTGCTGGAGCAGATCAAAGAGCTGGAGAAAG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCACTTTATTGTGGTTaGCATCTTGGCAGGTACCCA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSLYCG*HLGRYP
Trigger: TGGGTACCTGCCAAGATGTCAACCACAATAAAGTGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATACCCCGGATGGGGACTaGACCATGGTCCTCTTGATA +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNTPDGD*TMVLLI
Trigger: TATCAAGAGGACCATGGTTCAGTCCCCATCCGGGGT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTCACAAGCTTGGCCTTaGACTGGGAACACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSSQAWP*TGNTLP
Trigger: AGGCAGAGTGTTCCCAGTTCAAGGCCAAGCTTGTGA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACCAGCTTCTGCCAGCTaGGGTTCTCCTTCTCACACT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKPASAS*GSPSHT
Trigger: AGTGTGAGAAGGAGAACCTCAGCTGGCAGAAGCTGG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAGCTCTGGATCCTCGTaGTGTCCTGATCCTTCACGG +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSSGSS*CPDPSR
Trigger: CCGTGAAGGATCAGGACATCACGAGGATCCAGAGCT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCTTGCTCCAGGACTTTaGTCTTCACCAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSLAPGL*SSPAGS
Trigger: AGAGCCTGCTGGTGAAGATCAAAGTCCTGGAGCAAG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATCTCTTCGATCCTCTTaGTCTCCGCCTGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSLRSS*SPPGAS
Trigger: AGAGGCTCCAGGCGGAGATCAAGAGGATCGAAGAGA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGCCTGCTATGCAGCTTaGACCCTGGAGGAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNACYAA*TLEEVL
Trigger: AAGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCTGCCTGATCGGTATTaGTCGAAGAACTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVLPDRY*SKNFLS
Trigger: TGACAGGAAGTTCTTCGATCAATACCGATCAGGCAG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGAAGCCATTTCTCTTTaGCTGCCTCTGCTGCCGACA +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSEAISL*LPLLPT
Trigger: TGTCGGCAGCAGAGGCAGTCAAAGAGAAATGGCTTC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTCCATTTCCTCCCTCTaGTGCCTCATCCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSISSL*CLIQPR
Trigger: TCTGGGCTGGATGAGGCAGCAGAGGGAGGAAATGGA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACCGTCACGTACCACTTaGTGCGCTCGTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKPSRTT*CARCCP
Trigger: AGGACAACAACGAGCGCAGCAAGTGGTACGTGACGG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCCGTCACGTACCACTTaGTGCGCTCGTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNPSRTT*CARCCP
Trigger: AGGACAACAACGAGCGCAGCAAGTGGTACGTGACGG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAGTACTGCTCAATCTTaGAAGAAAGGTCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSTAQS*KKGPQP
Trigger: TGGCTGTGGACCTTTCTTGCAAGATTGAGCAGTACT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTGTAGAGCCTTGCTCTaGCAGCAGGAGATTTTTAAG +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLCRALL*QQEIFK
Trigger: CTTAAAAATCTCCTGCTGGCAGAGCAAGGCTCTACA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTATCTGCTGTGCCTTCTaGAGCTCCGTCTTCATGGTG +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSICCAF*SSVFMV
Trigger: CACCATGAAGACGGAGCTGCAGAAGGCACAGCAGAT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGGGAGTGGATCTGCTGTaGCTTCTGCAGCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQGVDLL*LLQLRL
Trigger: AAGACGGAGCTGCAGAAGGCACAGCAGATCCACTCC...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTGTTTATCTATCTTTTaGCAGCGGTCCGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVCLSIF*QRSVSW
Trigger: CCAGCTGACGGACCGCTGGCAAAAGATAGATAAACA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACGAACTGGGAACACTCTaGCTGGTATTTCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNELGTL*LVFLQV
Trigger: AACCTGCAGAAATACCAGGCAGAGTGTTCCCAGTTC...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCTGTTGTTGGCTTTCTaGAGGTCATACTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVLLLAF*RSYWTL
Trigger: GAGAGTCCAGTATGACCTGCAGAAAGCCAACAACAG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTTAACAATGGACGCCTaGTCCAGCTGCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNLTMDA*SSCWVR
Trigger: CCTGACCCAGCAGCTGGAGCAGGCGTCCATTGTTAA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTCGTTCTGGATCTGCTaGTTCTCACACTCCAGACGC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSSFWIC*FSHSRR
Trigger: GCGTCTGGAGTGTGAGAAGCAGCAGATCCAGAACGA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTTCCCTGGAAGGACATaGTTCTCTTCTGTACTGACA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLFPGRT*FSSVLT
Trigger: TGTCAGTACAGAAGAGAAGCATGTCCTTCCAGGGAA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTGGACGGTCTCAATATaGCAGAATCAACCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNWTVSI*QNQPVR
Trigger: CCGAACTGGTTGATTCTGGCATATTGAGACCGTCCA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCAATAAAGCCAGTAGCTaGTTGGGCTTCCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVNKASS*LGFQQL
Trigger: GAGTTGCTGGAAGCCCAAGCAGCTACTGGCTTTATT...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCTCTTTGACTGCCTCTaGTGCCGACATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVLFDCL*CRHLLL
Trigger: AAGAAGAAGATGTCGGCAGCAGAGGCAGTCAAAGAG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGTGCTGATCCTCCCATaGACTTCCGGGTCAACAAGG +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNVLILP*TSGSTR
Trigger: CCTTGTTGACCCGGAAGTGCATGGGAGGATCAGCAC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAGTGCTGATCCTCCCATaGACTTCCGGGTCAACAAGG +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKVLILP*TSGSTR
Trigger: CCTTGTTGACCCGGAAGTGCATGGGAGGATCAGCAC...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTACGCATCACAGGGCTaGCCCATCTGCCTCATCTCT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQYASQG*PICLIS
Trigger: AGAGATGAGGCAGATGGGCCAGCCCTGTGATGCGTA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTAGCGGTAGTCCCCAATaGTGTTGTGGATGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSSGSPQ*CCGCSC
Trigger: ACAGGAGCATCCACAACACCATTGGGGACTACCGCT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGATGATGTTCTGCAGCTaGCGCAGGTGGTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQMMFCS*RRWSIL
Trigger: GAGGATGGACCACCTGCGCCAGCTGCAGAACATCAT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCTCGAGAGGTGGCCTaGATGATGTTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSREVA*MMFCSW
Trigger: CCAGCTGCAGAACATCATCCAGGCCACCTCTCGAGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATCTCGAGAGGTGGCCTaGATGATGTTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSREVA*MMFCSW
Trigger: CCAGCTGCAGAACATCATCCAGGCCACCTCTCGAGA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCCACAGAGCCAAGATaGCTTCATAGTACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSTEPR*LHSTAQ
Trigger: TTGAGCAGTACTATGAAGCCATCTTGGCTCTGTGGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCAGCGGTCCGTCAGCTaGGTCACTTTCTCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSQRSVS*VTFSVN
Trigger: ATTCACTGAGAAAGTGACCCAGCTGACGGACCGCTG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCAGAATCACCCCGGATaGGGACTGAACCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQQNHPG*GLNHGP
Trigger: AGGACCATGGTTCAGTCCCCATCCGGGGTGATTCTG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCCTTCGCTGCTCCGTaGCCTGCAAGATGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSFAAP*PARCCH
Trigger: ATGACAGCATCTTGCAGGCCACGGAGCAGCGAAGGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTCCTCTGAGCGCTGCTaGATGACCTGCTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSSSERC*MTCFSS
Trigger: TGAACTGAAGCAGGTCATCCAGCAGCGCTCAGAGGA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTGTTCTTGTCCTGGATaGTCTTGGCAGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSCSCPG*SWQPPP
Trigger: TGGAGGAGGCTGCCAAGACCATCCAGGACAAGAACA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTGTTCTTATCCTGGATaGTCTTGGCAGCGTCATCGA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNCSYPG*SWQRHR
Trigger: TCGATGACGCTGCCAAGACCATCCAGGATAAGAACA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCCTTCAGTTTGCTCATaGCCTCCGTGGCGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQPSVCS*PPWRCC
Trigger: ACAACAGCGCCACGGAGGCCATGAGCAAACTGAAGG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCTCTTGATCTCCGCCTaGAGCCTCTCGATCTCACTC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQLLISA*SLSISL
Trigger: GAGTGAGATCGAGAGGCTCCAGGCGGAGATCAAGAG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCTCTTGATCTCCGCCTaGAGCCTCTCGATCTCACTC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNLLISA*SLSISL
Trigger: GAGTGAGATCGAGAGGCTCCAGGCGGAGATCAAGAG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCATCAAATACCAGCTTaGAGGAATCAACGGTCCACT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLHQIPA*RNQRST
Trigger: AGTGGACCGTTGATTCCTCCAAGCTGGTATTTGATG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTAAGAGTACTTTTCCTTaGGAGAAGCGGAAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSKSTFP*EKRKPR
Trigger: CCGGGGCTTCCGCTTCTCCCAAGGAAAAGTACTCTT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCAAGGCGACATCTTTTaGCAAGAAGACACTGTTGAC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLQGDIF*QEDTVD
Trigger: GTCAACAGTGTCTTCTTGCCAAAAGATGTCGCCTTG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGAGGAGCAGACCCGTGTaGGGTTCGATTCTGCACCTT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQRSRPV*GSILHL
Trigger: AAGGTGCAGAATCGAACCCCACACGGGTCTGCTCCT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCCAGTTCGTTTACAGTaGACGGTCTCAATATGCCAG +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNPVRLQ*TVSICQ
Trigger: CTGGCATATTGAGACCGTCCACTGTAAACGAACTGG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCATGCAGCTTGAACCCTaGAGGAAGTCCTTGATTCTC +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVMQLEP*RKSLIL
Trigger: GAGAATCAAGGACTTCCTCCAGGGTTCAAGCTGCAT...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCTAAGCCTATTTTCATaGCCTCATAGATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLLSLFS*PHRCPA
Trigger: AGCTGGGCATCTATGAGGCCATGAAAATAGGCTTAG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCTTTCTCCAGCTCTTTaGTCTGCTCCAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNLSPAL*SAPAGA
Trigger: AGCACCTGCTGGAGCAGATCAAAGAGCTGGAGAAAG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTAGCATGTCTTTAAGCTaGTTGAGAACCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSSMSLS*LRTSAR
Trigger: CCTGGCCGAGGTTCTCAATCAGCTTAAAGACATGCT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAATTCCTCAGTTGTTTaGTTTGTTTCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLNSSVV*FVSPGP
Trigger: GGGACCTGGAGAAACAAATCAAACAACTGAGGAATT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCATTCAAAAACCGCATaGCTGTGTTGGAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLHSKTA*LCWNLQ
Trigger: TTGGAGATTCCAACACAGTCATGCGGTTTTTGAATG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTGCTCATTCCTCAAGTaGGCCTGCTTGACATTCTCC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSCSFLK*ACLTFS
Trigger: GGAGAATGTCAAGCAGGCTCACTTGAGGAATGAGCA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCAGTGCACTGACTCTTTaGCTCCTGGATCCTATTAGA +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVSALTL*LLDPIR
Trigger: TCTAATAGGATCCAGGAGTCAAAGAGTCAGTGCACT...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCTTGCTCCAGGACTTTaGTCTTCACCAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQLAPGL*SSPAGS
Trigger: AGAGCCTGCTGGTGAAGATCAAAGTCCTGGAGCAAG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGATTCCAGCTGGGACTaGGTCTCCCTAGAAGAATCC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNDSSWD*VSLEES
Trigger: GGATTCTTCTAGGGAGACTCAGTCCCAGCTGGAATC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGGGTCATCGAAACCAGTaGTGGCTTTCTCCGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQGHRNQ*WLSPLC
Trigger: ACACAGCGGAGAAAGCCATCACTGGTTTCGATGACC...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCTTCTTGATGGCTTCTaGAACAGAGACCGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSLLDGF*NRDRLA
Trigger: GGCAAGACGGTCTCTGTTTCAGAAGCCATCAAGAAG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAGGTGTCATAATCAATaGGACCTTTCTTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLRCHNQ*DLSCRP
Trigger: AGGCCTACAAGAAAGGTCTCATTGATTATGACACCT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCAGCCGTCTGATCCTGTaGTGGTTATTTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVSRLIL*WLFLPI
Trigger: AATGGGAAGAAATAACCATCACAGGATCAGACGGCT...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACAGCCGTCTGATCCTGTaGTGGTTATTTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSRLIL*WLFLPI
Trigger: AATGGGAAGAAATAACCATCACAGGATCAGACGGCT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACCTGGTGGAGCCGTCTaGTCCTGTGATGGTTATTTC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKPGGAV*SCDGYF
Trigger: GAAATAACCATCACAGGATCAGACGGCTCCACCAGG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGAAGCCATTTCTCTTTaGCTGCCTCTGCTGCCGACA +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNEAISL*LPLLPT
Trigger: TGTCGGCAGCAGAGGCAGTCAAAGAGAAATGGCTTC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTATCTGCTCCAGCAGGTaGTGGAGAGGCATATTCTTG +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSICSSR*WRGIFL
Trigger: CAAGAATATGCCTCTCCAGCACCTGCTGGAGCAGAT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACAGTACTGCTCAATCTTaGAAGAAAGGTCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSTAQS*KKGPQP
Trigger: TGGCTGTGGACCTTTCTTGCAAGATTGAGCAGTACT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATGCCTGCGGATCTTCTaGAGCTCCATCAGCAACCAT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKCLRIF*SSISNH
Trigger: ATGGTTGCTGATGGAGCTGCAGAAGATCCGCAGGCA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTCACAATGCTCCATCTaGCTGCGGATCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSQCSI*LRIFCS
Trigger: GCTGCAGAAGATCCGCAGGCAGATGGAGCATTGTGA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCTGTGCAGGTTCTTCTaGTCATTCAAAAACCGCATG +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVLCRFF*SFKNRM
Trigger: CATGCGGTTTTTGAATGAGCAGAAGAACCTGCACAG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCAGACTCCAGCTTCTaGCAGCTGAGGTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSDSSF*QLRFSF
Trigger: GAAGGAGAACCTCAGCTGGCAGAAGCTGGAGTCTGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATCAGACTCCAGCTTCTaGCAGCTGAGGTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSDSSF*QLRFSF
Trigger: GAAGGAGAACCTCAGCTGGCAGAAGCTGGAGTCTGA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTTGTCCTCTGAGCGCTaGTGGATGACCTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNLSSER*WMTCFS
Trigger: ACTGAAGCAGGTCATCCAGCAGCGCTCAGAGGACAA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGTGTCCTCTTCCTTCTaGATGGTCAGCTGGTGGATC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNVSSSF*MVSWWI
Trigger: GATCCACCAGCTGACCATGCAGAAGGAAGAGGACAC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCATACTGGACTCTCTaGAACTTGGAATTTTCGTCC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSYWTL*NLEFSS
Trigger: GGACGAAAATTCCAAGTTGCAGAGAGTCCAGTATGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTCCGCTTTCTGCTTCTaGAGCTGCAGATCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSAFCF*SCRSFR
Trigger: CCTGAAGGATCTGCAGCTGCAGAAGCAGAAAGCGGA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACGTGATTTTGACGGCTTaGTCTTTCAAAGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNVILTA*SFKDLL
Trigger: GAGGAGGTCTTTGAAAGAGCAAGCCGTCAAAATCAC...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCCTCTAGCTTCCTCCTaGATCTCTCTTCGATCCTCT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSPLASS*ISLRSS
Trigger: AGAGGATCGAAGAGAGATGCAGGAGGAAGCTAGAGG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTTCCCTGGAAGGACATaGTTCTCTTCTGTACTGACA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNFPGRT*FSSVLT
Trigger: TGTCAGTACAGAAGAGAAGCATGTCCTTCCAGGGAA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTATATATGCCTGCTATaGAGCTTGAACCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNYICLL*SLNPGG
Trigger: TCCTCCAGGGTTCAAGCTGCATAGCAGGCATATATA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGAGACCCTGGTTGACTaGATCTTGAAGGGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSETLVD*ILKGEL
Trigger: AAGCTCTCCCTTCAAGATGCAGTCAACCAGGGTCTC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGCGTTTTCTTTGAGATaGACATCAATGCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLAFSLR*TSMHLV
Trigger: CACCAAGTGCATTGATGTCCATCTCAAAGAAAACGC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGCTGCACGATCTTCTTaGACTTGTTTACCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLAARSS*TCLPSS
Trigger: AGAACTTGGTAAACAAGTCCAAGAAGATCGTGCAGC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTCCACAGAGCCAAGATaGCTTCATAGTACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSTEPR*LHSTAQ
Trigger: TTGAGCAGTACTATGAAGCCATCTTGGCTCTGTGGA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGTTTGCAGAATAGCCTaGAGAAGGGCTCTCACGGAA +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSVCRIA*RRALTE
Trigger: TTCCGTGAGAGCCCTTCTCCAGGCTATTCTGCAAAC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGCTCCGTCTTCATGGTaGCCAACAGCGACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSAPSSW*PTATFS
Trigger: TGAAAAAGTCGCTGTTGGCCACCATGAAGACGGAGC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGAGTCCTGGCGGCGTTTaGCATCATATAGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSPGGV*HHIATC
Trigger: GCAAGTGGCTATATGATGCCAAACGCCGCCAGGACT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGCTGCTTCTTCTGCATaGTTTCCGAGCCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNAASSA*FPSHRL
Trigger: AAGCCTGTGGCTCGGAAACCATGCAGAAGAAGCAGC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATGCATGGTCAGCTGGTaGATCGTGGTCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKCMVSW*IVVLVM
Trigger: CATCACCAAGACCACGATCCACCAGCTGACCATGCA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATATCCTGGATGGTCTTaGCAGCGTCATCGAGGGACT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKYPGWS*QRHRGT
Trigger: AGTCCCTCGATGACGCTGCCAAGACCATCCAGGATA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTTCTGCAGGTCATACTaGACTCTCTGCAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNFCRSY*TLCNLE
Trigger: TTCCAAGTTGCAGAGAGTCCAGTATGACCTGCAGAA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACCGTGGCGCTGTTGTTaGCTTTCTGCAGGTCATACT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKPWRCC*LSAGHT
Trigger: AGTATGACCTGCAGAAAGCCAACAACAGCGCCACGG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTGGTTCAGGTCGTTCTaGATCTGCTGCTTCTCACAC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSWFRSF*ICCFSH
Trigger: GTGTGAGAAGCAGCAGATCCAGAACGACCTGAACCA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCTAAGCCTATTTTCATaGCCTCATAGATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNLSLFS*PHRCPA
Trigger: AGCTGGGCATCTATGAGGCCATGAAAATAGGCTTAG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGAGCAAGCGAATGCCATaGCCCTTTTCGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSKRMP*PFSMSS
Trigger: GGAGCTCATCGAAAAGGGCCATGGCATTCGCTTGCT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAGCAAGCGAATGCCATaGCCCTTTTCGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSKRMP*PFSMSS
Trigger: GGAGCTCATCGAAAAGGGCCATGGCATTCGCTTGCT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTCTCTGTGTCAAAGATaGCCGCAATGGGGCTTGACT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSSLCQR*PQWGLT
Trigger: AGTCAAGCCCCATTGCGGCCATCTTTGACACAGAGA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCCATGGAGCGATTCATaGCATCCTTGTAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNPWSDS*HPCRRF
Trigger: AAATCTCCTACAAGGATGCCATGAATCGCTCCATGG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTAAGCTGGATGCTGATTaGGGACAAGCTGGTCACTTT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSKLDAD*GQAGHF
Trigger: AAAGTGACCAGCTTGTCCTCAATCAGCATCCAGCTT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTCTGAAGCTGGATGCTaGTTGAGGACAAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSEAGC*LRTSWS
Trigger: TGACCAGCTTGTCCTCAATCAGCATCCAGCTTCAGA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCATCAATGCACTTGGTaGTCTGCAGAATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNHQCTW*SAESSS
Trigger: GGAGCTGGATTCTGCAGATCACCAAGTGCATTGATG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACAAGCAGCGTTTTCTTTaGGATGGACATCAATGCACT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNKQRFL*DGHQCT
Trigger: AGTGCATTGATGTCCATCTCAAAGAAAACGCTGCTT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACGACGCTTGTATTCAATaGTCTTCTCCCGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNDACIQ*SSPVLS
Trigger: AGAAAGAACGGGAGAAGATCATTGAATACAAGCGTC...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACCAGGCTCTTCATGTTaGTGTAGAGCTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKPGSSC*CRAGST
Trigger: TGTGGAACCAGCTCTACATCAACATGAAGAGCCTGG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAAGCATGTCTTTAAGCTaGTTGAGAACCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSMSLS*LRTSAR
Trigger: CCTGGCCGAGGTTCTCAATCAGCTTAAAGACATGCT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCATCCGAGACACCATTaGTATTTTCCAGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNHPRHH*YFPASE
Trigger: TTCAGAAGCTGGAAAATATCAATGGTGTCTCGGATG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCCAGGTCCCACAATCTaGAGTCTATCTGTTTATCTA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNPGPTI*SLSVYL
Trigger: TAGATAAACAGATAGACTTCAGATTGTGGGACCTGG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTTTATGCACTTCTTCTaGTTTGTCTCGTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLFMHFF*FVSFAR
Trigger: TCTGGCAAACGAGACAAATCAGAAGAAGTGCATAAA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTCAATGTATCTCGCATaGATGTCCGCAGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSMYLA*MSAASC
Trigger: GCAAGAGGCTGCGGACATTCATGCGAGATACATTGA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTCCTGTTTTCTCGGGTaGGATTGTCTATCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSCFLG*DCLSAL
Trigger: GAGCGCAGATAGACAATCTCACCCGAGAAAACAGGA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAACTGCTGTTTCCTCTaGGACATCTCTGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNNCCFL*DISEPV
Trigger: CACTGGCTCAGAGATGTCTCAGAGGAAACAGCAGTT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCAAGTGAGCCTGCTTaGCATTCTCCTGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSSEPA*HSPVPG
Trigger: TCCAGGAACAGGAGAATGTCAAGCAGGCTCACTTGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTCTCGATCTCACTCCTaGGACTGTTCTTTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSSRSHS*DCSFLA
Trigger: AGCGAGAAAAGAACAGTCTCAGGAGTGAGATCGAGA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCCACGAAGTTCTTCTaGCTATCTCGGGGATCGTTC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSTKFF*LSRGSF
Trigger: GAACGATCCCCGAGATAGTCAGAAGAACTTCGTGGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCTTGGAATAAAGAGATaGTGTTTCCGGTCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNLGIKR*CFRSQD
Trigger: ATCCTGAGACCGGAAACATCATCTCTTTATTCCAAG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCTGTTTCCTCATCTTTaGTGCATCTCTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNLFPHL*CISPSV
Trigger: AACTGAAGGAGAGATGCATCAAAGATGAGGAAACAG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCTGAGCGTGTTCTTCTaGGAAGTCTGCACCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNLSVFF*EVCTCF
Trigger: GAAACAGGTGCAGACTTCTCAGAAGAACACGCTCAG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACTGAGCGTGTTCTTCTaGGAAGTCTGCACCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKLSVFF*EVCTCF
Trigger: GAAACAGGTGCAGACTTCTCAGAAGAACACGCTCAG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTTTTGGCATAGCTGCTaGTGTCCTGCAACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQFWHSC*CPATSE
Trigger: CTCAGAGGTTGCAGGACATCAGCAGCTATGCCAAAA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGGAGCTACTGCTAAATaGATAGGAATAGGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLGATAK*IGIGVR
Trigger: TCTTACTCCTATTCCTATTCATTTAGCAGTAGCTCC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCTTCTCACACTGCCTTaGCTTCTGCAGCTGATCATA +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSLLTLP*LLQLII
Trigger: TATGATCAGCTGCAGAAGGCAAGGCAGTGTGAGAAG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCGAATCGTCTTCCTTCTaGATGGATATCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVESSSF*MDISLM
Trigger: CATCAAGGAGATATCCATGCAGAAGGAAGACGATTC...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCAATCTCCAGGCGCTaGTTCTTCTGCATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSISRR*FFCMVS
Trigger: GGAAACCATGCAGAAGAAGCAGCGCCTGGAGATTGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR GCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAAGCCTCGCCTTGTCTTaGTCCAGGACTTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSLALS*SRTLIF
Trigger: GAAGATCAAAGTCCTGGAGCAAGACAAGGCGAGGCT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAGGTCGTTCTGGATCTaGTGCTTCTCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNRSFWI*CFSHSR
Trigger: TCTGGAGTGTGAGAAGCAGCAGATCCAGAACGACCT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCCTCTAGCTTCCTCCTaGATCTCTCTTCGATCCTCT +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNPLASS*ISLRSS
Trigger: AGAGGATCGAAGAGAGATGCAGGAGGAAGCTAGAGG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACTCATAGAGCTGCATTaGCGTCACCTTCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKLIELH*RHLLPQ
Trigger: CTGAGGAAGAAGGTGACGGCAATGCAGCTCTATGAG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCTCATAGAGCTGCATTaGCGTCACCTTCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNLIELH*RHLLPQ
Trigger: CTGAGGAAGAAGGTGACGGCAATGCAGCTCTATGAG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTGGTCTCATTATATATaGCTGCTATGCAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLWSHYI*LLCSLN
Trigger: GTTCAAGCTGCATAGCAGGCATATATAATGAGACCA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTAATAAAGCCAGTAGCTaGTTGGGCTTCCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSNKASS*LGFQQL
Trigger: GAGTTGCTGGAAGCCCAAGCAGCTACTGGCTTTATT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGGAGACCCTGGTTGACTaGATCTTGAAGGGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQETLVD*ILKGEL
Trigger: AAGCTCTCCCTTCAAGATGCAGTCAACCAGGGTCTC...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTTTGACTGCCTCTGCTaGCGACATCTTCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSFDCLC*RHLLLS
Trigger: GGAAAGAAGAAGATGTCGGCAGCAGAGGCAGTCAAA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGGCTTCTGAGCGATGTTaGTGTTCTTGTCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQASERC*CSCRSS
Trigger: ACTGGAGCGACAAGAACACCAACATCGCTCAGAAGC...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATGCTCCAGCAGGTGCTaGAGAGGCATATTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKCSSRC*RGIFLS
Trigger: TGACAAGAATATGCCTCTCCAGCACCTGCTGGAGCA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGCTCAAGGTCTTCGATaGTCTTCATGTAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLAQGLR*SSCNLL
Trigger: AAGAAGATTACATGAAGACCATCGAAGACCTTGAGC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGGTTTGCAGAATAGCCTaGAGAAGGGCTCTCACGGAA +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQVCRIA*RRALTE
Trigger: TTCCGTGAGAGCCCTTCTCCAGGCTATTCTGCAAAC...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACAATCTCCAAACTTCATaGACTCTAAAGAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNNLQTS*TLKSPG
Trigger: GCCAGGACTCTTTAGAGTCCATGAAGTTTGGAGATT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTGCAATTTTCCGAGTTaGCATCCCGGGCCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNCNFPS*HPGPVL
Trigger: TAAGACTGGCCCGGGATGCCAACTCGGAAAATTGCA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAAGCTTGGCCTTGAACTaGGAACACTCTGCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSLALN*EHSAWY
Trigger: ATACCAGGCAGAGTGTTCCCAGTTCAAGGCCAAGCT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACGAGAGTCTGTCCATCTaGTTTCTGAGATTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNESLSI*FLRFLE
Trigger: TTCCAAGAATCTCAGAAACCAGATGGACAGACTCTC...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGGCACTTCCTCTCATTaGTTTCTTTGTCGACCAGCT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSGTSSH*FLCRPA
Trigger: AGCTGGTCGACAAAGAAACCAATGAGAGGAAGTGCC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTTGCTGATCTGCAGTTaGCTCCTTAGCTCGGAGATG +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNLLICS*LLSSEM
Trigger: CATCTCCGAGCTAAGGAGCCAACTGCAGATCAGCAA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATGGTTCAGGTCGTTCTaGATCTGCTGCTTCTCACAC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKWFRSF*ICCFSH
Trigger: GTGTGAGAAGCAGCAGATCCAGAACGACCTGAACCA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCATGACAGTGGATTCTaGGGTGATGAATTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLHDSGF*GDEFLS
Trigger: AGAAAGAAATTCATCACCCCAGAATCCACTGTCATG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGAGCTTCTCATTCCGATaGGGATCGATGATACCACCG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSFSFR*GSMIPP
Trigger: CGGTGGTATCATCGATCCCCATCGGAATGAGAAGCT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACCGCATCAGACAGTCTaGGCAATTTTGCAGCATTTC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKPHQTV*AILQHF
Trigger: GAAATGCTGCAAAATTGCTCAGACTGTCTGATGCGG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCCGCATCAGACAGTCTaGGCAATTTTGCAGCATTTC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQPHQTV*AILQHF
Trigger: GAAATGCTGCAAAATTGCTCAGACTGTCTGATGCGG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAAAGCTGGATGCTGATTaGGGACAAGCTGGTCACTTT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKKLDAD*GQAGHF
Trigger: AAAGTGACCAGCTTGTCCTCAATCAGCATCCAGCTT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGTTAACTCCTGTTCCTaGACCTTCAGTTTGCTCATG +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSVNSCS*TFSLLM
Trigger: CATGAGCAAACTGAAGGTTCAGGAACAGGAGTTAAC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCTATTTTACTCTCATTaGGGCTCCTGCTTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNLFYSH*GSCFCL
Trigger: AAGACAAAAGCAGGAGCCTCAATGAGAGTAAAATAG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCGATCAAATTCTTCTTaGTGGCTTCTGAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVRSNSS*WLLKQR
Trigger: TCTCTGTTTCAGAAGCCATCAAGAAGAATTTGATCG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAACAGAAGCTTCTCTTTaGACTCAATGCCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKTEASL*TQCPPD
Trigger: GTCTGGTGGGCATTGAGTTCAAAGAGAAGCTTCTGT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGACAGAAGCTTCTCTTTaGACTCAATGCCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQTEASL*TQCPPD
Trigger: GTCTGGTGGGCATTGAGTTCAAAGAGAAGCTTCTGT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAGCATGTCTTCCGTTTaGAGAATAGCCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSMSSV*RIAWRR
Trigger: CCTTCTCCAGGCTATTCTGCAAACGGAAGACATGCT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTGTTTATCTATCTTTTaGCAGCGGTCCGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQCLSIF*QRSVSW
Trigger: CCAGCTGACGGACCGCTGGCAAAAGATAGATAAACA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCATCATATAGCCACTTaGAGAAGCTCTGATAGTTGT +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNHHIAT*RSSDSC
Trigger: ACAACTATCAGAGCTTCTGCAAGTGGCTATATGATG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAGAACTGGGAACACTCTaGCTGGTATTTCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKELGTL*LVFLQV
Trigger: AACCTGCAGAAATACCAGGCAGAGTGTTCCCAGTTC...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATGGACGGTCTCAATATaGCAGAATCAACCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKWTVSI*QNQPVR
Trigger: CCGAACTGGTTGATTCTGGCATATTGAGACCGTCCA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCCGCTCTATACCTTCTaGGATCGAGATTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQPLYTF*DRDFLQ
Trigger: CTGGAGAAAATCTCGATCGCAGAAGGTATAGAGCGG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTTTGACTGCCTCTGCTaGCGACATCTTCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNFDCLC*RHLLLS
Trigger: GGAAAGAAGAAGATGTCGGCAGCAGAGGCAGTCAAA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCTCTTTGACTGCCTCTaGTGCCGACATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQLFDCL*CRHLLL
Trigger: AAGAAGAAGATGTCGGCAGCAGAGGCAGTCAAAGAG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTCGATCACTTTATTGTaGTTGACATCTTGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVSITLL*LTSWQV
Trigger: TACCTGCCAAGATGTCAACCACAATAAAGTGATCGA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTCGATCACTTTATTGTaGTTGACATCTTGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSITLL*LTSWQV
Trigger: TACCTGCCAAGATGTCAACCACAATAAAGTGATCGA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTGTCTAGGTTTTGCTTaGCTGACTTTCCATCGAGCT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSCLGFA*LTFHRA
Trigger: AGCTCGATGGAAAGTCAGCCAAGCAAAACCTAGACA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCCTTGTTCTTATCCTaGATGGTCTTGGCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSLFLS*MVLAAS
Trigger: TGACGCTGCCAAGACCATCCAGGATAAGAACAAGGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCATCAAATACCAGCTTaGAGGAATCAACGGTCCACT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSHQIPA*RNQRST
Trigger: AGTGGACCGTTGATTCCTCCAAGCTGGTATTTGATG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACCAGTTCGTTTACAGTaGACGGTCTCAATATGCCAG +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKPVRLQ*TVSICQ
Trigger: CTGGCATATTGAGACCGTCCACTGTAAACGAACTGG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGATGCAGCTTGAACCCTaGAGGAAGTCCTTGATTCTC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQMQLEP*RKSLIL
Trigger: GAGAATCAAGGACTTCCTCCAGGGTTCAAGCTGCAT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
3UTR CAA 72 bp CACACGGAAAATGACAAGCCAAATAAACAGAACACTTaGGCTAACAAAAAGCCAAGATTGCTGCTATTGTGG +
Preference number: 4 (lower is better)
Translates to: HTENDKPNKQNT*ANKKPRLLLLW
Trigger: CCACAATAGCAGCAATCTTGGCTTTTTGTTAGCCAAAGTGTTCTGTTTATTTGGCTTGTCATTTTCCGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATACCAAGTTCTGCACCTaGCGCTTGTATTCAATGATC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNTKFCT*RLYSMI
Trigger: GATCATTGAATACAAGCGTCAGGTGCAGAACTTGGT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATCACTTTATTGTGGTTaGCATCTTGGCAGGTACCCA +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSLYCG*HLGRYP
Trigger: TGGGTACCTGCCAAGATGTCAACCACAATAAAGTGA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTAATTCCTCAGTTGTTTaGTTTGTTTCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSNSSVV*FVSPGP
Trigger: GGGACCTGGAGAAACAAATCAAACAACTGAGGAATT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTCATAATCCTTAATTaGGTTTGCGCAAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVFIILN*VCAKFS
Trigger: GCTGAACTTTGCGCAAACTCAATTAAGGATTATGAA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGAGTGCACTGACTCTTTaGCTCCTGGATCCTATTAGA +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSALTL*LLDPIR
Trigger: TCTAATAGGATCCAGGAGTCAAAGAGTCAGTGCACT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCTTGGAATAAAGAGATaGTGTTTCCGGTCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSLGIKR*CFRSQD
Trigger: ATCCTGAGACCGGAAACATCATCTCTTTATTCCAAG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCTGTTTCCTCATCTTTaGTGCATCTCTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSLFPHL*CISPSV
Trigger: AACTGAAGGAGAGATGCATCAAAGATGAGGAAACAG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATCTCGATGTCAATCATaGAGTAGTGCCAAGACACCA +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSRCQS*SSAKTP
Trigger: TGGTGTCTTGGCACTACTGCATGATTGACATCGAGA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTCTCGATGTCAATCATaGAGTAGTGCCAAGACACCA +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSRCQS*SSAKTP
Trigger: TGGTGTCTTGGCACTACTGCATGATTGACATCGAGA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATGTAGAGCCTTGCTCTaGCAGCAGGAGATTTTTAAG +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKCRALL*QQEIFK
Trigger: CTTAAAAATCTCCTGCTGGCAGAGCAAGGCTCTACA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCTGTGCAGGTTCTTCTaGTCATTCAAAAACCGCATG +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNLCRFF*SFKNRM
Trigger: CATGCGGTTTTTGAATGAGCAGAAGAACCTGCACAG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAGTTCAGCGATTTTATaGACTTCTTCTGATTTGTCT +
Preference number: 4 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSSAIL*TSSDLS
Trigger: AGACAAATCAGAAGAAGTGCATAAAATCGCTGAACT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCCTGAACAACTTGAGTaGACTGACTCTTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNPEQLE*TDSLTP
Trigger: AGGAGTCAAAGAGTCAGTGCACTCAAGTTGTTCAGG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCCTGAACAACTTGAGTaGACTGACTCTTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQPEQLE*TDSLTP
Trigger: AGGAGTCAAAGAGTCAGTGCACTCAAGTTGTTCAGG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTATATATGCCTGCTATaGAGCTTGAACCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNYICLL*SLNPGG
Trigger: TCCTCCAGGGTTCAAGCTGCATAGCAGGCATATATA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGCAGCATTTCTTGGATaGTGTTCTGATTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSAAFLG*CSDSDV
Trigger: GACATCAGAATCAGAACACCATCCAAGAAATGCTGC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGCGTTTTCTTTGAGATaGACATCAATGCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSAFSLR*TSMHLV
Trigger: CACCAAGTGCATTGATGTCCATCTCAAAGAAAACGC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTAATCTCCAAACTTCATaGACTCTAAAGAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSNLQTS*TLKSPG
Trigger: GCCAGGACTCTTTAGAGTCCATGAAGTTTGGAGATT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTGTCTAGGTTTTGCTTaGCTGACTTTCCATCGAGCT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQCLGFA*LTFHRA
Trigger: AGCTCGATGGAAAGTCAGCCAAGCAAAACCTAGACA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTCCTTAGCTCGGAGATaGTTGAGTTTTTATCGCTGT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSSLARR*LSFYRC
Trigger: ACAGCGATAAAAACTCAACCATCTCCGAGCTAAGGA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCAAGGCGACATCTTTTaGCAAGAAGACACTGTTGAC +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNQGDIF*QEDTVD
Trigger: GTCAACAGTGTCTTCTTGCCAAAAGATGTCGCCTTG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGATCGAAAAAGCCTTTaGTATCATCACTTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSDRKSL*YHHLGL
Trigger: CAGACCCAAGTGATGATACCAAAGGCTTTTTCGATC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCGTTTTCTTCTGTGTTTaGATCGAAAAAGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KATELNEPLLLGFYCSYVVFFCV*IEKAFG
Trigger: ACCAAAGGCTTTTTCGATCCAAACACAGAAGAAAAC...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCCATGGAGCGATTCATaGCATCCTTGTAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQPWSDS*HPCRRF
Trigger: AAATCTCCTACAAGGATGCCATGAATCGCTCCATGG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAGCAGCGTTTTCTTTaGGATGGACATCAATGCACT +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNKQRFL*DGHQCT
Trigger: AGTGCATTGATGTCCATCTCAAAGAAAACGCTGCTT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAGACGCTTGTATTCAATaGTCTTCTCCCGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKDACIQ*SSPVLS
Trigger: AGAAAGAACGGGAGAAGATCATTGAATACAAGCGTC...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCATCCGAGACACCATTaGTATTTTCCAGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQHPRHH*YFPASE
Trigger: TTCAGAAGCTGGAAAATATCAATGGTGTCTCGGATG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCATTCAAAAACCGCATaGCTGTGTTGGAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQHSKTA*LCWNLQ
Trigger: TTGGAGATTCCAACACAGTCATGCGGTTTTTGAATG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTGTCCATCTGGTTTCTaGGATTCTTGGAATCGTCTT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQCPSGF*DSWNRL
Trigger: AAGACGATTCCAAGAATCTCAGAAACCAGATGGACA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCAGTTGCAGATAGGTaGGGTTTTCTTCTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSVADR*GFLLCL
Trigger: CAAACACAGAAGAAAACCTCACCTATCTGCAACTGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATCAGTTGCAGATAGGTaGGGTTTTCTTCTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSVADR*GFLLCL
Trigger: CAAACACAGAAGAAAACCTCACCTATCTGCAACTGA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCAGTCTGAGCAATTTTaGAGCATTTCTTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQQSEQF*SISWMV
Trigger: CACCATCCAAGAAATGCTGCAAAATTGCTCAGACTG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGCTGCACGATCTTCTTaGACTTGTTTACCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNAARSS*TCLPSS
Trigger: AGAACTTGGTAAACAAGTCCAAGAAGATCGTGCAGC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCTTCTATGGCCTTCTaGAAATGCTCATTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSSMAF*KCSFLK
Trigger: CTTGAGGAATGAGCATTTCCAGAAGGCCATAGAAGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCATGACAGTGGATTCTaGGGTGATGAATTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSHDSGF*GDEFLS
Trigger: AGAAAGAAATTCATCACCCCAGAATCCACTGTCATG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGGATCGAAAAAGCCTTTaGTATCATCACTTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQDRKSL*YHHLGL
Trigger: CAGACCCAAGTGATGATACCAAAGGCTTTTTCGATC...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATTTATGCACTTCTTCTaGTTTGTCTCGTTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKFMHFF*FVSFAR
Trigger: TCTGGCAAACGAGACAAATCAGAAGAAGTGCATAAA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCGATCAAATTCTTCTTaGTGGCTTCTGAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQRSNSS*WLLKQR
Trigger: TCTCTGTTTCAGAAGCCATCAAGAAGAATTTGATCG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR TCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGGAGCTACTGCTAAATaGATAGGAATAGGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNGATAK*IGIGVR
Trigger: TCTTACTCCTATTCCTATTCATTTAGCAGTAGCTCC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCATCATATAGCCACTTaGAGAAGCTCTGATAGTTGT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQHHIAT*RSSDSC
Trigger: ACAACTATCAGAGCTTCTGCAAGTGGCTATATGATG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGATGCCTCTAAAGCCTaGTTTTGGAATTTCTCAATT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSDASKA*FWNFSI
Trigger: AATTGAGAAATTCCAAAAGCAGGCTTTAGAGGCATC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAGCTCAAGGTCTTCGATaGTCTTCATGTAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKAQGLR*SSCNLL
Trigger: AAGAAGATTACATGAAGACCATCGAAGACCTTGAGC...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATGCTTTTGTCTTCTATaGCCTTCTGGAAATGCTCAT +
Preference number: 4 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKCFCLL*PSGNAH
Trigger: ATGAGCATTTCCAGAAGGCCATAGAAGACAAAAGCA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR TCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTTCATAATCCTTAATTaGGTTTGCGCAAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQFIILN*VCAKFS
Trigger: GCTGAACTTTGCGCAAACTCAATTAAGGATTATGAA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTAGTTCAGCGATTTTATaGACTTCTTCTGATTTGTCT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSSSAIL*TSSDLS
Trigger: AGACAAATCAGAAGAAGTGCATAAAATCGCTGAACT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGGAACTTATTCTTATTaGAATTTTCCGAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSGTYSY*NFPSWH
Trigger: ATGCCAACTCGGAAAATTGCAATAAGAATAAGTTCC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CCA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGTTTTCTTCTGTGTTTaGATCGAAAAAGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNVFFCV*IEKAFG
Trigger: ACCAAAGGCTTTTTCGATCCAAACACAGAAGAAAAC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR GCA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGGGAACTTATTCTTATTaGAATTTTCCGAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQGTYSY*NFPSWH
Trigger: ATGCCAACTCGGAAAATTGCAATAAGAATAAGTTCC...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp TCGCCCGTGAGGCGTTTGGTGAACTCGTCCCAGCCGGATCCACTCTaGCAAGTGTACCCTCCGGCTCCCTTGGAGCTGGCTCTTCGGACC +
Preference number: 5 (lower is better)
Translates to: SPVRRLVNSSQPDPL*QVYPPAPLELALRT
Trigger: GGTCCGAAGAGCCAGCTCCAAGGGAGCCGGAGGGTACACTTGCCAGAGTGGATCCGGCTGGGACGAGTTCACCAAACGCCTCACGGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp AGGCGCTGCTTCTTCTGCATGGTTTCCGAGCCACAGGCTTTCTGCTaGAGGGCGTTCTCCTCGGCTCTCCTTCGCTGCTCCGTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: RRCFFCMVSEPQAFC*RAFSSALLRCSVAC
Trigger: GCAGGCCACGGAGCAGCGAAGGAGAGCCGAGGAGAACGCCCTGCAGCAGAAAGCCTGTGGCTCGGAAACCATGCAGAAGAAGCAGCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 90 bp TCCAGGCGCTGCTTCTTCTGCATGGTTTCCGAGCCACAGGCTTTCTaGTGCAGGGCGTTCTCCTCGGCTCTCCTTCGCTGCTCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: SRRCFFCMVSEPQAF*CRAFSSALLRCSVA
Trigger: GGCCACGGAGCAGCGAAGGAGAGCCGAGGAGAACGCCCTGCAGCAGAAAGCCTGTGGCTCGGAAACCATGCAGAAGAAGCAGCGCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 90 bp CCACCAAAGAGTACTTTTCCTTGGGAGAAGCGGAAGCCCCGGCGATaGCGCCTGCGCCGCGCAGGAAAGGCTGGATCTCTGAGGCCACCT +
Preference number: 5 (lower is better)
Translates to: PPKSTFPWEKRKPRR*RLRRAGKAGSLRPP
Trigger: AGGTGGCCTCAGAGATCCAGCCTTTCCTGCGCGGCGCAGGCGCCATCGCCGGGGCTTCCGCTTCTCCCAAGGAAAAGTACTCTTTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp CTCACACTCCAGACGCTGTTTCACCCGGCTTTCTGCCTCCAGCGTTaGTTTGGCACGGTTCAGCTCATCCTCCAGCCGCTGCAGCCTCGC +
Preference number: 5 (lower is better)
Translates to: LTLQTLFHPAFCLQR*FGTVQLILQPLQPR
Trigger: GCGAGGCTGCAGCGGCTGGAGGATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGCAGAAAGCCGGGTGAAACAGCGTCTGGAGTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp CGGGATGATCAGGCCCACGGAAGGGACAAGCATGTCCACGCCTCCTaGGCCCGTCACGTACCACTTGCTGCGCTCGTTGTTGTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: RDDQAHGRDKHVHAS*ARHVPLAALVVVLQ
Trigger: CTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCAGGAGGCGTGGACATGCTTGTCCCTTCCGTGGGCCTGATCATCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp CAATCTTGCAAGAAAGGTCCACAGCCAGTGGGTTCGGAGGCGGGATaGTCAGGCCCACGGAAGGGACAAGCATGTCCACGCCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: QSCKKGPQPVGSEAG*SGPRKGQACPRLLG
Trigger: GCCCAGGAGGCGTGGACATGCTTGTCCCTTCCGTGGGCCTGATCATCCCGCCTCCGAACCCACTGGCTGTGGACCTTTCTTGCAAGATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp CTTGGCAGCCTCCTCCAGGGACTGCTTGTGCCTGGCGTTGTCCTCTaGGCGCTGCTGGATGACCTGCTTCAGTTCAATCTCCAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: LGSLLQGLLVPGVVL*ALLDDLLQFNLQAL
Trigger: CAGCGCCTGGAGATTGAACTGAAGCAGGTCATCCAGCAGCGCTCAGAGGACAACGCCAGGCACAAGCAGTCCCTGGAGGAGGCTGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 90 bp ACTCCAGACGCTGTTTCACCCGGCTTTCTGCCTCCAGCGTTGCTTTaGCACGGTTCAGCTCATCCTCCAGCCGCTGCAGCCTCGCCTTGT +
Preference number: 5 (lower is better)
Translates to: TPDAVSPGFLPPALL*HGSAHPPAAAASPC
Trigger: ACAAGGCGAGGCTGCAGCGGCTGGAGGATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGCAGAAAGCCGGGTGAAACAGCGTCTGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp CGTATTCCGTCTGGGTCTCCCGATGGGACCCGTAGGGGCGCTGCCTaGGTTTCTCGATCTCCTTCTGAAGCCTGCAGCGTTCGGATTCCA +
Preference number: 5 (lower is better)
Translates to: RIPSGSPDGTRRGAA*VSRSPSEACSVRIP
Trigger: TGGAATCCGAACGCTGCAGGCTTCAGAAGGAGATCGAGAAACTCAGGCAGCGCCCCTACGGGTCCCATCGGGAGACCCAGACGGAATACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp GCCTCCTCCAGGGACTGCTTGTGCCTGGCGTTGTCCTCTGAGCGCTaGTGGATGACCTGCTTCAGTTCAATCTCCAGGCGCTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: ASSRDCLCLALSSER*WMTCFSSISRRCFF
Trigger: GAAGAAGCAGCGCCTGGAGATTGAACTGAAGCAGGTCATCCAGCAGCGCTCAGAGGACAACGCCAGGCACAAGCAGTCCCTGGAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 90 bp GCCTCCAGCGTTGCTTTGGCACGGTTCAGCTCATCCTCCAGCCGCTaGAGCCTCGCCTTGTCTTGCTCCAGGACTTTGATCTTCACCAGC +
Preference number: 5 (lower is better)
Translates to: ASSVALARFSSSSSR*SLALSCSRTLIFTS
Trigger: GCTGGTGAAGATCAAAGTCCTGGAGCAAGACAAGGCGAGGCTGCAGCGGCTGGAGGATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp CCACAGGCTTTCTGCTGCAGGGCGTTCTCCTCGGCTCTCCTTCGCTaGTCCGTGGCCTGCAAGATGCTGTCATTGAGCCTGACTATCTCA +
Preference number: 5 (lower is better)
Translates to: PQAFCCRAFSSALLR*SVACKMLSLSLTIS
Trigger: TGAGATAGTCAGGCTCAATGACAGCATCTTGCAGGCCACGGAGCAGCGAAGGAGAGCCGAGGAGAACGCCCTGCAGCAGAAAGCCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 90 bp GTCCTCTGCTTCTCCCTCACGTGGCCATCCAGCACATCCCTCTGCTaGCTGAGGTCATCCTCGCTCCTCTTCTTAACAATGGACGCCTGC +
Preference number: 5 (lower is better)
Translates to: VLCFSLTWPSSTSLC*LRSSSLLFLTMDAC
Trigger: GCAGGCGTCCATTGTTAAGAAGAGGAGCGAGGATGACCTCAGGCAGCAGAGGGATGTGCTGGATGGCCACGTGAGGGAGAAGCAGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 90 bp TGGGTCCTCTGCTTCTCCCTCACGTGGCCATCCAGCACATCCCTCTaGTGCCTGAGGTCATCCTCGCTCCTCTTCTTAACAATGGACGCC +
Preference number: 5 (lower is better)
Translates to: WVLCFSLTWPSSTSL*CLRSSSLLFLTMDA
Trigger: GGCGTCCATTGTTAAGAAGAGGAGCGAGGATGACCTCAGGCAGCAGAGGGATGTGCTGGATGGCCACGTGAGGGAGAAGCAGAGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 90 bp GATCTGCTGCTTCTCACACTCCAGACGCTGTTTCACCCGGCTTTCTaGCTCCAGCGTTGCTTTGGCACGGTTCAGCTCATCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: DLLLLTLQTLFHPAF*LQRCFGTVQLILQP
Trigger: CGGCTGGAGGATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGCAGAAAGCCGGGTGAAACAGCGTCTGGAGTGTGAGAAGCAGCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp CTGTCGGAGCTCGATCTCCAACTGCTGTTTCCTCTGAGACATCTCTaGGCCAGTGGCCTTCTGCTGCTGGGCGTTCTCTTCGACCCTCCT +
Preference number: 5 (lower is better)
Translates to: LSELDLQLLFPLRHL*ASGLLLLGVLFDPP
Trigger: AGGAGGGTCGAAGAGAACGCCCAGCAGCAGAAGGCCACTGGCTCAGAGATGTCTCAGAGGAAACAGCAGTTGGAGATCGAGCTCCGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 90 bp GACGCCTGCTCCAGCTGCTGGGTCAGGTTGGTGATTTTGACGGCTTaGTCTTTCAAAGACCTCCTCATGGCCTCCAGTTCCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: DACSSCWVRLVILTA*SFKDLLMASSSSSS
Trigger: GCTGGAGGAGGAACTGGAGGCCATGAGGAGGTCTTTGAAAGAGCAAGCCGTCAAAATCACCAACCTGACCCAGCAGCTGGAGCAGGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 90 bp TGCTGCTGGGCGTTCTCTTCGACCCTCCTGAGGTTCTCGGTGGTCTaGGCTAGAGTGTTCTTCAGCCTCTTGACCTCCTCACACAAGCTC +
Preference number: 5 (lower is better)
Translates to: CCWAFSSTLLRFSVV*ARVFFSLLTSSHKL
Trigger: GAGCTTGTGTGAGGAGGTCAAGAGGCTGAAGAACACTCTAGCCCAGACCACCGAGAACCTCAGGAGGGTCGAAGAGAACGCCCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 90 bp CTTCTATGGCCTTCTGGAAATGCTCATTCCTCAAGTGAGCCTGCTTaGCATTCTCCTGTTCCTGGACCAGCTGCCGCCGGAGGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: LLWPSGNAHSSSEPA*HSPVPGPAAAGGPR
Trigger: TCGAGGCCCTCCGGCGGCAGCTGGTCCAGGAACAGGAGAATGTCAAGCAGGCTCACTTGAGGAATGAGCATTTCCAGAAGGCCATAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 90 bp CATCCTCCAGCCGCTGCAGCCTCGCCTTGTCTTGCTCCAGGACTTTaGTCTTCACCAGCAGGCTCTCTCTCTCCTGAACAACTTGAGTGC +
Preference number: 5 (lower is better)
Translates to: HPPAAAASPCLAPGL*SSPAGSLSPEQLEC
Trigger: GCACTCAAGTTGTTCAGGAGAGAGAGAGCCTGCTGGTGAAGATCAAAGTCCTGGAGCAAGACAAGGCGAGGCTGCAGCGGCTGGAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp AACCCTTCGAGGACACGGAGGCGGCTTCCAGAAGGCGCAACCCAGTaGTGTCTTCCACCATGGAGCGATTCATGGCATCCTTGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: NPSRTRRRLPEGATQ*CLPPWSDSWHPCRR
Trigger: TCTCCTACAAGGATGCCATGAATCGCTCCATGGTGGAAGACATCACTGGGTTGCGCCTTCTGGAAGCCGCCTCCGTGTCCTCGAAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp TGCTGGATGACCTGCTTCAGTTCAATCTCCAGGCGCTGCTTCTTCTaGATGGTTTCCGAGCCACAGGCTTTCTGCTGCAGGGCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: CWMTCFSSISRRCFF*MVSEPQAFCCRAFS
Trigger: GGAGAACGCCCTGCAGCAGAAAGCCTGTGGCTCGGAAACCATGCAGAAGAAGCAGCGCCTGGAGATTGAACTGAAGCAGGTCATCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 90 bp TCTGAGCGCTGCTGGATGACCTGCTTCAGTTCAATCTCCAGGCGCTaGTTCTTCTGCATGGTTTCCGAGCCACAGGCTTTCTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SERCWMTCFSSISRR*FFCMVSEPQAFCCR
Trigger: CCTGCAGCAGAAAGCCTGTGGCTCGGAAACCATGCAGAAGAAGCAGCGCCTGGAGATTGAACTGAAGCAGGTCATCCAGCAGCGCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 90 bp TCGATGAAACCTTTGCGGATGGCTTCTTCGGTGCTGATCCTCCCATaGACTTCCGGGTCAACAAGGCCTCCCGTGAGGAACTGGAACTCC +
Preference number: 5 (lower is better)
Translates to: SMKPLRMASSVLILP*TSGSTRPPVRNWNS
Trigger: GGAGTTCCAGTTCCTCACGGGAGGCCTTGTTGACCCGGAAGTGCATGGGAGGATCAGCACCGAAGAAGCCATCCGCAAAGGTTTCATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp TCCTCCTCGCAGTCATTGATCCACATGATCTCTCGAGAGGTGGCCTaGATGATGTTCTGCAGCTGGCGCAGGTGGTCCATCCTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: SSSQSLIHMISREVA*MMFCSWRRWSILSK
Trigger: CTTCGAGAGGATGGACCACCTGCGCCAGCTGCAGAACATCATCCAGGCCACCTCTCGAGAGATCATGTGGATCAATGACTGCGAGGAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp AAGACCTCCTCATGGCCTCCAGTTCCTCCTCCAGCATCTTCCTCTTaGAGGACTCGTCGGAGGCTGTTCTCTTCAGCCTACTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: KTSSWPPVPPPASSS*RTRRRLFSSAYSAP
Trigger: AGGAGCTGAGTAGGCTGAAGAGAACAGCCTCCGACGAGTCCTCCAAGAGGAAGATGCTGGAGGAGGAACTGGAGGCCATGAGGAGGTCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 90 bp TCAGCCCACGGGCCAAGGCGACATCTTTTGGCAAGAAGACACTGTTaGCTGGATCAACTACACCCCCTGAAGCAAGCTGGGCTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SAHGPRRHLLARRHC*LDQLHPLKQAGLPA
Trigger: TGCTGGAAGCCCAGCTTGCTTCAGGGGGTGTAGTTGATCCAGTCAACAGTGTCTTCTTGCCAAAAGATGTCGCCTTGGCCCGTGGGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp TCATTGATCCACATGATCTCTCGAGAGGTGGCCTGGATGATGTTCTaGAGCTGGCGCAGGTGGTCCATCCTCTCGAAGGAGGCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: SLIHMISREVAWMMF*SWRRWSILSKEAFS
Trigger: GCTGAAAGCCTCCTTCGAGAGGATGGACCACCTGCGCCAGCTGCAGAACATCATCCAGGCCACCTCTCGAGAGATCATGTGGATCAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp GGACAAGCATGTCCACGCCTCCTGGGCCCGTCACGTACCACTTGCTaGGCTCGTTGTTGTCCTTCAGAATACACTCATCCCCTTTGTGTA +
Preference number: 5 (lower is better)
Translates to: GQACPRLLGPSRTTC*ARCCPSEYTHPLCV
Trigger: TACACAAAGGGGATGAGTGTATTCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCAGGAGGCGTGGACATGCTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp AAGGGACAAGCATGTCCACGCCTCCTGGGCCCGTCACGTACCACTTaGTGCGCTCGTTGTTGTCCTTCAGAATACACTCATCCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: KGQACPRLLGPSRTT*CARCCPSEYTHPLC
Trigger: ACAAAGGGGATGAGTGTATTCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCAGGAGGCGTGGACATGCTTGTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp GTCATAGAGCGGGTACTGCTGAGAGGACTGGGAGTGGATCTGCTGTaGCTTCTGCAGCTCCGTCTTCATGGTGGCCAACAGCGACTTTTT +
Preference number: 5 (lower is better)
Translates to: VIERVLLRGLGVDLL*LLQLRLHGGQQRLF
Trigger: AAAAAGTCGCTGTTGGCCACCATGAAGACGGAGCTGCAGAAGGCACAGCAGATCCACTCCCAGTCCTCTCAGCAGTACCCGCTCTATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp TGCTGCAGGGCGTTCTCCTCGGCTCTCCTTCGCTGCTCCGTGGCCTaGAAGATGCTGTCATTGAGCCTGACTATCTCATCCTTAAGATCT +
Preference number: 5 (lower is better)
Translates to: CCRAFSSALLRCSVA*KMLSLSLTISSLRS
Trigger: AGATCTTAAGGATGAGATAGTCAGGCTCAATGACAGCATCTTGCAGGCCACGGAGCAGCGAAGGAGAGCCGAGGAGAACGCCCTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 90 bp TGCTGCCTGAGGTCATCCTCGCTCCTCTTCTTAACAATGGACGCCTaGTCCAGCTGCTGGGTCAGGTTGGTGATTTTGACGGCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: CCLRSSSLLFLTMDA*SSCWVRLVILTACS
Trigger: AGAGCAAGCCGTCAAAATCACCAACCTGACCCAGCAGCTGGAGCAGGCGTCCATTGTTAAGAAGAGGAGCGAGGATGACCTCAGGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 90 bp ATCCACATGATCTCTCGAGAGGTGGCCTGGATGATGTTCTGCAGCTaGCGCAGGTGGTCCATCCTCTCGAAGGAGGCTTTCAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: IHMISREVAWMMFCS*RRWSILSKEAFSRF
Trigger: AAACCTGCTGAAAGCCTCCTTCGAGAGGATGGACCACCTGCGCCAGCTGCAGAACATCATCCAGGCCACCTCTCGAGAGATCATGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp GGCTTCATAGTACTGCTCAATCTTGCAAGAAAGGTCCACAGCCAGTaGGTTCGGAGGCGGGATGATCAGGCCCACGGAAGGGACAAGCAT +
Preference number: 5 (lower is better)
Translates to: GFIVLLNLARKVHSQ*VRRRDDQAHGRDKH
Trigger: ATGCTTGTCCCTTCCGTGGGCCTGATCATCCCGCCTCCGAACCCACTGGCTGTGGACCTTTCTTGCAAGATTGAGCAGTACTATGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp TCCGGGTCAACTATGACCACCCGCCGCTTTCTGAGCGTGTTCTTCTaGGAAGTCTGCACCTGTTTCTTCTTCTCTTTCAGGGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SGSTMTTRRFLSVFF*EVCTCFFFSFRGSR
Trigger: CCTGCTGCCCCTGAAAGAGAAGAAGAAACAGGTGCAGACTTCTCAGAAGAACACGCTCAGAAAGCGGCGGGTGGTCATAGTTGACCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp CTGCTGCCGACATCTTCTTCTTTCCTTTTACCCCTTCAAAGCCGATaGAGGCCTTCTGGGCAGGCTTCAGCCTGGTGGCCATGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: LLPTSSSFLLPLQSR*RPSGQASAWWPCLG
Trigger: ACCAAGACATGGCCACCAGGCTGAAGCCTGCCCAGAAGGCCTTCATCGGCTTTGAAGGGGTAAAAGGAAAGAAGAAGATGTCGGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp AGCGTCATCCTGGCCTCACAATGCTCCATCTGCCTGCGGATCTTCTaGAGCTCCATCAGCAACCATGTCTCCTGTTTGTCGTTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: SVILASQCSICLRIF*SSISNHVSCLSFSR
Trigger: CCGAGAAAACGACAAACAGGAGACATGGTTGCTGATGGAGCTGCAGAAGATCCGCAGGCAGATGGAGCATTGTGAGGCCAGGATGACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp GGTGAGGATTTTGGCATAGCTGCTGATGTCCTGCAACCTCTGAGCTaGACGGCCATCGATGAAACCTTTGCGGATGGCTTCTTCGGTGCT +
Preference number: 5 (lower is better)
Translates to: GEDFGIAADVLQPLS*TAIDETFADGFFGA
Trigger: AGCACCGAAGAAGCCATCCGCAAAGGTTTCATCGATGGCCGTGCAGCTCAGAGGTTGCAGGACATCAGCAGCTATGCCAAAATCCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp ATCTCTCGAGAGGTGGCCTGGATGATGTTCTGCAGCTGGCGCAGGTaGTCCATCCTCTCGAAGGAGGCTTTCAGCAGGTTTTCATATTCC +
Preference number: 5 (lower is better)
Translates to: ISREVAWMMFCSWRR*SILSKEAFSRFSYS
Trigger: GGAATATGAAAACCTGCTGAAAGCCTCCTTCGAGAGGATGGACCACCTGCGCCAGCTGCAGAACATCATCCAGGCCACCTCTCGAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp CTCATGGCCTCCGTGGCGCTGTTGTTGGCTTTCTGCAGGTCATACTaGACTCTCTGCAACTTGGAATTTTCGTCCTCCAGGCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: LMASVALLLAFCRSY*TLCNLEFSSSRHFL
Trigger: GAGGAAGTGCCTGGAGGACGAAAATTCCAAGTTGCAGAGAGTCCAGTATGACCTGCAGAAAGCCAACAACAGCGCCACGGAGGCCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 90 bp AGCTTCTCATTCCGATGGGGATCGATGATACCACCGGTGGCTGCCTaGGCCTCCAGAAGCATGACAGTGGATTCTGGGGTGATGAATTTC +
Preference number: 5 (lower is better)
Translates to: SFSFRWGSMIPPVAA*ASRSMTVDSGVMNF
Trigger: GAAATTCATCACCCCAGAATCCACTGTCATGCTTCTGGAGGCCCAGGCAGCCACCGGTGGTATCATCGATCCCCATCGGAATGAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp CCAGAATCAACCAGTTCGGTGACGGTCACGGGTTGTCTGATTCCCTaGAAGGACATGCTTCTCTTCTGTACTGACAGCAGGAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: PESTSSVTVTGCLIP*KDMLLFCTDSRSRP
Trigger: GGGTCTGCTCCTGCTGTCAGTACAGAAGAGAAGCATGTCCTTCCAGGGAATCAGACAACCCGTGACCGTCACCGAACTGGTTGATTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp CGATCGAGATTTTCTCCAGGTTCTCTGTGTCAAAGATGGCCGCAATaGGGCTTGACTCCTCCAGAGGGTCTGACAGAGAGCTGCTTCGGA +
Preference number: 5 (lower is better)
Translates to: RSRFSPGSLCQRWPQ*GLTPPEGLTESCFG
Trigger: TCCGAAGCAGCTCTCTGTCAGACCCTCTGGAGGAGTCAAGCCCCATTGCGGCCATCTTTGACACAGAGAACCTGGAGAAAATCTCGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp GCAGGTGCTGGAGAGGCATATTCTTGTCACAGGGGTATTTCTTCCTaGTGGAGTCCTGCAGGCCCTTCAGGTAGGCTTCAGTTGACTGAG +
Preference number: 5 (lower is better)
Translates to: AGAGEAYSCHRGISS*WSPAGPSGRLQLTE
Trigger: CTCAGTCAACTGAAGCCTACCTGAAGGGCCTGCAGGACTCCATCAGGAAGAAATACCCCTGTGACAAGAATATGCCTCTCCAGCACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp TATCTATCTTTTGCCAGCGGTCCGTCAGCTGGGTCACTTTCTCAGTaGATTTGCCCAGGTCCAGGTCATAGAGCGGGTACTGCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: YLSFASGPSAGSLSQ*ICPGPGHRAGTAER
Trigger: CCTCTCAGCAGTACCCGCTCTATGACCTGGACCTGGGCAAATTCACTGAGAAAGTGACCCAGCTGACGGACCGCTGGCAAAAGATAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp CGAGGGACTGCTTGTACCTCATGCTCTCTTCAGTTCGCATCTGAGTaGCCTGTCGGAGCTCGATCTCCAACTGCTGTTTCCTCTGAGACA +
Preference number: 5 (lower is better)
Translates to: RGTACTSCSLQFASE*PVGARSPTAVSSET
Trigger: TGTCTCAGAGGAAACAGCAGTTGGAGATCGAGCTCCGACAGGTCACTCAGATGCGAACTGAAGAGAGCATGAGGTACAAGCAGTCCCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 90 bp CTGCTTTTGTCTTCTATGGCCTTCTGGAAATGCTCATTCCTCAAGTaGGCCTGCTTGACATTCTCCTGTTCCTGGACCAGCTGCCGCCGG +
Preference number: 5 (lower is better)
Translates to: LLLSSMAFWKCSFLK*ACLTFSCSWTSCRR
Trigger: CCGGCGGCAGCTGGTCCAGGAACAGGAGAATGTCAAGCAGGCTCACTTGAGGAATGAGCATTTCCAGAAGGCCATAGAAGACAAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 90 bp TGCTCTGCCAGCAGGAGATTTTTAAGCGTCATCCTGGCCTCACAATaGTCCATCTGCCTGCGGATCTTCTGCAGCTCCATCAGCAACCAT +
Preference number: 5 (lower is better)
Translates to: CSASRRFLSVILASQ*SICLRIFCSSISNH
Trigger: ATGGTTGCTGATGGAGCTGCAGAAGATCCGCAGGCAGATGGAGCATTGTGAGGCCAGGATGACGCTTAAAAATCTCCTGCTGGCAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp AGTCAATCCGTAGGCGCGTTAACTCCTGTTCCTGAACCTTCAGTTTaGTCATGGCCTCCGTGGCGCTGTTGTTGGCTTTCTGCAGGTCAT +
Preference number: 5 (lower is better)
Translates to: SQSVGALTPVPEPSV*SWPPWRCCWLSAGH
Trigger: ATGACCTGCAGAAAGCCAACAACAGCGCCACGGAGGCCATGAGCAAACTGAAGGTTCAGGAACAGGAGTTAACGCGCCTACGGATTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 90 bp CCTCTGACCGGTGATGCTATCCACAATGCCCCGCTCTATACCTTCTaGGATCGAGATTTTCTCCAGGTTCTCTGTGTCAAAGATGGCCGC +
Preference number: 5 (lower is better)
Translates to: PLTGDAIHNAPLYTF*DRDFLQVLCVKDGR
Trigger: GCGGCCATCTTTGACACAGAGAACCTGGAGAAAATCTCGATCGCAGAAGGTATAGAGCGGGGCATTGTGGATAGCATCACCGGTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp GCGCTGGCCTGCCTCGTAGGGAAGCCATTTCTCTTTGACTGCCTCTaGTGCCGACATCTTCTTCTTTCCTTTTACCCCTTCAAAGCCGAT +
Preference number: 5 (lower is better)
Translates to: ALACLVGKPFLFDCL*CRHLLLSFYPFKAD
Trigger: ATCGGCTTTGAAGGGGTAAAAGGAAAGAAGAAGATGTCGGCAGCAGAGGCAGTCAAAGAGAAATGGCTTCCCTACGAGGCAGGCCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp GCGTTAACTCCTGTTCCTGAACCTTCAGTTTGCTCATGGCCTCCGTaGCGCTGTTGTTGGCTTTCTGCAGGTCATACTGGACTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: ALTPVPEPSVCSWPP*RCCWLSAGHTGLSA
Trigger: TGCAGAGAGTCCAGTATGACCTGCAGAAAGCCAACAACAGCGCCACGGAGGCCATGAGCAAACTGAAGGTTCAGGAACAGGAGTTAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 90 bp ATCAGCCCCTGCAGCTCGAGGGTTCGATTGTTGCTGATCTGCAGTTaGCTCCTTAGCTCGGAGATGGTTGAGTTTTTATCGCTGTCCGCT +
Preference number: 5 (lower is better)
Translates to: ISPCSSRVRLLLICS*LLSSEMVEFLSLSA
Trigger: AGCGGACAGCGATAAAAACTCAACCATCTCCGAGCTAAGGAGCCAACTGCAGATCAGCAACAATCGAACCCTCGAGCTGCAGGGGCTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 90 bp TCTAGCTTCCTCCTGCATCTCTCTTCGATCCTCTTGATCTCCGCCTaGAGCCTCTCGATCTCACTCCTGAGACTGTTCTTTTCTCGCTCG +
Preference number: 5 (lower is better)
Translates to: SSFLLHLSSILLISA*SLSISLLRLFFSRS
Trigger: CGAGCGAGAAAAGAACAGTCTCAGGAGTGAGATCGAGAGGCTCCAGGCGGAGATCAAGAGGATCGAAGAGAGATGCAGGAGGAAGCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp ACCACCGGTGGCTGCCTGGGCCTCCAGAAGCATGACAGTGGATTCTaGGGTGATGAATTTCTTTCTCTTGGCCTCCACCAAAGAGTACTT +
Preference number: 5 (lower is better)
Translates to: TTGGCLGLQKHDSGF*GDEFLSLGLHQRVL
Trigger: AAGTACTCTTTGGTGGAGGCCAAGAGAAAGAAATTCATCACCCCAGAATCCACTGTCATGCTTCTGGAGGCCCAGGCAGCCACCGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp AGCCTTAAATTGCTGACGGGATCCACAATAAAGCCAGTAGCTGCTTaGGCTTCCAGCAACTCCAGGGCGGTACCAGGTCGAACTAAGCCT +
Preference number: 5 (lower is better)
Translates to: SLKLLTGSTIKPVAA*ASSNSRAVPGRTKP
Trigger: AGGCTTAGTTCGACCTGGTACCGCCCTGGAGTTGCTGGAAGCCCAAGCAGCTACTGGCTTTATTGTGGATCCCGTCAGCAATTTAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp TACCTTCTGCGATCGAGATTTTCTCCAGGTTCTCTGTGTCAAAGATaGCCGCAATGGGGCTTGACTCCTCCAGAGGGTCTGACAGAGAGC +
Preference number: 5 (lower is better)
Translates to: YLLRSRFSPGSLCQR*PQWGLTPPEGLTES
Trigger: GCTCTCTGTCAGACCCTCTGGAGGAGTCAAGCCCCATTGCGGCCATCTTTGACACAGAGAACCTGGAGAAAATCTCGATCGCAGAAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGATGCGACCCAGCGTGTaGATCCGCGGGTGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLMRPSV*IRGWEP
Trigger: CGGCTCCCACCCGCGGATCAACACGCTGGGTCGCAT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp CCTCCAGAGGGTCTGACAGAGAGCTGCTTCGGATGGTTAGATTTCTaGCACTGGATATGGTGGAAATCTTACTCACGGAGTCGTGTCGGG +
Preference number: 5 (lower is better)
Translates to: PPEGLTESCFGWLDF*HWIWWKSYSRSRVG
Trigger: CCCGACACGACTCCGTGAGTAAGATTTCCACCATATCCAGTGTCAGAAATCTAACCATCCGAAGCAGCTCTCTGTCAGACCCTCTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp TTTGCCAGCTCATTTTCATACTCTCTCTTCCGGGCGCCCTCTTCCTaGAGCAGAACCCTCAACCTCTCTATCTCGTACTCCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: FASSFSYSLFRAPSS*SRTLNLSISYSFSL
Trigger: CAAGGAGAAGGAGTACGAGATAGAGAGGTTGAGGGTTCTGCTGCAGGAAGAGGGCGCCCGGAAGAGAGAGTATGAAAATGAGCTGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp ACCTTCAGTTTGCTCATGGCCTCCGTGGCGCTGTTGTTGGCTTTCTaGAGGTCATACTGGACTCTCTGCAACTTGGAATTTTCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: TFSLLMASVALLLAF*RSYWTLCNLEFSSS
Trigger: GGAGGACGAAAATTCCAAGTTGCAGAGAGTCCAGTATGACCTGCAGAAAGCCAACAACAGCGCCACGGAGGCCATGAGCAAACTGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 90 bp CTTCAGCCTGGTGGCCATGTCTTGGTCAATGAGACCCTGGTTGACTaGATCTTGAAGGGAGAGCTTCTGACCAGTGGTAGGGTGAATGAT +
Preference number: 5 (lower is better)
Translates to: LQPGGHVLVNETLVD*ILKGELLTSGRVND
Trigger: ATCATTCACCCTACCACTGGTCAGAAGCTCTCCCTTCAAGATGCAGTCAACCAGGGTCTCATTGACCAAGACATGGCCACCAGGCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp GTCGCAGAGAGCCCTGAGGATAATGGGCTTGTTGCTCCTGTAGTCTaGGTTCCGAGGTTTCAGCTGCACGATCTTCTTGGACTTGTTTAC +
Preference number: 5 (lower is better)
Translates to: VAESPEDNGLVAPVV*VPRFQLHDLLGLVY
Trigger: GTAAACAAGTCCAAGAAGATCGTGCAGCTGAAACCTCGGAACCCAGACTACAGGAGCAACAAGCCCATTATCCTCAGGGCTCTCTGCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp ATCTTCTTCTTTCCTTTTACCCCTTCAAAGCCGATGAAGGCCTTCTaGGCAGGCTTCAGCCTGGTGGCCATGTCTTGGTCAATGAGACCC +
Preference number: 5 (lower is better)
Translates to: IFFFPFTPSKPMKAF*AGFSLVAMSWSMRP
Trigger: GGGTCTCATTGACCAAGACATGGCCACCAGGCTGAAGCCTGCCCAGAAGGCCTTCATCGGCTTTGAAGGGGTAAAAGGAAAGAAGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp TTTCAGTTCCGGCTGCGCGATCAGCTCCGCCCGCATCAGACAGTCTaGGCAATTTTGCAGCATTTCTTGGATGGTGTTCTGATTCTGATG +
Preference number: 5 (lower is better)
Translates to: FQFRLRDQLRPHQTV*AILQHFLDGVLILM
Trigger: CATCAGAATCAGAACACCATCCAAGAAATGCTGCAAAATTGCTCAGACTGTCTGATGCGGGCGGAGCTGATCGCGCAGCCGGAACTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp GAGCTCGTTGATTTTCACGGTGATGTGGTGTGTAGAGCCTTGCTCTaGCAGCAGGAGATTTTTAAGCGTCATCCTGGCCTCACAATGCTC +
Preference number: 5 (lower is better)
Translates to: ELVDFHGDVVCRALL*QQEIFKRHPGLTML
Trigger: GAGCATTGTGAGGCCAGGATGACGCTTAAAAATCTCCTGCTGGCAGAGCAAGGCTCTACACACCACATCACCGTGAAAATCAACGAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp AGACTCCAGCTTCTGCCAGCTGAGGTTCTCCTTCTCACACTGCCTTaGCTTCTGCAGCTGATCATAGTCATTCTTCTGTTGGTCGAACCT +
Preference number: 5 (lower is better)
Translates to: RLQLLPAEVLLLTLP*LLQLIIVILLLVEP
Trigger: AGGTTCGACCAACAGAAGAATGACTATGATCAGCTGCAGAAGGCAAGGCAGTGTGAGAAGGAGAACCTCAGCTGGCAGAAGCTGGAGTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp CTGGCCTGCCTCGTAGGGAAGCCATTTCTCTTTGACTGCCTCTGCTaGCGACATCTTCTTCTTTCCTTTTACCCCTTCAAAGCCGATGAA +
Preference number: 5 (lower is better)
Translates to: LACLVGKPFLFDCLC*RHLLLSFYPFKADE
Trigger: TTCATCGGCTTTGAAGGGGTAAAAGGAAAGAAGAAGATGTCGGCAGCAGAGGCAGTCAAAGAGAAATGGCTTCCCTACGAGGCAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp AAGAAGACACTGTTGACTGGATCAACTACACCCCCTGAAGCAAGCTaGGCTTCCAGCAGGCGCATTCCGGTTTCTCTGTCGATCAAATTC +
Preference number: 5 (lower is better)
Translates to: KKTLLTGSTTPPEAS*ASSRRIPVSLSIKF
Trigger: GAATTTGATCGACAGAGAAACCGGAATGCGCCTGCTGGAAGCCCAGCTTGCTTCAGGGGGTGTAGTTGATCCAGTCAACAGTGTCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTCGCCCGTGAGGCGTTaGGTGAACTCGTCCCAGCCG +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVSPVRR*VNSSQP
Trigger: CGGCTGGGACGAGTTCACCAAACGCCTCACGGGCGA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp CTTCCAGCAGGCGCATTCCGGTTTCTCTGTCGATCAAATTCTTCTTaGTGGCTTCTGAAACAGAGACCGTCTTGCCCGAAAACGGGTCAT +
Preference number: 5 (lower is better)
Translates to: LPAGAFRFLCRSNSS*WLLKQRPSCPKTGH
Trigger: ATGACCCGTTTTCGGGCAAGACGGTCTCTGTTTCAGAAGCCATCAAGAAGAATTTGATCGACAGAGAAACCGGAATGCGCCTGCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp TCTTCCTGTCCACTAAGACCACCCTGGTGGAGCCGTCTGATCCTGTaGTGGTTATTTCTTCCCATTCGCACTCTTGTTCACATAGCTCCT +
Preference number: 5 (lower is better)
Translates to: SSCPLRPPWWSRLIL*WLFLPIRTLVHIAP
Trigger: AGGAGCTATGTGAACAAGAGTGCGAATGGGAAGAAATAACCATCACAGGATCAGACGGCTCCACCAGGGTGGTCTTAGTGGACAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp CTCTTGAGCTCGTTGATTTTCACGGTGATGTGGTGTGTAGAGCCTTaGTCTGCCAGCAGGAGATTTTTAAGCGTCATCCTGGCCTCACAA +
Preference number: 5 (lower is better)
Translates to: LLSSLIFTVMWCVEP*SASRRFLSVILASQ
Trigger: TTGTGAGGCCAGGATGACGCTTAAAAATCTCCTGCTGGCAGAGCAAGGCTCTACACACCACATCACCGTGAAAATCAACGAGCTCAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp TCATTAATCAGCCCCTGCAGCTCGAGGGTTCGATTGTTGCTGATCTaGAGTTGGCTCCTTAGCTCGGAGATGGTTGAGTTTTTATCGCTG +
Preference number: 5 (lower is better)
Translates to: SLISPCSSRVRLLLI*SWLLSSEMVEFLSL
Trigger: CAGCGATAAAAACTCAACCATCTCCGAGCTAAGGAGCCAACTGCAGATCAGCAACAATCGAACCCTCGAGCTGCAGGGGCTGATTAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 90 bp GTTCCTGAACCTTCAGTTTGCTCATGGCCTCCGTGGCGCTGTTGTTaGCTTTCTGCAGGTCATACTGGACTCTCTGCAACTTGGAATTTT +
Preference number: 5 (lower is better)
Translates to: VPEPSVCSWPPWRCC*LSAGHTGLSATWNF
Trigger: AAAATTCCAAGTTGCAGAGAGTCCAGTATGACCTGCAGAAAGCCAACAACAGCGCCACGGAGGCCATGAGCAAACTGAAGGTTCAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTGGCCGCAATGGGGCTaGACTCCTCCAGAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNWPQWG*TPPEGL
Trigger: CAGACCCTCTGGAGGAGTCAAGCCCCATTGCGGCCA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp TTACTCAGTTCATTTTCGTATTCCCAGCGCCGCTTGGCCTCCTCCTaGTACTCAGCTTTGAGCCTTTCGATCTCTTTGTTCTTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LLSSFSYSQRRLASS*YSALSLSISLFLSW
Trigger: CCAGGACAAGAACAAAGAGATCGAAAGGCTCAAAGCTGAGTATCAGGAGGAGGCCAAGCGGCGCTGGGAATACGAAAATGAACTGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 90 bp CTTTCCGACTCTATCTTCCTAATGGTCTCCTCCTTGCGGGAATACTaGGTTTTCCACTGGTTCAGGTCGTTCTGGATCTGCTGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LSDSIFLMVSSLREY*VFHWFRSFWICCFS
Trigger: TGAGAAGCAGCAGATCCAGAACGACCTGAACCAGTGGAAAACTCAGTATTCCCGCAAGGAGGAGACCATTAGGAAGATAGAGTCGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp GCGCATTCCGGTTTCTCTGTCGATCAAATTCTTCTTGATGGCTTCTaGAACAGAGACCGTCTTGCCCGAAAACGGGTCATCGAAACCAGT +
Preference number: 5 (lower is better)
Translates to: AHSGFSVDQILLDGF*NRDRLARKRVIETS
Trigger: ACTGGTTTCGATGACCCGTTTTCGGGCAAGACGGTCTCTGTTTCAGAAGCCATCAAGAAGAATTTGATCGACAGAGAAACCGGAATGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp TTTCAAGGAGATCATGTCAGCAAACTGTGTGAGGCTAAGGCTGCCTaGTCGGTATTGATCGAAGAACTTCCTGTCAACGAGGCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: FQGDHVSKLCEAKAA*SVLIEELPVNEALV
Trigger: GACAAGGGCCTCGTTGACAGGAAGTTCTTCGATCAATACCGATCAGGCAGCCTTAGCCTCACACAGTTTGCTGACATGATCTCCTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp GCACCTTTCTCTCAGCTGCATGTAGCTGACCTTCTTCTTGGTGATTaGATCCACGAAGTTCTTCTGACTATCTCGGGGATCGTTCAAGGA +
Preference number: 5 (lower is better)
Translates to: APFSQLHVADLLLGD*IHEVLLTISGIVQG
Trigger: TCCTTGAACGATCCCCGAGATAGTCAGAAGAACTTCGTGGATCCAATCACCAAGAAGAAGGTCAGCTACATGCAGCTGAGAGAAAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAATGCGACCCAGCGTGTaGATCCGCGGGTGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKMRPSV*IRGWEP
Trigger: CGGCTCCCACCCGCGGATCAACACGCTGGGTCGCAT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTACCCTCCGGCTCCCTaGGAGCTGGCTCTTCGGACC +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSYPPAP*ELALRT
Trigger: GGTCCGAAGAGCCAGCTCCAAGGGAGCCGGAGGGTA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCCCGTCACGTACCACTaGCTGCGCTCGTTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVPVTYH*LRSLLS
Trigger: GGACAACAACGAGCGCAGCAAGTGGTACGTGACGGG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCAACCTCGGCCAGGGCTaGGGAGTCGTTCTGTACGCT +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVNLGQG*GVVLYA
Trigger: AGCGTACAGAACGACTCCCAAGCCCTGGCCGAGGTT...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGGTGACGGTCACGGGTaGTCTGATTCCCTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLGDGHG*SDSLEG
Trigger: TCCTTCCAGGGAATCAGACAACCCGTGACCGTCACC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp ATCATGTCAGCAAACTGTGTGAGGCTAAGGCTGCCTGATCGGTATTaGTCGAAGAACTTCCTGTCAACGAGGCCCTTGTCAATAGCATCT +
Preference number: 5 (lower is better)
Translates to: IMSANCVRLRLPDRY*SKNFLSTRPLSIAS
Trigger: AGATGCTATTGACAAGGGCCTCGTTGACAGGAAGTTCTTCGATCAATACCGATCAGGCAGCCTTAGCCTCACACAGTTTGCTGACATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp TTCTCCAGGTCCCACAATCTGAAGTCTATCTGTTTATCTATCTTTTaGCAGCGGTCCGTCAGCTGGGTCACTTTCTCAGTGAATTTGCCC +
Preference number: 5 (lower is better)
Translates to: FSRSHNLKSICLSIF*QRSVSWVTFSVNLP
Trigger: GGGCAAATTCACTGAGAAAGTGACCCAGCTGACGGACCGCTGGCAAAAGATAGATAAACAGATAGACTTCAGATTGTGGGACCTGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp TGGAATCTCCAAACTTCATGGACTCTAAAGAGTCCTGGCGGCGTTTaGCATCATATAGCCACTTGCAGAAGCTCTGATAGTTGTCCCGAT +
Preference number: 5 (lower is better)
Translates to: WNLQTSWTLKSPGGV*HHIATCRSSDSCPD
Trigger: ATCGGGACAACTATCAGAGCTTCTGCAAGTGGCTATATGATGCCAAACGCCGCCAGGACTCTTTAGAGTCCATGAAGTTTGGAGATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp CGCTGTTGTTGGCTTTCTGCAGGTCATACTGGACTCTCTGCAACTTaGAATTTTCGTCCTCCAGGCACTTCCTCTCATTGGTTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: RCCWLSAGHTGLSAT*NFRPPGTSSHWFLC
Trigger: ACAAAGAAACCAATGAGAGGAAGTGCCTGGAGGACGAAAATTCCAAGTTGCAGAGAGTCCAGTATGACCTGCAGAAAGCCAACAACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTACCCTCCGGCTCCCTaGGAGCTGGCTCTTCGGACC +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNYPPAP*ELALRT
Trigger: GGTCCGAAGAGCCAGCTCCAAGGGAGCCGGAGGGTA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCCAGGCTCACAAGCTaGGCCTTGAACTGGGAACAC +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSRLTS*ALNWEH
Trigger: GTGTTCCCAGTTCAAGGCCAAGCTTGTGAGCCTGGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTCCAGCATCTTCCTCTaGGAGGACTCGTCGGAGGCT +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSSIFL*EDSSEA
Trigger: AGCCTCCGACGAGTCCTCCAAGAGGAAGATGCTGGA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAGCTGCTGGGTCAGGTaGGTGATTTTGACGGCTTGC +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSCWVR*VILTAC
Trigger: GCAAGCCGTCAAAATCACCAACCTGACCCAGCAGCT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTCCCGGGCTACGGCATaGTCCACAGTGAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVSRATA*STVSFS
Trigger: TGAGAAGCTCACTGTGGACAATGCCGTAGCCCGGGA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp CATTATATATGCCTGCTATGCAGCTTGAACCCTGGAGGAAGTCCTTaGTTCTCTCCCCAACCTCATCATAGGAAATCTGACCGGATTCCA +
Preference number: 5 (lower is better)
Translates to: HYICLLCSLNPGGSP*FSPQPHHRKSDRIP
Trigger: TGGAATCCGGTCAGATTTCCTATGATGAGGTTGGGGAGAGAATCAAGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGCATATATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp CAGCTTCTGCTTAGTGGTCTCATTATATATGCCTGCTATGCAGCTTaGACCCTGGAGGAAGTCCTTGATTCTCTCCCCAACCTCATCATA +
Preference number: 5 (lower is better)
Translates to: QLLLSGLIIYACYAA*TLEEVLDSLPNLII
Trigger: TATGATGAGGTTGGGGAGAGAATCAAGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGCATATATAATGAGACCACTAAGCAGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp CAGCAGGCTCTCTCTCTCCTGAACAACTTGAGTGCACTGACTCTTTaGCTCCTGGATCCTATTAGATGCCTTTGCCAGCTCATTTTCATA +
Preference number: 5 (lower is better)
Translates to: QQALSLLNNLSALTL*LLDPIRCLCQLIFI
Trigger: TATGAAAATGAGCTGGCAAAGGCATCTAATAGGATCCAGGAGTCAAAGAGTCAGTGCACTCAAGTTGTTCAGGAGAGAGAGAGCCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127906.8
CDS GCA 90 bp TTGTATTCAATGATCTTCTCCCGTTCTTTCTCCAGCTCTTTGATCTaGTCCAGCAGGTGCTGGAGAGGCATATTCTTGTCACAGGGGTAT +
Preference number: 5 (lower is better)
Translates to: LYSMIFSRSFSSSLI*SSRCWRGIFLSQGY
Trigger: ATACCCCTGTGACAAGAATATGCCTCTCCAGCACCTGCTGGAGCAGATCAAAGAGCTGGAGAAAGAACGGGAGAAGATCATTGAATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp CTGCCTGGTATTTCTGCAGGTTCTGATCTAGGAACTTATTCTTATTaGAATTTTCCGAGTTGGCATCCCGGGCCAGTCTTAGCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: LPGISAGSDLGTYSY*NFPSWHPGPVLAPL
Trigger: AAGAGGAGCTAAGACTGGCCCGGGATGCCAACTCGGAAAATTGCAATAAGAATAAGTTCCTAGATCAGAACCTGCAGAAATACCAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 90 bp TGTCTCAAATTTTCCCTCTCTCTCTGTAAATCATTAATCAGCCCCTaGAGCTCGAGGGTTCGATTGTTGCTGATCTGCAGTTGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: CLKFSLSLCKSLISP*SSRVRLLLICSWLL
Trigger: AAGGAGCCAACTGCAGATCAGCAACAATCGAACCCTCGAGCTGCAGGGGCTGATTAATGATTTACAGAGAGAGAGGGAAAATTTGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 90 bp ATCTCATCCTTAAGATCTCGGTTCTCCCGGGAGAGTCTGTCCATCTaGTTTCTGAGATTCTTGGAATCGTCTTCCTTCTGCATGGATATC +
Preference number: 5 (lower is better)
Translates to: ISSLRSRFSRESLSI*FLRFLESSSFCMDI
Trigger: GATATCCATGCAGAAGGAAGACGATTCCAAGAATCTCAGAAACCAGATGGACAGACTCTCCCGGGAGAACCGAGATCTTAAGGATGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGTAAAGGGCTCGCATTaGTTCCTGGAGCTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLVKGSH*FLELKQ
Trigger: CTGCTTCAGCTCCAGGAACAAATGCGAGCCCTTTAC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTCACGCAGGTCTGCTTaGATCTTGTCCAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVSRRSA*ILSSCQ
Trigger: CTGGCAGCTGGACAAGATCAAAGCAGACCTGCGTGA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATGCTTGTGCCTGGCGTaGTCCTCTGAGCGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKCLCLA*SSERCW
Trigger: CCAGCAGCGCTCAGAGGACAACGCCAGGCACAAGCA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGTGGTCTTGGTGATGTaGATCTCGGTCTCGAACTGG +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLVVLVM*ISVSNW
Trigger: CCAGTTCGAGACCGAGATCAACATCACCAAGACCAC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGTGTTCTTCAGCCTCTaGACCTCCTCACACAAGCTC +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLVFFSL*TSSHKL
Trigger: GAGCTTGTGTGAGGAGGTCAAGAGGCTGAAGAACAC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGCCTCCAGCGTTGCTTaGGCACGGTTCAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSASSVA*ARFSSS
Trigger: GGATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTGCCTGCTATGCAGCTaGAACCCTGGAGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNCLLCS*NPGGSP
Trigger: AGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGCA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTGGCCGCAATGGGGCTaGACTCCTCCAGAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQWPQWG*TPPEGL
Trigger: CAGACCCTCTGGAGGAGTCAAGCCCCATTGCGGCCA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCCTGGTGGCCATGTCTaGGTCAATGAGACCCTGGTT +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNPGGHV*VNETLV
Trigger: AACCAGGGTCTCATTGACCAAGACATGGCCACCAGG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCGGAAGCCATTTCTCTTaGACTGCCTCTGCTGCCGAC +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVGSHFS*TASAAD
Trigger: GTCGGCAGCAGAGGCAGTCAAAGAGAAATGGCTTCC...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp TTCAGCTGCACGATCTTCTTGGACTTGTTTACCAAGTTCTGCACCTaGCGCTTGTATTCAATGATCTTCTCCCGTTCTTTCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: FSCTIFLDLFTKFCT*RLYSMIFSRSFSSS
Trigger: AGAGCTGGAGAAAGAACGGGAGAAGATCATTGAATACAAGCGTCAGGTGCAGAACTTGGTAAACAAGTCCAAGAAGATCGTGCAGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCCTCCAACTGGTAGATaGCTGACTTCTCACGCAGGT +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVPPTGR*LTSHAG
Trigger: ACCTGCGTGAGAAGTCAGCAATCTACCAGTTGGAGG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCCTCCTCGCAGTCATaGATCCACATGATCTCTCGA +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSSSQS*IHMISR
Trigger: TCGAGAGATCATGTGGATCAATGACTGCGAGGAGGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCACTTGCTGCGCTCGTaGTTGTCCTTCAGAATACAC +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLHLLRS*LSFRIH
Trigger: GTGTATTCTGAAGGACAACAACGAGCGCAGCAAGTG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACCCGTCACGTACCACTaGCTGCGCTCGTTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKPVTYH*LRSLLS
Trigger: GGACAACAACGAGCGCAGCAAGTGGTACGTGACGGG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGATTGTGGTTGACATCTaGGCAGGTACCCAGGTGAGT +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLIVVDI*AGTQVS
Trigger: ACTCACCTGGGTACCTGCCAAGATGTCAACCACAAT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAAACCTCGGCCAGGGCTaGGGAGTCGTTCTGTACGCT +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKNLGQG*GVVLYA
Trigger: AGCGTACAGAACGACTCCCAAGCCCTGGCCGAGGTT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCAATTTTCCGAGTaGGCATCCCGGGCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVLQFSE*ASRASL
Trigger: AAGACTGGCCCGGGATGCCAACTCGGAAAATTGCAA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATCCTCCAGGGACTGCTaGTGCCTGGCGTTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSSRDC*CLALSS
Trigger: AGAGGACAACGCCAGGCACAAGCAGTCCCTGGAGGA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACAGCATCAAGTGTTCCTaGGTCAGGTTCTCCGTGAGC +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSIKCS*VRFSVS
Trigger: GCTCACGGAGAACCTGACCAAGGAACACTTGATGCT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCAGCTCGAGGGTTCGATaGTTGCTGATCTGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVSSRVR*LLICSW
Trigger: CCAACTGCAGATCAGCAACAATCGAACCCTCGAGCT...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTCTTGCTCCAGGACTTaGATCTTCACCAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVSCSRT*IFTSRL
Trigger: GAGCCTGCTGGTGAAGATCAAAGTCCTGGAGCAAGA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCAGCCTCGCCTTGTCTaGCTCCAGGACTTTGATCTT +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVQPRLV*LQDFDL
Trigger: AAGATCAAAGTCCTGGAGCAAGACAAGGCGAGGCTG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACGCTGCAGCCTCGCCTaGTCTTGCTCCAGGACTTTG +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKRCSLA*SCSRTL
Trigger: CAAAGTCCTGGAGCAAGACAAGGCGAGGCTGCAGCG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCGCTGCAGCCTCGCCTaGTCTTGCTCCAGGACTTTG +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQRCSLA*SCSRTL
Trigger: CAAAGTCCTGGAGCAAGACAAGGCGAGGCTGCAGCG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGGCCTCCAGCGTTGCTTaGGCACGGTTCAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQASSVA*ARFSSS
Trigger: GGATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGC...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp TTGGCCTTGAACTGGGAACACTCTGCCTGGTATTTCTGCAGGTTCTaGTCTAGGAACTTATTCTTATTGCAATTTTCCGAGTTGGCATCC +
Preference number: 5 (lower is better)
Translates to: LALNWEHSAWYFCRF*SRNLFLLQFSELAS
Trigger: GGATGCCAACTCGGAAAATTGCAATAAGAATAAGTTCCTAGATCAGAACCTGCAGAAATACCAGGCAGAGTGTTCCCAGTTCAAGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 90 bp GCAGGTTCTGATCTAGGAACTTATTCTTATTGCAATTTTCCGAGTTaGCATCCCGGGCCAGTCTTAGCTCCTCTTCCAAAACTTCAATCT +
Preference number: 5 (lower is better)
Translates to: AGSDLGTYSYCNFPS*HPGPVLAPLPKLQS
Trigger: AGATTGAAGTTTTGGAAGAGGAGCTAAGACTGGCCCGGGATGCCAACTCGGAAAATTGCAATAAGAATAAGTTCCTAGATCAGAACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTTGCTGCGCTCGTTGTaGTCCTTCAGAATACACTCA +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLLLRSL*SFRIHS
Trigger: TGAGTGTATTCTGAAGGACAACAACGAGCGCAGCAA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCAGCATGTCTTCCGTTaGCAGAATAGCCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVQHVFR*QNSLEK
Trigger: CTTCTCCAGGCTATTCTGCAAACGGAAGACATGCTG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCTGTTTATCTATCTTTaGCCAGCGGTCCGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNLFIYL*PAVRQL
Trigger: CAGCTGACGGACCGCTGGCAAAAGATAGATAAACAG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCCTGTTTATCTATCTTTaGCCAGCGGTCCGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVLFIYL*PAVRQL
Trigger: CAGCTGACGGACCGCTGGCAAAAGATAGATAAACAG...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGAGTCCTGGCGGCGTTaGGCATCATATAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSESWRR*ASYSHL
Trigger: CAAGTGGCTATATGATGCCAAACGCCGCCAGGACTC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCTCACAAGCTTGGCCTaGAACTGGGAACACTCTGCC +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSLTSLA*NWEHSA
Trigger: GGCAGAGTGTTCCCAGTTCAAGGCCAAGCTTGTGAG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTGCAAGATGCTGTCATaGAGCCTGACTATCTCATCC +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLCKMLS*SLTISS
Trigger: GGATGAGATAGTCAGGCTCAATGACAGCATCTTGCA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCCATCAAATACCAGCTaGGAGGAATCAACGGTCCAC +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNPSNTS*EESTVH
Trigger: GTGGACCGTTGATTCCTCCAAGCTGGTATTTGATGG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACACTCATAGAGCTGCATaGCCGTCACCTTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNTHRAA*PSPSSS
Trigger: TGAGGAAGAAGGTGACGGCAATGCAGCTCTATGAGT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATCCCGGGCTACGGCATaGTCCACAGTGAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSRATA*STVSFS
Trigger: TGAGAAGCTCACTGTGGACAATGCCGTAGCCCGGGA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGGGTGACGGTCACGGGTaGTCTGATTCCCTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQGDGHG*SDSLEG
Trigger: TCCTTCCAGGGAATCAGACAACCCGTGACCGTCACC...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCCCTGGAGGAAGTCCTaGATTCTCTCCCCAACCTCA +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSPWRKS*ILSPTS
Trigger: TGAGGTTGGGGAGAGAATCAAGGACTTCCTCCAGGG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCTTTGGTATCATCACTaGGGTCTGAGAGGATTTCGC +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLLWYHH*GLRGFR
Trigger: GCGAAATCCTCTCAGACCCAAGTGATGATACCAAAG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGGCATCTCTCCTTCAGTaGCAGATAGGTGAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLASLLQ*QIGEVF
Trigger: GAAAACCTCACCTATCTGCAACTGAAGGAGAGATGC...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGGAAGCCATTTCTCTTaGACTGCCTCTGCTGCCGAC +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSGSHFS*TASAAD
Trigger: GTCGGCAGCAGAGGCAGTCAAAGAGAAATGGCTTCC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTCACGCAGGTCTGCTTaGATCTTGTCCAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSRRSA*ILSSCQ
Trigger: CTGGCAGCTGGACAAGATCAAAGCAGACCTGCGTGA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCCTCCAACTGGTAGATaGCTGACTTCTCACGCAGGT +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSPPTGR*LTSHAG
Trigger: ACCTGCGTGAGAAGTCAGCAATCTACCAGTTGGAGG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTTCCTTGACCTCCAGTaGACTCATGCGTATAGAGAA +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLFLDLQ*THAYRE
Trigger: TTCTCTATACGCATGAGTCAACTGGAGGTCAAGGAA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTGGAGAGGCATATTCTaGTCACAGGGGTATTTCTTC +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLWRGIF*SQGYFF
Trigger: GAAGAAATACCCCTGTGACAAGAATATGCCTCTCCA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAGCTGCACGATCTTCTaGGACTTGTTTACCAAGTTC +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSCTIF*DLFTKF
Trigger: GAACTTGGTAAACAAGTCCAAGAAGATCGTGCAGCT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGATCACTTTATTGTGGTaGACATCTTGGCAGGTACCC +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLITLLW*TSWQVP
Trigger: GGGTACCTGCCAAGATGTCAACCACAATAAAGTGAT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAGAGTCCTGGCGGCGTTaGGCATCATATAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKESWRR*ASYSHL
Trigger: CAAGTGGCTATATGATGCCAAACGCCGCCAGGACTC...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCTCACAAGCTTGGCCTaGAACTGGGAACACTCTGCC +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNLTSLA*NWEHSA
Trigger: GGCAGAGTGTTCCCAGTTCAAGGCCAAGCTTGTGAG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCCAGGCTCACAAGCTaGGCCTTGAACTGGGAACAC +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSRLTS*ALNWEH
Trigger: GTGTTCCCAGTTCAAGGCCAAGCTTGTGAGCCTGGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGAGCTCAGCTTGTCTCTaGAGCTCCTCCAGGCTCACA +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSSACL*SSSRLT
Trigger: TGTGAGCCTGGAGGAGCTCAAGAGACAAGCTGAGCT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAAGCTCAGCTTGTCTCTaGAGCTCCTCCAGGCTCACA +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSSACL*SSSRLT
Trigger: TGTGAGCCTGGAGGAGCTCAAGAGACAAGCTGAGCT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGTCATTCTTCTGTaGGTCGAACCTGTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNIVILL*VEPVLH
Trigger: GTGGAGGACAGGTTCGACCAACAGAAGAATGACTAT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTGGTGGATCGTGGTCTaGGTGATGTTGATCTCGGTC +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSWWIVV*VMLISV
Trigger: GACCGAGATCAACATCACCAAGACCACGATCCACCA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTTATCCTGGATGGTCTaGGCAGCGTCATCGAGGGAC +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQLSWMV*AASSRD
Trigger: GTCCCTCGATGACGCTGCCAAGACCATCCAGGATAA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATCCGTGGCGCTGTTGTaGGCTTTCTGCAGGTCATAC +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSVALL*AFCRSY
Trigger: GTATGACCTGCAGAAAGCCAACAACAGCGCCACGGA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTCGAGGGTTCGATTGTaGCTGATCTGCAGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSSRVRL*LICSWL
Trigger: GAGCCAACTGCAGATCAGCAACAATCGAACCCTCGA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCCCTGGAGGAAGTCCTaGATTCTCTCCCCAACCTCA +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNPWRKS*ILSPTS
Trigger: TGAGGTTGGGGAGAGAATCAAGGACTTCCTCCAGGG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATGCCTGCTATGCAGCTaGAACCCTGGAGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKCLLCS*NPGGSP
Trigger: AGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGCA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGAAAGCCAGTAGCTGCTaGGGCTTCCAGCAACTCCAG +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQKASSC*GFQQLQ
Trigger: CTGGAGTTGCTGGAAGCCCAAGCAGCTACTGGCTTT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAAAAGCCAGTAGCTGCTaGGGCTTCCAGCAACTCCAG +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKKASSC*GFQQLQ
Trigger: CTGGAGTTGCTGGAAGCCCAAGCAGCTACTGGCTTT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCTTTGGTATCATCACTaGGGTCTGAGAGGATTTCGC +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNLWYHH*GLRGFR
Trigger: GCGAAATCCTCTCAGACCCAAGTGATGATACCAAAG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCCTGGTGGCCATGTCTaGGTCAATGAGACCCTGGTT +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNPGGHV*VNETLV
Trigger: AACCAGGGTCTCATTGACCAAGACATGGCCACCAGG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCCATCGATGAAACCTTaGCGGATGGCTTCTTCGGTG +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSPSMKP*RMASSV
Trigger: CACCGAAGAAGCCATCCGCAAAGGTTTCATCGATGG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 90 bp CAGATATTTCACTGTGCAGGTTCTTCTGCTCATTCAAAAACCGCATaGCTGTGTTGGAATCTCCAAACTTCATGGACTCTAAAGAGTCCT +
Preference number: 5 (lower is better)
Translates to: QIFHCAGSSAHSKTA*LCWNLQTSWTLKSP
Trigger: AGGACTCTTTAGAGTCCATGAAGTTTGGAGATTCCAACACAGTCATGCGGTTTTTGAATGAGCAGAAGAACCTGCACAGTGAAATATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGTAAAGGGCTCGCATTaGTTCCTGGAGCTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNVKGSH*FLELKQ
Trigger: CTGCTTCAGCTCCAGGAACAAATGCGAGCCCTTTAC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTCTTTCTCCAGCTCTTaGATCTGCTCCAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSFSSS*ICSSRC
Trigger: GCACCTGCTGGAGCAGATCAAAGAGCTGGAGAAAGA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATCTTTCTCCAGCTCTTaGATCTGCTCCAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSFSSS*ICSSRC
Trigger: GCACCTGCTGGAGCAGATCAAAGAGCTGGAGAAAGA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGATACACTCATCCCCTTaGTGTACGATTTTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLIHSSP*CTIFWS
Trigger: AGACCAGAAAATCGTACACAAAGGGGATGAGTGTAT...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCGTTCTTGATGAAGTCTaGGTAATGGAGCTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVVLDEV*VMELKV
Trigger: GACCTTGAGCTCCATTACCAAGACTTCATCAAGAAC...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACAACCGCATGACTGTGTaGGAATCTCCAAACTTCATG +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNNRMTV*ESPNFM
Trigger: CATGAAGTTTGGAGATTCCAACACAGTCATGCGGTT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCTGATTTGTCTCGTTaGCCAGATATTTCACTGTGC +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSDLSR*PDISLC
Trigger: GCACAGTGAAATATCTGGCAAACGAGACAAATCAGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTTGCAATTTTCCGAGTaGGCATCCCGGGCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNLQFSE*ASRASL
Trigger: AAGACTGGCCCGGGATGCCAACTCGGAAAATTGCAA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTGGTTTCTGAGATTCTaGGAATCGTCTTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVWFLRF*ESSSFC
Trigger: GCAGAAGGAAGACGATTCCAAGAATCTCAGAAACCA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCTTGCTCCAGGACTTaGATCTTCACCAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSCSRT*IFTSRL
Trigger: GAGCCTGCTGGTGAAGATCAAAGTCCTGGAGCAAGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACAGCCTCGCCTTGTCTaGCTCCAGGACTTTGATCTT +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKQPRLV*LQDFDL
Trigger: AAGATCAAAGTCCTGGAGCAAGACAAGGCGAGGCTG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGCTTGTCAATAGCATCTaGAATGTCATACTGACTGCC +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLLVNSI*NVILTA
Trigger: GGCAGTCAGTATGACATTCAAGATGCTATTGACAAG...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACCATCGATGAAACCTTaGCGGATGGCTTCTTCGGTG +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKPSMKP*RMASSV
Trigger: CACCGAAGAAGCCATCCGCAAAGGTTTCATCGATGG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATCCTCCTCGCAGTCATaGATCCACATGATCTCTCGA +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSSSQS*IHMISR
Trigger: TCGAGAGATCATGTGGATCAATGACTGCGAGGAGGA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTGGACATCAATGCACTaGGTGATCTGCAGAATCCAG +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSWTSMH*VICRIQ
Trigger: CTGGATTCTGCAGATCACCAAGTGCATTGATGTCCA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATACACTCATCCCCTTaGTGTACGATTTTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNIHSSP*CTIFWS
Trigger: AGACCAGAAAATCGTACACAAAGGGGATGAGTGTAT...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCACTTGCTGCGCTCGTaGTTGTCCTTCAGAATACAC +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNHLLRS*LSFRIH
Trigger: GTGTATTCTGAAGGACAACAACGAGCGCAGCAAGTG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCAGCATGTCTTCCGTTaGCAGAATAGCCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQQHVFR*QNSLEK
Trigger: CTTCTCCAGGCTATTCTGCAAACGGAAGACATGCTG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTAGCCTTTCGATCTCTTaGTTCTTGTCCTGGATGGTC +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSSLSIS*FLSWMV
Trigger: GACCATCCAGGACAAGAACAAAGAGATCGAAAGGCT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGAGGCACTTCCTCTCATaGGTTTCTTTGTCGACCAGC +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQRHFLS*VSLSTS
Trigger: GCTGGTCGACAAAGAAACCAATGAGAGGAAGTGCCT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCCATCAAATACCAGCTaGGAGGAATCAACGGTCCAC +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQPSNTS*EESTVH
Trigger: GTGGACCGTTGATTCCTCCAAGCTGGTATTTGATGG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATACTCATAGAGCTGCATaGCCGTCACCTTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNTHRAA*PSPSSS
Trigger: TGAGGAAGAAGGTGACGGCAATGCAGCTCTATGAGT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGTCGATCAAATTCTTCTaGATGGCTTCTGAAACAGAG +
Preference number: 5 (lower is better)
Translates to: ATELNEPLLLGFYCSYVLSIKFF*MASETE
Trigger: CTCTGTTTCAGAAGCCATCAAGAAGAATTTGATCGA...CAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCATTTTGCAGCATTTCTaGGATGGTGTTCTGATTCTG +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVILQHF*DGVLIL
Trigger: CAGAATCAGAACACCATCCAAGAAATGCTGCAAAAT...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTGGACATCAATGCACTaGGTGATCTGCAGAATCCAG +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNWTSMH*VICRIQ
Trigger: CTGGATTCTGCAGATCACCAAGTGCATTGATGTCCA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTACGATCTTCTTGGACTaGTTTACCAAGTTCTGCACC +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSTIFLD*FTKFCT
Trigger: GGTGCAGAACTTGGTAAACAAGTCCAAGAAGATCGT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTTGCTGCGCTCGTTGTaGTCCTTCAGAATACACTCA +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQLLRSL*SFRIHS
Trigger: TGAGTGTATTCTGAAGGACAACAACGAGCGCAGCAA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTGCACTTCTTCTGATTaGTCTCGTTTGCCAGATATT +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNCTSSD*SRLPDI
Trigger: AATATCTGGCAAACGAGACAAATCAGAAGAAGTGCA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTTGTCTAGGTTTTGCTaGGCTGACTTTCCATCGAGC +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQLSRFC*ADFPSS
Trigger: GCTCGATGGAAAGTCAGCCAAGCAAAACCTAGACAA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAATTGTCTAGGTTTTGCTaGGCTGACTTTCCATCGAGC +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKLSRFC*ADFPSS
Trigger: GCTCGATGGAAAGTCAGCCAAGCAAAACCTAGACAA...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGATAGTCATTCTTCTGTaGGTCGAACCTGTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQIVILL*VEPVLH
Trigger: GTGGAGGACAGGTTCGACCAACAGAAGAATGACTAT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAGCCTTTCGATCTCCTaGTTCTTATCCTGGATGGTC +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSLSIS*FLSWMV
Trigger: GACCATCCAGGATAAGAACAAGGAGATCGAAAGGCT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGCTCTCATTGGTTTCTTaGTCGACCAGCTGTTTGAGC +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQLSLVS*STSCLS
Trigger: GCTCAAACAGCTGGTCGACAAAGAAACCAATGAGAG...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGGTGATTTTGACGGCTaGCTCTTTCAAAGACCTCCT +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNGDFDG*LFQRPP
Trigger: AGGAGGTCTTTGAAAGAGCAAGCCGTCAAAATCACC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGTCAGGTTGGTGATTTaGACGGCTTGCTCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSVRLVI*TACSFK
Trigger: TTTGAAAGAGCAAGCCGTCAAAATCACCAACCTGAC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACTCGATCAAATTCTTCTaGATGGCTTCTGAAACAGAG +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNSIKFF*MASETE
Trigger: CTCTGTTTCAGAAGCCATCAAGAAGAATTTGATCGA...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTGGATCGAAAAAGCCTTaGGTATCATCACTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSGSKKP*VSSLGS
Trigger: AGACCCAAGTGATGATACCAAAGGCTTTTTCGATCC...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGCATCTCTCCTTCAGTaGCAGATAGGTGAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNASLLQ*QIGEVF
Trigger: GAAAACCTCACCTATCTGCAACTGAAGGAGAGATGC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTACAGACATCTCCTTATaGGTTTCCGGGTCAACTATG +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSTDISL*VSGSTM
Trigger: CATAGTTGACCCGGAAACCAATAAGGAGATGTCTGT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTTCCTTGACCTCCAGTaGACTCATGCGTATAGAGAA +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNFLDLQ*THAYRE
Trigger: TTCTCTATACGCATGAGTCAACTGGAGGTCAAGGAA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCAGGTAGGCTTCAGTaGACTGAGCCTCTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSGRLQ*TEPLQK
Trigger: TTTTTGAAGAGGCTCAGTCAACTGAAGCCTACCTGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTGGAGAGGCATATTCTaGTCACAGGGGTATTTCTTC +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNWRGIF*SQGYFF
Trigger: GAAGAAATACCCCTGTGACAAGAATATGCCTCTCCA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATACGATCTTCTTGGACTaGTTTACCAAGTTCTGCACC +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNTIFLD*FTKFCT
Trigger: GGTGCAGAACTTGGTAAACAAGTCCAAGAAGATCGT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAAGCTGCACGATCTTCTaGGACTTGTTTACCAAGTTC +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKSCTIF*DLFTKF
Trigger: GAACTTGGTAAACAAGTCCAAGAAGATCGTGCAGCT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp ACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACCTTCATGTAATCTTCTaGTCTCATCGTTTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: TELNEPLLLGFYCSYVLNLHVIF*SHRFQL
Trigger: AAGCTGAAAACGATGAGACAAGAAGATTACATGAAG...GTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAGTTCTTGATGAAGTCTaGGTAATGGAGCTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKVLDEV*VMELKV
Trigger: GACCTTGAGCTCCATTACCAAGACTTCATCAAGAAC...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATATCACTTTATTGTGGTaGACATCTTGGCAGGTACCC +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNITLLW*TSWQVP
Trigger: GGGTACCTGCCAAGATGTCAACCACAATAAAGTGAT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAACCGCATGACTGTGTaGGAATCTCCAAACTTCATG +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNNRMTV*ESPNFM
Trigger: CATGAAGTTTGGAGATTCCAACACAGTCATGCGGTT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTATGAATTTCTTTCTCTaGGCCTCCACCAAAGAGTAC +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSMNFFL*ASTKEY
Trigger: GTACTCTTTGGTGGAGGCCAAGAGAAAGAAATTCAT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AAAGCTACAGAGCTAAATGAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTTTCGATGAGCTCCTaGTTCATTGCTTGGAATAAA +
Preference number: 5 (lower is better)
Translates to: KATELNEPLLLGFYCSYVFSMSS*FIAWNK
Trigger: TTTATTCCAAGCAATGAACAAGGAGCTCATCGAAAA...GACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAGGATCGAAAAAGCCTTaGGTATCATCACTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKGSKKP*VSSLGS
Trigger: AGACCCAAGTGATGATACCAAAGGCTTTTTCGATCC...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAACAGACATCTCCTTATaGGTTTCCGGGTCAACTATG +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKTDISL*VSGSTM
Trigger: CATAGTTGACCCGGAAACCAATAAGGAGATGTCTGT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTATTTTGCAGCATTTCTaGGATGGTGTTCTGATTCTG +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSILQHF*DGVLIL
Trigger: CAGAATCAGAACACCATCCAAGAAATGCTGCAAAAT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATCATCTGATCGTTGGCTaGTGTAAAATACTCATCCAG +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNHLIVG*CKILIQ
Trigger: CTGGATGAGTATTTTACACAAGCCAACGATCAGATG...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATGTTTCGATCACTTTATaGTGGTTGACATCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNVSITL*WLTSWQ
Trigger: CTGCCAAGATGTCAACCACAATAAAGTGATCGAAAC...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAGTTTCGATCACTTTATaGTGGTTGACATCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKVSITL*WLTSWQ
Trigger: CTGCCAAGATGTCAACCACAATAAAGTGATCGAAAC...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTCCGATAATTCCTCAGTaGTTTGATTTGTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSPIIPQ*FDLFLQ
Trigger: CTGGAGAAACAAATCAAACAACTGAGGAATTATCGG...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTCTGATTTGTCTCGTTaGCCAGATATTTCACTGTGC +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQSDLSR*PDISLC
Trigger: GCACAGTGAAATATCTGGCAAACGAGACAAATCAGA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTGCACTTCTTCTGATTaGTCTCGTTTGCCAGATATT +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSCTSSD*SRLPDI
Trigger: AATATCTGGCAAACGAGACAAATCAGAAGAAGTGCA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTTCTATTTTACTCTCATaGAGGCTCCTGCTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSSILLS*RLLLLS
Trigger: AGACAAAAGCAGGAGCCTCAATGAGAGTAAAATAGA...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAAATGAATTTCTTTCTCTaGGCCTCCACCAAAGAGTAC +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKMNFFL*ASTKEY
Trigger: GTACTCTTTGGTGGAGGCCAAGAGAAAGAAATTCAT...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACTTGTCAATAGCATCTaGAATGTCATACTGACTGCC +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKLVNSI*NVILTA
Trigger: GGCAGTCAGTATGACATTCAAGATGCTATTGACAAG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp GAGCCTTTACTACTGGGATTTTATTGCAGCTACGTCTTGAACATAGAAAATTCTAGGAACTTATTCTTATaGCAATTTTCCGAGTTGGCA +
Preference number: 5 (lower is better)
Translates to: EPLLLGFYCSYVLNIENSRNLFL*QFSELA
Trigger: TGCCAACTCGGAAAATTGCAATAAGAATAAGTTCCT...AGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAATCCCAGTAGTAAAGGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATTCTTGTTTAAGCTTATaGAGTTCCTTTTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNSCLSL*SSFSLT
Trigger: GGTCAAGGAAAAGGAACTCAATAAGCTTAAACAAGA...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAGCTGGTCACTTTCTaGTTTAAGCTTATTGAGTTC +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNKLVTF*FKLIEF
Trigger: GAACTCAATAAGCTTAAACAAGAAAGTGACCAGCTT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGAAGCTGGTCACTTTCTaGTTTAAGCTTATTGAGTTC +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQKLVTF*FKLIEF
Trigger: GAACTCAATAAGCTTAAACAAGAAAGTGACCAGCTT...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTAACAAAAAGCCAAGATTGCTGCTATTGTGGACATAGTCAAAGTAATACCAAACTTCATGTAATCTTCTaGTCTCATCGTTTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: LTKSQDCCYCGHSQSNTKLHVIF*SHRFQL
Trigger: AAGCTGAAAACGATGAGACAAGAAGATTACATGAAG...TTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp AGCAAACTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAGGAACTTATTCTTATaGCAATTTTCCGAGTTGGCA +
Preference number: 5 (lower is better)
Translates to: SKLHNNTFLKHTENDKPNRNLFL*QFSELA
Trigger: TGCCAACTCGGAAAATTGCAATAAGAATAAGTTCCT...ATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAGTTTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS-3UTR CAA 90 bp CTTCATAACAACACCTTTTTAAAGCACACGGAAAATGACAAGCCAAATAAACAGTTTTCGATGAGCTCCTaGTTCATTGCTTGGAATAAA +
Preference number: 5 (lower is better)
Translates to: LHNNTFLKHTENDKPNKQFSMSS*FIAWNK
Trigger: TTTATTCCAAGCAATGAACAAGGAGCTCATCGAAAA...CTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTTATGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp CAGGCCCACGGAAGGGACAAGCATGTCCACGCCTCCTaGGCCCGTCACGTACCACTTGCTGCGCTCGTTGTT +
Preference number: 6 (lower is better)
Translates to: QAHGRDKHVHAS*ARHVPLAALVV
Trigger: AACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCAGGAGGCGTGGACATGCTTGTCCCTTCCGTGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp TCCCTCTGCTGCCTCATCCAGCCCAGACACTCGCCCGTGAGGCGTTaGGTGAACTCGTCCCAGCCGGATCCACTCTGGCAAGTGTACCCT +
Preference number: 6 (lower is better)
Translates to: SLCCLIQPRHSPVRR*VNSSQPDPLWQVYP
Trigger: AGGGTACACTTGCCAGAGTGGATCCGGCTGGGACGAGTTCACCAAACGCCTCACGGGCGAGTGTCTGGGCTGGATGAGGCAGCAGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp CACTCCAGACGCTGTTTCACCCGGCTTTCTGCCTCCAGCGTTGCTTaGGCACGGTTCAGCTCATCCTCCAGCCGCTGCAGCCTCGCCTTG +
Preference number: 6 (lower is better)
Translates to: HSRRCFTRLSASSVA*ARFSSSSSRCSLAL
Trigger: CAAGGCGAGGCTGCAGCGGCTGGAGGATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGCAGAAAGCCGGGTGAAACAGCGTCTGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp TGCCGGTTTGACAGTAGCCGTCGGAGTTCTGGTCGTTaGCGGTGCAGCGCCGGGAGTGGGAGTAGAACGTCC +
Preference number: 6 (lower is better)
Translates to: CRFDSSRRSSGR*RCSAGSGSRTS
Trigger: GGACGTTCTACTCCCACTCCCGGCGCTGCACCGTCAACGACCAGAACTCCGACGGCTACTGTCAAACCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp AGGCGTTTGGTGAACTCGTCCCAGCCGGATCCACTCTaGCAAGTGTACCCTCCGGCTCCCTTGGAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: RRLVNSSQPDPL*QVYPPAPLELA
Trigger: AGCCAGCTCCAAGGGAGCCGGAGGGTACACTTGCCAGAGTGGATCCGGCTGGGACGAGTTCACCAAACGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp GCTGTTTCACCCGGCTTTCTGCCTCCAGCGTTGCTTTaGCACGGTTCAGCTCATCCTCCAGCCGCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: AVSPGFLPPALL*HGSAHPPAAAA
Trigger: GGCTGCAGCGGCTGGAGGATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGCAGAAAGCCGGGTGAAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp TGCCTCATCCAGCCCAGACACTCGCCCGTGAGGCGTTaGGTGAACTCGTCCCAGCCGGATCCACTCTGGCAA +
Preference number: 6 (lower is better)
Translates to: CLIQPRHSPVRR*VNSSQPDPLWQ
Trigger: TTGCCAGAGTGGATCCGGCTGGGACGAGTTCACCAAACGCCTCACGGGCGAGTGTCTGGGCTGGATGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp CGCTGTTTCACCCGGCTTTCTGCCTCCAGCGTTGCTTaGGCACGGTTCAGCTCATCCTCCAGCCGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RCFTRLSASSVA*ARFSSSSSRCS
Trigger: GCTGCAGCGGCTGGAGGATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGCAGAAAGCCGGGTGAAACAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp TCTCACACTCCAGACGCTGTTTCACCCGGCTTTCTGCCTCCAGCGTaGCTTTGGCACGGTTCAGCTCATCCTCCAGCCGCTGCAGCCTCG +
Preference number: 6 (lower is better)
Translates to: SHTPDAVSPGFLPPA*LWHGSAHPPAAAAS
Trigger: CGAGGCTGCAGCGGCTGGAGGATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGCAGAAAGCCGGGTGAAACAGCGTCTGGAGTGTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp AAGAAAGGTCCACAGCCAGTGGGTTCGGAGGCGGGATaGTCAGGCCCACGGAAGGGACAAGCATGTCCACGC +
Preference number: 6 (lower is better)
Translates to: KKGPQPVGSEAG*SGPRKGQACPR
Trigger: GCGTGGACATGCTTGTCCCTTCCGTGGGCCTGATCATCCCGCCTCCGAACCCACTGGCTGTGGACCTTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp TCTGGGTCTCCCGATGGGACCCGTAGGGGCGCTGCCTaGGTTTCTCGATCTCCTTCTGAAGCCTGCAGCGTT +
Preference number: 6 (lower is better)
Translates to: SGSPDGTRRGAA*VSRSPSEACSV
Trigger: AACGCTGCAGGCTTCAGAAGGAGATCGAGAAACTCAGGCAGCGCCCCTACGGGTCCCATCGGGAGACCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp TTCTGCTGCAGGGCGTTCTCCTCGGCTCTCCTTCGCTaGTCCGTGGCCTGCAAGATGCTGTCATTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: FCCRAFSSALLR*SVACKMLSLSL
Trigger: CAGGCTCAATGACAGCATCTTGCAGGCCACGGAGCAGCGAAGGAGAGCCGAGGAGAACGCCCTGCAGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp CAGACGCTGTTTCACCCGGCTTTCTGCCTCCAGCGTTaGTTTGGCACGGTTCAGCTCATCCTCCAGCCGCTG +
Preference number: 6 (lower is better)
Translates to: QTLFHPAFCLQR*FGTVQLILQPL
Trigger: CAGCGGCTGGAGGATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGCAGAAAGCCGGGTGAAACAGCGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp TTGGCAGCCTCCTCCAGGGACTGCTTGTGCCTGGCGTaGTCCTCTGAGCGCTGCTGGATGACCTGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: LAASSRDCLCLA*SSERCWMTCFS
Trigger: ACTGAAGCAGGTCATCCAGCAGCGCTCAGAGGACAACGCCAGGCACAAGCAGTCCCTGGAGGAGGCTGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 72 bp CCAGACGCTGTTTCACCCGGCTTTCTGCCTCCAGCGTaGCTTTGGCACGGTTCAGCTCATCCTCCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: PDAVSPGFLPPA*LWHGSAHPPAA
Trigger: AGCGGCTGGAGGATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGCAGAAAGCCGGGTGAAACAGCGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp GGCACGGTTCAGCTCATCCTCCAGCCGCTGCAGCCTCGCCTTGTCTaGCTCCAGGACTTTGATCTTCACCAGCAGGCTCTCTCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: GTVQLILQPLQPRLV*LQDFDLHQQALSLL
Trigger: CAGGAGAGAGAGAGCCTGCTGGTGAAGATCAAAGTCCTGGAGCAAGACAAGGCGAGGCTGCAGCGGCTGGAGGATGAGCTGAACCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp CTCCCTTGGAGCTGGCTCTTCGGACCCGAGGGACGCTaGTGGCCTTGTAAAGGGCTCGCATTTGTTCCTGGA +
Preference number: 6 (lower is better)
Translates to: LPWSWLFGPEGR*WPCKGLAFVPG
Trigger: TCCAGGAACAAATGCGAGCCCTTTACAAGGCCATCAGCGTCCCTCGGGTCCGAAGAGCCAGCTCCAAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp CGGGTACTGCTGAGAGGACTGGGAGTGGATCTGCTGTaGCTTCTGCAGCTCCGTCTTCATGGTGGCCAACAG +
Preference number: 6 (lower is better)
Translates to: RVLLRGLGVDLL*LLQLRLHGGQQ
Trigger: CTGTTGGCCACCATGAAGACGGAGCTGCAGAAGGCACAGCAGATCCACTCCCAGTCCTCTCAGCAGTACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp TTCTTCTGCATGGTTTCCGAGCCACAGGCTTTCTGCTaGAGGGCGTTCTCCTCGGCTCTCCTTCGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: FFCMVSEPQAFC*RAFSSALLRCS
Trigger: GGAGCAGCGAAGGAGAGCCGAGGAGAACGCCCTGCAGCAGAAAGCCTGTGGCTCGGAAACCATGCAGAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp TGCTTCTTCTGCATGGTTTCCGAGCCACAGGCTTTCTaGTGCAGGGCGTTCTCCTCGGCTCTCCTTCGCTGC +
Preference number: 6 (lower is better)
Translates to: CFFCMVSEPQAF*CRAFSSALLRC
Trigger: GCAGCGAAGGAGAGCCGAGGAGAACGCCCTGCAGCAGAAAGCCTGTGGCTCGGAAACCATGCAGAAGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp AGGGACTGCTTGTGCCTGGCGTTGTCCTCTGAGCGCTaGTGGATGACCTGCTTCAGTTCAATCTCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: RDCLCLALSSER*WMTCFSSISRR
Trigger: GCGCCTGGAGATTGAACTGAAGCAGGTCATCCAGCAGCGCTCAGAGGACAACGCCAGGCACAAGCAGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp CCTTTGCGGATGGCTTCTTCGGTGCTGATCCTCCCATaGACTTCCGGGTCAACAAGGCCTCCCGTGAGGAAC +
Preference number: 6 (lower is better)
Translates to: PLRMASSVLILP*TSGSTRPPVRN
Trigger: GTTCCTCACGGGAGGCCTTGTTGACCCGGAAGTGCATGGGAGGATCAGCACCGAAGAAGCCATCCGCAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp TCTTTCTCTTGGCCTCCACCAAAGAGTACTTTTCCTTaGGAGAAGCGGAAGCCCCGGCGATGGCGCCTGCGC +
Preference number: 6 (lower is better)
Translates to: SFSWPPPKSTFP*EKRKPRRWRLR
Trigger: GCGCAGGCGCCATCGCCGGGGCTTCCGCTTCTCCCAAGGAAAAGTACTCTTTGGTGGAGGCCAAGAGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp TTCCGATGGGGATCGATGATACCACCGGTGGCTGCCTaGGCCTCCAGAAGCATGACAGTGGATTCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: FRWGSMIPPVAA*ASRSMTVDSGV
Trigger: CACCCCAGAATCCACTGTCATGCTTCTGGAGGCCCAGGCAGCCACCGGTGGTATCATCGATCCCCATCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp GCTACGGCATTGTCCACAGTGAGCTTCTCATTCCGATaGGGATCGATGATACCACCGGTGGCTGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: ATALSTVSFSFR*GSMIPPVAAWA
Trigger: GGCCCAGGCAGCCACCGGTGGTATCATCGATCCCCATCGGAATGAGAAGCTCACTGTGGACAATGCCGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp TTCTGGGCATCGGTGAACTGGGACTGCATCCGCCGCTaGTCGTCGTCTCCAAACATCTCCGAGCCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: FWASVNWDCIRR*SSSPNISEPWL
Trigger: CAGCCAAGGCTCGGAGATGTTTGGAGACGACGACAAGCGGCGGATGCAGTCCCAGTTCACCGATGCCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp CAGCTCATCCTCCAGCCGCTGCAGCCTCGCCTTGTCTaGCTCCAGGACTTTGATCTTCACCAGCAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: QLILQPLQPRLV*LQDFDLHQQAL
Trigger: GAGAGCCTGCTGGTGAAGATCAAAGTCCTGGAGCAAGACAAGGCGAGGCTGCAGCGGCTGGAGGATGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp TGGATGGTCTTGGCAGCCTCCTCCAGGGACTGCTTGTGCCTGGCGTaGTCCTCTGAGCGCTGCTGGATGACCTGCTTCAGTTCAATCTCC +
Preference number: 6 (lower is better)
Translates to: WMVLAASSRDCLCLA*SSERCWMTCFSSIS
Trigger: GGAGATTGAACTGAAGCAGGTCATCCAGCAGCGCTCAGAGGACAACGCCAGGCACAAGCAGTCCCTGGAGGAGGCTGCCAAGACCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 90 bp GTGATGAATTTCTTTCTCTTGGCCTCCACCAAAGAGTACTTTTCCTaGGGAGAAGCGGAAGCCCCGGCGATGGCGCCTGCGCCGCGCAGG +
Preference number: 6 (lower is better)
Translates to: VMNFFLLASTKEYFS*GEAEAPAMAPAPRR
Trigger: CCTGCGCGGCGCAGGCGCCATCGCCGGGGCTTCCGCTTCTCCCAAGGAAAAGTACTCTTTGGTGGAGGCCAAGAGAAAGAAATTCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp GGACGCCTGCTCCAGCTGCTGGGTCAGGTTGGTGATTTTGACGGCTaGCTCTTTCAAAGACCTCCTCATGGCCTCCAGTTCCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GRLLQLLGQVGDFDG*LFQRPPHGLQFLLQ
Trigger: CTGGAGGAGGAACTGGAGGCCATGAGGAGGTCTTTGAAAGAGCAAGCCGTCAAAATCACCAACCTGACCCAGCAGCTGGAGCAGGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 72 bp GCTTGTGCCTGGCGTTGTCCTCTGAGCGCTGCTGGATaGCCTGCTTCAGTTCAATCTCCAGGCGCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: ACAWRCPLSAAG*PASVQSPGAAS
Trigger: AGAAGCAGCGCCTGGAGATTGAACTGAAGCAGGTCATCCAGCAGCGCTCAGAGGACAACGCCAGGCACAAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 72 bp TGGCCTTCTGCTGCTGGGCGTTCTCTTCGACCCTCCTaGGGTTCTCGGTGGTCTGGGCTAGAGTGTTCTTCA +
Preference number: 6 (lower is better)
Translates to: WPSAAGRSLRPS*GSRWSGLECSS
Trigger: TGAAGAACACTCTAGCCCAGACCACCGAGAACCTCAGGAGGGTCGAAGAGAACGCCCAGCAGCAGAAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp CACATGATCTCTCGAGAGGTGGCCTGGATGATGTTCTaGAGCTGGCGCAGGTGGTCCATCCTCTCGAAGGAG +
Preference number: 6 (lower is better)
Translates to: HMISREVAWMMF*SWRRWSILSKE
Trigger: CTCCTTCGAGAGGATGGACCACCTGCGCCAGCTGCAGAACATCATCCAGGCCACCTCTCGAGAGATCATGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp TGTCCACGCCTCCTGGGCCCGTCACGTACCACTTGCTaGGCTCGTTGTTGTCCTTCAGAATACACTCATCCC +
Preference number: 6 (lower is better)
Translates to: CPRLLGPSRTTC*ARCCPSEYTHP
Trigger: GGGATGAGTGTATTCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCAGGAGGCGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp GCGTTCTCCTCGGCTCTCCTTCGCTGCTCCGTGGCCTaGAAGATGCTGTCATTGAGCCTGACTATCTCATCC +
Preference number: 6 (lower is better)
Translates to: AFSSALLRCSVA*KMLSLSLTISS
Trigger: GGATGAGATAGTCAGGCTCAATGACAGCATCTTGCAGGCCACGGAGCAGCGAAGGAGAGCCGAGGAGAACGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp AGCTCATCCTCCAGCCGCTGCAGCCTCGCCTTGTCTTaGTCCAGGACTTTGATCTTCACCAGCAGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: SSSSSRCSLALS*SRTLIFTSRLS
Trigger: AGAGAGCCTGCTGGTGAAGATCAAAGTCCTGGAGCAAGACAAGGCGAGGCTGCAGCGGCTGGAGGATGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp GTTGCTTTGGCACGGTTCAGCTCATCCTCCAGCCGCTaGAGCCTCGCCTTGTCTTGCTCCAGGACTTTGATC +
Preference number: 6 (lower is better)
Translates to: VALARFSSSSSR*SLALSCSRTLI
Trigger: GATCAAAGTCCTGGAGCAAGACAAGGCGAGGCTGCAGCGGCTGGAGGATGAGCTGAACCGTGCCAAAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp GAGGTGGCCTGGATGATGTTCTGCAGCTGGCGCAGGTaGTCCATCCTCTCGAAGGAGGCTTTCAGCAGGTTT +
Preference number: 6 (lower is better)
Translates to: EVAWMMFCSWRR*SILSKEAFSRF
Trigger: AAACCTGCTGAAAGCCTCCTTCGAGAGGATGGACCACCTGCGCCAGCTGCAGAACATCATCCAGGCCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp ATCTCTCGAGAGGTGGCCTGGATGATGTTCTGCAGCTaGCGCAGGTGGTCCATCCTCTCGAAGGAGGCTTTC +
Preference number: 6 (lower is better)
Translates to: ISREVAWMMFCS*RRWSILSKEAF
Trigger: GAAAGCCTCCTTCGAGAGGATGGACCACCTGCGCCAGCTGCAGAACATCATCCAGGCCACCTCTCGAGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp GTACTGCTCAATCTTGCAAGAAAGGTCCACAGCCAGTaGGTTCGGAGGCGGGATGATCAGGCCCACGGAAGG +
Preference number: 6 (lower is better)
Translates to: VLLNLARKVHSQ*VRRRDDQAHGR
Trigger: CCTTCCGTGGGCCTGATCATCCCGCCTCCGAACCCACTGGCTGTGGACCTTTCTTGCAAGATTGAGCAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp CCAACTGCTGTTTCCTCTGAGACATCTCTGAGCCAGTaGCCTTCTGCTGCTGGGCGTTCTCTTCGACCCTCC +
Preference number: 6 (lower is better)
Translates to: PTAVSSETSLSQ*PSAAGRSLRPS
Trigger: GGAGGGTCGAAGAGAACGCCCAGCAGCAGAAGGCCACTGGCTCAGAGATGTCTCAGAGGAAACAGCAGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 72 bp TTCTTTCTCTTGGCCTCCACCAAAGAGTACTTTTCCTaGGGAGAAGCGGAAGCCCCGGCGATGGCGCCTGCG +
Preference number: 6 (lower is better)
Translates to: FFLLASTKEYFS*GEAEAPAMAPA
Trigger: CGCAGGCGCCATCGCCGGGGCTTCCGCTTCTCCCAAGGAAAAGTACTCTTTGGTGGAGGCCAAGAGAAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp CGGTCGTCGAAGTCGATGAGATCCCGGGCTACGGCATaGTCCACAGTGAGCTTCTCATTCCGATGGGGATCG +
Preference number: 6 (lower is better)
Translates to: RSSKSMRSRATA*STVSFSFRWGS
Trigger: CGATCCCCATCGGAATGAGAAGCTCACTGTGGACAATGCCGTAGCCCGGGATCTCATCGACTTCGACGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp ACGGAGTCGTGTCGGGAGCTGCTAAAAACATCATCGTaGACACTCCCACCCAAGCCGCTGCTGTTGCCGACG +
Preference number: 6 (lower is better)
Translates to: TESCRELLKTSS*TLPPKPLLLPT
Trigger: CGTCGGCAACAGCAGCGGCTTGGGTGGGAGTGTCAACGATGATGTTTTTAGCAGCTCCCGACACGACTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp GAAGGGACAAGCATGTCCACGCCTCCTGGGCCCGTCACGTACCACTaGCTGCGCTCGTTGTTGTCCTTCAGAATACACTCATCCCCTTTG +
Preference number: 6 (lower is better)
Translates to: EGTSMSTPPGPVTYH*LRSLLSFRIHSSPL
Trigger: CAAAGGGGATGAGTGTATTCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCAGGAGGCGTGGACATGCTTGTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp ACCTCGGCCAGGGCTTGGGAGTCGTTCTGTACGCTCTTGAGCTCGTaGATTTTCACGGTGATGTGGTGTGTAGAGCCTTGCTCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: TSARAWESFCTLLSS*IFTVMWCVEPCSAS
Trigger: GCTGGCAGAGCAAGGCTCTACACACCACATCACCGTGAAAATCAACGAGCTCAAGAGCGTACAGAACGACTCCCAAGCCCTGGCCGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp TCCTCGGCTCTCCTTCGCTGCTCCGTGGCCTGCAAGATGCTGTCATaGAGCCTGACTATCTCATCCTTAAGATCTCGGTTCTCCCGGGAG +
Preference number: 6 (lower is better)
Translates to: SSALLRCSVACKMLS*SLTISSLRSRFSRE
Trigger: CTCCCGGGAGAACCGAGATCTTAAGGATGAGATAGTCAGGCTCAATGACAGCATCTTGCAGGCCACGGAGCAGCGAAGGAGAGCCGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 90 bp AAAGACCTCCTCATGGCCTCCAGTTCCTCCTCCAGCATCTTCCTCTaGGAGGACTCGTCGGAGGCTGTTCTCTTCAGCCTACTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: KDLLMASSSSSSIFL*EDSSEAVLFSLLSS
Trigger: GGAGCTGAGTAGGCTGAAGAGAACAGCCTCCGACGAGTCCTCCAAGAGGAAGATGCTGGAGGAGGAACTGGAGGCCATGAGGAGGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 90 bp CGGGTCATCGAAACCAGTGATGGCTTTCTCCGCTGTGTAGATCTGTaGGCGGTCGTCGAAGTCGATGAGATCCCGGGCTACGGCATTGTC +
Preference number: 6 (lower is better)
Translates to: RVIETSDGFLRCVDL*AVVEVDEIPGYGIV
Trigger: GACAATGCCGTAGCCCGGGATCTCATCGACTTCGACGACCGCCAACAGATCTACACAGCGGAGAAAGCCATCACTGGTTTCGATGACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp ACCTGTCGGAGCTCGATCTCCAACTGCTGTTTCCTCTaGGACATCTCTGAGCCAGTGGCCTTCTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: TCRSSISNCCFL*DISEPVAFCCW
Trigger: CCAGCAGCAGAAGGCCACTGGCTCAGAGATGTCTCAGAGGAAACAGCAGTTGGAGATCGAGCTCCGACAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 72 bp GCCGCTGCAGCCTCGCCTTGTCTTGCTCCAGGACTTTaGTCTTCACCAGCAGGCTCTCTCTCTCCTGAACAA +
Preference number: 6 (lower is better)
Translates to: AAAASPCLAPGL*SSPAGSLSPEQ
Trigger: TTGTTCAGGAGAGAGAGAGCCTGCTGGTGAAGATCAAAGTCCTGGAGCAAGACAAGGCGAGGCTGCAGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp TGCTTCTCCCTCACGTGGCCATCCAGCACATCCCTCTaGTGCCTGAGGTCATCCTCGCTCCTCTTCTTAACA +
Preference number: 6 (lower is better)
Translates to: CFSLTWPSSTSL*CLRSSSLLFLT
Trigger: TGTTAAGAAGAGGAGCGAGGATGACCTCAGGCAGCAGAGGGATGTGCTGGATGGCCACGTGAGGGAGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp CTTCTCACACTCCAGACGCTGTTTCACCCGGCTTTCTaGCTCCAGCGTTGCTTTGGCACGGTTCAGCTCATC +
Preference number: 6 (lower is better)
Translates to: LLTLQTLFHPAF*LQRCFGTVQLI
Trigger: GATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGCAGAAAGCCGGGTGAAACAGCGTCTGGAGTGTGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp GCGTTCTCTTCGACCCTCCTGAGGTTCTCGGTGGTCTaGGCTAGAGTGTTCTTCAGCCTCTTGACCTCCTCA +
Preference number: 6 (lower is better)
Translates to: AFSSTLLRFSVV*ARVFFSLLTSS
Trigger: TGAGGAGGTCAAGAGGCTGAAGAACACTCTAGCCCAGACCACCGAGAACCTCAGGAGGGTCGAAGAGAACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 72 bp TCATGGCCTCCAGTTCCTCCTCCAGCATCTTCCTCTTaGAGGACTCGTCGGAGGCTGTTCTCTTCAGCCTAC +
Preference number: 6 (lower is better)
Translates to: SWPPVPPPASSS*RTRRRLFSSAY
Trigger: GTAGGCTGAAGAGAACAGCCTCCGACGAGTCCTCCAAGAGGAAGATGCTGGAGGAGGAACTGGAGGCCATGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 72 bp CTGTTGACTGGATCAACTACACCCCCTGAAGCAAGCTaGGCTTCCAGCAGGCGCATTCCGGTTTCTCTGTCG +
Preference number: 6 (lower is better)
Translates to: LLTGSTTPPEAS*ASSRRIPVSLS
Trigger: CGACAGAGAAACCGGAATGCGCCTGCTGGAAGCCCAGCTTGCTTCAGGGGGTGTAGTTGATCCAGTCAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp CTCATGGCCTCCAGTTCCTCCTCCAGCATCTTCCTCTaGGAGGACTCGTCGGAGGCTGTTCTCTTCAGCCTA +
Preference number: 6 (lower is better)
Translates to: LMASSSSSSIFL*EDSSEAVLFSL
Trigger: TAGGCTGAAGAGAACAGCCTCCGACGAGTCCTCCAAGAGGAAGATGCTGGAGGAGGAACTGGAGGCCATGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 72 bp ATTGCTGACGGGATCCACAATAAAGCCAGTAGCTGCTaGGGCTTCCAGCAACTCCAGGGCGGTACCAGGTCG +
Preference number: 6 (lower is better)
Translates to: IADGIHNKASSC*GFQQLQGGTRS
Trigger: CGACCTGGTACCGCCCTGGAGTTGCTGGAAGCCCAAGCAGCTACTGGCTTTATTGTGGATCCCGTCAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp CCAGGTTCTCTGTGTCAAAGATGGCCGCAATGGGGCTaGACTCCTCCAGAGGGTCTGACAGAGAGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: PGSLCQRWPQWG*TPPEGLTESCF
Trigger: GAAGCAGCTCTCTGTCAGACCCTCTGGAGGAGTCAAGCCCCATTGCGGCCATCTTTGACACAGAGAACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp GGCCTTCTGGGCAGGCTTCAGCCTGGTGGCCATGTCTaGGTCAATGAGACCCTGGTTGACTGCATCTTGAAG +
Preference number: 6 (lower is better)
Translates to: GLLGRLQPGGHV*VNETLVDCILK
Trigger: CTTCAAGATGCAGTCAACCAGGGTCTCATTGACCAAGACATGGCCACCAGGCTGAAGCCTGCCCAGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp ATCAGCCCACGGGCCAAGGCGACATCTTTTGGCAAGAAGACACTGTaGACTGGATCAACTACACCCCCTGAAGCAAGCTGGGCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: ISPRAKATSFGKKTL*TGSTTPPEASWASS
Trigger: GCTGGAAGCCCAGCTTGCTTCAGGGGGTGTAGTTGATCCAGTCAACAGTGTCTTCTTGCCAAAAGATGTCGCCTTGGCCCGTGGGCTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp CGGCTGCGCGATCAGCTCCGCCCGCATCAGACAGTCTaGGCAATTTTGCAGCATTTCTTGGATGGTGTTCTG +
Preference number: 6 (lower is better)
Translates to: RLRDQLRPHQTV*AILQHFLDGVL
Trigger: CAGAACACCATCCAAGAAATGCTGCAAAATTGCTCAGACTGTCTGATGCGGGCGGAGCTGATCGCGCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp TTTGCCAGCGGTCCGTCAGCTGGGTCACTTTCTCAGTaGATTTGCCCAGGTCCAGGTCATAGAGCGGGTACT +
Preference number: 6 (lower is better)
Translates to: FASGPSAGSLSQ*ICPGPGHRAGT
Trigger: AGTACCCGCTCTATGACCTGGACCTGGGCAAATTCACTGAGAAAGTGACCCAGCTGACGGACCGCTGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp CCCAGCGCCGCTTGGCCTCCTCCTGATACTCAGCTTTaGGCCTTTCGATCTCTTTGTTCTTGTCCTGGATGG +
Preference number: 6 (lower is better)
Translates to: PSAAWPPPDTQL*AFRSLCSCPGW
Trigger: CCATCCAGGACAAGAACAAAGAGATCGAAAGGCTCAAAGCTGAGTATCAGGAGGAGGCCAAGCGGCGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 72 bp CCTTCTGGAAATGCTCATTCCTCAAGTGAGCCTGCTTaGCATTCTCCTGTTCCTGGACCAGCTGCCGCCGGA +
Preference number: 6 (lower is better)
Translates to: PSGNAHSSSEPA*HSPVPGPAAAG
Trigger: TCCGGCGGCAGCTGGTCCAGGAACAGGAGAATGTCAAGCAGGCTCACTTGAGGAATGAGCATTTCCAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp ACCTGCTTCAGTTCAATCTCCAGGCGCTGCTTCTTCTaGATGGTTTCCGAGCCACAGGCTTTCTGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: TCFSSISRRCFF*MVSEPQAFCCR
Trigger: CCTGCAGCAGAAAGCCTGTGGCTCGGAAACCATGCAGAAGAAGCAGCGCCTGGAGATTGAACTGAAGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp TTCTCCCTCACGTGGCCATCCAGCACATCCCTCTGCTaGCTGAGGTCATCCTCGCTCCTCTTCTTAACAATG +
Preference number: 6 (lower is better)
Translates to: FSLTWPSSTSLC*LRSSSLLFLTM
Trigger: CATTGTTAAGAAGAGGAGCGAGGATGACCTCAGGCAGCAGAGGGATGTGCTGGATGGCCACGTGAGGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 72 bp CCGGTTGCGATCTGTGCCTCCAGCAAGCGAATGCCATaGCCCTTTTCGATGAGCTCCTTGTTCATTGCTTGG +
Preference number: 6 (lower is better)
Translates to: PVAICASSKRMP*PFSMSSLFIAW
Trigger: CCAAGCAATGAACAAGGAGCTCATCGAAAAGGGCCATGGCATTCGCTTGCTGGAGGCACAGATCGCAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp CCTGGGCCCGTCACGTACCACTTGCTGCGCTCGTTGTaGTCCTTCAGAATACACTCATCCCCTTTGTGTACG +
Preference number: 6 (lower is better)
Translates to: PGPVTYHLLRSL*SFRIHSSPLCT
Trigger: CGTACACAAAGGGGATGAGTGTATTCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp CCTCCTGGGCCCGTCACGTACCACTTGCTGCGCTCGTaGTTGTCCTTCAGAATACACTCATCCCCTTTGTGT +
Preference number: 6 (lower is better)
Translates to: PPGPVTYHLLRS*LSFRIHSSPLC
Trigger: ACACAAAGGGGATGAGTGTATTCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp GAAACCAGTGATGGCTTTCTCCGCTGTGTAGATCTGTaGGCGGTCGTCGAAGTCGATGAGATCCCGGGCTAC +
Preference number: 6 (lower is better)
Translates to: ETSDGFLRCVDL*AVVEVDEIPGY
Trigger: GTAGCCCGGGATCTCATCGACTTCGACGACCGCCAACAGATCTACACAGCGGAGAAAGCCATCACTGGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp TCTTCGGACCCGAGGGACGCTGATGGCCTTGTAAAGGGCTCGCATTaGTTCCTGGAGCTGAAGCAGTCTTTTCTGATACGCATCACAGGG +
Preference number: 6 (lower is better)
Translates to: SSDPRDADGLVKGSH*FLELKQSFLIRITG
Trigger: CCCTGTGATGCGTATCAGAAAAGACTGCTTCAGCTCCAGGAACAAATGCGAGCCCTTTACAAGGCCATCAGCGTCCCTCGGGTCCGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp TCCACGCCTCCTGGGCCCGTCACGTACCACTTGCTGCGCTCGTTGTaGTCCTTCAGAATACACTCATCCCCTTTGTGTACGATTTTCTGG +
Preference number: 6 (lower is better)
Translates to: STPPGPVTYHLLRSL*SFRIHSSPLCTIFW
Trigger: CCAGAAAATCGTACACAAAGGGGATGAGTGTATTCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCAGGAGGCGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp CCATCGAGCTCAGCTTGTCTCTTGAGCTCCTCCAGGCTCACAAGCTaGGCCTTGAACTGGGAACACTCTGCCTGGTATTTCTGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: PSSSACLLSSSRLTS*ALNWEHSAWYFCRF
Trigger: GAACCTGCAGAAATACCAGGCAGAGTGTTCCCAGTTCAAGGCCAAGCTTGTGAGCCTGGAGGAGCTCAAGAGACAAGCTGAGCTCGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp CTCACACTGCCTTGCCTTCTGCAGCTGATCATAGTCATTCTTCTGTaGGTCGAACCTGTCCTCCACGGTCTTTCTCCGGCGCTTCTCGTC +
Preference number: 6 (lower is better)
Translates to: LTLPCLLQLIIVILL*VEPVLHGLSPALLV
Trigger: GACGAGAAGCGCCGGAGAAAGACCGTGGAGGACAGGTTCGACCAACAGAAGAATGACTATGATCAGCTGCAGAAGGCAAGGCAGTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp ATCTGTTGGCGGTCGTCGAAGTCGATGAGATCCCGGGCTACGGCATaGTCCACAGTGAGCTTCTCATTCCGATGGGGATCGATGATACCA +
Preference number: 6 (lower is better)
Translates to: ICWRSSKSMRSRATA*STVSFSFRWGSMIP
Trigger: TGGTATCATCGATCCCCATCGGAATGAGAAGCTCACTGTGGACAATGCCGTAGCCCGGGATCTCATCGACTTCGACGACCGCCAACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp ATCTTACTCACGGAGTCGTGTCGGGAGCTGCTAAAAACATCATCGTaGACACTCCCACCCAAGCCGCTGCTGTTGCCGACGCCGTTTTTC +
Preference number: 6 (lower is better)
Translates to: ILLTESCRELLKTSS*TLPPKPLLLPTPFF
Trigger: GAAAAACGGCGTCGGCAACAGCAGCGGCTTGGGTGGGAGTGTCAACGATGATGTTTTTAGCAGCTCCCGACACGACTCCGTGAGTAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp CCTGGTGGCCATGTCTTGGTCAATGAGACCCTGGTTGACTGCATCTaGAAGGGAGAGCTTCTGACCAGTGGTAGGGTGAATGATGCCACC +
Preference number: 6 (lower is better)
Translates to: PGGHVLVNETLVDCI*KGELLTSGRVNDAT
Trigger: GGTGGCATCATTCACCCTACCACTGGTCAGAAGCTCTCCCTTCAAGATGCAGTCAACCAGGGTCTCATTGACCAAGACATGGCCACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp GGGCCAAGGCGACATCTTTTGGCAAGAAGACACTGTTaGCTGGATCAACTACACCCCCTGAAGCAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: GPRRHLLARRHC*LDQLHPLKQAG
Trigger: CCCAGCTTGCTTCAGGGGGTGTAGTTGATCCAGTCAACAGTGTCTTCTTGCCAAAAGATGTCGCCTTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp TGCTGGATGACCTGCTTCAGTTCAATCTCCAGGCGCTaGTTCTTCTGCATGGTTTCCGAGCCACAGGCTTTC +
Preference number: 6 (lower is better)
Translates to: CWMTCFSSISRR*FFCMVSEPQAF
Trigger: GAAAGCCTGTGGCTCGGAAACCATGCAGAAGAAGCAGCGCCTGGAGATTGAACTGAAGCAGGTCATCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp GTAGGCGCGTTAACTCCTGTTCCTGAACCTTCAGTTTaGTCATGGCCTCCGTGGCGCTGTTGTTGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: VGALTPVPEPSV*SWPPWRCCWLS
Trigger: AGAAAGCCAACAACAGCGCCACGGAGGCCATGAGCAAACTGAAGGTTCAGGAACAGGAGTTAACGCGCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp TCCAGCTGCTGGGTCAGGTTGGTGATTTTGACGGCTTaGTCTTTCAAAGACCTCCTCATGGCCTCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: SSCWVRLVILTA*SFKDLLMASSS
Trigger: GGAACTGGAGGCCATGAGGAGGTCTTTGAAAGAGCAAGCCGTCAAAATCACCAACCTGACCCAGCAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp AGGTCATCCTCGCTCCTCTTCTTAACAATGGACGCCTaGTCCAGCTGCTGGGTCAGGTTGGTGATTTTGACG +
Preference number: 6 (lower is better)
Translates to: RSSSLLFLTMDA*SSCWVRLVILT
Trigger: CGTCAAAATCACCAACCTGACCCAGCAGCTGGAGCAGGCGTCCATTGTTAAGAAGAGGAGCGAGGATGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp AGCCCCTGCAGCTCGAGGGTTCGATTGTTGCTGATCTaGAGTTGGCTCCTTAGCTCGGAGATGGTTGAGTTT +
Preference number: 6 (lower is better)
Translates to: SPCSSRVRLLLI*SWLLSSEMVEF
Trigger: AAACTCAACCATCTCCGAGCTAAGGAGCCAACTGCAGATCAGCAACAATCGAACCCTCGAGCTGCAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp GGTGGCCATGTCTTGGTCAATGAGACCCTGGTTGACTaGATCTTGAAGGGAGAGCTTCTGACCAGTGGTAGG +
Preference number: 6 (lower is better)
Translates to: GGHVLVNETLVD*ILKGELLTSGR
Trigger: CCTACCACTGGTCAGAAGCTCTCCCTTCAAGATGCAGTCAACCAGGGTCTCATTGACCAAGACATGGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp TTTGGCATAGCTGCTGATGTCCTGCAACCTCTGAGCTaGACGGCCATCGATGAAACCTTTGCGGATGGCTTC +
Preference number: 6 (lower is better)
Translates to: FGIAADVLQPLS*TAIDETFADGF
Trigger: GAAGCCATCCGCAAAGGTTTCATCGATGGCCGTGCAGCTCAGAGGTTGCAGGACATCAGCAGCTATGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp CCTTCAGTTTGCTCATGGCCTCCGTGGCGCTGTTGTTaGCTTTCTGCAGGTCATACTGGACTCTCTGCAACT +
Preference number: 6 (lower is better)
Translates to: PSVCSWPPWRCC*LSAGHTGLSAT
Trigger: AGTTGCAGAGAGTCCAGTATGACCTGCAGAAAGCCAACAACAGCGCCACGGAGGCCATGAGCAAACTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 72 bp CCTGTTCCTGAACCTTCAGTTTGCTCATGGCCTCCGTaGCGCTGTTGTTGGCTTTCTGCAGGTCATACTGGA +
Preference number: 6 (lower is better)
Translates to: PVPEPSVCSWPP*RCCWLSAGHTG
Trigger: TCCAGTATGACCTGCAGAAAGCCAACAACAGCGCCACGGAGGCCATGAGCAAACTGAAGGTTCAGGAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 72 bp CCGTCACCTTCTTCCTCAGCCCATCAAATACCAGCTTaGAGGAATCAACGGTCCACTCGTATTCCGTCTGGG +
Preference number: 6 (lower is better)
Translates to: PSPSSSAHQIPA*RNQRSTRIPSG
Trigger: CCCAGACGGAATACGAGTGGACCGTTGATTCCTCCAAGCTGGTATTTGATGGGCTGAGGAAGAAGGTGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp CTTCTCTTCTGTACTGACAGCAGGAGCAGACCCGTGTaGGGTTCGATTCTGCACCTTTCTCTCAGCTGCATG +
Preference number: 6 (lower is better)
Translates to: LLFCTDSRSRPV*GSILHLSLSCM
Trigger: CATGCAGCTGAGAGAAAGGTGCAGAATCGAACCCCACACGGGTCTGCTCCTGCTGTCAGTACAGAAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp ACCAGTTCGGTGACGGTCACGGGTTGTCTGATTCCCTaGAAGGACATGCTTCTCTTCTGTACTGACAGCAGG +
Preference number: 6 (lower is better)
Translates to: TSSVTVTGCLIP*KDMLLFCTDSR
Trigger: CCTGCTGTCAGTACAGAAGAGAAGCATGTCCTTCCAGGGAATCAGACAACCCGTGACCGTCACCGAACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp TTTTCTCCAGGTTCTCTGTGTCAAAGATGGCCGCAATaGGGCTTGACTCCTCCAGAGGGTCTGACAGAGAGC +
Preference number: 6 (lower is better)
Translates to: FSPGSLCQRWPQ*GLTPPEGLTES
Trigger: GCTCTCTGTCAGACCCTCTGGAGGAGTCAAGCCCCATTGCGGCCATCTTTGACACAGAGAACCTGGAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp CGATCGAGATTTTCTCCAGGTTCTCTGTGTCAAAGATaGCCGCAATGGGGCTTGACTCCTCCAGAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: RSRFSPGSLCQR*PQWGLTPPEGL
Trigger: CAGACCCTCTGGAGGAGTCAAGCCCCATTGCGGCCATCTTTGACACAGAGAACCTGGAGAAAATCTCGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp TTTCCTTTTACCCCTTCAAAGCCGATGAAGGCCTTCTaGGCAGGCTTCAGCCTGGTGGCCATGTCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: FPFTPSKPMKAF*AGFSLVAMSWS
Trigger: TGACCAAGACATGGCCACCAGGCTGAAGCCTGCCCAGAAGGCCTTCATCGGCTTTGAAGGGGTAAAAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp CCGAGGGACGCTGATGGCCTTGTAAAGGGCTCGCATTaGTTCCTGGAGCTGAAGCAGTCTTTTCTGATACGC +
Preference number: 6 (lower is better)
Translates to: PRDADGLVKGSH*FLELKQSFLIR
Trigger: GCGTATCAGAAAAGACTGCTTCAGCTCCAGGAACAAATGCGAGCCCTTTACAAGGCCATCAGCGTCCCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp ACCTCGGCCAGGGCTTGGGAGTCGTTCTGTACGCTCTaGAGCTCGTTGATTTTCACGGTGATGTGGTGTGTA +
Preference number: 6 (lower is better)
Translates to: TSARAWESFCTL*SSLIFTVMWCV
Trigger: TACACACCACATCACCGTGAAAATCAACGAGCTCAAGAGCGTACAGAACGACTCCCAAGCCCTGGCCGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp CCTTGCCTTCTGCAGCTGATCATAGTCATTCTTCTGTaGGTCGAACCTGTCCTCCACGGTCTTTCTCCGGCG +
Preference number: 6 (lower is better)
Translates to: PCLLQLIIVILL*VEPVLHGLSPA
Trigger: CGCCGGAGAAAGACCGTGGAGGACAGGTTCGACCAACAGAAGAATGACTATGATCAGCTGCAGAAGGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp TTCTCGGTGGTCTGGGCTAGAGTGTTCTTCAGCCTCTaGACCTCCTCACACAAGCTCCTGTTTTCTCGGGTG +
Preference number: 6 (lower is better)
Translates to: FSVVWARVFFSL*TSSHKLLFSRV
Trigger: CACCCGAGAAAACAGGAGCTTGTGTGAGGAGGTCAAGAGGCTGAAGAACACTCTAGCCCAGACCACCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 72 bp ACCTTCAGTTTGCTCATGGCCTCCGTGGCGCTGTTGTaGGCTTTCTGCAGGTCATACTGGACTCTCTGCAAC +
Preference number: 6 (lower is better)
Translates to: TFSLLMASVALL*AFCRSYWTLCN
Trigger: GTTGCAGAGAGTCCAGTATGACCTGCAGAAAGCCAACAACAGCGCCACGGAGGCCATGAGCAAACTGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 72 bp CTCCAGCTGCTGGGTCAGGTTGGTGATTTTGACGGCTaGCTCTTTCAAAGACCTCCTCATGGCCTCCAGTTC +
Preference number: 6 (lower is better)
Translates to: LQLLGQVGDFDG*LFQRPPHGLQF
Trigger: GAACTGGAGGCCATGAGGAGGTCTTTGAAAGAGCAAGCCGTCAAAATCACCAACCTGACCCAGCAGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 72 bp GCCGTCACCTTCTTCCTCAGCCCATCAAATACCAGCTaGGAGGAATCAACGGTCCACTCGTATTCCGTCTGG +
Preference number: 6 (lower is better)
Translates to: AVTFFLSPSNTS*EESTVHSYSVW
Trigger: CCAGACGGAATACGAGTGGACCGTTGATTCCTCCAAGCTGGTATTTGATGGGCTGAGGAAGAAGGTGACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp ACATCATCGTTGACACTCCCACCCAAGCCGCTGCTGTaGCCGACGCCGTTTTTCAAGGAGATCATGTCAGCA +
Preference number: 6 (lower is better)
Translates to: TSSLTLPPKPLL*PTPFFKEIMSA
Trigger: TGCTGACATGATCTCCTTGAAAAACGGCGTCGGCAACAGCAGCGGCTTGGGTGGGAGTGTCAACGATGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp ATGTCCACGCCTCCTGGGCCCGTCACGTACCACTTGCTGCGCTCGTaGTTGTCCTTCAGAATACACTCATCCCCTTTGTGTACGATTTTC +
Preference number: 6 (lower is better)
Translates to: MSTPPGPVTYHLLRS*LSFRIHSSPLCTIF
Trigger: GAAAATCGTACACAAAGGGGATGAGTGTATTCTGAAGGACAACAACGAGCGCAGCAAGTGGTACGTGACGGGCCCAGGAGGCGTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp CTCCTGAGGTTCTCGGTGGTCTGGGCTAGAGTGTTCTTCAGCCTCTaGACCTCCTCACACAAGCTCCTGTTTTCTCGGGTGAGATTGTCT +
Preference number: 6 (lower is better)
Translates to: LLRFSVVWARVFFSL*TSSHKLLFSRVRLS
Trigger: AGACAATCTCACCCGAGAAAACAGGAGCTTGTGTGAGGAGGTCAAGAGGCTGAAGAACACTCTAGCCCAGACCACCGAGAACCTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 72 bp GGAGAGGCATATTCTTGTCACAGGGGTATTTCTTCCTaGTGGAGTCCTGCAGGCCCTTCAGGTAGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: GEAYSCHRGISS*WSPAGPSGRLQ
Trigger: CTGAAGCCTACCTGAAGGGCCTGCAGGACTCCATCAGGAAGAAATACCCCTGTGACAAGAATATGCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp TCCGCAGCCTCTTGCAGAATCACCCCGGATGGGGACTaGACCATGGTCCTCTTGATAGGTATGTTCAGTAGA +
Preference number: 6 (lower is better)
Translates to: SAASCRITPDGD*TMVLLIGMFSR
Trigger: TCTACTGAACATACCTATCAAGAGGACCATGGTTCAGTCCCCATCCGGGGTGATTCTGCAAGAGGCTGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp GCTTGTACCTCATGCTCTCTTCAGTTCGCATCTGAGTaGCCTGTCGGAGCTCGATCTCCAACTGCTGTTTCC +
Preference number: 6 (lower is better)
Translates to: ACTSCSLQFASE*PVGARSPTAVS
Trigger: GGAAACAGCAGTTGGAGATCGAGCTCCGACAGGTCACTCAGATGCGAACTGAAGAGAGCATGAGGTACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 72 bp ACATCTTCTTCTTTCCTTTTACCCCTTCAAAGCCGATaGAGGCCTTCTGGGCAGGCTTCAGCCTGGTGGCCA +
Preference number: 6 (lower is better)
Translates to: TSSSFLLPLQSR*RPSGQASAWWP
Trigger: TGGCCACCAGGCTGAAGCCTGCCCAGAAGGCCTTCATCGGCTTTGAAGGGGTAAAAGGAAAGAAGAAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp AGCAGGAGATTTTTAAGCGTCATCCTGGCCTCACAATaGTCCATCTGCCTGCGGATCTTCTGCAGCTCCATC +
Preference number: 6 (lower is better)
Translates to: SRRFLSVILASQ*SICLRIFCSSI
Trigger: GATGGAGCTGCAGAAGATCCGCAGGCAGATGGAGCATTGTGAGGCCAGGATGACGCTTAAAAATCTCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp TCATTTTCATACTCTCTCTTCCGGGCGCCCTCTTCCTaGAGCAGAACCCTCAACCTCTCTATCTCGTACTCC +
Preference number: 6 (lower is better)
Translates to: SFSYSLFRAPSS*SRTLNLSISYS
Trigger: GGAGTACGAGATAGAGAGGTTGAGGGTTCTGCTGCAGGAAGAGGGCGCCCGGAAGAGAGAGTATGAAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp CGTCTTGTCGATCAGCTGGCACTCATAGAGCTGCATTaGCGTCACCTTCTTCCTCAGCCCATCAAATACCAG +
Preference number: 6 (lower is better)
Translates to: RLVDQLALIELH*RHLLPQPIKYQ
Trigger: CTGGTATTTGATGGGCTGAGGAAGAAGGTGACGGCAATGCAGCTCTATGAGTGCCAGCTGATCGACAAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp TCCGTGGCGCTGTTGTTGGCTTTCTGCAGGTCATACTaGACTCTCTGCAACTTGGAATTTTCGTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SVALLLAFCRSY*TLCNLEFSSSR
Trigger: CCTGGAGGACGAAAATTCCAAGTTGCAGAGAGTCCAGTATGACCTGCAGAAAGCCAACAACAGCGCCACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 72 bp GGTGTTCTGATTCTGATGTCTAGACATGGTGCCGGTTaGACAGTAGCCGTCGGAGTTCTGGTCGTTGACGGT +
Preference number: 6 (lower is better)
Translates to: GVLILMSRHGAG*TVAVGVLVVDG
Trigger: ACCGTCAACGACCAGAACTCCGACGGCTACTGTCAAACCGGCACCATGTCTAGACATCAGAATCAGAACACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp AGGGCTTGGGAGTCGTTCTGTACGCTCTTGAGCTCGTaGATTTTCACGGTGATGTGGTGTGTAGAGCCTTGC +
Preference number: 6 (lower is better)
Translates to: RAWESFCTLLSS*IFTVMWCVEPC
Trigger: GCAAGGCTCTACACACCACATCACCGTGAAAATCAACGAGCTCAAGAGCGTACAGAACGACTCCCAAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp CAGTTCAATGTATCTCGCATGAATGTCCGCAGCCTCTaGCAGAATCACCCCGGATGGGGACTGAACCATGGT +
Preference number: 6 (lower is better)
Translates to: QFNVSRMNVRSL*QNHPGWGLNHG
Trigger: ACCATGGTTCAGTCCCCATCCGGGGTGATTCTGCAAGAGGCTGCGGACATTCATGCGAGATACATTGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp TCATTAATCAGCCCCTGCAGCTCGAGGGTTCGATTGTaGCTGATCTGCAGTTGGCTCCTTAGCTCGGAGATG +
Preference number: 6 (lower is better)
Translates to: SLISPCSSRVRL*LICSWLLSSEM
Trigger: CATCTCCGAGCTAAGGAGCCAACTGCAGATCAGCAACAATCGAACCCTCGAGCTGCAGGGGCTGATTAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 90 bp CTAGAAGAATCCTCTAGCTTCCTCCTGCATCTCTCTTCGATCCTCTaGATCTCCGCCTGGAGCCTCTCGATCTCACTCCTGAGACTGTTC +
Preference number: 6 (lower is better)
Translates to: LEESSSFLLHLSSIL*ISAWSLSISLLRLF
Trigger: GAACAGTCTCAGGAGTGAGATCGAGAGGCTCCAGGCGGAGATCAAGAGGATCGAAGAGAGATGCAGGAGGAAGCTAGAGGATTCTTCTAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp AGATTTTCTCCAGGTTCTCTGTGTCAAAGATGGCCGCAATGGGGCTaGACTCCTCCAGAGGGTCTGACAGAGAGCTGCTTCGGATGGTTA +
Preference number: 6 (lower is better)
Translates to: RFSPGSLCQRWPQWG*TPPEGLTESCFGWL
Trigger: TAACCATCCGAAGCAGCTCTCTGTCAGACCCTCTGGAGGAGTCAAGCCCCATTGCGGCCATCTTTGACACAGAGAACCTGGAGAAAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp GCTCTTGAGCTCGTTGATTTTCACGGTGATGTGGTGTGTAGAGCCTaGCTCTGCCAGCAGGAGATTTTTAAGCGTCATCCTGGCCTCACA +
Preference number: 6 (lower is better)
Translates to: ALELVDFHGDVVCRA*LCQQEIFKRHPGLT
Trigger: TGTGAGGCCAGGATGACGCTTAAAAATCTCCTGCTGGCAGAGCAAGGCTCTACACACCACATCACCGTGAAAATCAACGAGCTCAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp GTTGGCAAGCATGTCTTTAAGCTGATTGAGAACCTCGGCCAGGGCTaGGGAGTCGTTCTGTACGCTCTTGAGCTCGTTGATTTTCACGGT +
Preference number: 6 (lower is better)
Translates to: VGKHVFKLIENLGQG*GVVLYALELVDFHG
Trigger: ACCGTGAAAATCAACGAGCTCAAGAGCGTACAGAACGACTCCCAAGCCCTGGCCGAGGTTCTCAATCAGCTTAAAGACATGCTTGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp GCTTCCAGCAGGCGCATTCCGGTTTCTCTGTCGATCAAATTCTTCTaGATGGCTTCTGAAACAGAGACCGTCTTGCCCGAAAACGGGTCA +
Preference number: 6 (lower is better)
Translates to: ASSRRIPVSLSIKFF*MASETETVLPENGS
Trigger: TGACCCGTTTTCGGGCAAGACGGTCTCTGTTTCAGAAGCCATCAAGAAGAATTTGATCGACAGAGAAACCGGAATGCGCCTGCTGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp TCTCCAGACCTCGTAAGCAGTTCAATGTATCTCGCATaGATGTCCGCAGCCTCTTGCAGAATCACCCCGGAT +
Preference number: 6 (lower is better)
Translates to: SPDLVSSSMYLA*MSAASCRITPD
Trigger: ATCCGGGGTGATTCTGCAAGAGGCTGCGGACATTCATGCGAGATACATTGAACTGCTTACGAGGTCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp CCACTAAGACCACCCTGGTGGAGCCGTCTGATCCTGTaGTGGTTATTTCTTCCCATTCGCACTCTTGTTCAC +
Preference number: 6 (lower is better)
Translates to: PLRPPWWSRLIL*WLFLPIRTLVH
Trigger: GTGAACAAGAGTGCGAATGGGAAGAAATAACCATCACAGGATCAGACGGCTCCACCAGGGTGGTCTTAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp GCAAACTGTGTGAGGCTAAGGCTGCCTGATCGGTATTaGTCGAAGAACTTCCTGTCAACGAGGCCCTTGTCA +
Preference number: 6 (lower is better)
Translates to: ANCVRLRLPDRY*SKNFLSTRPLS
Trigger: TGACAAGGGCCTCGTTGACAGGAAGTTCTTCGATCAATACCGATCAGGCAGCCTTAGCCTCACACAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp GGCTTGTGTAAAATACTCATCCAGCTCTCGGTTCCATaGCAGCTGCATCCCTTCTCCGAATTTCAGTTCCGG +
Preference number: 6 (lower is better)
Translates to: GLCKILIQLSVP*QLHPFSEFQFR
Trigger: CCGGAACTGAAATTCGGAGAAGGGATGCAGCTGGCATGGAACCGAGAGCTGGATGAGTATTTTACACAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp TTTTTAAGCGTCATCCTGGCCTCACAATGCTCCATCTaGCTGCGGATCTTCTGCAGCTCCATCAGCAACCAT +
Preference number: 6 (lower is better)
Translates to: FLSVILASQCSI*LRIFCSSISNH
Trigger: ATGGTTGCTGATGGAGCTGCAGAAGATCCGCAGGCAGATGGAGCATTGTGAGGCCAGGATGACGCTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp GATTTTCACGGTGATGTGGTGTGTAGAGCCTTGCTCTaGCAGCAGGAGATTTTTAAGCGTCATCCTGGCCTC +
Preference number: 6 (lower is better)
Translates to: DFHGDVVCRALL*QQEIFKRHPGL
Trigger: GAGGCCAGGATGACGCTTAAAAATCTCCTGCTGGCAGAGCAAGGCTCTACACACCACATCACCGTGAAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp TTGCTCATGGCCTCCGTGGCGCTGTTGTTGGCTTTCTaGAGGTCATACTGGACTCTCTGCAACTTGGAATTT +
Preference number: 6 (lower is better)
Translates to: LLMASVALLLAF*RSYWTLCNLEF
Trigger: AAATTCCAAGTTGCAGAGAGTCCAGTATGACCTGCAGAAAGCCAACAACAGCGCCACGGAGGCCATGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 72 bp ATGAATGTCCGCAGCCTCTTGCAGAATCACCCCGGATaGGGACTGAACCATGGTCCTCTTGATAGGTATGTT +
Preference number: 6 (lower is better)
Translates to: MNVRSLLQNHPG*GLNHGPLDRYV
Trigger: AACATACCTATCAAGAGGACCATGGTTCAGTCCCCATCCGGGGTGATTCTGCAAGAGGCTGCGGACATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp TTAACAATGGACGCCTGCTCCAGCTGCTGGGTCAGGTaGGTGATTTTGACGGCTTGCTCTTTCAAAGACCTC +
Preference number: 6 (lower is better)
Translates to: LTMDACSSCWVR*VILTACSFKDL
Trigger: GAGGTCTTTGAAAGAGCAAGCCGTCAAAATCACCAACCTGACCCAGCAGCTGGAGCAGGCGTCCATTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 72 bp AAATCATTAATCAGCCCCTGCAGCTCGAGGGTTCGATaGTTGCTGATCTGCAGTTGGCTCCTTAGCTCGGAG +
Preference number: 6 (lower is better)
Translates to: KSLISPCSSRVR*LLICSWLLSSE
Trigger: CTCCGAGCTAAGGAGCCAACTGCAGATCAGCAACAATCGAACCCTCGAGCTGCAGGGGCTGATTAATGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 72 bp TATGCCAGAATCAACCAGTTCGGTGACGGTCACGGGTaGTCTGATTCCCTGGAAGGACATGCTTCTCTTCTG +
Preference number: 6 (lower is better)
Translates to: YARINQFGDGHG*SDSLEGHASLL
Trigger: CAGAAGAGAAGCATGTCCTTCCAGGGAATCAGACAACCCGTGACCGTCACCGAACTGGTTGATTCTGGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp TCTCTCTGTAAATCATTAATCAGCCCCTGCAGCTCGAGGGTTCGATaGTTGCTGATCTGCAGTTGGCTCCTTAGCTCGGAGATGGTTGAG +
Preference number: 6 (lower is better)
Translates to: SLCKSLISPCSSRVR*LLICSWLLSSEMVE
Trigger: CTCAACCATCTCCGAGCTAAGGAGCCAACTGCAGATCAGCAACAATCGAACCCTCGAGCTGCAGGGGCTGATTAATGATTTACAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 72 bp CTCGGTTCTCCCGGGAGAGTCTGTCCATCTGGTTTCTaGGATTCTTGGAATCGTCTTCCTTCTGCATGGATA +
Preference number: 6 (lower is better)
Translates to: LGSPGRVCPSGF*DSWNRLPSAWI
Trigger: TATCCATGCAGAAGGAAGACGATTCCAAGAATCTCAGAAACCAGATGGACAGACTCTCCCGGGAGAACCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 72 bp TCATTTTCGTATTCCCAGCGCCGCTTGGCCTCCTCCTaGTACTCAGCTTTGAGCCTTTCGATCTCTTTGTTC +
Preference number: 6 (lower is better)
Translates to: SFSYSQRRLASS*YSALSLSISLF
Trigger: GAACAAAGAGATCGAAAGGCTCAAAGCTGAGTATCAGGAGGAGGCCAAGCGGCGCTGGGAATACGAAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 72 bp TGCCTGCTATGCAGCTTGAACCCTGGAGGAAGTCCTTaGTTCTCTCCCCAACCTCATCATAGGAAATCTGAC +
Preference number: 6 (lower is better)
Translates to: CLLCSLNPGGSP*FSPQPHHRKSD
Trigger: GTCAGATTTCCTATGATGAGGTTGGGGAGAGAATCAAGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp ACTATGACCACCCGCCGCTTTCTGAGCGTGTTCTTCTaGGAAGTCTGCACCTGTTTCTTCTTCTCTTTCAGG +
Preference number: 6 (lower is better)
Translates to: TMTTRRFLSVFF*EVCTCFFFSFR
Trigger: CCTGAAAGAGAAGAAGAAACAGGTGCAGACTTCTCAGAAGAACACGCTCAGAAAGCGGCGGGTGGTCATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp CGTTCTTTCTCCAGCTCTTTGATCTGCTCCAGCAGGTaGTGGAGAGGCATATTCTTGTCACAGGGGTATTTC +
Preference number: 6 (lower is better)
Translates to: RSFSSSLICSSR*WRGIFLSQGYF
Trigger: GAAATACCCCTGTGACAAGAATATGCCTCTCCAGCACCTGCTGGAGCAGATCAAAGAGCTGGAGAAAGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp CTTCTGCCAGCTGAGGTTCTCCTTCTCACACTGCCTTaGCTTCTGCAGCTGATCATAGTCATTCTTCTGTTG +
Preference number: 6 (lower is better)
Translates to: LLPAEVLLLTLP*LLQLIIVILLL
Trigger: CAACAGAAGAATGACTATGATCAGCTGCAGAAGGCAAGGCAGTGTGAGAAGGAGAACCTCAGCTGGCAGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp AGTCTGGGTTCCGAGGTTTCAGCTGCACGATCTTCTTaGACTTGTTTACCAAGTTCTGCACCTGACGCTTGT +
Preference number: 6 (lower is better)
Translates to: SLGSEVSAARSS*TCLPSSAPDAC
Trigger: ACAAGCGTCAGGTGCAGAACTTGGTAAACAAGTCCAAGAAGATCGTGCAGCTGAAACCTCGGAACCCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp ATCTGTTTATCTATCTTTTGCCAGCGGTCCGTCAGCTaGGTCACTTTCTCAGTGAATTTGCCCAGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: ICLSIFCQRSVS*VTFSVNLPRSR
Trigger: CCTGGACCTGGGCAAATTCACTGAGAAAGTGACCCAGCTGACGGACCGCTGGCAAAAGATAGATAAACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp TGCAGCTCGAGGGTTCGATTGTTGCTGATCTGCAGTTaGCTCCTTAGCTCGGAGATGGTTGAGTTTTTATCG +
Preference number: 6 (lower is better)
Translates to: CSSRVRLLLICS*LLSSEMVEFLS
Trigger: CGATAAAAACTCAACCATCTCCGAGCTAAGGAGCCAACTGCAGATCAGCAACAATCGAACCCTCGAGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CCA 72 bp TCTATCAATCAGCCCACGGGCCAAGGCGACATCTTTTaGCAAGAAGACACTGTTGACTGGATCAACTACACC +
Preference number: 6 (lower is better)
Translates to: SINQPTGQGDIF*QEDTVDWINYT
Trigger: GGTGTAGTTGATCCAGTCAACAGTGTCTTCTTGCCAAAAGATGTCGCCTTGGCCCGTGGGCTGATTGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp GAACTTCCTGTCAACGAGGCCCTTGTCAATAGCATCTaGAATGTCATACTGACTGCCGGTCTTCCTGTCCAC +
Preference number: 6 (lower is better)
Translates to: ELPVNEALVNSI*NVILTAGLPVH
Trigger: GTGGACAGGAAGACCGGCAGTCAGTATGACATTCAAGATGCTATTGACAAGGGCCTCGTTGACAGGAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp CATGTCTTGGTCAATGAGACCCTGGTTGACTGCATCTaGAAGGGAGAGCTTCTGACCAGTGGTAGGGTGAAT +
Preference number: 6 (lower is better)
Translates to: HVLVNETLVDCI*KGELLTSGRVN
Trigger: ATTCACCCTACCACTGGTCAGAAGCTCTCCCTTCAAGATGCAGTCAACCAGGGTCTCATTGACCAAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp GCGCTGTTGTTGGCTTTCTGCAGGTCATACTGGACTCTCTGCAACTaGGAATTTTCGTCCTCCAGGCACTTCCTCTCATTGGTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: ALLLAFCRSYWTLCN*EFSSSRHFLSLVSL
Trigger: CAAAGAAACCAATGAGAGGAAGTGCCTGGAGGACGAAAATTCCAAGTTGCAGAGAGTCCAGTATGACCTGCAGAAAGCCAACAACAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 90 bp CTCTGTAAATCATTAATCAGCCCCTGCAGCTCGAGGGTTCGATTGTaGCTGATCTGCAGTTGGCTCCTTAGCTCGGAGATGGTTGAGTTT +
Preference number: 6 (lower is better)
Translates to: LCKSLISPCSSRVRL*LICSWLLSSEMVEF
Trigger: AAACTCAACCATCTCCGAGCTAAGGAGCCAACTGCAGATCAGCAACAATCGAACCCTCGAGCTGCAGGGGCTGATTAATGATTTACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 90 bp CTGTCGATCAAATTCTTCTTGATGGCTTCTGAAACAGAGACCGTCTaGCCCGAAAACGGGTCATCGAAACCAGTGATGGCTTTCTCCGCT +
Preference number: 6 (lower is better)
Translates to: LSIKFFLMASETETV*PENGSSKPVMAFSA
Trigger: AGCGGAGAAAGCCATCACTGGTTTCGATGACCCGTTTTCGGGCAAGACGGTCTCTGTTTCAGAAGCCATCAAGAAGAATTTGATCGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp ACTTTATTGTGGTTGACATCTTGGCAGGTACCCAGGTaGGTGATTTCGGTTTTGGTGACTGTCTGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: TLLWLTSWQVPR*VISVLVTVWCW
Trigger: CCAGCACCAGACAGTCACCAAAACCGAAATCACTCACCTGGGTACCTGCCAAGATGTCAACCACAATAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp CCTCCAGCATCAAGTGTTCCTTGGTCAGGTTCTCCGTaGGCGACTGTAGCCTTTCGATCTCTATTTTACTCT +
Preference number: 6 (lower is better)
Translates to: PPASSVPWSGSP*ATVAFRSLFYS
Trigger: AGAGTAAAATAGAGATCGAAAGGCTACAGTCGCTCACGGAGAACCTGACCAAGGAACACTTGATGCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 72 bp TCTATCTTCCTAATGGTCTCCTCCTTGCGGGAATACTaGGTTTTCCACTGGTTCAGGTCGTTCTGGATCTGC +
Preference number: 6 (lower is better)
Translates to: SIFLMVSSLREY*VFHWFRSFWIC
Trigger: GCAGATCCAGAACGACCTGAACCAGTGGAAAACTCAGTATTCCCGCAAGGAGGAGACCATTAGGAAGATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp GGCGCATTCCGGTTTCTCTGTCGATCAAATTCTTCTTaGTGGCTTCTGAAACAGAGACCGTCTTGCCCGAAA +
Preference number: 6 (lower is better)
Translates to: GAFRFLCRSNSS*WLLKQRPSCPK
Trigger: TTTCGGGCAAGACGGTCTCTGTTTCAGAAGCCATCAAGAAGAATTTGATCGACAGAGAAACCGGAATGCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp GATCATGTCAGCAAACTGTGTGAGGCTAAGGCTGCCTaGTCGGTATTGATCGAAGAACTTCCTGTCAACGAG +
Preference number: 6 (lower is better)
Translates to: DHVSKLCEAKAA*SVLIEELPVNE
Trigger: CTCGTTGACAGGAAGTTCTTCGATCAATACCGATCAGGCAGCCTTAGCCTCACACAGTTTGCTGACATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp CTCTCTCTCCTGAACAACTTGAGTGCACTGACTCTTTaGCTCCTGGATCCTATTAGATGCCTTTGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LSLLNNLSALTL*LLDPIRCLCQL
Trigger: GAGCTGGCAAAGGCATCTAATAGGATCCAGGAGTCAAAGAGTCAGTGCACTCAAGTTGTTCAGGAGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000127906.8
CDS GCA 72 bp TCGTTGATTTTCACGGTGATGTGGTGTGTAGAGCCTTaGTCTGCCAGCAGGAGATTTTTAAGCGTCATCCTG +
Preference number: 6 (lower is better)
Translates to: SLIFTVMWCVEP*SASRRFLSVIL
Trigger: CAGGATGACGCTTAAAAATCTCCTGCTGGCAGAGCAAGGCTCTACACACCACATCACCGTGAAAATCAACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp AAGAGTCCTGGCGGCGTTTGGCATCATATAGCCACTTaGAGAAGCTCTGATAGTTGTCCCGATAATTCCTCA +
Preference number: 6 (lower is better)
Translates to: KSPGGVWHHIAT*RSSDSCPDNSS
Trigger: TGAGGAATTATCGGGACAACTATCAGAGCTTCTGCAAGTGGCTATATGATGCCAAACGCCGCCAGGACTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp GGTGATGCTATCCACAATGCCCCGCTCTATACCTTCTaGGATCGAGATTTTCTCCAGGTTCTCTGTGTCAAA +
Preference number: 6 (lower is better)
Translates to: GDAIHNAPLYTF*DRDFLQVLCVK
Trigger: TTTGACACAGAGAACCTGGAGAAAATCTCGATCGCAGAAGGTATAGAGCGGGGCATTGTGGATAGCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp TCTTTCTCCAGCTCTTTGATCTGCTCCAGCAGGTGCTaGAGAGGCATATTCTTGTCACAGGGGTATTTCTTC +
Preference number: 6 (lower is better)
Translates to: SFSSSLICSSRC*RGIFLSQGYFF
Trigger: GAAGAAATACCCCTGTGACAAGAATATGCCTCTCCAGCACCTGCTGGAGCAGATCAAAGAGCTGGAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp TCTCAGCTGCATGTAGCTGACCTTCTTCTTGGTGATTaGATCCACGAAGTTCTTCTGACTATCTCGGGGATC +
Preference number: 6 (lower is better)
Translates to: SQLHVADLLLGD*IHEVLLTISGI
Trigger: GATCCCCGAGATAGTCAGAAGAACTTCGTGGATCCAATCACCAAGAAGAAGGTCAGCTACATGCAGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp CTCGTTGATTTTCACGGTGATGTGGTGTGTAGAGCCTaGCTCTGCCAGCAGGAGATTTTTAAGCGTCATCCT +
Preference number: 6 (lower is better)
Translates to: LVDFHGDVVCRA*LCQQEIFKRHP
Trigger: AGGATGACGCTTAAAAATCTCCTGCTGGCAGAGCAAGGCTCTACACACCACATCACCGTGAAAATCAACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp TTGGCTTTCTGCAGGTCATACTGGACTCTCTGCAACTaGGAATTTTCGTCCTCCAGGCACTTCCTCTCATTG +
Preference number: 6 (lower is better)
Translates to: LAFCRSYWTLCN*EFSSSRHFLSL
Trigger: CAATGAGAGGAAGTGCCTGGAGGACGAAAATTCCAAGTTGCAGAGAGTCCAGTATGACCTGCAGAAAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 72 bp AGGCGCATTCCGGTTTCTCTGTCGATCAAATTCTTCTaGATGGCTTCTGAAACAGAGACCGTCTTGCCCGAA +
Preference number: 6 (lower is better)
Translates to: RRIPVSLSIKFF*MASETETVLPE
Trigger: TTCGGGCAAGACGGTCTCTGTTTCAGAAGCCATCAAGAAGAATTTGATCGACAGAGAAACCGGAATGCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp TCACTGTGCAGGTTCTTCTGCTCATTCAAAAACCGCATGACTGTGTaGGAATCTCCAAACTTCATGGACTCTAAAGAGTCCTGGCGGCGT +
Preference number: 6 (lower is better)
Translates to: SLCRFFCSFKNRMTV*ESPNFMDSKESWRR
Trigger: ACGCCGCCAGGACTCTTTAGAGTCCATGAAGTTTGGAGATTCCAACACAGTCATGCGGTTTTTGAATGAGCAGAAGAACCTGCACAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp ACTCTCTGCAACTTGGAATTTTCGTCCTCCAGGCACTTCCTCTCATaGGTTTCTTTGTCGACCAGCTGTTTGAGCCTTTCGATCTCCTTG +
Preference number: 6 (lower is better)
Translates to: TLCNLEFSSSRHFLS*VSLSTSCLSLSISL
Trigger: CAAGGAGATCGAAAGGCTCAAACAGCTGGTCGACAAAGAAACCAATGAGAGGAAGTGCCTGGAGGACGAAAATTCCAAGTTGCAGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 90 bp GTCCTTCAGAATACACTCATCCCCTTTGTGTACGATTTTCTGGTCTaGTTTGTAGTCGCAGAGAGCCCTGAGGATAATGGGCTTGTTGCT +
Preference number: 6 (lower is better)
Translates to: VLQNTLIPFVYDFLV*FVVAESPEDNGLVA
Trigger: AGCAACAAGCCCATTATCCTCAGGGCTCTCTGCGACTACAAACAAGACCAGAAAATCGTACACAAAGGGGATGAGTGTATTCTGAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp TTTCTCCAGGTCCCACAATCTGAAGTCTATCTGTTTATCTATCTTTaGCCAGCGGTCCGTCAGCTGGGTCACTTTCTCAGTGAATTTGCC +
Preference number: 6 (lower is better)
Translates to: FLQVPQSEVYLFIYL*PAVRQLGHFLSEFA
Trigger: GGCAAATTCACTGAGAAAGTGACCCAGCTGACGGACCGCTGGCAAAAGATAGATAAACAGATAGACTTCAGATTGTGGGACCTGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp GGTTTCTCTGTCGATCAAATTCTTCTTGATGGCTTCTaGAACAGAGACCGTCTTGCCCGAAAACGGGTCATC +
Preference number: 6 (lower is better)
Translates to: GFSVDQILLDGF*NRDRLARKRVI
Trigger: GATGACCCGTTTTCGGGCAAGACGGTCTCTGTTTCAGAAGCCATCAAGAAGAATTTGATCGACAGAGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp CTTAGTGGTCTCATTATATATGCCTGCTATGCAGCTTaGACCCTGGAGGAAGTCCTTGATTCTCTCCCCAAC +
Preference number: 6 (lower is better)
Translates to: LSGLIIYACYAA*TLEEVLDSLPN
Trigger: GTTGGGGAGAGAATCAAGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGCATATATAATGAGACCACTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp TCCCACAATCTGAAGTCTATCTGTTTATCTATCTTTTaGCAGCGGTCCGTCAGCTGGGTCACTTTCTCAGTG +
Preference number: 6 (lower is better)
Translates to: SHNLKSICLSIF*QRSVSWVTFSV
Trigger: CACTGAGAAAGTGACCCAGCTGACGGACCGCTGGCAAAAGATAGATAAACAGATAGACTTCAGATTGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp TTTTCCCTCTCTCTCTGTAAATCATTAATCAGCCCCTaGAGCTCGAGGGTTCGATTGTTGCTGATCTGCAGT +
Preference number: 6 (lower is better)
Translates to: FSLSLCKSLISP*SSRVRLLLICS
Trigger: ACTGCAGATCAGCAACAATCGAACCCTCGAGCTGCAGGGGCTGATTAATGATTTACAGAGAGAGAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS GCA 72 bp CTCGTAGGGAAGCCATTTCTCTTTGACTGCCTCTGCTaGCGACATCTTCTTCTTTCCTTTTACCCCTTCAAA +
Preference number: 6 (lower is better)
Translates to: LVGKPFLFDCLC*RHLLLSFYPFK
Trigger: TTTGAAGGGGTAAAAGGAAAGAAGAAGATGTCGGCAGCAGAGGCAGTCAAAGAGAAATGGCTTCCCTACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp CAAACTTCATGGACTCTAAAGAGTCCTGGCGGCGTTTaGCATCATATAGCCACTTGCAGAAGCTCTGATAGT +
Preference number: 6 (lower is better)
Translates to: QTSWTLKSPGGV*HHIATCRSSDS
Trigger: ACTATCAGAGCTTCTGCAAGTGGCTATATGATGCCAAACGCCGCCAGGACTCTTTAGAGTCCATGAAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp TTGGAATCTCCAAACTTCATGGACTCTAAAGAGTCCTaGCGGCGTTTGGCATCATATAGCCACTTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: LESPNFMDSKES*RRLASYSHLQK
Trigger: CTTCTGCAAGTGGCTATATGATGCCAAACGCCGCCAGGACTCTTTAGAGTCCATGAAGTTTGGAGATTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp CATAGGAAATCTGACCGGATTCCAGTTCGTTTACAGTaGACGGTCTCAATATGCCAGAATCAACCAGTTCGG +
Preference number: 6 (lower is better)
Translates to: HRKSDRIPVRLQ*TVSICQNQPVR
Trigger: CCGAACTGGTTGATTCTGGCATATTGAGACCGTCCACTGTAAACGAACTGGAATCCGGTCAGATTTCCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp GTCTCATTATATATGCCTGCTATGCAGCTTGAACCCTaGAGGAAGTCCTTGATTCTCTCCCCAACCTCATCA +
Preference number: 6 (lower is better)
Translates to: VSLYMPAMQLEP*RKSLILSPTSS
Trigger: TGATGAGGTTGGGGAGAGAATCAAGGACTTCCTCCAGGGTTCAAGCTGCATAGCAGGCATATATAATGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp GTCCCACAATCTGAAGTCTATCTGTTTATCTATCTTTaGCCAGCGGTCCGTCAGCTGGGTCACTTTCTCAGT +
Preference number: 6 (lower is better)
Translates to: VPQSEVYLFIYL*PAVRQLGHFLS
Trigger: ACTGAGAAAGTGACCCAGCTGACGGACCGCTGGCAAAAGATAGATAAACAGATAGACTTCAGATTGTGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp AACTTGGAATTTTCGTCCTCCAGGCACTTCCTCTCATaGGTTTCTTTGTCGACCAGCTGTTTGAGCCTTTCG +
Preference number: 6 (lower is better)
Translates to: NLEFSSSRHFLS*VSLSTSCLSLS
Trigger: CGAAAGGCTCAAACAGCTGGTCGACAAAGAAACCAATGAGAGGAAGTGCCTGGAGGACGAAAATTCCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 72 bp AAATTCTTCTTGATGGCTTCTGAAACAGAGACCGTCTaGCCCGAAAACGGGTCATCGAAACCAGTGATGGCT +
Preference number: 6 (lower is better)
Translates to: KFFLMASETETV*PENGSSKPVMA
Trigger: AGCCATCACTGGTTTCGATGACCCGTTTTCGGGCAAGACGGTCTCTGTTTCAGAAGCCATCAAGAAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp AACTTGGAATTTTCGTCCTCCAGGCACTTCCTCTCATTGGTTTCTTaGTCGACCAGCTGTTTGAGCCTTTCGATCTCCTTGTTCTTATCC +
Preference number: 6 (lower is better)
Translates to: NLEFSSSRHFLSLVS*STSCLSLSISLFLS
Trigger: GGATAAGAACAAGGAGATCGAAAGGCTCAAACAGCTGGTCGACAAAGAAACCAATGAGAGGAAGTGCCTGGAGGACGAAAATTCCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS CAA 90 bp TTCTCCGTGAGCGACTGTAGCCTTTCGATCTCTATTTTACTCTCATaGAGGCTCCTGCTTTTGTCTTCTATGGCCTTCTGGAAATGCTCA +
Preference number: 6 (lower is better)
Translates to: FSVSDCSLSISILLS*RLLLLSSMAFWKCS
Trigger: TGAGCATTTCCAGAAGGCCATAGAAGACAAAAGCAGGAGCCTCAATGAGAGTAAAATAGAGATCGAAAGGCTACAGTCGCTCACGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 72 bp ACTTCCTCTCATTGGTTTCTTTGTCGACCAGCTGTTTaGGCCTTTCGATCTCCTTGTTCTTATCCTGGATGG +
Preference number: 6 (lower is better)
Translates to: TSSHWFLCRPAV*AFRSPCSYPGW
Trigger: CCATCCAGGATAAGAACAAGGAGATCGAAAGGCTCAAACAGCTGGTCGACAAAGAAACCAATGAGAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 72 bp ACCTTCTTCTTGGTGATTGGATCCACGAAGTTCTTCTaGCTATCTCGGGGATCGTTCAAGGAGCGATACAAA +
Preference number: 6 (lower is better)
Translates to: TFFLVIGSTKFF*LSRGSFKERYK
Trigger: TTTGTATCGCTCCTTGAACGATCCCCGAGATAGTCAGAAGAACTTCGTGGATCCAATCACCAAGAAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp AATACACTCATCCCCTTTGTGTACGATTTTCTGGTCTaGTTTGTAGTCGCAGAGAGCCCTGAGGATAATGGG +
Preference number: 6 (lower is better)
Translates to: NTLIPFVYDFLV*FVVAESPEDNG
Trigger: CCCATTATCCTCAGGGCTCTCTGCGACTACAAACAAGACCAGAAAATCGTACACAAAGGGGATGAGTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp AGCGACTGTAGCCTTTCGATCTCTATTTTACTCTCATaGAGGCTCCTGCTTTTGTCTTCTATGGCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SDCSLSISILLS*RLLLLSSMAFW
Trigger: CCAGAAGGCCATAGAAGACAAAAGCAGGAGCCTCAATGAGAGTAAAATAGAGATCGAAAGGCTACAGTCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124830.3
CDS TCA 72 bp CTCATCTCTCGGATCAAGCCGTCTATGATTTCCATCTaGTCGTTGGCTTGTGTAAAATACTCATCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: LISRIKPSMISI*SLACVKYSSSS
Trigger: AGAGCTGGATGAGTATTTTACACAAGCCAACGATCAGATGGAAATCATAGACGGCTTGATCCGAGAGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp CACTGTGCAGGTTCTTCTGCTCATTCAAAAACCGCATaGCTGTGTTGGAATCTCCAAACTTCATGGACTCTA +
Preference number: 6 (lower is better)
Translates to: HCAGSSAHSKTA*LCWNLQTSWTL
Trigger: TAGAGTCCATGAAGTTTGGAGATTCCAACACAGTCATGCGGTTTTTGAATGAGCAGAAGAACCTGCACAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CCA 72 bp GATCTAGGAACTTATTCTTATTGCAATTTTCCGAGTTaGCATCCCGGGCCAGTCTTAGCTCCTCTTCCAAAA +
Preference number: 6 (lower is better)
Translates to: DLGTYSYCNFPS*HPGPVLAPLPK
Trigger: TTTTGGAAGAGGAGCTAAGACTGGCCCGGGATGCCAACTCGGAAAATTGCAATAAGAATAAGTTCCTAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp TTTAAGCTTATTGAGTTCCTTTTCCTTGACCTCCAGTaGACTCATGCGTATAGAGAAGGCCTCCTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: FKLIEFLFLDLQ*THAYREGLLLL
Trigger: CAGAAGCAGGAGGCCTTCTCTATACGCATGAGTCAACTGGAGGTCAAGGAAAAGGAACTCAATAAGCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp ACGATCTTCTTGGACTTGTTTACCAAGTTCTGCACCTaGCGCTTGTATTCAATGATCTTCTCCCGTTCTTTC +
Preference number: 6 (lower is better)
Translates to: TIFLDLFTKFCT*RLYSMIFSRSF
Trigger: GAAAGAACGGGAGAAGATCATTGAATACAAGCGTCAGGTGCAGAACTTGGTAAACAAGTCCAAGAAGATCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp GGTGTACGATGCCAGCTGCAGTTCATAATCCTTAATTaGGTTTGCGCAAAGTTCAGCGATTTTATGCACTTC +
Preference number: 6 (lower is better)
Translates to: GVRCQLQFIILN*VCAKFSDFMHF
Trigger: GAAGTGCATAAAATCGCTGAACTTTGCGCAAACTCAATTAAGGATTATGAACTGCAGCTGGCATCGTACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp ATTTCTGCAGGTTCTGATCTAGGAACTTATTCTTATTaGAATTTTCCGAGTTGGCATCCCGGGCCAGTCTTA +
Preference number: 6 (lower is better)
Translates to: ISAGSDLGTYSY*NFPSWHPGPVL
Trigger: TAAGACTGGCCCGGGATGCCAACTCGGAAAATTGCAATAAGAATAAGTTCCTAGATCAGAACCTGCAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp AGCTGGATGCTGATTGAGGACAAGCTGGTCACTTTCTaGTTTAAGCTTATTGAGTTCCTTTTCCTTGACCTC +
Preference number: 6 (lower is better)
Translates to: SWMLIEDKLVTF*FKLIEFLFLDL
Trigger: GAGGTCAAGGAAAAGGAACTCAATAAGCTTAAACAAGAAAGTGACCAGCTTGTCCTCAATCAGCATCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp AGGTTCTTCTGCTCATTCAAAAACCGCATGACTGTGTaGGAATCTCCAAACTTCATGGACTCTAAAGAGTCC +
Preference number: 6 (lower is better)
Translates to: RFFCSFKNRMTV*ESPNFMDSKES
Trigger: GGACTCTTTAGAGTCCATGAAGTTTGGAGATTCCAACACAGTCATGCGGTTTTTGAATGAGCAGAAGAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 72 bp GCGCAAAGTTCAGCGATTTTATGCACTTCTTCTGATTaGTCTCGTTTGCCAGATATTTCACTGTGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: AQSSAILCTSSD*SRLPDISLCRF
Trigger: GAACCTGCACAGTGAAATATCTGGCAAACGAGACAAATCAGAAGAAGTGCATAAAATCGCTGAACTTTGCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp GTTTGCGCAAAGTTCAGCGATTTTATGCACTTCTTCTaGTTTGTCTCGTTTGCCAGATATTTCACTGTGCAG +
Preference number: 6 (lower is better)
Translates to: VCAKFSDFMHFF*FVSFARYFTVQ
Trigger: CTGCACAGTGAAATATCTGGCAAACGAGACAAATCAGAAGAAGTGCATAAAATCGCTGAACTTTGCGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp AACTGGGAACACTCTGCCTGGTATTTCTGCAGGTTCTaGTCTAGGAACTTATTCTTATTGCAATTTTCCGAG +
Preference number: 6 (lower is better)
Translates to: NWEHSAWYFCRF*SRNLFLLQFSE
Trigger: CTCGGAAAATTGCAATAAGAATAAGTTCCTAGATCAGAACCTGCAGAAATACCAGGCAGAGTGTTCCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS TCA 72 bp TGGATCGAAAAAGCCTTTGGTATCATCACTTGGGTCTaGGAGGATTTCGCTAAGCTCCTCATTAAAATAACC +
Preference number: 6 (lower is better)
Translates to: WIEKAFGIITWV*EDFAKLLIKIT
Trigger: GGTTATTTTAATGAGGAGCTTAGCGAAATCCTCTCAGACCCAAGTGATGATACCAAAGGCTTTTTCGATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp GCGCAAAGTTCAGCGATTTTATGCACTTCTTCTGATTTGTCTCGTTaGCCAGATATTTCACTGTGCAGGTTCTTCTGCTCATTCAAAAAC +
Preference number: 6 (lower is better)
Translates to: AQSSAILCTSSDLSR*PDISLCRFFCSFKN
Trigger: GTTTTTGAATGAGCAGAAGAACCTGCACAGTGAAATATCTGGCAAACGAGACAAATCAGAAGAAGTGCATAAAATCGCTGAACTTTGCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp ATTGAGTTTGCGCAAAGTTCAGCGATTTTATGCACTTCTTCTGATTaGTCTCGTTTGCCAGATATTTCACTGTGCAGGTTCTTCTGCTCA +
Preference number: 6 (lower is better)
Translates to: IEFAQSSAILCTSSD*SRLPDISLCRFFCS
Trigger: TGAGCAGAAGAACCTGCACAGTGAAATATCTGGCAAACGAGACAAATCAGAAGAAGTGCATAAAATCGCTGAACTTTGCGCAAACTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS CAA 90 bp GCAGAAGCTCTGATAGTTGTCCCGATAATTCCTCAGTTGTTTGATTaGTTTCTCCAGGTCCCACAATCTGAAGTCTATCTGTTTATCTAT +
Preference number: 6 (lower is better)
Translates to: AEALIVVPIIPQLFD*FLQVPQSEVYLFIY
Trigger: ATAGATAAACAGATAGACTTCAGATTGTGGGACCTGGAGAAACAAATCAAACAACTGAGGAATTATCGGGACAACTATCAGAGCTTCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8
CDS GCA 72 bp TCCTTAATTGAGTTTGCGCAAAGTTCAGCGATTTTATaGACTTCTTCTGATTTGTCTCGTTTGCCAGATATT +
Preference number: 6 (lower is better)
Translates to: SLIEFAQSSAIL*TSSDLSRLPDI
Trigger: AATATCTGGCAAACGAGACAAATCAGAAGAAGTGCATAAAATCGCTGAACTTTGCGCAAACTCAATTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124830.3
ENSMUST00000127906.8