Pregenerated sensors for DSG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044393Ensembl transcript IDs: ENSMUST00000059787.15, ENSMUST00000120102.8, ENSMUST00000121837.2
Found 308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGAACCCTTTATATACACCAGATTGGCCTCGAACCCGGAGAGATTTaGCTGCTTCTTGAGTTCTGGACTAAAGGCCTGCACCACCACACC | + |
Preference number: 1 (lower is better) Translates to: GTLYIHQIGLEPGEI*LLLEFWTKGLHHHT Trigger: GGTGTGGTGGTGCAGGCCTTTAGTCCAGAACTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAATCTGGTGTATATAAAGGGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR TCA 90 bp | GAGGATGCAAGAGTGGAACTCGGCTGCTCACTAACCACTCAACTGTaGGTGCAATGTCTTTGGAGTCCATTAGAGAGCATCAGATCCCTT | + |
Preference number: 1 (lower is better) Translates to: EDARVELGCSLTTQL*VQCLWSPLESIRSL Trigger: AAGGGATCTGATGCTCTCTAATGGACTCCAAAGACATTGCACTCACAGTTGAGTGGTTAGTGAGCAGCCGAGTTCCACTCTTGCATCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CCA 90 bp | ACAGTGCTGAATATTAAACTTGGAGCCTTGACCAGAACCTTGTCTTaGCTTCATCCTTCTCTAGCCCCGCCCCCTGTCTCTTTCATTTCC | + |
Preference number: 1 (lower is better) Translates to: TVLNIKLGALTRTLS*LHPSLAPPPVSFIS Trigger: GGAAATGAAAGAGACAGGGGGCGGGGCTAGAGAAGGATGAAGCCAAGACAAGGTTCTGGTCAAGGCTCCAAGTTTAATATTCAGCACTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR CCA 90 bp | TGTACTCAGGGTTCCAGTGGAGATGAAAGAGTGGAGATGTGTCTCTaGGTGGATGAGCTATTTGGTACCTATAACCTGTGTGGCTCTGTA | + |
Preference number: 1 (lower is better) Translates to: CTQGSSGDERVEMCL*VDELFGTYNLCGSV Trigger: TACAGAGCCACACAGGTTATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTCCACTGGAACCCTGAGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CCA 90 bp | TTTCTTCCCTCTGGTGTACTCAGGGTTCCAGTGGAGATGAAAGAGTaGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATAACC | + |
Preference number: 1 (lower is better) Translates to: FLPSGVLRVPVEMKE*RCVSGWMSYLVPIT Trigger: GGTTATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTCCACTGGAACCCTGAGTACACCAGAGGGAAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTCCCTCTaGTGTACTCAGGGTTCCAGTGGAGATGAAAGAGTGGAGATGTGT | + |
Preference number: 1 (lower is better) Translates to: SLSLSLSLSFFLSSL*CTQGSSGDERVEMC Trigger: ACACATCTCCACTCTTTCATCTCCACTGGAACCCTGAGTACACCAGAGGGAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR TCA 90 bp | TTGCCTTCACAGAGGATCCCTTTCAGGAAGCTCAGCTATTCACCATaGCAGTTATCAATTGCTATGAAGAAATGCATTGAGTGCATAGTC | + |
Preference number: 1 (lower is better) Translates to: LPSQRIPFRKLSYSP*QLSIAMKKCIECIV Trigger: GACTATGCACTCAATGCATTTCTTCATAGCAATTGATAACTGTCATGGTGAATAGCTGAGCTTCCTGAAAGGGATCCTCTGTGAAGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR GCA 90 bp | TCTGTTGCTTTTAACTACTGGACCTTGTATCTTAAACAGATTGGTTaGCTTCACAGAGGATCCCTTTCAGGAAGCTCAGCTATTCACCAT | + |
Preference number: 1 (lower is better) Translates to: SVAFNYWTLYLKQIG*LHRGSLSGSSAIHH Trigger: ATGGTGAATAGCTGAGCTTCCTGAAAGGGATCCTCTGTGAAGGCAACCAATCTGTTTAAGATACAAGGTCCAGTAGTTAAAAGCAACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR CCA 90 bp | AGCATTGCTGAAATACAACCCTACCTGAGACATGGTGTCTTTGTTTaGCATGTCAATAAGTTTTTCCAATGTGCAAGTCTTGTGTGGCTG | + |
Preference number: 1 (lower is better) Translates to: SIAEIQPYLRHGVFV*HVNKFFQCASLVWL Trigger: CAGCCACACAAGACTTGCACATTGGAAAAACTTATTGACATGCCAAACAAAGACACCATGTCTCAGGTAGGGTTGTATTTCAGCAATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR TCA 90 bp | CCATCCCCCAATAATCACAGAGCATTGCTGAAATACAACCCTACCTaGGACATGGTGTCTTTGTTTGGCATGTCAATAAGTTTTTCCAAT | + |
Preference number: 1 (lower is better) Translates to: PSPNNHRALLKYNPT*DMVSLFGMSISFSN Trigger: ATTGGAAAAACTTATTGACATGCCAAACAAAGACACCATGTCTCAGGTAGGGTTGTATTTCAGCAATGCTCTGTGATTATTGGGGGATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR GCA 90 bp | CACATGGGATGTATTTATAATTCCACACAGTGGTGTAATTCCTGCTaGACACCTGGTAAAATAACATCAGCTACAAAGAAAATGAAAGCA | + |
Preference number: 1 (lower is better) Translates to: HMGCIYNSTQWCNSC*TPGKITSATKKMKA Trigger: TGCTTTCATTTTCTTTGTAGCTGATGTTATTTTACCAGGTGTGCAGCAGGAATTACACCACTGTGTGGAATTATAAATACATCCCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR GCA 90 bp | CTTGTAGATAGGAAACAGATCTATGAAGACGTTTCCTTCATAGACTaGCATCACATTGCAGAAAAGTTAACTAGGAATTTTATCCTGGAT | + |
Preference number: 1 (lower is better) Translates to: LVDRKQIYEDVSFID*HHIAEKLTRNFILD Trigger: ATCCAGGATAAAATTCCTAGTTAACTTTTCTGCAATGTGATGGCAGTCTATGAAGGAAACGTCTTCATAGATCTGTTTCCTATCTACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR GCA 90 bp | TTGCACATGGGATGTATTTATAATTCCACACAGTGGTGTAATTCCTaGTGCACACCTGGTAAAATAACATCAGCTACAAAGAAAATGAAA | + |
Preference number: 1 (lower is better) Translates to: LHMGCIYNSTQWCNS*CTPGKITSATKKMK Trigger: TTTCATTTTCTTTGTAGCTGATGTTATTTTACCAGGTGTGCAGCAGGAATTACACCACTGTGTGGAATTATAAATACATCCCATGTGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR GCA 90 bp | CAATTTGGTATTTCTAGAAAATATGCACATCAAGTTGTAAAGACTTaGTCTCAGCGTCCTCAGTCTCTTCGTGTACCATATAATAGTGTT | + |
Preference number: 1 (lower is better) Translates to: QFGISRKYAHQVVKT*SQRPQSLRVPYNSV Trigger: AACACTATTATATGGTACACGAAGAGACTGAGGACGCTGAGAGCAAGTCTTTACAACTTGATGTGCATATTTTCTAGAAATACCAAATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR GCA 90 bp | TTGGGCCAGTTACTCAAGGGTTTTTATGATAAAGTATTTACTTCATaGATATCAACTCATGACCAGCCAATTATGTCAGATATCAAGATG | + |
Preference number: 1 (lower is better) Translates to: LGQLLKGFYDKVFTS*ISTHDQPIMSDIKM Trigger: CATCTTGATATCTGACATAATTGGCTGGTCATGAGTTGATATGCATGAAGTAAATACTTTATCATAAAAACCCTTGAGTAACTGGCCCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CAA 90 bp | ATATACACCAGATTGGCCTCGAACCCGGAGAGATTTGCCTGCTTCTaGAGTTCTGGACTAAAGGCCTGCACCACCACACCTGGCTATCAT | + |
Preference number: 2 (lower is better) Translates to: IYTRLASNPERFACF*SSGLKACTTTPGYH Trigger: ATGATAGCCAGGTGTGGTGGTGCAGGCCTTTAGTCCAGAACTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAATCTGGTGTATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR-3UTR GCA 90 bp | CCCTCTGGTGTACTCAGGGTTCCAGTGGAGATGAAAGAGTGGAGATGTGTCTCTCCTGCTGAATATCAATaGATTGTGCAGAGACCCAGC | + |
Preference number: 2 (lower is better) Translates to: PSGVLRVPVEMKEWRCVSPAEYQ*IVQRPS Trigger: GCTGGGTCTCTGCACAATGCATTGATATTCAGCAGG...AGAGACACATCTCCACTCTTTCATCTCCACTGGAACCCTGAGTACACCAGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR-3UTR GCA 90 bp | CAGGGATGGTTTGAGTCCTGGTTTTCCACTTCCCCAGGGCTTACAACCTTGATTCACTGCTTGGAAGTGTaGTATGCAAGGTTGTGTGCC | + |
Preference number: 2 (lower is better) Translates to: QGWFESWFSTSPGLTTLIHCLEV*YARLCA Trigger: GGCACACAACCTTGCATAGCACACTTCCAAGCAGTG...AATCAAGGTTGTAAGCCCTGGGGAAGTGGAAAACCAGGACTCAAACCATCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR-3UTR TCA 90 bp | GAGACAGGGTTTTTCTATGTAGCCCTGGGTGTCCTGGAACCCTTTATATACACCGGGTTCCAGTGGAGATaGAAGAGTGGAGATGTGTCT | + |
Preference number: 2 (lower is better) Translates to: ETGFFYVALGVLEPFIYTGFQWR*KSGDVS Trigger: AGACACATCTCCACTCTTTCATCTCCACTGGAACCC...GGTGTATATAAAGGGTTCCAGGACACCCAGGGCTACATAGAAAAACCCTGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CAA 90 bp | ATAAACACAGTGCTGAATATTAAACTTGGAGCCTTGACCAGAACCTaGTCTTGGCTTCATCCTTCTCTAGCCCCGCCCCCTGTCTCTTTC | + |
Preference number: 2 (lower is better) Translates to: INTVLNIKLGALTRT*SWLHPSLAPPPVSF Trigger: GAAAGAGACAGGGGGCGGGGCTAGAGAAGGATGAAGCCAAGACAAGGTTCTGGTCAAGGCTCCAAGTTTAATATTCAGCACTGTGTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR CAA 90 bp | GGCTTTCCCTATATAAACACAGTGCTGAATATTAAACTTGGAGCCTaGACCAGAACCTTGTCTTGGCTTCATCCTTCTCTAGCCCCGCCC | + |
Preference number: 2 (lower is better) Translates to: GFPYINTVLNIKLGA*TRTLSWLHPSLAPP Trigger: GGGCGGGGCTAGAGAAGGATGAAGCCAAGACAAGGTTCTGGTCAAGGCTCCAAGTTTAATATTCAGCACTGTGTTTATATAGGGAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR-3UTR CCA 90 bp | GAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAGTGGAGCCTCAAAGCCACCATAACATTAGGGGCATaGACACACACATCCAGTGGA | + |
Preference number: 2 (lower is better) Translates to: ETRKMVLCTKEQWSLKATITLGA*THTSSG Trigger: TCCACTGGATGTGTGTGTCCATGCCCCTAATGTTAT...GGTGGCTTTGAGGCTCCACTGCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR-3UTR CCA 90 bp | GAGACAGGGTTTTTCTATGTAGCCCTGGGTGTCCTGGAACCCTTTATATACACCTTTCTTTCTTCCCTCTaGTGTACTCAGGGTTCCAGT | + |
Preference number: 2 (lower is better) Translates to: ETGFFYVALGVLEPFIYTFLSSL*CTQGSS Trigger: ACTGGAACCCTGAGTACACCAGAGGGAAGAAAGAAA...GGTGTATATAAAGGGTTCCAGGACACCCAGGGCTACATAGAAAAACCCTGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR-3UTR TCA 90 bp | CAAGGAACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGAATGGCTGGGGTTCTGTaGGAGGCACTGAGGATGGAA | + |
Preference number: 2 (lower is better) Translates to: QGTNVKTNANHPLGKQGRMAGVL*EALRME Trigger: TTCCATCCTCAGTGCCTCTCACAGAACCCCAGCCAT...TCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGTTCCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR-3UTR GCA 90 bp | GAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAGTGGAGCCTCAAAGCCACCACAGGACATGGTATGTaGAGAGAAATACACACTATG | + |
Preference number: 2 (lower is better) Translates to: ETRKMVLCTKEQWSLKATTGHGM*REIHTM Trigger: CATAGTGTGTATTTCTCTGCACATACCATGTCCTGT...GGTGGCTTTGAGGCTCCACTGCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR-3UTR CCA 90 bp | GAGACAGGGTTTTTCTATGTAGCCCTGGGTGTCCTGGAACCCTTTATATACACCTCAGCTCACAGGACATaGTATGTGCAGAGAAATACA | + |
Preference number: 2 (lower is better) Translates to: ETGFFYVALGVLEPFIYTSAHRT*YVQRNT Trigger: TGTATTTCTCTGCACATACCATGTCCTGTGAGCTGA...GGTGTATATAAAGGGTTCCAGGACACCCAGGGCTACATAGAAAAACCCTGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR-3UTR TCA 90 bp | GTCCTTGGACTTTCAACAATCCTCCTTTCAAGTGCTGGGATTATATGTACAAGTCCTGTAAAGCACCTGTaGGAGTATGGGACTCAAAGC | + |
Preference number: 2 (lower is better) Translates to: VLGLSTILLSSAGIICTSPVKHL*EYGTQS Trigger: GCTTTGAGTCCCATACTCTCACAGGTGCTTTACAGG...ACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTCCAAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR-3UTR TCA 90 bp | CTGCTCACTAACCACTCAACTGTGAGTGCAATGTCTTTGGAGTCCATTAGAGAGAAATACAACCCTACCTaGGACATGGTGTCTTTGTTT | + |
Preference number: 2 (lower is better) Translates to: LLTNHSTVSAMSLESIREKYNPT*DMVSLF Trigger: AAACAAAGACACCATGTCTCAGGTAGGGTTGTATTT...CTCTCTAATGGACTCCAAAGACATTGCACTCACAGTTGAGTGGTTAGTGAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR-3UTR GCA 90 bp | ACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACGAACCCGGAGAGATTTaGCTGCTTCTTGAGTTCTGG | + |
Preference number: 2 (lower is better) Translates to: TNVKTNANHPLGKQGRWYEPGEI*LLLEFW Trigger: CCAGAACTCAAGAAGCAGGCAAATCTCTCCGGGTTC...GTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR-3UTR CCA 90 bp | GTCCTTGGACTTTCAACAATCCTCCTTTCAAGTGCTGGGATTATATGTACAAGTCAAGCTCACACTGCTTaGAAGTGTGCTATGCAAGGT | + |
Preference number: 2 (lower is better) Translates to: VLGLSTILLSSAGIICTSQAHTA*KCAMQG Trigger: ACCTTGCATAGCACACTTCCAAGCAGTGTGAGCTTG...ACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTCCAAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR-3UTR TCA 90 bp | TTTAAGAGCTCATACTGGATTGCCTGGACCCCTGGAAAATGGTATAGCAGTTTTACGCACAGCCCTCCATaGAGAATGTTACTTTTACAT | + |
Preference number: 2 (lower is better) Translates to: FKSSYWIAWTPGKWYSSFTHSPP*RMLLLH Trigger: ATGTAAAAGTAACATTCTTCATGGAGGGCTGTGCGT...AAAACTGCTATACCATTTTCCAGGGGTCCAGGCAATCCAGTATGAGCTCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR-3UTR GCA 90 bp | GACTTTCAACAATCCTCCTTTCAAGTGCTGGGATTATATGTACAAGTCACTATACTATGCAAGGTTGTGTaGCTGGGATCTGAGTTCCTG | + |
Preference number: 2 (lower is better) Translates to: DFQQSSFQVLGLYVQVTILCKVV*LGSEFL Trigger: CAGGAACTCAGATCCCAGGCACACAACCTTGCATAG...TATAGTGACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR-3UTR CCA 90 bp | GGAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATCATGGTGTCTTTGTTTaGCATGTCAATAAGTTTTTC | + |
Preference number: 2 (lower is better) Translates to: GDERVEMCLWVDELFGTYHGVFV*HVNKFF Trigger: GAAAAACTTATTGACATGCCAAACAAAGACACCATG...ATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR-3UTR CCA 90 bp | CAAGGAACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGAAGATGTGTCTCTGGGTaGATGAGCTATTTGGTACCT | + |
Preference number: 2 (lower is better) Translates to: QGTNVKTNANHPLGKQGRRCVSG*MSYLVP Trigger: AGGTACCAAATAGCTCATCCACCCAGAGACACATCT...TCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGTTCCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CAA 90 bp | TATAATCTGTTGCTTTTAACTACTGGACCTTGTATCTTAAACAGATaGGTTGCCTTCACAGAGGATCCCTTTCAGGAAGCTCAGCTATTC | + |
Preference number: 2 (lower is better) Translates to: YNLLLLTTGPCILNR*VAFTEDPFQEAQLF Trigger: GAATAGCTGAGCTTCCTGAAAGGGATCCTCTGTGAAGGCAACCAATCTGTTTAAGATACAAGGTCCAGTAGTTAAAAGCAACAGATTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR-3UTR CCA 90 bp | TCTCAGCGTCCTCAGTCTCTTCGTGTACCATATAATAGTGTTAATCTTCGAGGAGTACCTAACCAATTATaGCAAATGGATGTTACCCAT | + |
Preference number: 2 (lower is better) Translates to: SQRPQSLRVPYNSVNLRGVPNQL*QMDVTH Trigger: ATGGGTAACATCCATTTGCCATAATTGGTTAGGTAC...TCCTCGAAGATTAACACTATTATATGGTACACGAAGAGACTGAGGACGCTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR-3UTR GCA 90 bp | CAAGGAACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGACATAAAATCACTTCATaGATCACAGGGTGCACAGTA | + |
Preference number: 2 (lower is better) Translates to: QGTNVKTNANHPLGKQGRHKITS*ITGCTV Trigger: TACTGTGCACCCTGTGATGCATGAAGTGATTTTATG...TCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGTTCCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR TCA 72 bp | AAGTCGGTCAATGGCAAGAGGGGGATATGGCGGCTGTaGGAGGCACTGAGGATGCAAGAGTGGAACTCGGCT | + |
Preference number: 3 (lower is better) Translates to: KSVNGKRGIWRL*EALRMQEWNSA Trigger: AGCCGAGTTCCACTCTTGCATCCTCAGTGCCTCTCACAGCCGCCATATCCCCCTCTTGCCATTGACCGACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR GCA 72 bp | AGCCCTGGCCCATCAAGCTCACACTGCTTGGAAGTGTaGTATGCAAGGTTGTGTGCCTGGGATCTGAGTTCC | + |
Preference number: 3 (lower is better) Translates to: SPGPSSSHCLEV*YARLCAWDLSS Trigger: GGAACTCAGATCCCAGGCACACAACCTTGCATAGCACACTTCCAAGCAGTGTGAGCTTGATGGGCCAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR CCA 72 bp | CTCGAACCCGGAGAGATTTGCCTGCTTCTTGAGTTCTaGACTAAAGGCCTGCACCACCACACCTGGCTATCA | + |
Preference number: 3 (lower is better) Translates to: LEPGEICLLLEF*TKGLHHHTWLS Trigger: TGATAGCCAGGTGTGGTGGTGCAGGCCTTTAGTCCAGAACTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR GCA 72 bp | TGGCCCATCAAGCTCACACTGCTTGGAAGTGTGCTATaGAAGGTTGTGTGCCTGGGATCTGAGTTCCTGATC | + |
Preference number: 3 (lower is better) Translates to: WPIKLTLLGSVL*KVVCLGSEFLI Trigger: GATCAGGAACTCAGATCCCAGGCACACAACCTTGCATAGCACACTTCCAAGCAGTGTGAGCTTGATGGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR GCA 72 bp | AATATAAGGGGTGGAACTGTCCCTGCTGAATATCAATaGATTGTGCAGAGACCCAGCCTCCTGGACCTGATG | + |
Preference number: 3 (lower is better) Translates to: NIRGGTVPAEYQ*IVQRPSLLDLM Trigger: CATCAGGTCCAGGAGGCTGGGTCTCTGCACAATGCATTGATATTCAGCAGGGACAGTTCCACCCCTTATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR GCA 72 bp | TATATACACCAGATTGGCCTCGAACCCGGAGAGATTTaGCTGCTTCTTGAGTTCTGGACTAAAGGCCTGCAC | + |
Preference number: 3 (lower is better) Translates to: YIHQIGLEPGEI*LLLEFWTKGLH Trigger: GTGCAGGCCTTTAGTCCAGAACTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAATCTGGTGTATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CCA 72 bp | GGTTTGTGGAACTTATCTTGTGCCATAGATAATGGCTaGGGTTCTGTGAGAGGCACTGAGGATGGAAGTCGG | + |
Preference number: 3 (lower is better) Translates to: GLWNLSCAIDNG*GSVRGTEDGSR Trigger: CCGACTTCCATCCTCAGTGCCTCTCACAGAACCCCAGCCATTATCTATGGCACAAGATAAGTTCCACAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CCA 72 bp | TGTGCTATGAAGGCTGTTCCTGATTCTGAGCAATGCTaGTACCAACTGATGTCCGTCCCTGTAAAGCACCTG | + |
Preference number: 3 (lower is better) Translates to: CAMKAVPDSEQC*YQLMSVPVKHL Trigger: CAGGTGCTTTACAGGGACGGACATCAGTTGGTACCAGCATTGCTCAGAATCAGGAACAGCCTTCATAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR TCA 72 bp | TCTCTTTTCTCGGCCTTGAGCAGGGTGAGCAGACCTTaGGCGTTTGCCACATTGAACCTTAATGACTTAGGT | + |
Preference number: 3 (lower is better) Translates to: SLFSALSRVSRP*AFATLNLNDLG Trigger: ACCTAAGTCATTAAGGTTCAATGTGGCAAACGCTCAAGGTCTGCTCACCCTGCTCAAGGCCGAGAAAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR-3UTR CAA 90 bp | GAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAGTGGAGCCTCAAAGCCACCATCAAGGCAAGGAAGTaGAATGAAATTGGGCCAGTT | + |
Preference number: 3 (lower is better) Translates to: ETRKMVLCTKEQWSLKATIKARK*NEIGPV Trigger: AACTGGCCCAATTTCATTCAACTTCCTTGCCTTGAT...GGTGGCTTTGAGGCTCCACTGCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR-3UTR CAA 90 bp | CAACATAAACCAGCTGAAACAAAGGATGGGTCTGTGGGCTTTCCCTATATAAACATTTGGCACTGGGGGTaGAACCCAGGACCTTACACA | + |
Preference number: 3 (lower is better) Translates to: QHKPAETKDGSVGFPYINIWHWG*NPGPYT Trigger: TGTGTAAGGTCCTGGGTTCAACCCCCAGTGCCAAAT...GTTTATATAGGGAAAGCCCACAGACCCATCCTTTGTTTCAGCTGGTTTATGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
||
3UTR-3UTR CAA 90 bp | TCTCAGCGTCCTCAGTCTCTTCGTGTACCATATAATAGTGTTAATCTTCGAGGACAGGGTGAGCAGACCTaGAGCGTTTGCCACATTGAA | + |
Preference number: 3 (lower is better) Translates to: SQRPQSLRVPYNSVNLRGQGEQT*SVCHIE Trigger: TTCAATGTGGCAAACGCTCAAGGTCTGCTCACCCTG...TCCTCGAAGATTAACACTATTATATGGTACACGAAGAGACTGAGGACGCTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
||
3UTR TCA 72 bp | ATCCAGCCAAATTTTAACTTATTTGGCACTGGGGGTTaGACCCAGGACCTTACACATGCTAGGCAAGCCATC | + |
Preference number: 3 (lower is better) Translates to: IQPNFNLFGTGG*TQDLTHARQAI Trigger: GATGGCTTGCCTAGCATGTGTAAGGTCCTGGGTTCAACCCCCAGTGCCAAATAAGTTAAAATTTGGCTGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR CCA 72 bp | GGTTCCAGTGGAGATGAAAGAGTGGAGATGTGTCTCTaGGTGGATGAGCTATTTGGTACCTATAACCTGTGT | + |
Preference number: 3 (lower is better) Translates to: GSSGDERVEMCL*VDELFGTYNLC Trigger: ACACAGGTTATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTCCACTGGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CCA 72 bp | ACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGATaGTACTCTGCACAAAAGAGCAGTGGAGCCTCAAAG | + |
Preference number: 3 (lower is better) Translates to: TNANHPLGKQGR*YSAQKSSGASK Trigger: CTTTGAGGCTCCACTGCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CCA 72 bp | CTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTCCCTCTaGTGTACTCAGGGTTCCAGTGGAGATGAAAGAGTG | + |
Preference number: 3 (lower is better) Translates to: LSLSLSFFLSSL*CTQGSSGDERV Trigger: CACTCTTTCATCTCCACTGGAACCCTGAGTACACCAGAGGGAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CCA 72 bp | AATAGATTTTTCTCTGAAAGGCAAGTAACTGAGCCCTaGCCCATCAAGCTCACACTGCTTGGAAGTGTGCTA | + |
Preference number: 3 (lower is better) Translates to: NRFFSERQVTEP*PIKLTLLGSVL Trigger: TAGCACACTTCCAAGCAGTGTGAGCTTGATGGGCCAGGGCTCAGTTACTTGCCTTTCAGAGAAAAATCTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR CCA 72 bp | CTTTCAGGTAAACCCAGTTCATCCATGGCCATTGATTaGCTAGAGGTCTCACTTTATAACCCAGGCTTACAA | + |
Preference number: 3 (lower is better) Translates to: LSGKPSSSMAID*LEVSLYNPGLQ Trigger: TTGTAAGCCTGGGTTATAAAGTGAGACCTCTAGCCAATCAATGGCCATGGATGAACTGGGTTTACCTGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR-3UTR CAA 90 bp | ACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACCTGAATATCAATGCATaGTGCAGAGACCCAGCCTCC | + |
Preference number: 3 (lower is better) Translates to: TNVKTNANHPLGKQGRWYLNINA*CRDPAS Trigger: GGAGGCTGGGTCTCTGCACAATGCATTGATATTCAG...GTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR GCA 72 bp | GGTTGTCCTTGGACTTTCAACAATCCTCCTTTCAAGTaGTGGGATTATATGTACAAGTCACTATATCCAGCC | + |
Preference number: 3 (lower is better) Translates to: GCPWTFNNPPFK*WDYMYKSLYPA Trigger: GGCTGGATATAGTGACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTCCAAGGACAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR-3UTR CAA 90 bp | GAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATATCCAATGTGCAAGTCTaGTGTGGCTGTTATAACATT | + |
Preference number: 3 (lower is better) Translates to: EMKEWRCVSGWMSYLVPISNVQV*CGCYNI Trigger: AATGTTATAACAGCCACACAAGACTTGCACATTGGA...TATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR-3UTR CAA 90 bp | AATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAATAATCACAGAGCATaGCTGAAATACAACCCTACC | + |
Preference number: 3 (lower is better) Translates to: NANHPLGKQGRWYSAQKSNNHRA*LKYNPT Trigger: GGTAGGGTTGTATTTCAGCAATGCTCTGTGATTATT...GCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR-3UTR CAA 90 bp | GACTTTCAACAATCCTCCTTTCAAGTGCTGGGATTATATGTACAAGTCACTATATCAAGCTCACACTGCTaGGAAGTGTGCTATGCAAGG | + |
Preference number: 3 (lower is better) Translates to: DFQQSSFQVLGLYVQVTISSSHC*EVCYAR Trigger: CCTTGCATAGCACACTTCCAAGCAGTGTGAGCTTGA...TATAGTGACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR TCA 72 bp | ACCATGACAGTTATCAATTGCTATGAAGAAATGCATTaGGTGCATAGTCACATGTCCTTCATGGCTTTGGTC | + |
Preference number: 3 (lower is better) Translates to: TMTVINCYEEMH*VHSHMSFMALV Trigger: GACCAAAGCCATGAAGGACATGTGACTATGCACTCAATGCATTTCTTCATAGCAATTGATAACTGTCATGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
||
3UTR GCA 72 bp | TTGGAACTCAATTTTACATGTCCTGTTTGCGAGTATTaGTTGCACAGTACTCTAAAAGGCACTGAGGAACTA | + |
Preference number: 3 (lower is better) Translates to: LELNFTCPVCEY*LHSTLKGTEEL Trigger: TAGTTCCTCAGTGCCTTTTAGAGTACTGTGCAAGCAATACTCGCAAACAGGACATGTAAAATTGAGTTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR GCA 72 bp | AATGACTTAGGTGGAGTCATCTGCCTTTGTTGCATGTaGACTTTCCTACAGGAACTTAGAATTATAAACTCC | + |
Preference number: 3 (lower is better) Translates to: NDLGGVICLCCM*TFLQELRIINS Trigger: GGAGTTTATAATTCTAAGTTCCTGTAGGAAAGTGCACATGCAACAAAGGCAGATGACTCCACCTAAGTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
||
3UTR CCA 72 bp | TGTCCTTGGACTTTCAACAATCCTCCTTTCAAGTGCTaGGATTATATGTACAAGTCACTATATCCAGCCAAA | + |
Preference number: 3 (lower is better) Translates to: CPWTFNNPPFKC*DYMYKSLYPAK Trigger: TTTGGCTGGATATAGTGACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTCCAAGGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR-3UTR CAA 90 bp | GACTTTCAACAATCCTCCTTTCAAGTGCTGGGATTATATGTACAAGTCACTATACAAATTTTAACTTATTaGGCACTGGGGGTTGAACCC | + |
Preference number: 3 (lower is better) Translates to: DFQQSSFQVLGLYVQVTIQILTY*ALGVEP Trigger: GGGTTCAACCCCCAGTGCCAAATAAGTTAAAATTTG...TATAGTGACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR TCA 72 bp | AATAATCACAGAGCATTGCTGAAATACAACCCTACCTaGGACATGGTGTCTTTGTTTGGCATGTCAATAAGT | + |
Preference number: 3 (lower is better) Translates to: NNHRALLKYNPT*DMVSLFGMSIS Trigger: ACTTATTGACATGCCAAACAAAGACACCATGTCTCAGGTAGGGTTGTATTTCAGCAATGCTCTGTGATTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR GCA 72 bp | TGTAAGTTCTTGGAACTCAATTTTACATGTCCTGTTTaGGAGTATTGCTTGCACAGTACTCTAAAAGGCACT | + |
Preference number: 3 (lower is better) Translates to: CKFLELNFTCPV*EYCLHSTLKGT Trigger: AGTGCCTTTTAGAGTACTGTGCAAGCAATACTCGCAAACAGGACATGTAAAATTGAGTTCCAAGAACTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR GCA 72 bp | ATTTCTAGAAAATATGCACATCAAGTTGTAAAGACTTaGTCTCAGCGTCCTCAGTCTCTTCGTGTACCATAT | + |
Preference number: 3 (lower is better) Translates to: ISRKYAHQVVKT*SQRPQSLRVPY Trigger: ATATGGTACACGAAGAGACTGAGGACGCTGAGAGCAAGTCTTTACAACTTGATGTGCATATTTTCTAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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3UTR-3UTR CAA 90 bp | ACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACAATCCAAACAACTTCTaGAAAGAATCAAGGCAAGGA | + |
Preference number: 3 (lower is better) Translates to: TNVKTNANHPLGKQGRWYNPNNF*KESRQG Trigger: TCCTTGCCTTGATTCTTTCAAGAAGTTGTTTGGATT...GTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR GCA 72 bp | AGGAAACAGATCTATGAAGACGTTTCCTTCATAGACTaGCATCACATTGCAGAAAAGTTAACTAGGAATTTT | + |
Preference number: 3 (lower is better) Translates to: RKQIYEDVSFID*HHIAEKLTRNF Trigger: AAAATTCCTAGTTAACTTTTCTGCAATGTGATGGCAGTCTATGAAGGAAACGTCTTCATAGATCTGTTTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR GCA 72 bp | TGTATTTATAATTCCACACAGTGGTGTAATTCCTGCTaGACACCTGGTAAAATAACATCAGCTACAAAGAAA | + |
Preference number: 3 (lower is better) Translates to: CIYNSTQWCNSC*TPGKITSATKK Trigger: TTTCTTTGTAGCTGATGTTATTTTACCAGGTGTGCAGCAGGAATTACACCACTGTGTGGAATTATAAATACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | CCCTCTGGTGTACTCAGGGTTCCAGTGGAGATGAAAGAGTGGAGATGTGTCTCTAGTGGGCTGCACGCCTaGGCTGGGAGCAAGGATGCT | + |
Preference number: 4 (lower is better) Translates to: PSGVLRVPVEMKEWRCVSSGLHA*AGSKDA Trigger: AGCATCCTTGCTCCCAGCTCAGGCGTGCAGCCCACT...AGAGACACATCTCCACTCTTTCATCTCCACTGGAACCCTGAGTACACCAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | TTGGCCTCGAACCCGGAGAGATTTGCCTGCTTCTTGAGTTCTGGACTAAAGGCCTCTGTGTGCACTTCGTaGAGAGGTTTGGGGGCGGGG | + |
Preference number: 4 (lower is better) Translates to: LASNPERFACFLSSGLKASVCTS*RGLGAG Trigger: CCCCGCCCCCAAACCTCTGCACGAAGTGCACACAGA...GGCCTTTAGTCCAGAACTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | GAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAGTGGAGCCTCAAAGCCACCTGGGCATTGCCAGAGTaGGCTGCACGCCTGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: ETRKMVLCTKEQWSLKATWALPE*AARLSW Trigger: CCAGCTCAGGCGTGCAGCCCACTCTGGCAATGCCCA...GGTGGCTTTGAGGCTCCACTGCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | GAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAGTGGAGCCTCAAAGCCACCGAGTGGCCCCAGCGGTaGGGAGGCTTCTGTGTTCTT | + |
Preference number: 4 (lower is better) Translates to: ETRKMVLCTKEQWSLKATEWPQR*GGFCVL Trigger: AAGAACACAGAAGCCTCCTCACCGCTGGGGCCACTC...GGTGGCTTTGAGGCTCCACTGCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | CTTTATATACACCAGATTGGCCTCGAACCCGGAGAGATTTGCCTGCTTCTTGAGGGCTCTGTGGCTGTCTaGGAGCCAGGAGCACAGTGC | + |
Preference number: 4 (lower is better) Translates to: LYIHQIGLEPGEICLLLEGSVAV*EPGAQC Trigger: GCACTGTGCTCCTGGCTCCCAGACAGCCACAGAGCC...CTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAATCTGGTGTATATAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CAA 72 bp | GCCCTGGGTGTCCTGGAACCCTTTATATACACCAGATaGGCCTCGAACCCGGAGAGATTTGCCTGCTTCTTG | + |
Preference number: 4 (lower is better) Translates to: ALGVLEPFIYTR*ASNPERFACFL Trigger: CAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAATCTGGTGTATATAAAGGGTTCCAGGACACCCAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | AATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACTCTGCACAAAAGAGCTCCCAGGAATGGGGGTaGAGCCTTTGGCGCCCCCTC | + |
Preference number: 4 (lower is better) Translates to: NANHPLGKQGRWYSAQKSSQEWG*SLWRPL Trigger: GAGGGGGCGCCAAAGGCTTCACCCCCATTCCTGGGA...GCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | TTGGCCTCGAACCCGGAGAGATTTGCCTGCTTCTTGAGTTCTGGACTAAAGGCCTGTGCATCTTTCAGATaGTGGGTGACCTCAAGGGGC | + |
Preference number: 4 (lower is better) Translates to: LASNPERFACFLSSGLKACASFR*WVTSRG Trigger: GCCCCTTGAGGTCACCCAGCATCTGAAAGATGCACA...GGCCTTTAGTCCAGAACTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | CTGGGGGTTGAACCCAGGACCTTACACATGCTAGGCAAGCCATCTACCACTGAGCCAGGTTGTTTCCTCTaGAGTCCAATGCATAGCCTG | + |
Preference number: 4 (lower is better) Translates to: LGVEPRTLHMLGKPSTTEPGCFL*SPMHSL Trigger: CAGGCTATGCATTGGACTCCAGAGGAAACAACCTGG...CTCAGTGGTAGATGGCTTGCCTAGCATGTGTAAGGTCCTGGGTTCAACCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR CCA 90 bp | AATCACCCTTTGGGGAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAGTGGACTTCGTGCAGAGGTTTaGGGGCGGGGAAGCCGGTGT | + |
Preference number: 4 (lower is better) Translates to: NHPLGKQGRWYSAQKSSGLRAEV*GRGSRC Trigger: ACACCGGCTTCCCCGCCCCCAAACCTCTGCACGAAG...TCCACTGCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | TTGGCCTCGAACCCGGAGAGATTTGCCTGCTTCTTGAGTTCTGGACTAAAGGCCCACCAAGGTGGAGGTTaGAGCATACACCCTCTCTGT | + |
Preference number: 4 (lower is better) Translates to: LASNPERFACFLSSGLKAHQGGG*SIHPLC Trigger: ACAGAGAGGGTGTATGCTCCAACCTCCACCTTGGTG...GGCCTTTAGTCCAGAACTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | CCCTCTGGTGTACTCAGGGTTCCAGTGGAGATGAAAGAGTGGAGATGTGTCTCTGGCGGTACTACCTTCTaGCTCTGCCTGGAAGATACA | + |
Preference number: 4 (lower is better) Translates to: PSGVLRVPVEMKEWRCVSGGTTF*LCLEDT Trigger: TGTATCTTCCAGGCAGAGTCAGAAGGTAGTACCGCC...AGAGACACATCTCCACTCTTTCATCTCCACTGGAACCCTGAGTACACCAGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | AATCACCCTTTGGGGAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAGTGGAATTGCCAGAGTGGGCTaGACGCCTGAGCTGGGAGCA | + |
Preference number: 4 (lower is better) Translates to: NHPLGKQGRWYSAQKSSGIARVG*TPELGA Trigger: TGCTCCCAGCTCAGGCGTGCAGCCCACTCTGGCAAT...TCCACTGCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | CTGCTCACTAACCACTCAACTGTGAGTGCAATGTCTTTGGAGTCCATTAGAGAGCCAGGAGCACAGTGCTaGGTGGCACTGCTGAGCCTT | + |
Preference number: 4 (lower is better) Translates to: LLTNHSTVSAMSLESIREPGAQC*VALLSL Trigger: AAGGCTCAGCAGTGCCACCCAGCACTGTGCTCCTGG...CTCTCTAATGGACTCCAAAGACATTGCACTCACAGTTGAGTGGTTAGTGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | GAGCCCTGGCCCATCAAGCTCACACTGCTTGGAAGTGTGCTATGCAAGGTTGTGGTCCCACCCTGGTGGTaGACATTTACAACTTACCTT | + |
Preference number: 4 (lower is better) Translates to: EPWPIKLTLLGSVLCKVVVPPWW*TFTTYL Trigger: AAGGTAAGTTGTAAATGTCCACCACCAGGGTGGGAC...CACAACCTTGCATAGCACACTTCCAAGCAGTGTGAGCTTGATGGGCCAGGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR CCA 90 bp | TTGGCCTCGAACCCGGAGAGATTTGCCTGCTTCTTGAGTTCTGGACTAAAGGCCCTCCTGTGTGAACACTaGCTCGTTGTCATTGATGTC | + |
Preference number: 4 (lower is better) Translates to: LASNPERFACFLSSGLKALLCEH*LVVIDV Trigger: GACATCAATGACAACGAGCCAGTGTTCACACAGGAG...GGCCTTTAGTCCAGAACTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | AGTGGTTTGTGGAACTTATCTTGTGCCATAGATAATGGCTGGGGTTCTGTGAGAGGCCACCAGAAGCGATaGCACCACCTTGTCCTCAGG | + |
Preference number: 4 (lower is better) Translates to: SGLWNLSCAIDNGWGSVRGHQKR*HHLVLR Trigger: CCTGAGGACAAGGTGGTGCCATCGCTTCTGGTGGCC...TCTCACAGAACCCCAGCCATTATCTATGGCACAAGATAAGTTCCACAAACCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | GAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATAGCTGCACGCCTGAGCTaGGAGCAAGGATGCTCTCTC | + |
Preference number: 4 (lower is better) Translates to: EMKEWRCVSGWMSYLVPIAARLS*EQGCSL Trigger: GAGAGAGCATCCTTGCTCCCAGCTCAGGCGTGCAGC...TATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | TTGGCCTCGAACCCGGAGAGATTTGCCTGCTTCTTGAGTTCTGGACTAAAGGCCAGCTGGACTGCAGAGTaGAAGCAGGAGTTAGTATTC | + |
Preference number: 4 (lower is better) Translates to: LASNPERFACFLSSGLKASWTAE*KQELVF Trigger: GAATACTAACTCCTGCTTCCACTCTGCAGTCCAGCT...GGCCTTTAGTCCAGAACTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CAA 72 bp | GTGCTGAATATTAAACTTGGAGCCTTGACCAGAACCTaGTCTTGGCTTCATCCTTCTCTAGCCCCGCCCCCT | + |
Preference number: 4 (lower is better) Translates to: VLNIKLGALTRT*SWLHPSLAPPP Trigger: AGGGGGCGGGGCTAGAGAAGGATGAAGCCAAGACAAGGTTCTGGTCAAGGCTCCAAGTTTAATATTCAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR TCA 90 bp | AATCACCCTTTGGGGAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAGTGGATGGTGCTATGCTTGGTaGCCCTGGTGGAAGATGTGG | + |
Preference number: 4 (lower is better) Translates to: NHPLGKQGRWYSAQKSSGWCYAW*PWWKMW Trigger: CCACATCTTCCACCAGGGTCACCAAGCATAGCACCA...TCCACTGCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | AATCACCCTTTGGGGAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAGTGGAGTAGTTGTCATACTGTaGAGCCACACAGCCACCGCC | + |
Preference number: 4 (lower is better) Translates to: NHPLGKQGRWYSAQKSSGVVVIL*SHTATA Trigger: GGCGGTGGCTGTGTGGCTGCACAGTATGACAACTAC...TCCACTGCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | TTGGCCTCGAACCCGGAGAGATTTGCCTGCTTCTTGAGTTCTGGACTAAAGGCCTCATTATTCCAAGGGTaGAGCATCTCTATTGTCCCA | + |
Preference number: 4 (lower is better) Translates to: LASNPERFACFLSSGLKASLFQG*SISIVP Trigger: TGGGACAATAGAGATGCTGCACCCTTGGAATAATGA...GGCCTTTAGTCCAGAACTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | CTGCTCACTAACCACTCAACTGTGAGTGCAATGTCTTTGGAGTCCATTAGAGAGAATGGCGCACTGTTCTaGGCCCCATCCAAATCCTCT | + |
Preference number: 4 (lower is better) Translates to: LLTNHSTVSAMSLESIRENGALF*APSKSS Trigger: AGAGGATTTGGATGGGGCCCAGAACAGTGCGCCATT...CTCTCTAATGGACTCCAAAGACATTGCACTCACAGTTGAGTGGTTAGTGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | GAGACAGGGTTTTTCTATGTAGCCCTGGGTGTCCTGGAACCCTTTATATACACCGCATCTTTCAGATGCTaGGTGACCTCAAGGGGCTTA | + |
Preference number: 4 (lower is better) Translates to: ETGFFYVALGVLEPFIYTASFRC*VTSRGL Trigger: TAAGCCCCTTGAGGTCACCCAGCATCTGAAAGATGC...GGTGTATATAAAGGGTTCCAGGACACCCAGGGCTACATAGAAAAACCCTGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | GGAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATTGGGAATCTGGTAGCTaGACTGCAGAGTGGAAGCAG | + |
Preference number: 4 (lower is better) Translates to: GDERVEMCLWVDELFGTYWESGS*TAEWKQ Trigger: CTGCTTCCACTCTGCAGTCCAGCTACCAGATTCCCA...ATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | CCCTCTGGTGTACTCAGGGTTCCAGTGGAGATGAAAGAGTGGAGATGTGTCTCTCCTCTAGATCTAAATTaGGCAGAGGACCTATGCTTC | + |
Preference number: 4 (lower is better) Translates to: PSGVLRVPVEMKEWRCVSPLDLN*AEDLCF Trigger: GAAGCATAGGTCCTCTGCCCAATTTAGATCTAGAGG...AGAGACACATCTCCACTCTTTCATCTCCACTGGAACCCTGAGTACACCAGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | CAGGGATGGTTTGAGTCCTGGTTTTCCACTTCCCCAGGGCTTACAACCTTGATTCTGCATCTGTGGCGGTaGTTTTCATCACAAGTGTAT | + |
Preference number: 4 (lower is better) Translates to: QGWFESWFSTSPGLTTLILHLWR*FSSQVY Trigger: ATACACTTGTGATGAAAATCACCGCCACAGATGCAG...AATCAAGGTTGTAAGCCCTGGGGAAGTGGAAAACCAGGACTCAAACCATCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR TCA 90 bp | GAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATAGACACTCGCATACAGTaGGCTGAAGGACCTGCCTTT | + |
Preference number: 4 (lower is better) Translates to: EMKEWRCVSGWMSYLVPIDTRIQ*AEGPAF Trigger: AAAGGCAGGTCCTTCAGCTCACTGTATGCGAGTGTC...TATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | AATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACTCTGCACAAAAGAGCCAGTCTTTGGCCATGTaGAGGTCGTCTTCCCCATTG | + |
Preference number: 4 (lower is better) Translates to: NANHPLGKQGRWYSAQKSQSLAM*RSSSPL Trigger: CAATGGGGAAGACGACCTTCACATGGCCAAAGACTG...GCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | CTGCTCACTAACCACTCAACTGTGAGTGCAATGTCTTTGGAGTCCATTAGAGAGTTCTTTCTGTCACGGTaGCATTCTGTCCTCCTGCTG | + |
Preference number: 4 (lower is better) Translates to: LLTNHSTVSAMSLESIREFFLSR*HSVLLL Trigger: CAGCAGGAGGACAGAATGTCACCGTGACAGAAAGAA...CTCTCTAATGGACTCCAAAGACATTGCACTCACAGTTGAGTGGTTAGTGAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | AATCACCCTTTGGGGAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAGTGGACCGTCAAGGAATAGCTaGTGTGTTCCTCTCTGTCCA | + |
Preference number: 4 (lower is better) Translates to: NHPLGKQGRWYSAQKSSGPSRNS*CVPLCP Trigger: TGGACAGAGAGGAACACAGCAGCTATTCCTTGACGG...TCCACTGCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | CTGCTCACTAACCACTCAACTGTGAGTGCAATGTCTTTGGAGTCCATTAGAGAGTATTTTCCACTTCTGTaGCGTTCCAGGAGGCTGGTC | + |
Preference number: 4 (lower is better) Translates to: LLTNHSTVSAMSLESIREYFPLL*RSRRLV Trigger: GACCAGCCTCCTGGAACGGCACAGAAGTGGAAAATA...CTCTCTAATGGACTCCAAAGACATTGCACTCACAGTTGAGTGGTTAGTGAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | GAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATAAGCTGGGAGCAAGGATaGTCTCTCTTTCCCTCACCA | + |
Preference number: 4 (lower is better) Translates to: EMKEWRCVSGWMSYLVPISWEQG*SLFPSP Trigger: TGGTGAGGGAAAGAGAGAGCATCCTTGCTCCCAGCT...TATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | CAGGGATGGTTTGAGTCCTGGTTTTCCACTTCCCCAGGGCTTACAACCTTGATTACTTCTACATTGACCTaGTTTTCTTCCACTGTCCCC | + |
Preference number: 4 (lower is better) Translates to: QGWFESWFSTSPGLTTLITSTLT*FSSTVP Trigger: GGGGACAGTGGAAGAAAACCAGGTCAATGTAGAAGT...AATCAAGGTTGTAAGCCCTGGGGAAGTGGAAAACCAGGACTCAAACCATCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR CCA 90 bp | GGAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATCGAGAAGGCAGTCTTTaGCCATGTGAAGGTCGTCTT | + |
Preference number: 4 (lower is better) Translates to: GDERVEMCLWVDELFGTYREGSL*PCEGRL Trigger: AAGACGACCTTCACATGGCCAAAGACTGCCTTCTCG...ATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | GGAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATCCTTCTGACTCTGCCTaGAAGATACAGAGCTCTCAG | + |
Preference number: 4 (lower is better) Translates to: GDERVEMCLWVDELFGTYPSDSA*KIQSSQ Trigger: CTGAGAGCTCTGTATCTTCCAGGCAGAGTCAGAAGG...ATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | GGAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATGCACTGCTGAGCCTTTaGCATAGGAAGTTTCCGTCA | + |
Preference number: 4 (lower is better) Translates to: GDERVEMCLWVDELFGTYALLSL*HRKFPS Trigger: TGACGGAAACTTCCTATGCCAAAGGCTCAGCAGTGC...ATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | ACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACCACGATCAGGCTCTGTaGCTGTCTGGGAGCCAGGAG | + |
Preference number: 4 (lower is better) Translates to: TNVKTNANHPLGKQGRWYHDQAL*LSGSQE Trigger: CTCCTGGCTCCCAGACAGCCACAGAGCCTGATCGTG...GTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | GAGACAGGGTTTTTCTATGTAGCCCTGGGTGTCCTGGAACCCTTTATATACACCCTGCATCTGTGGCGGTaGTTTTCATCACAAGTGTAT | + |
Preference number: 4 (lower is better) Translates to: ETGFFYVALGVLEPFIYTLHLWR*FSSQVY Trigger: ATACACTTGTGATGAAAATCACCGCCACAGATGCAG...GGTGTATATAAAGGGTTCCAGGACACCCAGGGCTACATAGAAAAACCCTGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | CTGCTCACTAACCACTCAACTGTGAGTGCAATGTCTTTGGAGTCCATTAGAGAGGTGACTTTCTCTGTGTaGACTTCGTGCAGAGGTTTG | + |
Preference number: 4 (lower is better) Translates to: LLTNHSTVSAMSLESIREVTFSV*TSCRGL Trigger: CAAACCTCTGCACGAAGTGCACACAGAGAAAGTCAC...CTCTCTAATGGACTCCAAAGACATTGCACTCACAGTTGAGTGGTTAGTGAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | CAAGGAACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGAATTCTGTCCTCCTGCTaGCACGCTGGGCATTGCCAG | + |
Preference number: 4 (lower is better) Translates to: QGTNVKTNANHPLGKQGRILSSC*HAGHCQ Trigger: CTGGCAATGCCCAGCGTGGCAGCAGGAGGACAGAAT...TCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGTTCCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | GAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATAACGCTGCTCTTGAAATaGATGCCTTCAACCACGTTC | + |
Preference number: 4 (lower is better) Translates to: EMKEWRCVSGWMSYLVPITLLLK*MPSTTF Trigger: GAACGTGGTTGAAGGCATTCATTTCAAGAGCAGCGT...TATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | CAGGGATGGTTTGAGTCCTGGTTTTCCACTTCCCCAGGGCTTACAACCTTGATTATTTACAACTTACCTTaGCAAGGGTCACAATCCCTT | + |
Preference number: 4 (lower is better) Translates to: QGWFESWFSTSPGLTTLIIYNLP*QGSQSL Trigger: AAGGGATTGTGACCCTTGTCAAGGTAAGTTGTAAAT...AATCAAGGTTGTAAGCCCTGGGGAAGTGGAAAACCAGGACTCAAACCATCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR GCA 90 bp | CAGGGATGGTTTGAGTCCTGGTTTTCCACTTCCCCAGGGCTTACAACCTTGATTGAACATATGACTATTTaGAGGCTCCTGAGAGACAAT | + |
Preference number: 4 (lower is better) Translates to: QGWFESWFSTSPGLTTLIEHMTI*RLLRDN Trigger: ATTGTCTCTCAGGAGCCTGCAAATAGTCATATGTTC...AATCAAGGTTGTAAGCCCTGGGGAAGTGGAAAACCAGGACTCAAACCATCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR GCA 90 bp | GAGACAGGGTTTTTCTATGTAGCCCTGGGTGTCCTGGAACCCTTTATATACACCTATGGCCACAACCTTTaGAGTGTAGGTACCATTTTG | + |
Preference number: 4 (lower is better) Translates to: ETGFFYVALGVLEPFIYTYGHNL*SVGTIL Trigger: CAAAATGGTACCTACACTGCAAAGGTTGTGGCCATA...GGTGTATATAAAGGGTTCCAGGACACCCAGGGCTACATAGAAAAACCCTGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | CTGCTCACTAACCACTCAACTGTGAGTGCAATGTCTTTGGAGTCCATTAGAGAGCCCATCCAAATCCTCTaGAGTGACATTCACATATGG | + |
Preference number: 4 (lower is better) Translates to: LLTNHSTVSAMSLESIREPIQIL*SDIHIW Trigger: CCATATGTGAATGTCACTGCAGAGGATTTGGATGGG...CTCTCTAATGGACTCCAAAGACATTGCACTCACAGTTGAGTGGTTAGTGAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | CTTTATATACACCAGATTGGCCTCGAACCCGGAGAGATTTGCCTGCTTCTTGAGCTGGTACTTTCCTGGTaGGTTATTTTCCACTTCTGT | + |
Preference number: 4 (lower is better) Translates to: LYIHQIGLEPGEICLLLELVLSW*VIFHFC Trigger: ACAGAAGTGGAAAATAACGCACCAGGAAAGTACCAG...CTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAATCTGGTGTATATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | CTTTATATACACCAGATTGGCCTCGAACCCGGAGAGATTTGCCTGCTTCTTGAGCACCATTACATACTGTaGATCTTTCAGATGCTGGGT | + |
Preference number: 4 (lower is better) Translates to: LYIHQIGLEPGEICLLLEHHYIL*IFQMLG Trigger: ACCCAGCATCTGAAAGATGCACAGTATGTAATGGTG...CTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAATCTGGTGTATATAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | CTGCTCACTAACCACTCAACTGTGAGTGCAATGTCTTTGGAGTCCATTAGAGAGCCAAATCCTCTGCAGTaGCATTCACATATGGTTCAT | + |
Preference number: 4 (lower is better) Translates to: LLTNHSTVSAMSLESIREPNPLQ*HSHMVH Trigger: ATGAACCATATGTGAATGTCACTGCAGAGGATTTGG...CTCTCTAATGGACTCCAAAGACATTGCACTCACAGTTGAGTGGTTAGTGAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | CAAGGAACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGACGGAAGCTGAGCTGCTaGCTTTCATCATGCCTTCCT | + |
Preference number: 4 (lower is better) Translates to: QGTNVKTNANHPLGKQGRRKLSC*LSSCLP Trigger: AGGAAGGCATGATGAAAGGCAGCAGCTCAGCTTCCG...TCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGTTCCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | GGAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATTGTCAGCAGAAAATATaGTGTTTCTTCCCGGTCAAG | + |
Preference number: 4 (lower is better) Translates to: GDERVEMCLWVDELFGTYCQQKI*CFFPVK Trigger: CTTGACCGGGAAGAAACACCATATTTTCTGCTGACA...ATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | GAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATACACTCAATTCCTCAATaGACCCAACAAAGACCTCCT | + |
Preference number: 4 (lower is better) Translates to: EMKEWRCVSGWMSYLVPIHSIPQ*TQQRPP Trigger: AGGAGGTCTTTGTTGGGTCCATTGAGGAATTGAGTG...TATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | GTCCTTGGACTTTCAACAATCCTCCTTTCAAGTGCTGGGATTATATGTACAAGTTTGAGCTTGCTGGACTaGCTTGTCTGTTATCTGCCC | + |
Preference number: 4 (lower is better) Translates to: VLGLSTILLSSAGIICTSLSLLD*LVCYLP Trigger: GGGCAGATAACAGACAAGCCAGTCCAGCAAGCTCAA...ACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTCCAAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR CCA 90 bp | GGAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATCTCAGAATGGACTTGTaGAAAGCTGCTTTGTTAGTG | + |
Preference number: 4 (lower is better) Translates to: GDERVEMCLWVDELFGTYLRMDL*KAALLV Trigger: CACTAACAAAGCAGCTTTCCACAAGTCCATTCTGAG...ATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | CTGCTCACTAACCACTCAACTGTGAGTGCAATGTCTTTGGAGTCCATTAGAGAGGTTACTTTAGCTGCTTaGCCAGTGTCTTCATCAAAA | + |
Preference number: 4 (lower is better) Translates to: LLTNHSTVSAMSLESIREVTLAA*PVSSSK Trigger: TTTTGATGAAGACACTGGTCAAGCAGCTAAAGTAAC...CTCTCTAATGGACTCCAAAGACATTGCACTCACAGTTGAGTGGTTAGTGAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | GAGACAGGGTTTTTCTATGTAGCCCTGGGTGTCCTGGAACCCTTTATATACACCTATCCCTTTTTCTTCTaGAAGGTCAGAGTGTATCTT | + |
Preference number: 4 (lower is better) Translates to: ETGFFYVALGVLEPFIYTYPFFF*KVRVYL Trigger: AAGATACACTCTGACCTTGCAGAAGAAAAAGGGATA...GGTGTATATAAAGGGTTCCAGGACACCCAGGGCTACATAGAAAAACCCTGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | GGAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATGAACATATGACTATTTaGAGGCTCCTGAGAGACAAT | + |
Preference number: 4 (lower is better) Translates to: GDERVEMCLWVDELFGTYEHMTI*RLLRDN Trigger: ATTGTCTCTCAGGAGCCTGCAAATAGTCATATGTTC...ATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | ACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACTTGAGCTTGCTGGACTaGCTTGTCTGTTATCTGCCC | + |
Preference number: 4 (lower is better) Translates to: TNVKTNANHPLGKQGRWYLSLLD*LVCYLP Trigger: GGGCAGATAACAGACAAGCCAGTCCAGCAAGCTCAA...GTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | AGTGGTTTGTGGAACTTATCTTGTGCCATAGATAATGGCTGGGGTTCTGTGAGAGATGTTCTTTGGATATaGCCACAACCTTTGCAGTGT | + |
Preference number: 4 (lower is better) Translates to: SGLWNLSCAIDNGWGSVRDVLWI*PQPLQC Trigger: ACACTGCAAAGGTTGTGGCCATATCCAAAGAACATC...TCTCACAGAACCCCAGCCATTATCTATGGCACAAGATAAGTTCCACAAACCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | ATGTGCAGAGAAATACACACTATGTATTCTTATCCTGACAGTGTTCTAAAGTCTGCCGTTCCAGGAGGCTaGTCAATGATGGAGAAGCTG | + |
Preference number: 4 (lower is better) Translates to: MCREIHTMYSYPDSVLKSAVPGG*SMMEKL Trigger: CAGCTTCTCCATCATTGACCAGCCTCCTGGAACGGC...AGACTTTAGAACACTGTCAGGATAAGAATACATAGTGTGTATTTCTCTGCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | ATGTGCAGAGAAATACACACTATGTATTCTTATCCTGACAGTGTTCTAAAGTCTGCTGATCCACCAAGGTaGAGGTTGGAGCATACACCC | + |
Preference number: 4 (lower is better) Translates to: MCREIHTMYSYPDSVLKSADPPR*RLEHTP Trigger: GGGTGTATGCTCCAACCTCCACCTTGGTGGATCAGC...AGACTTTAGAACACTGTCAGGATAAGAATACATAGTGTGTATTTCTCTGCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | ATGTGCAGAGAAATACACACTATGTATTCTTATCCTGACAGTGTTCTAAAGTCTCCTGGCTGTCGGAAATaGGGAAGGGAATCTCACTTC | + |
Preference number: 4 (lower is better) Translates to: MCREIHTMYSYPDSVLKSPGCRK*GRESHF Trigger: GAAGTGAGATTCCCTTCCTCATTTCCGACAGCCAGG...AGACTTTAGAACACTGTCAGGATAAGAATACATAGTGTGTATTTCTCTGCACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | ACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACCCCGTTACCATCTCTTaGTTCCACCGTCAAGGAATA | + |
Preference number: 4 (lower is better) Translates to: TNVKTNANHPLGKQGRWYPVTIS*FHRQGI Trigger: TATTCCTTGACGGTGGAAGCAAGAGATGGTAACGGG...GTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | TCTCAGCGTCCTCAGTCTCTTCGTGTACCATATAATAGTGTTAATCTTCGAGGATGTCAGCAGAAAATATaGTGTTTCTTCCCGGTCAAG | + |
Preference number: 4 (lower is better) Translates to: SQRPQSLRVPYNSVNLRGCQQKI*CFFPVK Trigger: CTTGACCGGGAAGAAACACCATATTTTCTGCTGACA...TCCTCGAAGATTAACACTATTATATGGTACACGAAGAGACTGAGGACGCTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR CCA 90 bp | GTCCTTGGACTTTCAACAATCCTCCTTTCAAGTGCTGGGATTATATGTACAAGTCACTCAATTCCTCAATaGACCCAACAAAGACCTCCT | + |
Preference number: 4 (lower is better) Translates to: VLGLSTILLSSAGIICTSHSIPQ*TQQRPP Trigger: AGGAGGTCTTTGTTGGGTCCATTGAGGAATTGAGTG...ACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTCCAAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR CCA 90 bp | AATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAGTGACATTCACATATaGTTCATCCTCACAGACACT | + |
Preference number: 4 (lower is better) Translates to: NANHPLGKQGRWYSAQKSSDIHI*FILTDT Trigger: AGTGTCTGTGAGGATGAACCATATGTGAATGTCACT...GCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CAA 72 bp | GAACTCAATTTTACATGTCCTGTTTGCGAGTATTGCTaGCACAGTACTCTAAAAGGCACTGAGGAACTAGCA | + |
Preference number: 4 (lower is better) Translates to: ELNFTCPVCEYC*HSTLKGTEELA Trigger: TGCTAGTTCCTCAGTGCCTTTTAGAGTACTGTGCAAGCAATACTCGCAAACAGGACATGTAAAATTGAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | AATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACTCTGCACAAAAGAGCCAGGTATATTGTCATTaGCATCCAATATACGGATCT | + |
Preference number: 4 (lower is better) Translates to: NANHPLGKQGRWYSAQKSQVYCH*HPIYGS Trigger: AGATCCGTATATTGGATGTCAATGACAATATACCTG...GCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | ACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACAGACTACGCTGCTCTTaGAATGAATGCCTTCAACCA | + |
Preference number: 4 (lower is better) Translates to: TNVKTNANHPLGKQGRWYRLRCS*NECLQP Trigger: TGGTTGAAGGCATTCATTTCAAGAGCAGCGTAGTCT...GTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | TTCAACAATCCTCCTTTCAAGTGCTGGGATTATATGTACAAGTCACTATATCCACCCGTTACCATCTCTTaGTTCCACCGTCAAGGAATA | + |
Preference number: 4 (lower is better) Translates to: FNNPPFKCWDYMYKSLYPPVTIS*FHRQGI Trigger: TATTCCTTGACGGTGGAAGCAAGAGATGGTAACGGG...TGGATATAGTGACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR GCA 90 bp | ATGTGCAGAGAAATACACACTATGTATTCTTATCCTGACAGTGTTCTAAAGTCTCTTGTCCTCAGGAGGTaGCCCTTCATTATTCCAAGG | + |
Preference number: 4 (lower is better) Translates to: MCREIHTMYSYPDSVLKSLVLRR*PFIIPR Trigger: CCTTGGAATAATGAAGGGGCACCTCCTGAGGACAAG...AGACTTTAGAACACTGTCAGGATAAGAATACATAGTGTGTATTTCTCTGCACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | ATGTGCAGAGAAATACACACTATGTATTCTTATCCTGACAGTGTTCTAAAGTCTCCAGGTTGTTTCCTCTaGAGTCCAATGCATAGCCTG | + |
Preference number: 4 (lower is better) Translates to: MCREIHTMYSYPDSVLKSPGCFL*SPMHSL Trigger: CAGGCTATGCATTGGACTCCAGAGGAAACAACCTGG...AGACTTTAGAACACTGTCAGGATAAGAATACATAGTGTGTATTTCTCTGCACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | CAAGGAACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGAACTTCTACATTGACCTaGTTTTCTTCCACTGTCCCC | + |
Preference number: 4 (lower is better) Translates to: QGTNVKTNANHPLGKQGRTSTLT*FSSTVP Trigger: GGGGACAGTGGAAGAAAACCAGGTCAATGTAGAAGT...TCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGTTCCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR TCA 90 bp | TCTCAGCGTCCTCAGTCTCTTCGTGTACCATATAATAGTGTTAATCTTCGAGGACAGGTATATTGTCATTaGCATCCAATATACGGATCT | + |
Preference number: 4 (lower is better) Translates to: SQRPQSLRVPYNSVNLRGQVYCH*HPIYGS Trigger: AGATCCGTATATTGGATGTCAATGACAATATACCTG...TCCTCGAAGATTAACACTATTATATGGTACACGAAGAGACTGAGGACGCTGAGA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR GCA 90 bp | CAAGGAACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGAGGACTTGTGGAAAGCTaGTTTGTTAGTGACAATGAT | + |
Preference number: 4 (lower is better) Translates to: QGTNVKTNANHPLGKQGRGLVES*FVSDND Trigger: ATCATTGTCACTAACAAAGCAGCTTTCCACAAGTCC...TCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGTTCCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | ACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACGGACTTTTTCTTCATTaGCATAATGCTGATCCACCA | + |
Preference number: 4 (lower is better) Translates to: TNVKTNANHPLGKQGRWYGLFLH*HNADPP Trigger: TGGTGGATCAGCATTATGCCAATGAAGAAAAAGTCC...GTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR GCA 90 bp | ACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACATATGTTACTTTAGCTaGTTGACCAGTGTCTTCATC | + |
Preference number: 4 (lower is better) Translates to: TNVKTNANHPLGKQGRWYICYFS*LTSVFI Trigger: GATGAAGACACTGGTCAAGCAGCTAAAGTAACATAT...GTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CCA 90 bp | ATGTGCAGAGAAATACACACTATGTATTCTTATCCTGACAGTGTTCTAAAGTCTACACTGGTACTTTCCTaGTGCGTTATTTTCCACTTC | + |
Preference number: 4 (lower is better) Translates to: MCREIHTMYSYPDSVLKSTLVLS*CVIFHF Trigger: GAAGTGGAAAATAACGCACCAGGAAAGTACCAGTGT...AGACTTTAGAACACTGTCAGGATAAGAATACATAGTGTGTATTTCTCTGCACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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3UTR CAA 72 bp | TTCGTGTACCATATAATAGTGTTAATCTTCGAGGACTaGTACCTAACCAATTATGGCAAATGGATGTTACCC | + |
Preference number: 4 (lower is better) Translates to: FVYHIIVLIFED*YLTNYGKWMLP Trigger: GGGTAACATCCATTTGCCATAATTGGTTAGGTACAAGTCCTCGAAGATTAACACTATTATATGGTACACGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR GCA 90 bp | GACTTTCAACAATCCTCCTTTCAAGTGCTGGGATTATATGTACAAGTCACTATATATCCCTTTTTCTTCTaGAAGGTCAGAGTGTATCTT | + |
Preference number: 4 (lower is better) Translates to: DFQQSSFQVLGLYVQVTIYPFFF*KVRVYL Trigger: AAGATACACTCTGACCTTGCAGAAGAAAAAGGGATA...TATAGTGACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR GCA 90 bp | ACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACCAGTTGTCAGTGTCTTaGACTTTTACATATGTTACT | + |
Preference number: 4 (lower is better) Translates to: TNVKTNANHPLGKQGRWYQLSVS*TFTYVT Trigger: AGTAACATATGTAAAAGTGCAAGACACTGACAACTG...GTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 90 bp | GCAGCCACACAGCCACCGCCCTTCAGACACTCGCATACAGTGAGCTaGAGGACCTGCCTTTCGGGGCAGCTGAAGCCCTGGCTGTCGGAA | + |
Preference number: 5 (lower is better) Translates to: AATQPPPFRHSHTVS*RTCLSGQLKPWLSE Trigger: TTCCGACAGCCAGGGCTTCAGCTGCCCCGAAAGGCAGGTCCTTCAGCTCACTGTATGCGAGTGTCTGAAGGGCGGTGGCTGTGTGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | GAGAGCGATGGCGGCAGGGCCCAACCCGACGTAGTTGTCATACTGTaGAGCCACACAGCCACCGCCCTTCAGACACTCGCATACAGTGAG | + |
Preference number: 5 (lower is better) Translates to: ESDGGRAQPDVVVIL*SHTATALQTLAYSE Trigger: CTCACTGTATGCGAGTGTCTGAAGGGCGGTGGCTGTGTGGCTGCACAGTATGACAACTACGTCGGGTTGGGCCCTGCCGCCATCGCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | ACATTCTGTCCTCCTGCTGCCACGCTGGGCATTGCCAGAGTGGGCTaGACGCCTGAGCTGGGAGCAAGGATGCTCTCTCTTTCCCTCACC | + |
Preference number: 5 (lower is better) Translates to: TFCPPAATLGIARVG*TPELGARMLSLSLT Trigger: GGTGAGGGAAAGAGAGAGCATCCTTGCTCCCAGCTCAGGCGTGCAGCCCACTCTGGCAATGCCCAGCGTGGCAGCAGGAGGACAGAATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 90 bp | ACAGCAAGAGCGGCACCAGGAGCAGGAGCAGGAGTGCTAGAATCATaGGAGCGATGGCGGCAGGGCCCAACCCGACGTAGTTGTCATACT | + |
Preference number: 5 (lower is better) Translates to: TARAAPGAGAGVLES*ERWRQGPTRRSCHT Trigger: AGTATGACAACTACGTCGGGTTGGGCCCTGCCGCCATCGCTCTCATGATTCTAGCACTCCTGCTCCTGCTCCTGGTGCCGCTCTTGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 90 bp | TCCTCCTGCTGCCACGCTGGGCATTGCCAGAGTGGGCTGCACGCCTaGGCTGGGAGCAAGGATGCTCTCTCTTTCCCTCACCATTACATA | + |
Preference number: 5 (lower is better) Translates to: SSCCHAGHCQSGLHA*AGSKDALSFPHHYI Trigger: TATGTAATGGTGAGGGAAAGAGAGAGCATCCTTGCTCCCAGCTCAGGCGTGCAGCCCACTCTGGCAATGCCCAGCGTGGCAGCAGGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | CTGTCACGATCAGGCTCTGTGGCTGTCTGGGAGCCAGGAGCACAGTaGTGGGTGGCACTGCTGAGCCTTTGGCATAGGAAGTTTCCGTCA | + |
Preference number: 5 (lower is better) Translates to: LSRSGSVAVWEPGAQ*WVALLSLWHRKFPS Trigger: TGACGGAAACTTCCTATGCCAAAGGCTCAGCAGTGCCACCCAGCACTGTGCTCCTGGCTCCCAGACAGCCACAGAGCCTGATCGTGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 90 bp | CTGCTGCCACGCTGGGCATTGCCAGAGTGGGCTGCACGCCTGAGCTaGGAGCAAGGATGCTCTCTCTTTCCCTCACCATTACATACTGTG | + |
Preference number: 5 (lower is better) Translates to: LLPRWALPEWAARLS*EQGCSLFPSPLHTV Trigger: CACAGTATGTAATGGTGAGGGAAAGAGAGAGCATCCTTGCTCCCAGCTCAGGCGTGCAGCCCACTCTGGCAATGCCCAGCGTGGCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 90 bp | CCGCGTTTCCGCTCGCTCTGCTGCAGCAGCACACTGGTACTTTCCTaGTGCGTTATTTTCCACTTCTGTGCCGTTCCAGGAGGCTGGTCA | + |
Preference number: 5 (lower is better) Translates to: PRFRSLCCSSTLVLS*CVIFHFCAVPGGWS Trigger: TGACCAGCCTCCTGGAACGGCACAGAAGTGGAAAATAACGCACCAGGAAAGTACCAGTGTGCTGCTGCAGCAGAGCGAGCGGAAACGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 90 bp | TCATGTCTCTGGAAGACCCCGTGGCTCTTGTCCTTACGGCTTCGTTaGCAGCGATGGTTCCTGCTGTCCTTACATGGTGAGTGGCCCCAG | + |
Preference number: 5 (lower is better) Translates to: SCLWKTPWLLSLRLR*QRWFLLSLHGEWPQ Trigger: CTGGGGCCACTCACCATGTAAGGACAGCAGGAACCATCGCTGCCAACGAAGCCGTAAGGACAAGAGCCACGGGGTCTTCCAGAGACATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 90 bp | CAGCGATGGTTCCTGCTGTCCTTACATGGTGAGTGGCCCCAGCGGTaGGGAGGCTTCTGTGTTCTTCCCATCTTCCGTCAACCTCAGACA | + |
Preference number: 5 (lower is better) Translates to: QRWFLLSLHGEWPQR*GGFCVLPIFRQPQT Trigger: TGTCTGAGGTTGACGGAAGATGGGAAGAACACAGAAGCCTCCTCACCGCTGGGGCCACTCACCATGTAAGGACAGCAGGAACCATCGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 90 bp | CTTACGGCTTCGTTGGCAGCGATGGTTCCTGCTGTCCTTACATGGTaGGTGGCCCCAGCGGTGAGGAGGCTTCTGTGTTCTTCCCATCTT | + |
Preference number: 5 (lower is better) Translates to: LTASLAAMVPAVLTW*VAPAVRRLLCSSHL Trigger: AAGATGGGAAGAACACAGAAGCCTCCTCACCGCTGGGGCCACTCACCATGTAAGGACAGCAGGAACCATCGCTGCCAACGAAGCCGTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | GGCACCACCTTGTCCTCAGGAGGTGCCCCTTCATTATTCCAAGGGTaGAGCATCTCTATTGTCCCAGGAATGGGGGTGAAGCCTTTGGCG | + |
Preference number: 5 (lower is better) Translates to: GTTLSSGGAPSLFQG*SISIVPGMGVKPLA Trigger: CGCCAAAGGCTTCACCCCCATTCCTGGGACAATAGAGATGCTGCACCCTTGGAATAATGAAGGGGCACCTCCTGAGGACAAGGTGGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | CTCTCAGTGACGATTTCCTGTGTGACTTTCTCTGTGTGCACTTCGTaGAGAGGTTTGGGGGCGGGGAAGCCGGTGTTAGAGGAGTACGCG | + |
Preference number: 5 (lower is better) Translates to: LSVTISCVTFSVCTS*RGLGAGKPVLEEYA Trigger: CGCGTACTCCTCTAACACCGGCTTCCCCGCCCCCAAACCTCTGCACGAAGTGCACACAGAGAAAGTCACACAGGAAATCGTCACTGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 90 bp | TCCGTCAACCTCAGACAGCTCATGCTGCCCTTTGGTAACGGAAGCTaGGCTGCTGCCTTTCATCATGCCTTCCTTGAGCATCGCACCTCC | + |
Preference number: 5 (lower is better) Translates to: SVNLRQLMLPFGNGS*AAAFHHAFLEHRTS Trigger: GGAGGTGCGATGCTCAAGGAAGGCATGATGAAAGGCAGCAGCTCAGCTTCCGTTACCAAAGGGCAGCATGAGCTGTCTGAGGTTGACGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | CGTTTCCGCTCGCTCTGCTGCAGCAGCACACTGGTACTTTCCTGGTaGGTTATTTTCCACTTCTGTGCCGTTCCAGGAGGCTGGTCAATG | + |
Preference number: 5 (lower is better) Translates to: RFRSLCCSSTLVLSW*VIFHFCAVPGGWSM Trigger: CATTGACCAGCCTCCTGGAACGGCACAGAAGTGGAAAATAACGCACCAGGAAAGTACCAGTGTGCTGCTGCAGCAGAGCGAGCGGAAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | ATGATCGGCCACCAGAAGCGATGGCACCACCTTGTCCTCAGGAGGTaGCCCTTCATTATTCCAAGGGTGCAGCATCTCTATTGTCCCAGG | + |
Preference number: 5 (lower is better) Translates to: MIGHQKRWHHLVLRR*PFIIPRVQHLYCPR Trigger: CCTGGGACAATAGAGATGCTGCACCCTTGGAATAATGAAGGGGCACCTCCTGAGGACAAGGTGGTGCCATCGCTTCTGGTGGCCGATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 90 bp | TCTCACTTCTCCCGCGTTTCCGCTCGCTCTGCTGCAGCAGCACACTaGTACTTTCCTGGTGCGTTATTTTCCACTTCTGTGCCGTTCCAG | + |
Preference number: 5 (lower is better) Translates to: SHFSRVSARSAAAAH*YFPGALFSTSVPFQ Trigger: CTGGAACGGCACAGAAGTGGAAAATAACGCACCAGGAAAGTACCAGTGTGCTGCTGCAGCAGAGCGAGCGGAAACGCGGGAGAAGTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 90 bp | GGAGGGAGGCCGTGTCTTCCTGAGAGTAAACGAGAAGGCAGTCTTTaGCCATGTGAAGGTCGTCTTCCCCATTGTAGGAGGCCGCTTTCT | + |
Preference number: 5 (lower is better) Translates to: GGRPCLPESKREGSL*PCEGRLPHCRRPLS Trigger: AGAAAGCGGCCTCCTACAATGGGGAAGACGACCTTCACATGGCCAAAGACTGCCTTCTCGTTTACTCTCAGGAAGACACGGCCTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | GATACAGAGCTCTCAGTGACGATTTCCTGTGTGACTTTCTCTGTGTaGACTTCGTGCAGAGGTTTGGGGGCGGGGAAGCCGGTGTTAGAG | + |
Preference number: 5 (lower is better) Translates to: DTELSVTISCVTFSV*TSCRGLGAGKPVLE Trigger: CTCTAACACCGGCTTCCCCGCCCCCAAACCTCTGCACGAAGTGCACACAGAGAAAGTCACACAGGAAATCGTCACTGAGAGCTCTGTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 90 bp | CTTCTGTGCCGTTCCAGGAGGCTGGTCAATGATGGAGAAGCTGAATaGCGCACTGTTCTGGGCCCCATCCAAATCCTCTGCAGTGACATT | + |
Preference number: 5 (lower is better) Translates to: LLCRSRRLVNDGEAE*RTVLGPIQILCSDI Trigger: AATGTCACTGCAGAGGATTTGGATGGGGCCCAGAACAGTGCGCCATTCAGCTTCTCCATCATTGACCAGCCTCCTGGAACGGCACAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 90 bp | CATTATTCCAAGGGTGCAGCATCTCTATTGTCCCAGGAATGGGGGTaGAGCCTTTGGCGCCCCCTCCACAGTGGCATATCAACAGCAAGA | + |
Preference number: 5 (lower is better) Translates to: HYSKGAASLLSQEWG*SLWRPLHSGISTAR Trigger: TCTTGCTGTTGATATGCCACTGTGGAGGGGGCGCCAAAGGCTTCACCCCCATTCCTGGGACAATAGAGATGCTGCACCCTTGGAATAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 90 bp | CTGTGGCTGTCTGGGAGCCAGGAGCACAGTGCTGGGTGGCACTGCTaGGCCTTTGGCATAGGAAGTTTCCGTCACTATAATATTACCAGA | + |
Preference number: 5 (lower is better) Translates to: LWLSGSQEHSAGWHC*AFGIGSFRHYNITR Trigger: TCTGGTAATATTATAGTGACGGAAACTTCCTATGCCAAAGGCTCAGCAGTGCCACCCAGCACTGTGCTCCTGGCTCCCAGACAGCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | ATGAGGAAGGGAATCTCACTTCTCCCGCGTTTCCGCTCGCTCTGCTaGAGCAGCACACTGGTACTTTCCTGGTGCGTTATTTTCCACTTC | + |
Preference number: 5 (lower is better) Translates to: MRKGISLLPRFRSLC*SSTLVLSWCVIFHF Trigger: GAAGTGGAAAATAACGCACCAGGAAAGTACCAGTGTGCTGCTGCAGCAGAGCGAGCGGAAACGCGGGAGAAGTGAGATTCCCTTCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | GAAATGAGGAAGGGAATCTCACTTCTCCCGCGTTTCCGCTCGCTCTaGTGCAGCAGCACACTGGTACTTTCCTGGTGCGTTATTTTCCAC | + |
Preference number: 5 (lower is better) Translates to: EMRKGISLLPRFRSL*CSSTLVLSWCVIFH Trigger: GTGGAAAATAACGCACCAGGAAAGTACCAGTGTGCTGCTGCAGCAGAGCGAGCGGAAACGCGGGAGAAGTGAGATTCCCTTCCTCATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | GCTGGGAGCAAGGATGCTCTCTCTTTCCCTCACCATTACATACTGTaGATCTTTCAGATGCTGGGTGACCTCAAGGGGCTTAGGGATGCC | + |
Preference number: 5 (lower is better) Translates to: AGSKDALSFPHHYIL*IFQMLGDLKGLRDA Trigger: GGCATCCCTAAGCCCCTTGAGGTCACCCAGCATCTGAAAGATGCACAGTATGTAATGGTGAGGGAAAGAGAGAGCATCCTTGCTCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | TGGGCATTGCCAGAGTGGGCTGCACGCCTGAGCTGGGAGCAAGGATaGTCTCTCTTTCCCTCACCATTACATACTGTGCATCTTTCAGAT | + |
Preference number: 5 (lower is better) Translates to: WALPEWAARLSWEQG*SLFPSPLHTVHLSD Trigger: ATCTGAAAGATGCACAGTATGTAATGGTGAGGGAAAGAGAGAGCATCCTTGCTCCCAGCTCAGGCGTGCAGCCCACTCTGGCAATGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 90 bp | TTAGGGAACGGTTTGCCTTCATTTCTTGGGCTGAAGACCTCTAAGTaGAGTCCGTTTCCAAAGTCCAAGCAGACCACCGCCAGCAGCTGC | + |
Preference number: 5 (lower is better) Translates to: LGNGLPSFLGLKTSK*SPFPKSKQTTASSC Trigger: GCAGCTGCTGGCGGTGGTCTGCTTGGACTTTGGAAACGGACTTCACTTAGAGGTCTTCAGCCCAAGAAATGAAGGCAAACCGTTCCCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS GCA 90 bp | GGAGAAGCTGAATGGCGCACTGTTCTGGGCCCCATCCAAATCCTCTaGAGTGACATTCACATATGGTTCATCCTCACAGACACTCCGTAC | + |
Preference number: 5 (lower is better) Translates to: GEAEWRTVLGPIQIL*SDIHIWFILTDTPY Trigger: GTACGGAGTGTCTGTGAGGATGAACCATATGTGAATGTCACTGCAGAGGATTTGGATGGGGCCCAGAACAGTGCGCCATTCAGCTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | CTTCTGTGTTCTTCCCATCTTCCGTCAACCTCAGACAGCTCATGCTaGCCTTTGGTAACGGAAGCTGAGCTGCTGCCTTTCATCATGCCT | + |
Preference number: 5 (lower is better) Translates to: LLCSSHLPSTSDSSC*PLVTEAELLPFIMP Trigger: AGGCATGATGAAAGGCAGCAGCTCAGCTTCCGTTACCAAAGGGCAGCATGAGCTGTCTGAGGTTGACGGAAGATGGGAAGAACACAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | AGGCTTCTGTGTTCTTCCCATCTTCCGTCAACCTCAGACAGCTCATaGTGCCCTTTGGTAACGGAAGCTGAGCTGCTGCCTTTCATCATG | + |
Preference number: 5 (lower is better) Translates to: RLLCSSHLPSTSDSS*CPLVTEAELLPFIM Trigger: CATGATGAAAGGCAGCAGCTCAGCTTCCGTTACCAAAGGGCAGCATGAGCTGTCTGAGGTTGACGGAAGATGGGAAGAACACAGAAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 90 bp | CCAGGAGGCTGGTCAATGATGGAGAAGCTGAATGGCGCACTGTTCTaGGCCCCATCCAAATCCTCTGCAGTGACATTCACATATGGTTCA | + |
Preference number: 5 (lower is better) Translates to: PGGWSMMEKLNGALF*APSKSSAVTFTYGS Trigger: TGAACCATATGTGAATGTCACTGCAGAGGATTTGGATGGGGCCCAGAACAGTGCGCCATTCAGCTTCTCCATCATTGACCAGCCTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | GAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAGTGGAGCCTCAAAGCCACCGGCGTGGCCTTGTACTaGCTCAGAATGGACTTGTGG | + |
Preference number: 5 (lower is better) Translates to: ETRKMVLCTKEQWSLKATGVALY*LRMDLW Trigger: CCACAAGTCCATTCTGAGCAAGTACAAGGCCACGCC...GGTGGCTTTGAGGCTCCACTGCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | AGTGGTTTGTGGAACTTATCTTGTGCCATAGATAATGGCTGGGGTTCTGTGAGAAGCGATGGCACCACCTaGTCCTCAGGAGGTGCCCCT | + |
Preference number: 5 (lower is better) Translates to: SGLWNLSCAIDNGWGSVRSDGTT*SSGGAP Trigger: AGGGGCACCTCCTGAGGACAAGGTGGTGCCATCGCT...TCTCACAGAACCCCAGCCATTATCTATGGCACAAGATAAGTTCCACAAACCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | AGCTTGCTGGACTGGCTTGTCTGTTATCTGCCCGTTACCATCTCTTaGTTCCACCGTCAAGGAATAGCTGCTGTGTTCCTCTCTGTCCAA | + |
Preference number: 5 (lower is better) Translates to: SLLDWLVCYLPVTIS*FHRQGIAAVFLSVQ Trigger: TTGGACAGAGAGGAACACAGCAGCTATTCCTTGACGGTGGAAGCAAGAGATGGTAACGGGCAGATAACAGACAAGCCAGTCCAGCAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS TCA 90 bp | CCATGTGAAGGTCGTCTTCCCCATTGTAGGAGGCCGCTTTCTCTGTaGAGTAACTTCTTAAGAATTCCTCATTCACGGCAACGGCTCCTC | + |
Preference number: 5 (lower is better) Translates to: PCEGRLPHCRRPLSL*SNFLRIPHSRQRLL Trigger: GAGGAGCCGTTGCCGTGAATGAGGAATTCTTAAGAAGTTACTTCACAGAGAAAGCGGCCTCCTACAATGGGGAAGACGACCTTCACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 90 bp | GACTTTTTCTTCATTGGCATAATGCTGATCCACCAAGGTGGAGGTTaGAGCATACACCCTCTCTGTCACGATCAGGCTCTGTGGCTGTCT | + |
Preference number: 5 (lower is better) Translates to: DFFFIGIMLIHQGGG*SIHPLCHDQALWLS Trigger: AGACAGCCACAGAGCCTGATCGTGACAGAGAGGGTGTATGCTCCAACCTCCACCTTGGTGGATCAGCATTATGCCAATGAAGAAAAAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | AATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACTCTGCACAAAAGAGCCCACCAAGGTGGAGGTaGGAGCATACACCCTCTCTG | + |
Preference number: 5 (lower is better) Translates to: NANHPLGKQGRWYSAQKSPPRWR*EHTPSL Trigger: CAGAGAGGGTGTATGCTCCAACCTCCACCTTGGTGG...GCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | ATGTGCAGAGAAATACACACTATGTATTCTTATCCTGACAGTGTTCTAAAGTCTCTGCCACGCTGGGCATaGCCAGAGTGGGCTGCACGC | + |
Preference number: 5 (lower is better) Translates to: MCREIHTMYSYPDSVLKSLPRWA*PEWAAR Trigger: GCGTGCAGCCCACTCTGGCAATGCCCAGCGTGGCAG...AGACTTTAGAACACTGTCAGGATAAGAATACATAGTGTGTATTTCTCTGCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | TTGGCCTCGAACCCGGAGAGATTTGCCTGCTTCTTGAGTTCTGGACTAAAGGCCGTGGTTATAGTAGAATaGGGACGATCAGATTCCTCT | + |
Preference number: 5 (lower is better) Translates to: LASNPERFACFLSSGLKAVVIVE*GRSDSS Trigger: AGAGGAATCTGATCGTCCCAATTCTACTATAACCAC...GGCCTTTAGTCCAGAACTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 90 bp | TCCATTGCCTCACTAGCTCGGAAAGAGACTACGCTGCTCTTGAAATaGATGCCTTCAACCACGTTCTTGACCTTGACAGTGATGGGAATG | + |
Preference number: 5 (lower is better) Translates to: SIASLARKETTLLLK*MPSTTFLTLTVMGM Trigger: CATTCCCATCACTGTCAAGGTCAAGAACGTGGTTGAAGGCATTCATTTCAAGAGCAGCGTAGTCTCTTTCCGAGCTAGTGAGGCAATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 90 bp | ATAATATTACCAGAAGCCACAGGATCAGGTGGCGGTACTACCTTCTaGCTCTGCCTGGAAGATACAGAGCTCTCAGTGACGATTTCCTGT | + |
Preference number: 5 (lower is better) Translates to: IILPEATGSGGGTTF*LCLEDTELSVTISC Trigger: ACAGGAAATCGTCACTGAGAGCTCTGTATCTTCCAGGCAGAGTCAGAAGGTAGTACCGCCACCTGATCCTGTGGCTTCTGGTAATATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 90 bp | GTCATTGACATCCAATATACGGATCTGAACTTGAGCTTGCTGGACTaGCTTGTCTGTTATCTGCCCGTTACCATCTCTTGCTTCCACCGT | + |
Preference number: 5 (lower is better) Translates to: VIDIQYTDLNLSLLD*LVCYLPVTISCFHR Trigger: ACGGTGGAAGCAAGAGATGGTAACGGGCAGATAACAGACAAGCCAGTCCAGCAAGCTCAAGTTCAGATCCGTATATTGGATGTCAATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS-3UTR CAA 90 bp | CTGGGGGTTGAACCCAGGACCTTACACATGCTAGGCAAGCCATCTACCACTGAGACAGGTATATTGTCATaGACATCCAATATACGGATC | + |
Preference number: 5 (lower is better) Translates to: LGVEPRTLHMLGKPSTTETGILS*TSNIRI Trigger: GATCCGTATATTGGATGTCAATGACAATATACCTGT...CTCAGTGGTAGATGGCTTGCCTAGCATGTGTAAGGTCCTGGGTTCAACCCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR CAA 90 bp | TTGGCCTCGAACCCGGAGAGATTTGCCTGCTTCTTGAGTTCTGGACTAAAGGCCGTCCCCTCATACATTTaGTTTTCTACCACAGGTATA | + |
Preference number: 5 (lower is better) Translates to: LASNPERFACFLSSGLKAVPSYI*FSTTGI Trigger: TATACCTGTGGTAGAAAACAAAATGTATGAGGGGAC...GGCCTTTAGTCCAGAACTCAAGAAGCAGGCAAATCTCTCCGGGTTCGAGGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | AGTGGTTTGTGGAACTTATCTTGTGCCATAGATAATGGCTGGGGTTCTGTGAGAACCACGTTCTTGACCTaGACAGTGATGGGAATGGGC | + |
Preference number: 5 (lower is better) Translates to: SGLWNLSCAIDNGWGSVRTTFLT*TVMGMG Trigger: GCCCATTCCCATCACTGTCAAGGTCAAGAACGTGGT...TCTCACAGAACCCCAGCCATTATCTATGGCACAAGATAAGTTCCACAAACCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | CCCTCTGGTGTACTCAGGGTTCCAGTGGAGATGAAAGAGTGGAGATGTGTCTCTATATGGCCACAACCTTaGCAGTGTAGGTACCATTTT | + |
Preference number: 5 (lower is better) Translates to: PSGVLRVPVEMKEWRCVSIWPQP*QCRYHF Trigger: AAAATGGTACCTACACTGCAAAGGTTGTGGCCATAT...AGAGACACATCTCCACTCTTTCATCTCCACTGGAACCCTGAGTACACCAGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | GAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATATGCATGGTGCTATGCTaGGTGACCCTGGTGGAAGAT | + |
Preference number: 5 (lower is better) Translates to: EMKEWRCVSGWMSYLVPICMVLC*VTLVED Trigger: ATCTTCCACCAGGGTCACCAAGCATAGCACCATGCA...TATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | CCCTCTGGTGTACTCAGGGTTCCAGTGGAGATGAAAGAGTGGAGATGTGTCTCTTTAGGAGTAAGAATGTaGCATGGTGCTATGCTTGGT | + |
Preference number: 5 (lower is better) Translates to: PSGVLRVPVEMKEWRCVSLGVRM*HGAMLG Trigger: ACCAAGCATAGCACCATGCAACATTCTTACTCCTAA...AGAGACACATCTCCACTCTTTCATCTCCACTGGAACCCTGAGTACACCAGAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 90 bp | GACAATTCTGTAGGAGACTTTAGCATTCAGAGTCTCCGGGTCATCTaGATCTGTGGCGGTGATTTTCATCACAAGTGTATGTGCTGCACT | + |
Preference number: 5 (lower is better) Translates to: DNSVGDFSIQSLRVI*ICGGDFHHKCMCCT Trigger: AGTGCAGCACATACACTTGTGATGAAAATCACCGCCACAGATGCAGATGACCCGGAGACTCTGAATGCTAAAGTCTCCTACAGAATTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS-3UTR CAA 90 bp | AATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACTCTGCACAAAAGAGCTGCTTAGGGAACGGTTaGCCTTCATTTCTTGGGCTG | + |
Preference number: 5 (lower is better) Translates to: NANHPLGKQGRWYSAQKSCLGNG*PSFLGL Trigger: CAGCCCAAGAAATGAAGGCAAACCGTTCCCTAAGCA...GCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | AGTGGTTTGTGGAACTTATCTTGTGCCATAGATAATGGCTGGGGTTCTGTGAGACCTTCAACCACGTTCTaGACCTTGACAGTGATGGGA | + |
Preference number: 5 (lower is better) Translates to: SGLWNLSCAIDNGWGSVRPSTTF*TLTVMG Trigger: TCCCATCACTGTCAAGGTCAAGAACGTGGTTGAAGG...TCTCACAGAACCCCAGCCATTATCTATGGCACAAGATAAGTTCCACAAACCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | CAACATAAACCAGCTGAAACAAAGGATGGGTCTGTGGGCTTTCCCTATATAAACGATCTGAACTTGAGCTaGCTGGACTGGCTTGTCTGT | + |
Preference number: 5 (lower is better) Translates to: QHKPAETKDGSVGFPYINDLNLS*LDWLVC Trigger: ACAGACAAGCCAGTCCAGCAAGCTCAAGTTCAGATC...GTTTATATAGGGAAAGCCCACAGACCCATCCTTTGTTTCAGCTGGTTTATGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS GCA 90 bp | TCCCTTCCCAGTGTACTTGTACGTGATTTTTATCCCTTTTTCTTCTaGAAGGTCAGAGTGTATCTTGGCAATCGGGTTCTTTCTGGACAG | + |
Preference number: 5 (lower is better) Translates to: SLPSVLVRDFYPFFF*KVRVYLGNRVLSGQ Trigger: CTGTCCAGAAAGAACCCGATTGCCAAGATACACTCTGACCTTGCAGAAGAAAAAGGGATAAAAATCACGTACAAGTACACTGGGAAGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS GCA 90 bp | AACTTGAAAATTTCCAATCGACCTGCTGAGGCTGGATCTATCCATTaGCTCACTAGCTCGGAAAGAGACTACGCTGCTCTTGAAATGAAT | + |
Preference number: 5 (lower is better) Translates to: NLKISNRPAEAGSIH*LTSSERDYAALEMN Trigger: ATTCATTTCAAGAGCAGCGTAGTCTCTTTCCGAGCTAGTGAGGCAATGGATAGATCCAGCCTCAGCAGGTCGATTGGAAATTTTCAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | AGTGGTTTGTGGAACTTATCTTGTGCCATAGATAATGGCTGGGGTTCTGTGAGACGCATGACTTCTACATaGACCTGGTTTTCTTCCACT | + |
Preference number: 5 (lower is better) Translates to: SGLWNLSCAIDNGWGSVRRMTST*TWFSST Trigger: AGTGGAAGAAAACCAGGTCAATGTAGAAGTCATGCG...TCTCACAGAACCCCAGCCATTATCTATGGCACAAGATAAGTTCCACAAACCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 90 bp | GACATATCTAGATTCAAAGTCAGGAATCTTTACAAGCTTAATCTCTaGAGTGACGGAGTCCACAGAGACCCAGTTGTCAGTGTCTTGCAC | + |
Preference number: 5 (lower is better) Translates to: DISRFKVRNLYKLNL*SDGVHRDPVVSVLH Trigger: GTGCAAGACACTGACAACTGGGTCTCTGTGGACTCCGTCACTTCAGAGATTAAGCTTGTAAAGATTCCTGACTTTGAATCTAGATATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | CAAGGAACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGAGATCTGAACTTGAGCTaGCTGGACTGGCTTGTCTGT | + |
Preference number: 5 (lower is better) Translates to: QGTNVKTNANHPLGKQGRDLNLS*LDWLVC Trigger: ACAGACAAGCCAGTCCAGCAAGCTCAAGTTCAGATC...TCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGTTCCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | GAGACAGGGTTTTTCTATGTAGCCCTGGGTGTCCTGGAACCCTTTATATACACCACAGGTATATTGTCATaGACATCCAATATACGGATC | + |
Preference number: 5 (lower is better) Translates to: ETGFFYVALGVLEPFIYTTGILS*TSNIRI Trigger: GATCCGTATATTGGATGTCAATGACAATATACCTGT...GGTGTATATAAAGGGTTCCAGGACACCCAGGGCTACATAGAAAAACCCTGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | AGTGGTTTGTGGAACTTATCTTGTGCCATAGATAATGGCTGGGGTTCTGTGAGATTGCTCAGAATGGACTaGTGGAAAGCTGCTTTGTTA | + |
Preference number: 5 (lower is better) Translates to: SGLWNLSCAIDNGWGSVRLLRMD*WKAALL Trigger: TAACAAAGCAGCTTTCCACAAGTCCATTCTGAGCAA...TCTCACAGAACCCCAGCCATTATCTATGGCACAAGATAAGTTCCACAAACCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | AATCACCCTTTGGGGAAACAAGGAAGATGGTACTCTGCACAAAAGAGCAGTGGACCAGTTGTCAGTGTCTaGCACTTTTACATATGTTAC | + |
Preference number: 5 (lower is better) Translates to: NHPLGKQGRWYSAQKSSGPVVSV*HFYICY Trigger: GTAACATATGTAAAAGTGCAAGACACTGACAACTGG...TCCACTGCTCTTTTGTGCAGAGTACCATCTTCCTTGTTTCCCCAAAGGGTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | GAGATGAAAGAGTGGAGATGTGTCTCTGGGTGGATGAGCTATTTGGTACCTATAACGGGACAATTGTCATaGACGTCTTCAACAGTGATA | + |
Preference number: 5 (lower is better) Translates to: EMKEWRCVSGWMSYLVPITGQLS*TSSTVI Trigger: TATCACTGTTGAAGACGTCAATGACAATTGTCCCGT...TATAGGTACCAAATAGCTCATCCACCCAGAGACACATCTCCACTCTTTCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | GACTTTCAACAATCCTCCTTTCAAGTGCTGGGATTATATGTACAAGTCACTATATGCTTAGGGAACGGTTaGCCTTCATTTCTTGGGCTG | + |
Preference number: 5 (lower is better) Translates to: DFQQSSFQVLGLYVQVTICLGNG*PSFLGL Trigger: CAGCCCAAGAAATGAAGGCAAACCGTTCCCTAAGCA...TATAGTGACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR CAA 90 bp | CAAGGAACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGATTGATGTCCAGAACTTaGATGCGTAGTTCCAAGGGC | + |
Preference number: 5 (lower is better) Translates to: QGTNVKTNANHPLGKQGRLMSRT*MRSSKG Trigger: GCCCTTGGAACTACGCATCAAAGTTCTGGACATCAA...TCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGTTCCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | CCTAGGTTGTCCTTGGACTTTCAACAATCCTCCTTTCAAGTGCTGGGATTATATAGAACATATGACTATTaGCAGGCTCCTGAGAGACAA | + |
Preference number: 5 (lower is better) Translates to: PRLSLDFQQSSFQVLGLYRTYDY*QAPERQ Trigger: TTGTCTCTCAGGAGCCTGCAAATAGTCATATGTTCT...ATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTCCAAGGACAACCTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR CAA 90 bp | GTCCTTGGACTTTCAACAATCCTCCTTTCAAGTGCTGGGATTATATGTACAAGTCGCATGACTTCTACATaGACCTGGTTTTCTTCCACT | + |
Preference number: 5 (lower is better) Translates to: VLGLSTILLSSAGIICTSRMTST*TWFSST Trigger: AGTGGAAGAAAACCAGGTCAATGTAGAAGTCATGCG...ACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTCCAAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR CAA 90 bp | TTCAACAATCCTCCTTTCAAGTGCTGGGATTATATGTACAAGTCACTATATCCATTGATGTCCAGAACTTaGATGCGTAGTTCCAAGGGC | + |
Preference number: 5 (lower is better) Translates to: FNNPPFKCWDYMYKSLYPLMSRT*MRSSKG Trigger: GCCCTTGGAACTACGCATCAAAGTTCTGGACATCAA...TGGATATAGTGACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS-3UTR CAA 90 bp | ACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGATGGTACACTGGCTCGTTGTCATaGATGTCCAGAACTTTGATG | + |
Preference number: 5 (lower is better) Translates to: TNVKTNANHPLGKQGRWYTGSLS*MSRTLM Trigger: CATCAAAGTTCTGGACATCAATGACAACGAGCCAGT...GTACCATCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | CAAGGAACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGAAGAACATATGACTATTaGCAGGCTCCTGAGAGACAA | + |
Preference number: 5 (lower is better) Translates to: QGTNVKTNANHPLGKQGRRTYDY*QAPERQ Trigger: TTGTCTCTCAGGAGCCTGCAAATAGTCATATGTTCT...TCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGTTCCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | CAAGGAACAAATGTAAAAACGAATGCAAATCACCCTTTGGGGAAACAAGGAAGAACTTCAGCTAGGGTCTaGAATTTAAGGCCAAGATCA | + |
Preference number: 5 (lower is better) Translates to: QGTNVKTNANHPLGKQGRTSARV*NLRPRS Trigger: TGATCTTGGCCTTAAATTCAAGACCCTAGCTGAAGT...TCTTCCTTGTTTCCCCAAAGGGTGATTTGCATTCGTTTTTACATTTGTTCCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS-3UTR CAA 90 bp | GACTTTCAACAATCCTCCTTTCAAGTGCTGGGATTATATGTACAAGTCACTATAGTCCCCTCATACATTTaGTTTTCTACCACAGGTATA | + |
Preference number: 5 (lower is better) Translates to: DFQQSSFQVLGLYVQVTIVPSYI*FSTTGI Trigger: TATACCTGTGGTAGAAAACAAAATGTATGAGGGGAC...TATAGTGACTTGTACATATAATCCCAGCACTTGAAAGGAGGATTGTTGAAAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS GCA 72 bp | CCGTTTCCAAAGTCCAAGCAGACCACCGCCAGCAGCTaGACCAGCAGCAGCAGGGCGCACCGGTCACCCGGG | + |
Preference number: 6 (lower is better) Translates to: PFPKSKQTTASS*TSSSRAHRSPG Trigger: CCCGGGTGACCGGTGCGCCCTGCTGCTGCTGGTGCAGCTGCTGGCGGTGGTCTGCTTGGACTTTGGAAACGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS TCA 72 bp | GCGGCACCAGGAGCAGGAGCAGGAGTGCTAGAATCATaGGAGCGATGGCGGCAGGGCCCAACCCGACGTAGT | + |
Preference number: 6 (lower is better) Translates to: AAPGAGAGVLES*ERWRQGPTRRS Trigger: ACTACGTCGGGTTGGGCCCTGCCGCCATCGCTCTCATGATTCTAGCACTCCTGCTCCTGCTCCTGGTGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | GGCGGCAGGGCCCAACCCGACGTAGTTGTCATACTGTaGAGCCACACAGCCACCGCCCTTCAGACACTCGCA | + |
Preference number: 6 (lower is better) Translates to: GGRAQPDVVVIL*SHTATALQTLA Trigger: TGCGAGTGTCTGAAGGGCGGTGGCTGTGTGGCTGCACAGTATGACAACTACGTCGGGTTGGGCCCTGCCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | CCTCCTGCTGCCACGCTGGGCATTGCCAGAGTGGGCTaGACGCCTGAGCTGGGAGCAAGGATGCTCTCTCTT | + |
Preference number: 6 (lower is better) Translates to: PPAATLGIARVG*TPELGARMLSL Trigger: AAGAGAGAGCATCCTTGCTCCCAGCTCAGGCGTGCAGCCCACTCTGGCAATGCCCAGCGTGGCAGCAGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 72 bp | GGAATGGGGGTGAAGCCTTTGGCGCCCCCTCCACAGTaGCATATCAACAGCAAGAGCGGCACCAGGAGCAGG | + |
Preference number: 6 (lower is better) Translates to: GMGVKPLAPPPQ*HINSKSGTRSR Trigger: CCTGCTCCTGGTGCCGCTCTTGCTGTTGATATGCCACTGTGGAGGGGGCGCCAAAGGCTTCACCCCCATTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 72 bp | CGGAAGCTGAGCTGCTGCCTTTCATCATGCCTTCCTTaGGCATCGCACCTCCTACGCCGCCTCTCACTGCCG | + |
Preference number: 6 (lower is better) Translates to: RKLSCCLSSCLP*ASHLLRRLSLP Trigger: CGGCAGTGAGAGGCGGCGTAGGAGGTGCGATGCTCAAGGAAGGCATGATGAAAGGCAGCAGCTCAGCTTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 72 bp | TGCCGAGCTCTCTGCATGATCGGCCACCAGAAGCGATaGCACCACCTTGTCCTCAGGAGGTGCCCCTTCATT | + |
Preference number: 6 (lower is better) Translates to: CRALCMIGHQKR*HHLVLRRCPFI Trigger: AATGAAGGGGCACCTCCTGAGGACAAGGTGGTGCCATCGCTTCTGGTGGCCGATCATGCAGAGAGCTCGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 72 bp | CGCTGGGCATTGCCAGAGTGGGCTGCACGCCTGAGCTaGGAGCAAGGATGCTCTCTCTTTCCCTCACCATTA | + |
Preference number: 6 (lower is better) Translates to: RWALPEWAARLS*EQGCSLFPSPL Trigger: TAATGGTGAGGGAAAGAGAGAGCATCCTTGCTCCCAGCTCAGGCGTGCAGCCCACTCTGGCAATGCCCAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | ACGGAAGCTGAGCTGCTGCCTTTCATCATGCCTTCCTaGAGCATCGCACCTCCTACGCCGCCTCTCACTGCC | + |
Preference number: 6 (lower is better) Translates to: TEAELLPFIMPS*SIAPPTPPLTA Trigger: GGCAGTGAGAGGCGGCGTAGGAGGTGCGATGCTCAAGGAAGGCATGATGAAAGGCAGCAGCTCAGCTTCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | CAAGGGTGCAGCATCTCTATTGTCCCAGGAATGGGGGTGAAGCCTTaGGCGCCCCCTCCACAGTGGCATATCAACAGCAAGAGCGGCACC | + |
Preference number: 6 (lower is better) Translates to: QGCSISIVPGMGVKP*APPPQWHINSKSGT Trigger: GGTGCCGCTCTTGCTGTTGATATGCCACTGTGGAGGGGGCGCCAAAGGCTTCACCCCCATTCCTGGGACAATAGAGATGCTGCACCCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | CCTTTGGTAACGGAAGCTGAGCTGCTGCCTTTCATCATGCCTTCCTaGAGCATCGCACCTCCTACGCCGCCTCTCACTGCCGAGCTCTCT | + |
Preference number: 6 (lower is better) Translates to: PLVTEAELLPFIMPS*SIAPPTPPLTAELS Trigger: AGAGAGCTCGGCAGTGAGAGGCGGCGTAGGAGGTGCGATGCTCAAGGAAGGCATGATGAAAGGCAGCAGCTCAGCTTCCGTTACCAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 72 bp | TCGTTGGCAGCGATGGTTCCTGCTGTCCTTACATGGTaGGTGGCCCCAGCGGTGAGGAGGCTTCTGTGTTCT | + |
Preference number: 6 (lower is better) Translates to: SLAAMVPAVLTW*VAPAVRRLLCS Trigger: AGAACACAGAAGCCTCCTCACCGCTGGGGCCACTCACCATGTAAGGACAGCAGGAACCATCGCTGCCAACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | TGTGTGACTTTCTCTGTGTGCACTTCGTGCAGAGGTTaGGGGGCGGGGAAGCCGGTGTTAGAGGAGTACGCG | + |
Preference number: 6 (lower is better) Translates to: CVTFSVCTSCRG*GAGKPVLEEYA Trigger: CGCGTACTCCTCTAACACCGGCTTCCCCGCCCCCAAACCTCTGCACGAAGTGCACACAGAGAAAGTCACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | TTCGCCCTCCCGCAGAGCCACAGGGGCAGTGATCCAGGCCCTCTTTaGACGAACCAAGTGAGTGTGCTTAGGGAACGGTTTGCCTTCATT | + |
Preference number: 6 (lower is better) Translates to: FALPQSHRGSDPGPL*TNQVSVLRERFAFI Trigger: AATGAAGGCAAACCGTTCCCTAAGCACACTCACTTGGTTCGTCAAAAGAGGGCCTGGATCACTGCCCCTGTGGCTCTGCGGGAGGGCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CAA 90 bp | ACGATTTCCTGTGTGACTTTCTCTGTGTGCACTTCGTGCAGAGGTTaGGGGGCGGGGAAGCCGGTGTTAGAGGAGTACGCGCTCTCTGAG | + |
Preference number: 6 (lower is better) Translates to: TISCVTFSVCTSCRG*GAGKPVLEEYALSE Trigger: CTCAGAGAGCGCGTACTCCTCTAACACCGGCTTCCCCGCCCCCAAACCTCTGCACGAAGTGCACACAGAGAAAGTCACACAGGAAATCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | AAGGGAATCTCACTTCTCCCGCGTTTCCGCTCGCTCTaGTGCAGCAGCACACTGGTACTTTCCTGGTGCGTT | + |
Preference number: 6 (lower is better) Translates to: KGISLLPRFRSL*CSSTLVLSWCV Trigger: AACGCACCAGGAAAGTACCAGTGTGCTGCTGCAGCAGAGCGAGCGGAAACGCGGGAGAAGTGAGATTCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 72 bp | CGTTCCAGGAGGCTGGTCAATGATGGAGAAGCTGAATaGCGCACTGTTCTGGGCCCCATCCAAATCCTCTGC | + |
Preference number: 6 (lower is better) Translates to: RSRRLVNDGEAE*RTVLGPIQILC Trigger: GCAGAGGATTTGGATGGGGCCCAGAACAGTGCGCCATTCAGCTTCTCCATCATTGACCAGCCTCCTGGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 72 bp | TGGAAGACCCCGTGGCTCTTGTCCTTACGGCTTCGTTaGCAGCGATGGTTCCTGCTGTCCTTACATGGTGAG | + |
Preference number: 6 (lower is better) Translates to: WKTPWLLSLRLR*QRWFLLSLHGE Trigger: CTCACCATGTAAGGACAGCAGGAACCATCGCTGCCAACGAAGCCGTAAGGACAAGAGCCACGGGGTCTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | CCGCAGAGCCACAGGGGCAGTGATCCAGGCCCTCTTTaGACGAACCAAGTGAGTGTGCTTAGGGAACGGTTT | + |
Preference number: 6 (lower is better) Translates to: PQSHRGSDPGPL*TNQVSVLRERF Trigger: AAACCGTTCCCTAAGCACACTCACTTGGTTCGTCAAAAGAGGGCCTGGATCACTGCCCCTGTGGCTCTGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS TCA 72 bp | TTCCTGCTGTCCTTACATGGTGAGTGGCCCCAGCGGTaGGGAGGCTTCTGTGTTCTTCCCATCTTCCGTCAA | + |
Preference number: 6 (lower is better) Translates to: FLLSLHGEWPQR*GGFCVLPIFRQ Trigger: TTGACGGAAGATGGGAAGAACACAGAAGCCTCCTCACCGCTGGGGCCACTCACCATGTAAGGACAGCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 72 bp | CCAGAAGCCACAGGATCAGGTGGCGGTACTACCTTCTaGCTCTGCCTGGAAGATACAGAGCTCTCAGTGACG | + |
Preference number: 6 (lower is better) Translates to: PEATGSGGGTTF*LCLEDTELSVT Trigger: CGTCACTGAGAGCTCTGTATCTTCCAGGCAGAGTCAGAAGGTAGTACCGCCACCTGATCCTGTGGCTTCTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | TCGCTCTGCTGCAGCAGCACACTGGTACTTTCCTGGTaGGTTATTTTCCACTTCTGTGCCGTTCCAGGAGGC | + |
Preference number: 6 (lower is better) Translates to: SLCCSSTLVLSW*VIFHFCAVPGG Trigger: GCCTCCTGGAACGGCACAGAAGTGGAAAATAACGCACCAGGAAAGTACCAGTGTGCTGCTGCAGCAGAGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | GGAATCTCACTTCTCCCGCGTTTCCGCTCGCTCTGCTaGAGCAGCACACTGGTACTTTCCTGGTGCGTTATT | + |
Preference number: 6 (lower is better) Translates to: GISLLPRFRSLC*SSTLVLSWCVI Trigger: AATAACGCACCAGGAAAGTACCAGTGTGCTGCTGCAGCAGAGCGAGCGGAAACGCGGGAGAAGTGAGATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | ACGATTTCCTGTGTGACTTTCTCTGTGTGCACTTCGTaGAGAGGTTTGGGGGCGGGGAAGCCGGTGTTAGAG | + |
Preference number: 6 (lower is better) Translates to: TISCVTFSVCTS*RGLGAGKPVLE Trigger: CTCTAACACCGGCTTCCCCGCCCCCAAACCTCTGCACGAAGTGCACACAGAGAAAGTCACACAGGAAATCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | CCAGAGTGGGCTGCACGCCTGAGCTGGGAGCAAGGATaGTCTCTCTTTCCCTCACCATTACATACTGTGCAT | + |
Preference number: 6 (lower is better) Translates to: PEWAARLSWEQG*SLFPSPLHTVH Trigger: ATGCACAGTATGTAATGGTGAGGGAAAGAGAGAGCATCCTTGCTCCCAGCTCAGGCGTGCAGCCCACTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 72 bp | CGCTCGCTCTGCTGCAGCAGCACACTGGTACTTTCCTaGTGCGTTATTTTCCACTTCTGTGCCGTTCCAGGA | + |
Preference number: 6 (lower is better) Translates to: RSLCCSSTLVLS*CVIFHFCAVPG Trigger: TCCTGGAACGGCACAGAAGTGGAAAATAACGCACCAGGAAAGTACCAGTGTGCTGCTGCAGCAGAGCGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | AGCATCTCTATTGTCCCAGGAATGGGGGTGAAGCCTTaGGCGCCCCCTCCACAGTGGCATATCAACAGCAAG | + |
Preference number: 6 (lower is better) Translates to: SISIVPGMGVKP*APPPQWHINSK Trigger: CTTGCTGTTGATATGCCACTGTGGAGGGGGCGCCAAAGGCTTCACCCCCATTCCTGGGACAATAGAGATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | TCTTCCCATCTTCCGTCAACCTCAGACAGCTCATGCTaGCCTTTGGTAACGGAAGCTGAGCTGCTGCCTTTC | + |
Preference number: 6 (lower is better) Translates to: SSHLPSTSDSSC*PLVTEAELLPF Trigger: GAAAGGCAGCAGCTCAGCTTCCGTTACCAAAGGGCAGCATGAGCTGTCTGAGGTTGACGGAAGATGGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | TGTTCTTCCCATCTTCCGTCAACCTCAGACAGCTCATaGTGCCCTTTGGTAACGGAAGCTGAGCTGCTGCCT | + |
Preference number: 6 (lower is better) Translates to: CSSHLPSTSDSS*CPLVTEAELLP Trigger: AGGCAGCAGCTCAGCTTCCGTTACCAAAGGGCAGCATGAGCTGTCTGAGGTTGACGGAAGATGGGAAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 72 bp | CTCAGACAGCTCATGCTGCCCTTTGGTAACGGAAGCTaGGCTGCTGCCTTTCATCATGCCTTCCTTGAGCAT | + |
Preference number: 6 (lower is better) Translates to: LRQLMLPFGNGS*AAAFHHAFLEH Trigger: ATGCTCAAGGAAGGCATGATGAAAGGCAGCAGCTCAGCTTCCGTTACCAAAGGGCAGCATGAGCTGTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | TTGTCCTCAGGAGGTGCCCCTTCATTATTCCAAGGGTaGAGCATCTCTATTGTCCCAGGAATGGGGGTGAAG | + |
Preference number: 6 (lower is better) Translates to: LSSGGAPSLFQG*SISIVPGMGVK Trigger: CTTCACCCCCATTCCTGGGACAATAGAGATGCTGCACCCTTGGAATAATGAAGGGGCACCTCCTGAGGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 72 bp | CCGTGTCTTCCTGAGAGTAAACGAGAAGGCAGTCTTTaGCCATGTGAAGGTCGTCTTCCCCATTGTAGGAGG | + |
Preference number: 6 (lower is better) Translates to: PCLPESKREGSL*PCEGRLPHCRR Trigger: CCTCCTACAATGGGGAAGACGACCTTCACATGGCCAAAGACTGCCTTCTCGTTTACTCTCAGGAAGACACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | CATCTTCCGTCAACCTCAGACAGCTCATGCTGCCCTTaGGTAACGGAAGCTGAGCTGCTGCCTTTCATCATG | + |
Preference number: 6 (lower is better) Translates to: HLPSTSDSSCCP*VTEAELLPFIM Trigger: CATGATGAAAGGCAGCAGCTCAGCTTCCGTTACCAAAGGGCAGCATGAGCTGTCTGAGGTTGACGGAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | GAGCTTGCTGGACTGGCTTGTCTGTTATCTGCCCGTTACCATCTCTaGCTTCCACCGTCAAGGAATAGCTGCTGTGTTCCTCTCTGTCCA | + |
Preference number: 6 (lower is better) Translates to: ELAGLACLLSARYHL*LPPSRNSCCVPLCP Trigger: TGGACAGAGAGGAACACAGCAGCTATTCCTTGACGGTGGAAGCAAGAGATGGTAACGGGCAGATAACAGACAAGCCAGTCCAGCAAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CAA 90 bp | GGACTTTTTCTTCATTGGCATAATGCTGATCCACCAAGGTGGAGGTaGGAGCATACACCCTCTCTGTCACGATCAGGCTCTGTGGCTGTC | + |
Preference number: 6 (lower is better) Translates to: GLFLHWHNADPPRWR*EHTPSLSRSGSVAV Trigger: GACAGCCACAGAGCCTGATCGTGACAGAGAGGGTGTATGCTCCAACCTCCACCTTGGTGGATCAGCATTATGCCAATGAAGAAAAAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS TCA 72 bp | GGTTTGCCTTCATTTCTTGGGCTGAAGACCTCTAAGTaGAGTCCGTTTCCAAAGTCCAAGCAGACCACCGCC | + |
Preference number: 6 (lower is better) Translates to: GLPSFLGLKTSK*SPFPKSKQTTA Trigger: GGCGGTGGTCTGCTTGGACTTTGGAAACGGACTTCACTTAGAGGTCTTCAGCCCAAGAAATGAAGGCAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS GCA 72 bp | GACTGGCTTGTCTGTTATCTGCCCGTTACCATCTCTTaGTTCCACCGTCAAGGAATAGCTGCTGTGTTCCTC | + |
Preference number: 6 (lower is better) Translates to: DWLVCYLPVTIS*FHRQGIAAVFL Trigger: GAGGAACACAGCAGCTATTCCTTGACGGTGGAAGCAAGAGATGGTAACGGGCAGATAACAGACAAGCCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS GCA 72 bp | GAATGGCGCACTGTTCTGGGCCCCATCCAAATCCTCTaGAGTGACATTCACATATGGTTCATCCTCACAGAC | + |
Preference number: 6 (lower is better) Translates to: EWRTVLGPIQIL*SDIHIWFILTD Trigger: GTCTGTGAGGATGAACCATATGTGAATGTCACTGCAGAGGATTTGGATGGGGCCCAGAACAGTGCGCCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 72 bp | TGGTCAATGATGGAGAAGCTGAATGGCGCACTGTTCTaGGCCCCATCCAAATCCTCTGCAGTGACATTCACA | + |
Preference number: 6 (lower is better) Translates to: WSMMEKLNGALF*APSKSSAVTFT Trigger: TGTGAATGTCACTGCAGAGGATTTGGATGGGGCCCAGAACAGTGCGCCATTCAGCTTCTCCATCATTGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 72 bp | TTCATTGGCATAATGCTGATCCACCAAGGTGGAGGTTaGAGCATACACCCTCTCTGTCACGATCAGGCTCTG | + |
Preference number: 6 (lower is better) Translates to: FIGIMLIHQGGG*SIHPLCHDQAL Trigger: CAGAGCCTGATCGTGACAGAGAGGGTGTATGCTCCAACCTCCACCTTGGTGGATCAGCATTATGCCAATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | GGACTGGCTTGTCTGTTATCTGCCCGTTACCATCTCTaGCTTCCACCGTCAAGGAATAGCTGCTGTGTTCCT | + |
Preference number: 6 (lower is better) Translates to: GLACLLSARYHL*LPPSRNSCCVP Trigger: AGGAACACAGCAGCTATTCCTTGACGGTGGAAGCAAGAGATGGTAACGGGCAGATAACAGACAAGCCAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CAA 72 bp | CTCCGTACAGAGTCCACCAGCACGGGACAATTGTCATaGACGTCTTCAACAGTGATAACGATGGTGCCAGTG | + |
Preference number: 6 (lower is better) Translates to: LRTESTSTGQLS*TSSTVITMVPV Trigger: CACTGGCACCATCGTTATCACTGTTGAAGACGTCAATGACAATTGTCCCGTGCTGGTGGACTCTGTACGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | CTTCATTGGCATAATGCTGATCCACCAAGGTGGAGGTaGGAGCATACACCCTCTCTGTCACGATCAGGCTCT | + |
Preference number: 6 (lower is better) Translates to: LHWHNADPPRWR*EHTPSLSRSGS Trigger: AGAGCCTGATCGTGACAGAGAGGGTGTATGCTCCAACCTCCACCTTGGTGGATCAGCATTATGCCAATGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | TCATCCTCACAGACACTCCGTACAGAGTCCACCAGCACGGGACAATaGTCATTGACGTCTTCAACAGTGATAACGATGGTGCCAGTGATG | + |
Preference number: 6 (lower is better) Translates to: SSSQTLRTESTSTGQ*SLTSSTVITMVPVM Trigger: CATCACTGGCACCATCGTTATCACTGTTGAAGACGTCAATGACAATTGTCCCGTGCTGGTGGACTCTGTACGGAGTGTCTGTGAGGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | ACTGGTACTTTCCTGGTGCGTTATTTTCCACTTCTGTaGCGTTCCAGGAGGCTGGTCAATGATGGAGAAGCT | + |
Preference number: 6 (lower is better) Translates to: TGTFLVRYFPLL*RSRRLVNDGEA Trigger: AGCTTCTCCATCATTGACCAGCCTCCTGGAACGGCACAGAAGTGGAAAATAACGCACCAGGAAAGTACCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | TTCTTGACCTTGACAGTGATGGGAATGGGCGTGGCCTaGTACTTGCTCAGAATGGACTTGTGGAAAGCTGCT | + |
Preference number: 6 (lower is better) Translates to: FLTLTVMGMGVA*YLLRMDLWKAA Trigger: AGCAGCTTTCCACAAGTCCATTCTGAGCAAGTACAAGGCCACGCCCATTCCCATCACTGTCAAGGTCAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | TCAACCACGTTCTTGACCTTGACAGTGATGGGAATGGGCGTGGCCTaGTACTTGCTCAGAATGGACTTGTGGAAAGCTGCTTTGTTAGTG | + |
Preference number: 6 (lower is better) Translates to: STTFLTLTVMGMGVA*YLLRMDLWKAALLV Trigger: CACTAACAAAGCAGCTTTCCACAAGTCCATTCTGAGCAAGTACAAGGCCACGCCCATTCCCATCACTGTCAAGGTCAAGAACGTGGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | AAGGATGCTCTCTCTTTCCCTCACCATTACATACTGTaGATCTTTCAGATGCTGGGTGACCTCAAGGGGCTT | + |
Preference number: 6 (lower is better) Translates to: KDALSFPHHYIL*IFQMLGDLKGL Trigger: AAGCCCCTTGAGGTCACCCAGCATCTGAAAGATGCACAGTATGTAATGGTGAGGGAAAGAGAGAGCATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 72 bp | CGTCACTATAATATTACCAGAAGCCACAGGATCAGGTaGCGGTACTACCTTCTGACTCTGCCTGGAAGATAC | + |
Preference number: 6 (lower is better) Translates to: RHYNITRSHRIR*RYYLLTLPGRY Trigger: GTATCTTCCAGGCAGAGTCAGAAGGTAGTACCGCCACCTGATCCTGTGGCTTCTGGTAATATTATAGTGACG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | GGAATGGGCGTGGCCTTGTACTTGCTCAGAATGGACTaGTGGAAAGCTGCTTTGTTAGTGACAATGATGCTC | + |
Preference number: 6 (lower is better) Translates to: GMGVALYLLRMD*WKAALLVTMML Trigger: GAGCATCATTGTCACTAACAAAGCAGCTTTCCACAAGTCCATTCTGAGCAAGTACAAGGCCACGCCCATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | ACCTTGACAGTGATGGGAATGGGCGTGGCCTTGTACTaGCTCAGAATGGACTTGTGGAAAGCTGCTTTGTTA | + |
Preference number: 6 (lower is better) Translates to: TLTVMGMGVALY*LRMDLWKAALL Trigger: TAACAAAGCAGCTTTCCACAAGTCCATTCTGAGCAAGTACAAGGCCACGCCCATTCCCATCACTGTCAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | CAGTCCCACCCTGGTGGTGGACATTTACAACTTACCTaGACAAGGGTCACAATCCCTTCATTAGTCTGTGTG | + |
Preference number: 6 (lower is better) Translates to: QSHPGGGHLQLT*TRVTIPSLVCV Trigger: CACACAGACTAATGAAGGGATTGTGACCCTTGTCAAGGTAAGTTGTAAATGTCCACCACCAGGGTGGGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120102.8 |
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CDS CAA 90 bp | TACGTGATTTTTATCCCTTTTTCTTCTGCAAGGTCAGAGTGTATCTaGGCAATCGGGTTCTTTCTGGACAGGTCTTCGCCCTCCCGCAGA | + |
Preference number: 6 (lower is better) Translates to: YVIFIPFSSARSECI*AIGFFLDRSSPSRR Trigger: TCTGCGGGAGGGCGAAGACCTGTCCAGAAAGAACCCGATTGCCAAGATACACTCTGACCTTGCAGAAGAAAAAGGGATAAAAATCACGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CAA 90 bp | ACAGTGATGGGAATGGGCGTGGCCTTGTACTTGCTCAGAATGGACTaGTGGAAAGCTGCTTTGTTAGTGACAATGATGCTCAAGTCTAGC | + |
Preference number: 6 (lower is better) Translates to: TVMGMGVALYLLRMD*WKAALLVTMMLKSS Trigger: GCTAGACTTGAGCATCATTGTCACTAACAAAGCAGCTTTCCACAAGTCCATTCTGAGCAAGTACAAGGCCACGCCCATTCCCATCACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | ACGTTCTTGACCTTGACAGTGATGGGAATGGGCGTGGCCTTGTACTaGCTCAGAATGGACTTGTGGAAAGCTGCTTTGTTAGTGACAATG | + |
Preference number: 6 (lower is better) Translates to: TFLTLTVMGMGVALY*LRMDLWKAALLVTM Trigger: CATTGTCACTAACAAAGCAGCTTTCCACAAGTCCATTCTGAGCAAGTACAAGGCCACGCCCATTCCCATCACTGTCAAGGTCAAGAACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | TCACAGACACTCCGTACAGAGTCCACCAGCACGGGACAATTGTCATaGACGTCTTCAACAGTGATAACGATGGTGCCAGTGATGGTTTTT | + |
Preference number: 6 (lower is better) Translates to: SQTLRTESTSTGQLS*TSSTVITMVPVMVF Trigger: AAAAACCATCACTGGCACCATCGTTATCACTGTTGAAGACGTCAATGACAATTGTCCCGTGCTGGTGGACTCTGTACGGAGTGTCTGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | TTTGCTAGCCAGTTATCAGAGCCCACTTCATCTGCATCGGTCACTTaGATCCGCATGACTTCTACATTGACCTGGTTTTCTTCCACTGTC | + |
Preference number: 6 (lower is better) Translates to: FASQLSEPTSSASVT*IRMTSTLTWFSSTV Trigger: GACAGTGGAAGAAAACCAGGTCAATGTAGAAGTCATGCGGATCAAAGTGACCGATGCAGATGAAGTGGGCTCTGATAACTGGCTAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 |
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CDS CAA 90 bp | GTGCTATGCTTGGTGACCCTGGTGGAAGATGTGGTTATAGTAGAATaGGGACGATCAGATTCCTCTAGATCTAAATTGGGCAGAGGACCT | + |
Preference number: 6 (lower is better) Translates to: VLCLVTLVEDVVIVE*GRSDSSRSKLGRGP Trigger: AGGTCCTCTGCCCAATTTAGATCTAGAGGAATCTGATCGTCCCAATTCTACTATAACCACATCTTCCACCAGGGTCACCAAGCATAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | GTAGGAGACTTTAGCATTCAGAGTCTCCGGGTCATCTaGATCTGTGGCGGTGATTTTCATCACAAGTGTATG | + |
Preference number: 6 (lower is better) Translates to: VGDFSIQSLRVI*ICGGDFHHKCM Trigger: CATACACTTGTGATGAAAATCACCGCCACAGATGCAGATGACCCGGAGACTCTGAATGCTAAAGTCTCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CCA 72 bp | TTATCCCTTTTTCTTCTGCAAGGTCAGAGTGTATCTTaGCAATCGGGTTCTTTCTGGACAGGTCTTCGCCCT | + |
Preference number: 6 (lower is better) Translates to: LSLFLLQGQSVS*QSGSFWTGLRP Trigger: AGGGCGAAGACCTGTCCAGAAAGAACCCGATTGCCAAGATACACTCTGACCTTGCAGAAGAAAAAGGGATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CCA 72 bp | ATCCAATATACGGATCTGAACTTGAGCTTGCTGGACTaGCTTGTCTGTTATCTGCCCGTTACCATCTCTTGC | + |
Preference number: 6 (lower is better) Translates to: IQYTDLNLSLLD*LVCYLPVTISC Trigger: GCAAGAGATGGTAACGGGCAGATAACAGACAAGCCAGTCCAGCAAGCTCAAGTTCAGATCCGTATATTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CCA 72 bp | CTTTTTCTTCATTGGCATAATGCTGATCCACCAAGGTaGAGGTTGGAGCATACACCCTCTCTGTCACGATCA | + |
Preference number: 6 (lower is better) Translates to: LFLHWHNADPPR*RLEHTPSLSRS Trigger: TGATCGTGACAGAGAGGGTGTATGCTCCAACCTCCACCTTGGTGGATCAGCATTATGCCAATGAAGAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | GTCATTGACATCCAATATACGGATCTGAACTTGAGCTaGCTGGACTGGCTTGTCTGTTATCTGCCCGTTACC | + |
Preference number: 6 (lower is better) Translates to: VIDIQYTDLNLS*LDWLVCYLPVT Trigger: GGTAACGGGCAGATAACAGACAAGCCAGTCCAGCAAGCTCAAGTTCAGATCCGTATATTGGATGTCAATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CAA 72 bp | GTAGAATTGGGACGATCAGATTCCTCTAGATCTAAATaGGGCAGAGGACCTATGCTTCCCACACTAGAGAGC | + |
Preference number: 6 (lower is better) Translates to: VELGRSDSSRSK*GRGPMLPTLES Trigger: GCTCTCTAGTGTGGGAAGCATAGGTCCTCTGCCCAATTTAGATCTAGAGGAATCTGATCGTCCCAATTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | ACATCCAGATCGATCTTTCGACCTAGGCAAACTTCAGCTAGGGTCTaGAATTTAAGGCCAAGATCATCCAGGAACAGGTCATCGAGTTCT | + |
Preference number: 6 (lower is better) Translates to: TSRSIFRPRQTSARV*NLRPRSSRNRSSSS Trigger: AGAACTCGATGACCTGTTCCTGGATGATCTTGGCCTTAAATTCAAGACCCTAGCTGAAGTTTGCCTAGGTCGAAAGATCGATCTGGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | GTGGTTATAGTAGAATTGGGACGATCAGATTCCTCTAGATCTAAATaGGGCAGAGGACCTATGCTTCCCACACTAGAGAGCACAGTGTTC | + |
Preference number: 6 (lower is better) Translates to: VVIVELGRSDSSRSK*GRGPMLPTLESTVF Trigger: GAACACTGTGCTCTCTAGTGTGGGAAGCATAGGTCCTCTGCCCAATTTAGATCTAGAGGAATCTGATCGTCCCAATTCTACTATAACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | CAAGGGCTTTTCCAGGTTGTTTCCTCTGGAGTCCAATaGATAGCCTGTCAGCAGAAAATATGGTGTTTCTTC | + |
Preference number: 6 (lower is better) Translates to: QGLFQVVSSGVQ*IACQQKIWCFF Trigger: GAAGAAACACCATATTTTCTGCTGACAGGCTATGCATTGGACTCCAGAGGAAACAACCTGGAAAAGCCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CAA 72 bp | TCTGCATCGGTCACTTTGATCCGCATGACTTCTACATaGACCTGGTTTTCTTCCACTGTCCCCTCATACATT | + |
Preference number: 6 (lower is better) Translates to: SASVTLIRMTST*TWFSSTVPSYI Trigger: AATGTATGAGGGGACAGTGGAAGAAAACCAGGTCAATGTAGAAGTCATGCGGATCAAAGTGACCGATGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 |
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CDS CAA 72 bp | CAGTTATCAGAGCCCACTTCATCTGCATCGGTCACTTaGATCCGCATGACTTCTACATTGACCTGGTTTTCT | + |
Preference number: 6 (lower is better) Translates to: QLSEPTSSASVT*IRMTSTLTWFS Trigger: AGAAAACCAGGTCAATGTAGAAGTCATGCGGATCAAAGTGACCGATGCAGATGAAGTGGGCTCTGATAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 |
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CDS CAA 72 bp | AGTGACGGAGTCCACAGAGACCCAGTTGTCAGTGTCTaGCACTTTTACATATGTTACTTTAGCTGCTTGACC | + |
Preference number: 6 (lower is better) Translates to: SDGVHRDPVVSV*HFYICYFSCLT Trigger: GGTCAAGCAGCTAAAGTAACATATGTAAAAGTGCAAGACACTGACAACTGGGTCTCTGTGGACTCCGTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | TCGATCTTTCGACCTAGGCAAACTTCAGCTAGGGTCTaGAATTTAAGGCCAAGATCATCCAGGAACAGGTCA | + |
Preference number: 6 (lower is better) Translates to: SIFRPRQTSARV*NLRPRSSRNRS Trigger: TGACCTGTTCCTGGATGATCTTGGCCTTAAATTCAAGACCCTAGCTGAAGTTTGCCTAGGTCGAAAGATCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | AGGTATATTGTCATTGACATCCAATATACGGATCTGAACTTGAGCTaGCTGGACTGGCTTGTCTGTTATCTGCCCGTTACCATCTCTTGC | + |
Preference number: 6 (lower is better) Translates to: RYIVIDIQYTDLNLS*LDWLVCYLPVTISC Trigger: GCAAGAGATGGTAACGGGCAGATAACAGACAAGCCAGTCCAGCAAGCTCAAGTTCAGATCCGTATATTGGATGTCAATGACAATATACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CAA 90 bp | TACCACAGGTATATTGTCATTGACATCCAATATACGGATCTGAACTaGAGCTTGCTGGACTGGCTTGTCTGTTATCTGCCCGTTACCATC | + |
Preference number: 6 (lower is better) Translates to: YHRYIVIDIQYTDLN*SLLDWLVCYLPVTI Trigger: GATGGTAACGGGCAGATAACAGACAAGCCAGTCCAGCAAGCTCAAGTTCAGATCCGTATATTGGATGTCAATGACAATATACCTGTGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CAA 90 bp | GGCGTGGCCTTGTACTTGCTCAGAATGGACTTGTGGAAAGCTGCTTaGTTAGTGACAATGATGCTCAAGTCTAGCTTCTTCATTTCTTCA | + |
Preference number: 6 (lower is better) Translates to: GVALYLLRMDLWKAA*LVTMMLKSSFFISS Trigger: TGAAGAAATGAAGAAGCTAGACTTGAGCATCATTGTCACTAACAAAGCAGCTTTCCACAAGTCCATTCTGAGCAAGTACAAGGCCACGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CCA 72 bp | TCTGGAGTCCAATGCATAGCCTGTCAGCAGAAAATATaGTGTTTCTTCCCGGTCAAGAATGCTAGTGATGTT | + |
Preference number: 6 (lower is better) Translates to: SGVQCIACQQKI*CFFPVKNASDV Trigger: AACATCACTAGCATTCTTGACCGGGAAGAAACACCATATTTTCTGCTGACAGGCTATGCATTGGACTCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CAA 72 bp | TTGGTGACCCTGGTGGAAGATGTGGTTATAGTAGAATaGGGACGATCAGATTCCTCTAGATCTAAATTGGGC | + |
Preference number: 6 (lower is better) Translates to: LVTLVEDVVIVE*GRSDSSRSKLG Trigger: GCCCAATTTAGATCTAGAGGAATCTGATCGTCCCAATTCTACTATAACCACATCTTCCACCAGGGTCACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | ACGAATATGCCGAAAGGCGGTTCTGTAATTCCCTTCCCAGTGTACTaGTACGTGATTTTTATCCCTTTTTCTTCTGCAAGGTCAGAGTGT | + |
Preference number: 6 (lower is better) Translates to: TNMPKGGSVIPFPVY*YVIFIPFSSARSEC Trigger: ACACTCTGACCTTGCAGAAGAAAAAGGGATAAAAATCACGTACAAGTACACTGGGAAGGGAATTACAGAACCGCCTTTCGGCATATTCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CAA 72 bp | CCCCCGTGTCTTTATTTAGGTAGAACATATGACTATTaGCAGGCTCCTGAGAGACAATTCTGTAGGAGACTT | + |
Preference number: 6 (lower is better) Translates to: PPCLYLGRTYDY*QAPERQFCRRL Trigger: AAGTCTCCTACAGAATTGTCTCTCAGGAGCCTGCAAATAGTCATATGTTCTACCTAAATAAAGACACGGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CAA 72 bp | TATATTGTCATTGACATCCAATATACGGATCTGAACTaGAGCTTGCTGGACTGGCTTGTCTGTTATCTGCCC | + |
Preference number: 6 (lower is better) Translates to: YIVIDIQYTDLN*SLLDWLVCYLP Trigger: GGGCAGATAACAGACAAGCCAGTCCAGCAAGCTCAAGTTCAGATCCGTATATTGGATGTCAATGACAATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CAA 72 bp | TTCAACAGTGATAACGATGGTGCCAGTGATGGTTTTTaGAGGATGTTCTTTGGATATGGCCACAACCTTTGC | + |
Preference number: 6 (lower is better) Translates to: FNSDNDGASDGF*RMFFGYGHNLC Trigger: GCAAAGGTTGTGGCCATATCCAAAGAACATCCTCAAAAAACCATCACTGGCACCATCGTTATCACTGTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 72 bp | TACTTTAGCTGCTTGACCAGTGTCTTCATCAAAAACTaGAAAATTTCCAATCGACCTGCTGAGGCTGGATCT | + |
Preference number: 6 (lower is better) Translates to: YFSCLTSVFIKN*KISNRPAEAGS Trigger: AGATCCAGCCTCAGCAGGTCGATTGGAAATTTTCAAGTTTTTGATGAAGACACTGGTCAAGCAGCTAAAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS CAA 90 bp | TACATATGTTACTTTAGCTGCTTGACCAGTGTCTTCATCAAAAACTaGAAAATTTCCAATCGACCTGCTGAGGCTGGATCTATCCATTGC | + |
Preference number: 6 (lower is better) Translates to: YICYFSCLTSVFIKN*KISNRPAEAGSIHC Trigger: GCAATGGATAGATCCAGCCTCAGCAGGTCGATTGGAAATTTTCAAGTTTTTGATGAAGACACTGGTCAAGCAGCTAAAGTAACATATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | AGTGTACTTGTACGTGATTTTTATCCCTTTTTCTTCTaGAAGGTCAGAGTGTATCTTGGCAATCGGGTTCTT | + |
Preference number: 6 (lower is better) Translates to: SVLVRDFYPFFF*KVRVYLGNRVL Trigger: AAGAACCCGATTGCCAAGATACACTCTGACCTTGCAGAAGAAAAAGGGATAAAAATCACGTACAAGTACACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000059787.15 ENSMUST00000120102.8 ENSMUST00000121837.2 |
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CDS CAA 72 bp | TTAATCTCTGAAGTGACGGAGTCCACAGAGACCCAGTaGTCAGTGTCTTGCACTTTTACATATGTTACTTTA | + |
Preference number: 6 (lower is better) Translates to: LISEVTESTETQ*SVSCTFTYVTL Trigger: TAAAGTAACATATGTAAAAGTGCAAGACACTGACAACTGGGTCTCTGTGGACTCCGTCACTTCAGAGATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |
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CDS GCA 72 bp | TTTTTGAGGATGTTCTTTGGATATGGCCACAACCTTTaGAGTGTAGGTACCATTTTGGACATATCTAGATTC | + |
Preference number: 6 (lower is better) Translates to: FLRMFFGYGHNL*SVGTILDISRF Trigger: GAATCTAGATATGTCCAAAATGGTACCTACACTGCAAAGGTTGTGGCCATATCCAAAGAACATCCTCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059787.15 |