Pregenerated sensors for DSG1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034774Ensembl transcript IDs: ENSMUST00000054128.7
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAATGCCACTGCTGCCTATGCCTCCAACCCCACCTAACTCAGCGGTaGCAGCAATTCCACTCATACCAGCACCAGAAACCACTCTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: QCHCCLCLQPHLTQR*QQFHSYQHQKPLSL Trigger: CAGAGAGAGTGGTTTCTGGTGCTGGTATGAGTGGAATTGCTGGCACCGCTGAGTTAGGTGGGGTTGGAGGCATAGGCAGCAGTGGCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR GCA 90 bp | TCACTGTGGCTCTTCCTTACTCCACAGGTCTCCCATAGCCTGTTCTaGATTATAAATTGGACTGTTAGATTGAGGATGAGGAGGAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: SLWLFLTPQVSHSLF*IINWTVRLRMRRSW Trigger: CCAACTCCTCCTCATCCTCAATCTAACAGTCCAATTTATAATGCAGAACAGGCTATGGGAGACCTGTGGAGTAAGGAAGAGCCACAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR GCA 90 bp | ACTGTCCACAAAGCTAATATTCTCATTTATGTGGTTCTCAGAAAGTaGCAGGCATTGAGTGGAGGGCGTGCAATACATTTAGGCCTGATG | + |
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Preference number: 1 (lower is better) Translates to: TVHKANILIYVVLRK*QALSGGRAIHLGLM Trigger: CATCAGGCCTAAATGTATTGCACGCCCTCCACTCAATGCCTGGCACTTTCTGAGAACCACATAAATGAGAATATTAGCTTTGTGGACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR CCA 90 bp | CCAGACAGGGATATTAGGGGAAAGAATACGGTACTCCAGAAAGGATaGGTGTGGGCTTCTCAAAGAGATACATGTACTCCATGCTTTTTA | + |
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Preference number: 1 (lower is better) Translates to: PDRDIRGKNTVLQKG*VWASQRDTCTPCFL Trigger: TAAAAAGCATGGAGTACATGTATCTCTTTGAGAAGCCCACACCCATCCTTTCTGGAGTACCGTATTCTTTCCCCTAATATCCCTGTCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR TCA 90 bp | TCTGTGATCATGACTACTTGGTATACTGTACTGTACTATACTTTGTaGTTTGACTTCGAGCCATGTTGGGGGAGGCAGATCCAACTGTCT | + |
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Preference number: 1 (lower is better) Translates to: SVIMTTWYTVLYYTL*FDFEPCWGRQIQLS Trigger: AGACAGTTGGATCTGCCTCCCCCAACATGGCTCGAAGTCAAATCACAAAGTATAGTACAGTACAGTATACCAAGTAGTCATGATCACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR CCA 90 bp | CTTCTCAAAGAGATACATGTACTCCATGCTTTTTACAATAACAGTTaGCAGGATTGGGTAGATTATGAAGTTATTACCCTAAATGGTTGC | + |
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Preference number: 1 (lower is better) Translates to: LLKEIHVLHAFYNNS*QDWVDYEVITLNGC Trigger: GCAACCATTTAGGGTAATAACTTCATAATCTACCCAATCCTGCCAACTGTTATTGTAAAAAGCATGGAGTACATGTATCTCTTTGAGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR-3UTR GCA 90 bp | TCCATGTGTTACTATCACTGTGGCTCTTCCTTACTCCACAGGTCTCCCATAGCCTGGCTGTCCCTCCCATaGTCAGCCCAGTGCCACCAA | + |
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Preference number: 2 (lower is better) Translates to: SMCYYHCGSSLLHRSPIAWLSLP*SAQCHQ Trigger: TTGGTGGCACTGGGCTGAGCATGGGAGGGACAGCCA...GGCTATGGGAGACCTGTGGAGTAAGGAAGAGCCACAGTGATAGTAACACATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR-3UTR CCA 90 bp | CATGTGTTACTATCACTGTGGCTCTTCCTTACTCCACAGGTCTCCCATAGCCTGGAGGCACTCCTCATGTaGCCAATAGTGGCTGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: HVLLSLWLFLTPQVSHSLEALLM*PIVAVP Trigger: AGGGACAGCCACTATTGGCCACATGAGGAGTGCCTC...CAGGCTATGGGAGACCTGTGGAGTAAGGAAGAGCCACAGTGATAGTAACACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR-3UTR GCA 90 bp | TATGTGGTTCTCAGAAAGTGCCAGGCATTGAGTGGAGGGCGTGCAATACATTTATGCCACTGCTGCCTATaGCTCCAACCCCACCTAACT | + |
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Preference number: 2 (lower is better) Translates to: YVVLRKCQALSGGRAIHLCHCCL*LQPHLT Trigger: AGTTAGGTGGGGTTGGAGGCATAGGCAGCAGTGGCA...TAAATGTATTGCACGCCCTCCACTCAATGCCTGGCACTTTCTGAGAACCACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAGGATGGGTGTGGGCTTCTCAAAGAGATACATGTACTCCATGCTTTTTAGTGGTTCTCAGAAAGTaGCAGGCATTGAGTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: QKGWVWASQRDTCTPCFLVVLRK*QALSGG Trigger: CCCTCCACTCAATGCCTGGCACTTTCTGAGAACCAC...TAAAAAGCATGGAGTACATGTATCTCTTTGAGAAGCCCACACCCATCCTTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR-3UTR TCA 90 bp | TGTTTCCATGTGTTACTATCACTGTGGCTCTTCCTTACTCCACAGGTCTCCCATCTGTACTATACTTTGTaGTTTGACTTCGAGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: CFHVLLSLWLFLTPQVSHLYYTL*FDFEPC Trigger: ACATGGCTCGAAGTCAAATCACAAAGTATAGTACAG...ATGGGAGACCTGTGGAGTAAGGAAGAGCCACAGTGATAGTAACACATGGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCTCTGTAATGTCACTAGGAGACATTTGGAAGAGGAGTCCAGCCAGTAACTCCCATAGCCTGTTCTaGATTATAAATTGGACTGTT | + |
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Preference number: 2 (lower is better) Translates to: VCSVMSLGDIWKRSPASNSHSLF*IINWTV Trigger: AACAGTCCAATTTATAATGCAGAACAGGCTATGGGA...GTTACTGGCTGGACTCCTCTTCCAAATGTCTCCTAGTGACATTACAGAGCACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR GCA 72 bp | TGCTGCCTATGCCTCCAACCCCACCTAACTCAGCGGTaGCAGCAATTCCACTCATACCAGCACCAGAAACCA | + |
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Preference number: 3 (lower is better) Translates to: CCLCLQPHLTQR*QQFHSYQHQKP Trigger: TGGTTTCTGGTGCTGGTATGAGTGGAATTGCTGGCACCGCTGAGTTAGGTGGGGTTGGAGGCATAGGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR CCA 72 bp | CCACAGGTCTCCCATAGCCTGTTCTGCATTATAAATTaGACTGTTAGATTGAGGATGAGGAGGAGTTGGATG | + |
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Preference number: 3 (lower is better) Translates to: PQVSHSLFCIIN*TVRLRMRRSWM Trigger: CATCCAACTCCTCCTCATCCTCAATCTAACAGTCCAATTTATAATGCAGAACAGGCTATGGGAGACCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR-3UTR CAA 90 bp | TCCATGTGTTACTATCACTGTGGCTCTTCCTTACTCCACAGGTCTCCCATAGCCTGTGATCATGACTACTaGGTATACTGTACTGTACTA | + |
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Preference number: 3 (lower is better) Translates to: SMCYYHCGSSLLHRSPIACDHDY*VYCTVL Trigger: TAGTACAGTACAGTATACCAAGTAGTCATGATCACA...GGCTATGGGAGACCTGTGGAGTAAGGAAGAGCCACAGTGATAGTAACACATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR TCA 72 bp | AAGTTTACCAATGCTAGGGAGCACTCTTCCTCATGGTaGTGTTTCCATGTGTTACTATCACTGTGGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: KFTNAREHSSSW*CFHVLLSLWLF Trigger: GAAGAGCCACAGTGATAGTAACACATGGAAACATCACCATGAGGAAGAGTGCTCCCTAGCATTGGTAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR GCA 72 bp | CTCTTCCTTACTCCACAGGTCTCCCATAGCCTGTTCTaGATTATAAATTGGACTGTTAGATTGAGGATGAGG | + |
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Preference number: 3 (lower is better) Translates to: LFLTPQVSHSLF*IINWTVRLRMR Trigger: CCTCATCCTCAATCTAACAGTCCAATTTATAATGCAGAACAGGCTATGGGAGACCTGTGGAGTAAGGAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR CCA 72 bp | GATATTAGGGGAAAGAATACGGTACTCCAGAAAGGATaGGTGTGGGCTTCTCAAAGAGATACATGTACTCCA | + |
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Preference number: 3 (lower is better) Translates to: DIRGKNTVLQKG*VWASQRDTCTP Trigger: TGGAGTACATGTATCTCTTTGAGAAGCCCACACCCATCCTTTCTGGAGTACCGTATTCTTTCCCCTAATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR TCA 72 bp | TACTTGGTATACTGTACTGTACTATACTTTGTGATTTaGCTTCGAGCCATGTTGGGGGAGGCAGATCCAACT | + |
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Preference number: 3 (lower is better) Translates to: YLVYCTVLYFVI*LRAMLGEADPT Trigger: AGTTGGATCTGCCTCCCCCAACATGGCTCGAAGTCAAATCACAAAGTATAGTACAGTACAGTATACCAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR TCA 72 bp | ATGACTACTTGGTATACTGTACTGTACTATACTTTGTaGTTTGACTTCGAGCCATGTTGGGGGAGGCAGATC | + |
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Preference number: 3 (lower is better) Translates to: MTTWYTVLYYTL*FDFEPCWGRQI Trigger: GATCTGCCTCCCCCAACATGGCTCGAAGTCAAATCACAAAGTATAGTACAGTACAGTATACCAAGTAGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR TCA 72 bp | GAGTGGAGGGCGTGCAATACATTTAGGCCTGATGCCTaGTTTATTGCTATTTTAGCATTCTTGGTACAGAAT | + |
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Preference number: 3 (lower is better) Translates to: EWRACNTFRPDA*FIAILAFLVQN Trigger: ATTCTGTACCAAGAATGCTAAAATAGCAATAAATCAGGCATCAGGCCTAAATGTATTGCACGCCCTCCACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR GCA 72 bp | AAAGCTAATATTCTCATTTATGTGGTTCTCAGAAAGTaGCAGGCATTGAGTGGAGGGCGTGCAATACATTTA | + |
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Preference number: 3 (lower is better) Translates to: KANILIYVVLRK*QALSGGRAIHL Trigger: TAAATGTATTGCACGCCCTCCACTCAATGCCTGGCACTTTCTGAGAACCACATAAATGAGAATATTAGCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR CCA 72 bp | GAGATACATGTACTCCATGCTTTTTACAATAACAGTTaGCAGGATTGGGTAGATTATGAAGTTATTACCCTA | + |
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Preference number: 3 (lower is better) Translates to: EIHVLHAFYNNS*QDWVDYEVITL Trigger: TAGGGTAATAACTTCATAATCTACCCAATCCTGCCAACTGTTATTGTAAAAAGCATGGAGTACATGTATCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CCA 90 bp | GTTGGGGGAGGCAGATCCAACTGTCTAGCTAAAGTGATGGTCAGAGGCACTCCTAATCAGCACCAGAGATaGGGCCCACCACTCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VGGGRSNCLAKVMVRGTPNQHQR*GPPLSL Trigger: CAGAGAGAGTGGTGGGCCCCATCTCTGGTGCTGATT...AGGAGTGCCTCTGACCATCACTTTAGCTAGACAGTTGGATCTGCCTCCCCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CCA 90 bp | TGTCTAGCTAAAGTGATGGTCAGAGGCACTCCTCATGTGGCCAATAGTGGCTGTTATCCCACCAGGCTGTaGCCCTTCTACAGCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: CLAKVMVRGTPHVANSGCYPTRL*PFYSPR Trigger: ACGTGGGCTGTAGAAGGGCCACAGCCTGGTGGGATA...ACAGCCACTATTGGCCACATGAGGAGTGCCTCTGACCATCACTTTAGCTAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR TCA 90 bp | GTTGGGGGAGGCAGATCCAACTGTCTAGCTAAAGTGATGGTCAGAGGCACTCCTGGAACACACAGCCCTTaGCAACATTTAACACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: VGGGRSNCLAKVMVRGTPGTHSP*QHLTQS Trigger: TGACTGTGTTAAATGTTGTCAAGGGCTGTGTGTTCC...AGGAGTGCCTCTGACCATCACTTTAGCTAGACAGTTGGATCTGCCTCCCCCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CCA 90 bp | AATTCCACTCATACCAGCACCAGAAACCACTCTCTCTGTCACAATCACGTTGTGGTGGCACACAGATGGTaGTTATCCCACCAGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: NSTHTSTRNHSLCHNHVVVAHRW*LSHQAV Trigger: CACAGCCTGGTGGGATAACCACCATCTGTGTGCCAC...CACAACGTGATTGTGACAGAGAGAGTGGTTTCTGGTGCTGGTATGAGTGGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR TCA 90 bp | GTGCCAGCAATTCCACTCATACCAGCACCAGAAACCACTCTCTCTGTCACAATCAACTCTCCCACTGTGTaGTTTGCTTCCATTCTACTG | + |
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Preference number: 4 (lower is better) Translates to: VPAIPLIPAPETTLSVTINSPTV*FASILL Trigger: CAGTAGAATGGAAGCAAATCACACAGTGGGAGAGTT...GATTGTGACAGAGAGAGTGGTTTCTGGTGCTGGTATGAGTGGAATTGCTGGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR TCA 90 bp | TGCCAGCAATTCCACTCATACCAGCACCAGAAACCACTCTCTCTGTCACAATCATGTCACCACCACATTTaGAGCTTGCTGGTTATCATG | + |
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Preference number: 4 (lower is better) Translates to: CQQFHSYQHQKPLSLSQSCHHHI*SLLVIM Trigger: CATGATAACCAGCAAGCTTCAAATGTGGTGGTGACA...TGATTGTGACAGAGAGAGTGGTTTCTGGTGCTGGTATGAGTGGAATTGCTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CCA 90 bp | CAATTCCACTCATACCAGCACCAGAAACCACTCTCTCTGTCACAATCACGTTGTCGGTATGTCACTGGTTaGTTTGCAGCACAGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: QFHSYQHQKPLSLSQSRCRYVTG*FAAQSE Trigger: TTCAGACTGTGCTGCAAACCAACCAGTGACATACCG...ACAACGTGATTGTGACAGAGAGAGTGGTTTCTGGTGCTGGTATGAGTGGAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR TCA 90 bp | TGCCAGCAATTCCACTCATACCAGCACCAGAAACCACTCTCTCTGTCACAATCAGCAGCACAGTCTGAATaGATTTTGGCAATTGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: CQQFHSYQHQKPLSLSQSAAQSE*ILAIGF Trigger: AAACCCAATTGCCAAAATTCATTCAGACTGTGCTGC...TGATTGTGACAGAGAGAGTGGTTTCTGGTGCTGGTATGAGTGGAATTGCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR TCA 90 bp | TTACTATCACTGTGGCTCTTCCTTACTCCACAGGTCTCCCATAGCCTGTTCTGCTACTATAAATGTCTTTaGACCTGGCTGGAACACACA | + |
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Preference number: 4 (lower is better) Translates to: LLSLWLFLTPQVSHSLFCYYKCL*TWLEHT Trigger: TGTGTGTTCCAGCCAGGTTCAAAGACATTTATAGTA...GCAGAACAGGCTATGGGAGACCTGTGGAGTAAGGAAGAGCCACAGTGATAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR GCA 90 bp | TACTATCACTGTGGCTCTTCCTTACTCCACAGGTCTCCCATAGCCTGTTCTGCAAAATTACTGTGGTCTTaGCAAAATGTGGGGATATGC | + |
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Preference number: 4 (lower is better) Translates to: YYHCGSSLLHRSPIACSAKLLWS*QNVGIC Trigger: GCATATCCCCACATTTTGGCAAGACCACAGTAATTT...TGCAGAACAGGCTATGGGAGACCTGTGGAGTAAGGAAGAGCCACAGTGATAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR TCA 90 bp | AATTCCACTCATACCAGCACCAGAAACCACTCTCTCTGTCACAATCACGTTGTGGTTTGCAGCACAGTCTaGATGAATTTTGGCAATTGG | + |
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Preference number: 4 (lower is better) Translates to: NSTHTSTRNHSLCHNHVVVCSTV*MNFGNW Trigger: CCAATTGCCAAAATTCATTCAGACTGTGCTGCAAAC...CACAACGTGATTGTGACAGAGAGAGTGGTTTCTGGTGCTGGTATGAGTGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR TCA 90 bp | TGTCTAGCTAAAGTGATGGTCAGAGGCACTCCTCATGTGGCCAATAGTGGCTGTACTGTGAGTCTATATTaGGAAATAATTGACTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CLAKVMVRGTPHVANSGCTVSLY*EIIDWW Trigger: CCACCAGTCAATTATTTCTCAATATAGACTCACAGT...ACAGCCACTATTGGCCACATGAGGAGTGCCTCTGACCATCACTTTAGCTAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CCA 90 bp | CTCATGGTGATGTTTCCATGTGTTACTATCACTGTGGCTCTTCCTTACTCCACATTGCTCCATATGCTGTaGGCAAATTGGTTCAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LMVMFPCVTITVALPYSTLLHML*ANWFSA Trigger: AGCACTGAACCAATTTGCCCACAGCATATGGAGCAA...TGTGGAGTAAGGAAGAGCCACAGTGATAGTAACACATGGAAACATCACCATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| 3UTR CAA 72 bp | CTACTTGGTATACTGTACTGTACTATACTTTGTGATTaGACTTCGAGCCATGTTGGGGGAGGCAGATCCAAC | + |
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Preference number: 4 (lower is better) Translates to: LLGILYCTILCD*TSSHVGGGRSN Trigger: GTTGGATCTGCCTCCCCCAACATGGCTCGAAGTCAAATCACAAAGTATAGTACAGTACAGTATACCAAGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR GCA 90 bp | CAGAAAGGATGGGTGTGGGCTTCTCAAAGAGATACATGTACTCCATGCTTTTTAGCAAGTTGCTCCATATaGTGTGGGCAAATTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: QKGWVWASQRDTCTPCFLASCSI*CGQIGS Trigger: TGAACCAATTTGCCCACAGCATATGGAGCAACTTGC...TAAAAAGCATGGAGTACATGTATCTCTTTGAGAAGCCCACACCCATCCTTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CCA 90 bp | GAGATACATGTACTCCATGCTTTTTACAATAACAGTTGGCAGGATTGGGTAGATGATGCGGTATGTCACTaGTTGGTTTGCAGCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: EIHVLHAFYNNSWQDWVDDAVCH*LVCSTV Trigger: GACTGTGCTGCAAACCAACCAGTGACATACCGCATC...ATCTACCCAATCCTGCCAACTGTTATTGTAAAAAGCATGGAGTACATGTATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CCA 90 bp | CTGTTTTTATCTGTATGTGTGCTCTGTAATGTCACTAGGAGACATTTGGAAGAGATGCTGTGGGCAAATTaGTTCAGTGCTCTGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LFLSVCVLCNVTRRHLEEMLWAN*FSALRR Trigger: CCTCCTCAGAGCACTGAACCAATTTGCCCACAGCAT...CTCTTCCAAATGTCTCCTAGTGACATTACAGAGCACACATACAGATAAAAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR TCA 90 bp | CTGTTTTTATCTGTATGTGTGCTCTGTAATGTCACTAGGAGACATTTGGAAGAGGCTTGCTGGTTATCATaGAAGTGGACAGAGGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LFLSVCVLCNVTRRHLEEACWLS*KWTEGF Trigger: GAAACCCTCTGTCCACTTTCATGATAACCAGCAAGC...CTCTTCCAAATGTCTCCTAGTGACATTACAGAGCACACATACAGATAAAAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR GCA 90 bp | AAAGCTAATATTCTCATTTATGTGGTTCTCAGAAAGTGCCAGGCATTGAGTGGATCAGGTTGCCTATCATaGCAGAGGTTGGTTGGATCA | + |
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Preference number: 4 (lower is better) Translates to: KANILIYVVLRKCQALSGSGCLS*QRLVGS Trigger: TGATCCAACCAACCTCTGGCATGATAGGCAACCTGA...TCCACTCAATGCCTGGCACTTTCTGAGAACCACATAAATGAGAATATTAGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CCA 90 bp | TCCCATAGCCTGTTCTGCATTATAAATTGGACTGTTAGATTGAGGATGAGGAGGTCTCAGAAATTACTGTaGTCTTGCCAAAATGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SHSLFCIINWTVRLRMRRSQKLL*SCQNVG Trigger: CCCCACATTTTGGCAAGACCACAGTAATTTCTGAGA...CCTCCTCATCCTCAATCTAACAGTCCAATTTATAATGCAGAACAGGCTATGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CCA 90 bp | AGCCTGTTCTGCATTATAAATTGGACTGTTAGATTGAGGATGAGGAGGAGTTGGGAATGGTTAGAGAATTaGGTAAACTTGAGCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLFCIINWTVRLRMRRSWEWLEN*VNLSLV Trigger: CACCAGGCTCAAGTTTACCCAATTCTCTAACCATTC...CCAACTCCTCCTCATCCTCAATCTAACAGTCCAATTTATAATGCAGAACAGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CCA 90 bp | CTCAAAGAGATACATGTACTCCATGCTTTTTACAATAACAGTTGGCAGGATTGGTTAGTTCAAATCCTGTaGTTCGTTCTCCTCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LKEIHVLHAFYNNSWQDWLVQIL*FVLLLP Trigger: TGGGAGGAGGAGAACGAACCACAGGATTTGAACTAA...CCAATCCTGCCAACTGTTATTGTAAAAAGCATGGAGTACATGTATCTCTTTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR TCA 90 bp | CTGTTTTTATCTGTATGTGTGCTCTGTAATGTCACTAGGAGACATTTGGAAGAGAACTTGTTTGTAGCTTaGCCTGTTTCACAGTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: LFLSVCVLCNVTRRHLEENLFVA*PVSQSV Trigger: TACAGACTGTGAAACAGGTCAAGCTACAAACAAGTT...CTCTTCCAAATGTCTCCTAGTGACATTACAGAGCACACATACAGATAAAAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR GCA 90 bp | TTTTTATCTGTATGTGTGCTCTGTAATGTCACTAGGAGACATTTGGAAGAGGAGTTCTTAAAGTTATTATaGCTGAGTCAACAACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FLSVCVLCNVTRRHLEEEFLKLL*LSQQPA Trigger: TGCTGGTTGTTGACTCAGGCATAATAACTTTAAGAA...CTCCTCTTCCAAATGTCTCCTAGTGACATTACAGAGCACACATACAGATAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS GCA 90 bp | GGTTATCCCACCAGGCTGTGGCCCTTCTACAGCCCACGTGTGAATTaGTCCATCAGAACATTCTGGAACAGGTTCAAATCCAGCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GYPTRLWPFYSPRVN*SIRTFWNRFKSSST Trigger: GGTGGAGCTGGATTTGAACCTGTTCCAGAATGTTCTGATGGAGCAATTCACACGTGGGCTGTAGAAGGGCCACAGCCTGGTGGGATAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CCA 90 bp | AGGTGGCATTTGTGGCACACAGATGGTGGTTATCCCACCAGGCTGTaGCCCTTCTACAGCCCACGTGTGAATTGCTCCATCAGAACATTC | + |
|
Preference number: 5 (lower is better) Translates to: RWHLWHTDGGYPTRL*PFYSPRVNCSIRTF Trigger: GAATGTTCTGATGGAGCAATTCACACGTGGGCTGTAGAAGGGCCACAGCCTGGTGGGATAACCACCATCTGTGTGCCACAAATGCCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS TCA 90 bp | ACTAGGAACCCCATGATGAGCAGCCCGATGCCTGCAGGACCGAAGTaGACATTGTCTACGTTTGGAGTGATGGATAGAGTCACAGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TRNPMMSSPMPAGPK*TLSTFGVMDRVTGF Trigger: GAAACCTGTGACTCTATCCATCACTCCAAACGTAGACAATGTTCACTTCGGTCCTGCAGGCATCGGGCTGCTCATCATGGGGTTCCTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS TCA 90 bp | AGCACCAGAGATGGGGCCCACCACTCTCTCTGTCACCACCACATTTaGAGCTTGCTGGTTATCATGAAAGTGGACAGAGGGTTTCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: STRDGAHHSLCHHHI*SLLVIMKVDRGFQS Trigger: ACTCTGAAACCCTCTGTCCACTTTCATGATAACCAGCAAGCTTCAAATGTGGTGGTGACAGAGAGAGTGGTGGGCCCCATCTCTGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CAA 90 bp | CATGTGTTACTATCACTGTGGCTCTTCCTTACTCCACAGGTCTCCCATAGCCTGCAGGCTGCAGCAAACTaGATCCATTCTCGTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HVLLSLWLFLTPQVSHSLQAAAN*IHSRFC Trigger: GCAGAAACGAGAATGGATCAAGTTTGCTGCAGCCTG...CAGGCTATGGGAGACCTGTGGAGTAAGGAAGAGCCACAGTGATAGTAACACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CAA 90 bp | GTTGGGGGAGGCAGATCCAACTGTCTAGCTAAAGTGATGGTCAGAGGCACTCCTCTCCCACTGTGTGATTaGCTTCCATTCTACTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: VGGGRSNCLAKVMVRGTPLPLCD*LPFYCL Trigger: TAGACAGTAGAATGGAAGCAAATCACACAGTGGGAG...AGGAGTGCCTCTGACCATCACTTTAGCTAGACAGTTGGATCTGCCTCCCCCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CAA 90 bp | GTGCCAGCAATTCCACTCATACCAGCACCAGAAACCACTCTCTCTGTCACAATCCTGATGGAATGCCACTaGATGGTACCATTTTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VPAIPLIPAPETTLSVTILMECH*MVPFLA Trigger: CGCCAAAAATGGTACCATCAAGTGGCATTCCATCAG...GATTGTGACAGAGAGAGTGGTTTCTGGTGCTGGTATGAGTGGAATTGCTGGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS TCA 90 bp | CTAGCAAGTTGCTCCATATGCTGTGGGCAAATTGGTTCAGTGCTCTaGGGAGGCCAAGAAGGATCAGGATCTGGGTATGAGTCTATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LASCSICCGQIGSVL*GGQEGSGSGYESIS Trigger: AGAAATAGACTCATACCCAGATCCTGATCCTTCTTGGCCTCCTCAGAGCACTGAACCAATTTGCCCACAGCATATGGAGCAACTTGCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS GCA 90 bp | ATAACATTTGTTCCATCTCTTAAGGCAGGTATCTCTAACATGCCATaGAAATCAGCACCAGAGATGGGGCCCACCACTCTCTCTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: ITFVPSLKAGISNMP*KSAPEMGPTTLSVT Trigger: GGTGACAGAGAGAGTGGTGGGCCCCATCTCTGGTGCTGATTTGCATGGCATGTTAGAGATACCTGCCTTAAGAGATGGAACAAATGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CAA 90 bp | GTTGGGGGAGGCAGATCCAACTGTCTAGCTAAAGTGATGGTCAGAGGCACTCCTTCCATAAAATTCATGTaGAGACCCCCATCTCTACAT | + |
|
Preference number: 5 (lower is better) Translates to: VGGGRSNCLAKVMVRGTPSIKFM*RPPSLH Trigger: ATGTAGAGATGGGGGTCTCAACATGAATTTTATGGA...AGGAGTGCCTCTGACCATCACTTTAGCTAGACAGTTGGATCTGCCTCCCCCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CAA 90 bp | CATGTGTTACTATCACTGTGGCTCTTCCTTACTCCACAGGTCTCCCATAGCCTGCTGTCACCACCACATTaGAAGCTTGCTGGTTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: HVLLSLWLFLTPQVSHSLLSPPH*KLAGYH Trigger: ATGATAACCAGCAAGCTTCAAATGTGGTGGTGACAG...CAGGCTATGGGAGACCTGTGGAGTAAGGAAGAGCCACAGTGATAGTAACACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CAA 90 bp | GTGTGCTCTGTAATGTCACTAGGAGACATTTGGAAGAGGAGTCCAGCCAGTAACGAGAATTGGGTAAACTaGAGCCTGGTGCTATTACCC | + |
|
Preference number: 5 (lower is better) Translates to: VCSVMSLGDIWKRSPASNENWVN*SLVLLP Trigger: GGGTAATAGCACCAGGCTCAAGTTTACCCAATTCTC...GTTACTGGCTGGACTCCTCTTCCAAATGTCTCCTAGTGACATTACAGAGCACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CCA 90 bp | GTTGTCAATATATTCTATAACATTGGCATTACCAGGTGGCATTTGTaGCACACAGATGGTGGTTATCCCACCAGGCTGTGGCCCTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: VVNIFYNIGITRWHL*HTDGGYPTRLWPFY Trigger: GTAGAAGGGCCACAGCCTGGTGGGATAACCACCATCTGTGTGCCACAAATGCCACCTGGTAATGCCAATGTTATAGAATATATTGACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS GCA 90 bp | TCTAAGCTCCAGTGGATTCTCCAAGTCTTGACCTTGTGCATTCAGTaGTCGGCAATAGATAATGAAAAAGGGGGTGACTTCACGATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SKLQWILQVLTLCIQ*SAIDNEKGGDFTIN Trigger: GTTGATCGTGAAGTCACCCCCTTTTTCATTATCTATTGCCGAGCACTGAATGCACAAGGTCAAGACTTGGAGAATCCACTGGAGCTTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS GCA 90 bp | CACTCTAACTCTAAGCTCCAGTGGATTCTCCAAGTCTTGACCTTGTaGATTCAGTGCTCGGCAATAGATAATGAAAAAGGGGGTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSNSKLQWILQVLTL*IQCSAIDNEKGGDF Trigger: GAAGTCACCCCCTTTTTCATTATCTATTGCCGAGCACTGAATGCACAAGGTCAAGACTTGGAGAATCCACTGGAGCTTAGAGTTAGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CCA 90 bp | ATTCTCAGAAATTACTGTGGTCTTGCCAAAATGTGGGGATATGCTTaGGTGTCCACTAGCAAGTTGCTCCATATGCTGTGGGCAAATTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILRNYCGLAKMWGYA*VSTSKLLHMLWANW Trigger: CCAATTTGCCCACAGCATATGGAGCAACTTGCTAGTGGACACCCAAGCATATCCCCACATTTTGGCAAGACCACAGTAATTTCTGAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CAA 90 bp | AATTCCACTCATACCAGCACCAGAAACCACTCTCTCTGTCACAATCACGTTGTGATGTCACTGGTTGGTTaGCAGCACAGTCTGAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: NSTHTSTRNHSLCHNHVVMSLVG*QHSLNE Trigger: TTCATTCAGACTGTGCTGCAAACCAACCAGTGACAT...CACAACGTGATTGTGACAGAGAGAGTGGTTTCTGGTGCTGGTATGAGTGGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CAA 90 bp | CAATTCCACTCATACCAGCACCAGAAACCACTCTCTCTGTCACAATCACGTTGTTGGAACACACAGCCCTaGACAACATTTAACACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QFHSYQHQKPLSLSQSRCWNTQP*TTFNTV Trigger: GACTGTGTTAAATGTTGTCAAGGGCTGTGTGTTCCA...ACAACGTGATTGTGACAGAGAGAGTGGTTTCTGGTGCTGGTATGAGTGGAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CAA 90 bp | AATTCCACTCATACCAGCACCAGAAACCACTCTCTCTGTCACAATCACGTTGTGGAAATTACTGTGGTCTaGCCAAAATGTGGGGATATG | + |
|
Preference number: 5 (lower is better) Translates to: NSTHTSTRNHSLCHNHVVEITVV*PKCGDM Trigger: CATATCCCCACATTTTGGCAAGACCACAGTAATTTC...CACAACGTGATTGTGACAGAGAGAGTGGTTTCTGGTGCTGGTATGAGTGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CAA 90 bp | CAATTCCACTCATACCAGCACCAGAAACCACTCTCTCTGTCACAATCACGTTGTGAAGGGAATCATGTATaGATAGCACTGTTCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QFHSYQHQKPLSLSQSRCEGNHV*IALFLH Trigger: ATGAAGGAACAGTGCTATCAATACATGATTCCCTTC...ACAACGTGATTGTGACAGAGAGAGTGGTTTCTGGTGCTGGTATGAGTGGAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CCA 90 bp | TTTGCTTCCATTCTACTGTCTACTATAAATGTCTTTGAACCTGGCTaGAACACACAGCCCTTGACAACATTTAACACAGTCACAGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: FASILLSTINVFEPG*NTQPLTTFNTVTVI Trigger: GATCACTGTGACTGTGTTAAATGTTGTCAAGGGCTGTGTGTTCCAGCCAGGTTCAAAGACATTTATAGTAGACAGTAGAATGGAAGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS-3UTR CAA 90 bp | CTGTTTTTATCTGTATGTGTGCTCTGTAATGTCACTAGGAGACATTTGGAAGAGGGAATGGTTAGAGAATaGGGTAAACTTGAGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LFLSVCVLCNVTRRHLEEGMVRE*GKLEPG Trigger: ACCAGGCTCAAGTTTACCCAATTCTCTAACCATTCC...CTCTTCCAAATGTCTCCTAGTGACATTACAGAGCACACATACAGATAAAAACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS GCA 90 bp | CAAATCCTGTGGTTCGTTCTCCTCCTCCCAGATCTTGCATTTCTCTaGCACAATATTCATTTGTATAAACTCCTGAGTTGTCAATATATT | + |
|
Preference number: 5 (lower is better) Translates to: QILWFVLLLPDLAFL*HNIHLYKLLSCQYI Trigger: AATATATTGACAACTCAGGAGTTTATACAAATGAATATTGTGGCAGAGAAATGCAAGATCTGGGAGGAGGAGAACGAACCACAGGATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS TCA 90 bp | ACATTTAACACAGTCACAGTGATCAAAGTTACTGTGAGTCTATATTaGGAAATAATTGACTGGTGGAATTCAGCTACATTTCGAACACCA | + |
|
Preference number: 5 (lower is better) Translates to: TFNTVTVIKVTVSLY*EIIDWWNSATFRTP Trigger: TGGTGTTCGAAATGTAGCTGAATTCCACCAGTCAATTATTTCTCAATATAGACTCACAGTAACTTTGATCACTGTGACTGTGTTAAATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CCA 72 bp | TGGCATTACCAGGTGGCATTTGTGGCACACAGATGGTaGTTATCCCACCAGGCTGTGGCCCTTCTACAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WHYQVAFVAHRW*LSHQAVALLQP Trigger: GGGCTGTAGAAGGGCCACAGCCTGGTGGGATAACCACCATCTGTGTGCCACAAATGCCACCTGGTAATGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CCA 72 bp | CATTGGCATTACCAGGTGGCATTTGTGGCACACAGATaGTGGTTATCCCACCAGGCTGTGGCCCTTCTACAG | + |
|
Preference number: 6 (lower is better) Translates to: HWHYQVAFVAHR*WLSHQAVALLQ Trigger: CTGTAGAAGGGCCACAGCCTGGTGGGATAACCACCATCTGTGTGCCACAAATGCCACCTGGTAATGCCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS TCA 72 bp | CCCATGATGAGCAGCCCGATGCCTGCAGGACCGAAGTaGACATTGTCTACGTTTGGAGTGATGGATAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PMMSSPMPAGPK*TLSTFGVMDRV Trigger: GACTCTATCCATCACTCCAAACGTAGACAATGTTCACTTCGGTCCTGCAGGCATCGGGCTGCTCATCATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS TCA 72 bp | GATGGGGCCCACCACTCTCTCTGTCACCACCACATTTaGAGCTTGCTGGTTATCATGAAAGTGGACAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: DGAHHSLCHHHI*SLLVIMKVDRG Trigger: CCCTCTGTCCACTTTCATGATAACCAGCAAGCTTCAAATGTGGTGGTGACAGAGAGAGTGGTGGGCCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CAA 90 bp | TGGTTATCCCACCAGGCTGTGGCCCTTCTACAGCCCACGTGTGAATaGCTCCATCAGAACATTCTGGAACAGGTTCAAATCCAGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: WLSHQAVALLQPTCE*LHQNILEQVQIQLH Trigger: GTGGAGCTGGATTTGAACCTGTTCCAGAATGTTCTGATGGAGCAATTCACACGTGGGCTGTAGAAGGGCCACAGCCTGGTGGGATAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CAA 90 bp | CAGCACCAGAGATGGGGCCCACCACTCTCTCTGTCACCACCACATTaGAAGCTTGCTGGTTATCATGAAAGTGGACAGAGGGTTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QHQRWGPPLSLSPPH*KLAGYHESGQRVSE Trigger: CTCTGAAACCCTCTGTCCACTTTCATGATAACCAGCAAGCTTCAAATGTGGTGGTGACAGAGAGAGTGGTGGGCCCCATCTCTGGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CAA 90 bp | GGTCTTGCCAAAATGTGGGGATATGCTTGGGTGTCCACTAGCAAGTaGCTCCATATGCTGTGGGCAAATTGGTTCAGTGCTCTGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLAKMWGYAWVSTSK*LHMLWANWFSALRR Trigger: CCTCCTCAGAGCACTGAACCAATTTGCCCACAGCATATGGAGCAACTTGCTAGTGGACACCCAAGCATATCCCCACATTTTGGCAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS TCA 72 bp | CCAAGGTATCCAGGAAACTCTCATCTAGATCTTCAATaGAACTGCAACAGCCCACGGAGCCTGCAGGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: PRYPGNSHLDLQ*NCNSPRSLQGN Trigger: GTTCCCCTGCAGGCTCCGTGGGCTGTTGCAGTTTCATTGAAGATCTAGATGAGAGTTTCCTGGATACCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS GCA 72 bp | ACCAGGCTGTGGCCCTTCTACAGCCCACGTGTGAATTaGTCCATCAGAACATTCTGGAACAGGTTCAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: TRLWPFYSPRVN*SIRTFWNRFKS Trigger: GGATTTGAACCTGTTCCAGAATGTTCTGATGGAGCAATTCACACGTGGGCTGTAGAAGGGCCACAGCCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS GCA 72 bp | CAAGTTGCTCCATATGCTGTGGGCAAATTGGTTCAGTaGTCTGAGGAGGCCAAGAAGGATCAGGATCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: QVAPYAVGKLVQ*SEEAKKDQDLG Trigger: ACCCAGATCCTGATCCTTCTTGGCCTCCTCAGAGCACTGAACCAATTTGCCCACAGCATATGGAGCAACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CAA 72 bp | CACCAGGCTGTGGCCCTTCTACAGCCCACGTGTGAATaGCTCCATCAGAACATTCTGGAACAGGTTCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: HQAVALLQPTCE*LHQNILEQVQI Trigger: GATTTGAACCTGTTCCAGAATGTTCTGATGGAGCAATTCACACGTGGGCTGTAGAAGGGCCACAGCCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CAA 72 bp | AGATGGGGCCCACCACTCTCTCTGTCACCACCACATTaGAAGCTTGCTGGTTATCATGAAAGTGGACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RWGPPLSLSPPH*KLAGYHESGQR Trigger: CCTCTGTCCACTTTCATGATAACCAGCAAGCTTCAAATGTGGTGGTGACAGAGAGAGTGGTGGGCCCCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS GCA 72 bp | AAATGTGGGGATATGCTTGGGTGTCCACTAGCAAGTTaGTCCATATGCTGTGGGCAAATTGGTTCAGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: KCGDMLGCPLAS*SICCGQIGSVL Trigger: GAGCACTGAACCAATTTGCCCACAGCATATGGAGCAACTTGCTAGTGGACACCCAAGCATATCCCCACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS GCA 72 bp | CATTTGTTCCATCTCTTAAGGCAGGTATCTCTAACATaGCATGCAAATCAGCACCAGAGATGGGGCCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: HLFHLLRQVSLT*HANQHQRWGPP Trigger: TGGTGGGCCCCATCTCTGGTGCTGATTTGCATGGCATGTTAGAGATACCTGCCTTAAGAGATGGAACAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CCA 72 bp | GGGATGCTCAGGTTGCCTATCATGCCAGAGGTTGGTTaGATCACTCTTTCTGTCACAACTACATTTGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GMLRLPIMPEVG*ITLSVTTTFEV Trigger: GACCTCAAATGTAGTTGTGACAGAAAGAGTGATCCAACCAACCTCTGGCATGATAGGCAACCTGAGCATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS TCA 72 bp | TCTGTCACCACCACATTTGAAGCTTGCTGGTTATCATaGAAGTGGACAGAGGGTTTCAGAGTGCCAGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SVTTTFEACWLS*KWTEGFRVPEV Trigger: TACCTCTGGCACTCTGAAACCCTCTGTCCACTTTCATGATAACCAGCAAGCTTCAAATGTGGTGGTGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
||
| CDS CCA 72 bp | ATATTCTATAACATTGGCATTACCAGGTGGCATTTGTaGCACACAGATGGTGGTTATCCCACCAGGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: IFYNIGITRWHL*HTDGGYPTRLW Trigger: CCACAGCCTGGTGGGATAACCACCATCTGTGTGCCACAAATGCCACCTGGTAATGCCAATGTTATAGAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
||
| CDS CAA 72 bp | AAAATGTGGGGATATGCTTGGGTGTCCACTAGCAAGTaGCTCCATATGCTGTGGGCAAATTGGTTCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KMWGYAWVSTSK*LHMLWANWFSA Trigger: AGCACTGAACCAATTTGCCCACAGCATATGGAGCAACTTGCTAGTGGACACCCAAGCATATCCCCACATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
||
| CDS CAA 90 bp | CATCACTCTAACTCTAAGCTCCAGTGGATTCTCCAAGTCTTGACCTaGTGCATTCAGTGCTCGGCAATAGATAATGAAAAAGGGGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: HHSNSKLQWILQVLT*CIQCSAIDNEKGGD Trigger: GTCACCCCCTTTTTCATTATCTATTGCCGAGCACTGAATGCACAAGGTCAAGACTTGGAGAATCCACTGGAGCTTAGAGTTAGAGTGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS GCA 72 bp | CAGTGGATTCTCCAAGTCTTGACCTTGTGCATTCAGTaGTCGGCAATAGATAATGAAAAAGGGGGTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: QWILQVLTLCIQ*SAIDNEKGGDF Trigger: GAAGTCACCCCCTTTTTCATTATCTATTGCCGAGCACTGAATGCACAAGGTCAAGACTTGGAGAATCCACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS GCA 72 bp | TCTAAGCTCCAGTGGATTCTCCAAGTCTTGACCTTGTaGATTCAGTGCTCGGCAATAGATAATGAAAAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SKLQWILQVLTL*IQCSAIDNEKG Trigger: CCCTTTTTCATTATCTATTGCCGAGCACTGAATGCACAAGGTCAAGACTTGGAGAATCCACTGGAGCTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
||
| CDS CAA 72 bp | CACTCTAACTCTAAGCTCCAGTGGATTCTCCAAGTCTaGACCTTGTGCATTCAGTGCTCGGCAATAGATAAT | + |
|
Preference number: 6 (lower is better) Translates to: HSNSKLQWILQV*TLCIQCSAIDN Trigger: ATTATCTATTGCCGAGCACTGAATGCACAAGGTCAAGACTTGGAGAATCCACTGGAGCTTAGAGTTAGAGTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
||
| CDS CAA 72 bp | AATATATTCTATAACATTGGCATTACCAGGTGGCATTaGTGGCACACAGATGGTGGTTATCCCACCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: NIFYNIGITRWH*WHTDGGYPTRL Trigger: CAGCCTGGTGGGATAACCACCATCTGTGTGCCACAAATGCCACCTGGTAATGCCAATGTTATAGAATATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CAA 72 bp | TTTGAGGTCTCTCGAGGGTTAGGAATGGTTAGAGAATaGGGTAAACTTGAGCCTGGTGCTATTACCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: FEVSRGLGMVRE*GKLEPGAITLS Trigger: AGAAAGGGTAATAGCACCAGGCTCAAGTTTACCCAATTCTCTAACCATTCCTAACCCTCGAGAGACCTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CAA 90 bp | TTGATGGTGAACATTGGTGAGTCAGAAGGCTCCTGTCTTATGATCTaGAAGGCTATCATTGAGTTCAAGTTATTTGGCTCATCGGCATCG | + |
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Preference number: 6 (lower is better) Translates to: LMVNIGESEGSCLMI*KAIIEFKLFGSSAS Trigger: CGATGCCGATGAGCCAAATAACTTGAACTCAATGATAGCCTTCAAGATCATAAGACAGGAGCCTTCTGACTCACCAATGTTCACCATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CAA 90 bp | GAGTCTATTTCTTTTCCCAGGCTGATATCTGCCAACTTCTTAAACTaGGGCCCCAAGGTATCCAGGAAACTCTCATCTAGATCTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: ESISFPRLISANFLN*GPKVSRKLSSRSSM Trigger: CATTGAAGATCTAGATGAGAGTTTCCTGGATACCTTGGGGCCCAAGTTTAAGAAGTTGGCAGATATCAGCCTGGGAAAAGAAATAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CCA 72 bp | GTTGTCAATATATTCTATAACATTGGCATTACCAGGTaGCATTTGTGGCACACAGATGGTGGTTATCCCACC | + |
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Preference number: 6 (lower is better) Translates to: VVNIFYNIGITR*HLWHTDGGYPT Trigger: GGTGGGATAACCACCATCTGTGTGCCACAAATGCCACCTGGTAATGCCAATGTTATAGAATATATTGACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CAA 90 bp | TATATCCATCACTCTAACTCTAAGCTCCAGTGGATTCTCCAAGTCTaGACCTTGTGCATTCAGTGCTCGGCAATAGATAATGAAAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: YIHHSNSKLQWILQV*TLCIQCSAIDNEKG Trigger: CCCTTTTTCATTATCTATTGCCGAGCACTGAATGCACAAGGTCAAGACTTGGAGAATCCACTGGAGCTTAGAGTTAGAGTGATGGATATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CAA 90 bp | ACAACTACATTTGAGGTCTCTCGAGGGTTAGGAATGGTTAGAGAATaGGGTAAACTTGAGCCTGGTGCTATTACCCTTTCTGTCACTATA | + |
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Preference number: 6 (lower is better) Translates to: TTTFEVSRGLGMVRE*GKLEPGAITLSVTI Trigger: TATAGTGACAGAAAGGGTAATAGCACCAGGCTCAAGTTTACCCAATTCTCTAACCATTCCTAACCCTCGAGAGACCTCAAATGTAGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CAA 72 bp | AACTCTAAGCTCCAGTGGATTCTCCAAGTCTTGACCTaGTGCATTCAGTGCTCGGCAATAGATAATGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: NSKLQWILQVLT*CIQCSAIDNEK Trigger: TTTTTCATTATCTATTGCCGAGCACTGAATGCACAAGGTCAAGACTTGGAGAATCCACTGGAGCTTAGAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS CAA 90 bp | CTGTCTAGAAAGTTATTCATTGTTCTGATTTCTCCAGTTTTCCTGTaGATGGTGAACATTGGTGAGTCAGAAGGCTCCTGTCTTATGATC | + |
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Preference number: 6 (lower is better) Translates to: LSRKLFIVLISPVFL*MVNIGESEGSCLMI Trigger: GATCATAAGACAGGAGCCTTCTGACTCACCAATGTTCACCATCAACAGGAAAACTGGAGAAATCAGAACAATGAATAACTTTCTAGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS TCA 72 bp | GCAATAGTTGGGAGTGAAGTGTGTTTTCTTCAATTGTaGTGTCATAAGATGACTGCTCCAAGTATGGGATGT | + |
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Preference number: 6 (lower is better) Translates to: AIVGSEVCFLQL*CHKMTAPSMGC Trigger: ACATCCCATACTTGGAGCAGTCATCTTATGACATCACAATTGAAGAAAACACACTTCACTCCCAACTATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS TCA 72 bp | ATTTGCTTCCATTCTACTGTCTACTATAAATGTCTTTaGACCTGGCTGGAACACACAGCCCTTGACAACATT | + |
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Preference number: 6 (lower is better) Translates to: ICFHSTVYYKCL*TWLEHTALDNI Trigger: AATGTTGTCAAGGGCTGTGTGTTCCAGCCAGGTTCAAAGACATTTATAGTAGACAGTAGAATGGAAGCAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS TCA 72 bp | TATCTGTATCTAACATTTTTGAACTTGTTTGTAGCTTaGCCTGTTTCACAGTCTGTAGCTAAAAACTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: YLYLTFLNLFVA*PVSQSVAKNSP Trigger: GGGAGAGTTTTTAGCTACAGACTGTGAAACAGGTCAAGCTACAAACAAGTTCAAAAATGTTAGATACAGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS TCA 72 bp | GATCAAAGTTACTGTGAGTCTATATTGAGAAATAATTaGCTGGTGGAATTCAGCTACATTTCGAACACCAAT | + |
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Preference number: 6 (lower is better) Translates to: DQSYCESILRNN*LVEFSYISNTN Trigger: ATTGGTGTTCGAAATGTAGCTGAATTCCACCAGTCAATTATTTCTCAATATAGACTCACAGTAACTTTGATC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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| CDS TCA 72 bp | ACAGTCACAGTGATCAAAGTTACTGTGAGTCTATATTaGGAAATAATTGACTGGTGGAATTCAGCTACATTT | + |
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Preference number: 6 (lower is better) Translates to: TVTVIKVTVSLY*EIIDWWNSATF Trigger: AAATGTAGCTGAATTCCACCAGTCAATTATTTCTCAATATAGACTCACAGTAACTTTGATCACTGTGACTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054128.7 |
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