Pregenerated sensors for DSG1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069441Ensembl transcript IDs: ENSMUST00000077146.4
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATaGAACACAGTGGGAGCCAGGAAAGTTCCCAACTCCACAGGGGAC | + |
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Preference number: 1 (lower is better) Translates to: ALHPPSKQYSSESHP*NTVGARKVPNSTGD Trigger: GTCCCCTGTGGAGTTGGGAACTTTCCTGGCTCCCACTGTGTTTCATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR GCA 90 bp | GGAGGAGATTTAACACTTGGGAGGGCAGCCATGTCATGTGTCATTTaGAACTCTCCCTTCAACTACAGTGGTAAAGGCAAAAATGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: GGDLTLGRAAMSCVI*NSPFNYSGKGKNEH Trigger: ATGCTCATTTTTGCCTTTACCACTGTAGTTGAAGGGAGAGTTGCAAATGACACATGACATGGCTGCCCTCCCAAGTGTTAAATCTCCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR CCA 90 bp | AGAGATAATACTGTCCTGTCTGTACTTGGGAGGAGATTTAACACTTaGGAGGGCAGCCATGTCATGTGTCATTTGCAACTCTCCCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: RDNTVLSVLGRRFNT*EGSHVMCHLQLSLQ Trigger: TTGAAGGGAGAGTTGCAAATGACACATGACATGGCTGCCCTCCCAAGTGTTAAATCTCCTCCCAAGTACAGACAGGACAGTATTATCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGGGGCTTTAAACCAGGGAACACCTCAGAGTCACACCCATaGAACACAGTGGGAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PVSSKALILLRGFKPGNTSESHP*NTVGAR Trigger: CCTGGCTCCCACTGTGTTTCATGGGTGTGACTCTGA...GGTGTTCCCTGGTTTAAAGCCCCTCAGAAGAATCAAAGCTTTTGAGGACACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR CCA 90 bp | TACAGTGGTAAAGGCAAAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAAGGGTTACTATCACTGTaGCTCTTTCTTACTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: YSGKGKNEHGALHPPSKQGLLSL*LFLTPQ Trigger: CTGTGGAGTAAGAAAGAGCCACAGTGATAGTAACCC...TTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTTTGCCTTTACCACTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR CCA 90 bp | GTCATTTGCAACTCTCCCTTCAACTACAGTGGTAAAGGCAAAAATGAGCATGGTACCCATGAAACACAGTaGGAGCCAGGAAAGTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: VICNSPFNYSGKGKNEHGTHETQ*EPGKFP Trigger: TGGGAACTTTCCTGGCTCCCACTGTGTTTCATGGGT...ACCATGCTCATTTTTGCCTTTACCACTGTAGTTGAAGGGAGAGTTGCAAATGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR TCA 90 bp | GGCAAAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTTGGATGTAAGTCACTaGGATGGTGGTGAACAATAC | + |
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Preference number: 2 (lower is better) Translates to: GKNEHGALHPPSKQYSSELDVSH*DGGEQY Trigger: GTATTGTTCACCACCATCTCAGTGACTTACATCCAA...CTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR TCA 90 bp | AGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATTCAGTTTGTGCCAAATaGGTCTCGCAATATTGTTAC | + |
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Preference number: 2 (lower is better) Translates to: SMVPFIHPVSNILQSHTHSVCAK*VSQYCY Trigger: GTAACAATATTGCGAGACTCATTTGGCACAAACTGA...ATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR GCA 90 bp | AGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATTTCAGTGTCAGTTTGTaGCAAATGAGTCTCGCAATA | + |
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Preference number: 2 (lower is better) Translates to: SMVPFIHPVSNILQSHTHFSVSL*QMSLAI Trigger: TATTGCGAGACTCATTTGGCACAAACTGACACTGAA...ATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR TCA 90 bp | TTACCCTGCAATAGTAAGTGCACCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGTATTCAACATGCTGCTaGTACCCTACAGGGCAACAT | + |
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Preference number: 2 (lower is better) Translates to: LPCNSKCTCVLKSFDSSEYSTCC*YPTGQH Trigger: ATGTTGCCCTGTAGGGTATCAGCAGCATGTTGAATA...CTCAGAAGAATCAAAGCTTTTGAGGACACAGGTGCACTTACTATTGCAGGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR TCA 90 bp | AAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACAATTTGTATTCCCTGTaGAACAGACAGGGCATATGG | + |
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Preference number: 2 (lower is better) Translates to: KMSMVPFIHPVSNILQSHNLYSL*NRQGIW Trigger: CCATATGCCCTGTCTGTTTCACAGGGAATACAAATT...GTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR GCA 90 bp | AGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATCTCTGTATCATAAATTaGACTGTTAGATTTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: SMVPFIHPVSNILQSHTHLCIIN*TVRFGG Trigger: GCCTCCAAATCTAACAGTGCAATTTATGATACAGAG...ATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGGGGCTTTAAACCAGGGAACACCTTAACTATGCATTTATaGCCTAAAGAGCTGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: PVSSKALILLRGFKPGNTLTMHL*PKELHR Trigger: TCTGTGCAGCTCTTTAGGGCATAAATGCATAGTTAA...GGTGTTCCCTGGTTTAAAGCCCCTCAGAAGAATCAAAGCTTTTGAGGACACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR TCA 90 bp | AAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACTTTTCCTCACCTATGTaGGCTCAAGCTACATATTCA | + |
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Preference number: 2 (lower is better) Translates to: KMSMVPFIHPVSNILQSHFSSPM*AQATYS Trigger: TGAATATGTAGCTTGAGCTCACATAGGTGAGGAAAA...GTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR TCA 90 bp | TTACCCTGCAATAGTAAGTGCACCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGTCACTGAGATGGTGGTaGACAATACTCTGTAATCAT | + |
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Preference number: 2 (lower is better) Translates to: LPCNSKCTCVLKSFDSSESLRWW*TILCNH Trigger: ATGATTACAGAGTATTGTTCACCACCATCTCAGTGA...CTCAGAAGAATCAAAGCTTTTGAGGACACAGGTGCACTTACTATTGCAGGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR GCA 90 bp | GTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATGAAACAAAGAATTCTTCTCATTaGCATTTAAAGCCAGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: VPFIHPVSNILQSHTHETKNSSH*HLKPVL Trigger: AAGCACTGGCTTTAAATGGCAATGAGAAGAATTCTT...TGTTTCATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR CCA 90 bp | TTACCCTGCAATAGTAAGTGCACCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGTTAATCACTTCCAAATaGCAGCAGAGGGTCATTCAA | + |
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Preference number: 2 (lower is better) Translates to: LPCNSKCTCVLKSFDSSELITSK*QQRVIQ Trigger: TTGAATGACCCTCTGCTGCCATTTGGAAGTGATTAA...CTCAGAAGAATCAAAGCTTTTGAGGACACAGGTGCACTTACTATTGCAGGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR TCA 72 bp | CCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATaGAACACAGTGGGAGCCAGGAAAGTTCCCAACTCC | + |
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Preference number: 3 (lower is better) Translates to: PPSKQYSSESHP*NTVGARKVPNS Trigger: GGAGTTGGGAACTTTCCTGGCTCCCACTGTGTTTCATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR CCA 72 bp | AGCAATATTCTTCAGAGTCACACCCATGAAACACAGTaGGAGCCAGGAAAGTTCCCAACTCCACAGGGGACT | + |
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Preference number: 3 (lower is better) Translates to: SNILQSHTHETQ*EPGKFPTPQGT Trigger: AGTCCCCTGTGGAGTTGGGAACTTTCCTGGCTCCCACTGTGTTTCATGGGTGTGACTCTGAAGAATATTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR CCA 72 bp | ACTGTCCTGTCTGTACTTGGGAGGAGATTTAACACTTaGGAGGGCAGCCATGTCATGTGTCATTTGCAACTC | + |
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Preference number: 3 (lower is better) Translates to: TVLSVLGRRFNT*EGSHVMCHLQL Trigger: GAGTTGCAAATGACACATGACATGGCTGCCCTCCCAAGTGTTAAATCTCCTCCCAAGTACAGACAGGACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR CAA 90 bp | AGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATAGATTCAGTGTCAGTTaGTGCCAAATGAGTCTCGCA | + |
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Preference number: 3 (lower is better) Translates to: SMVPFIHPVSNILQSHTHRFSVS*CQMSLA Trigger: TGCGAGACTCATTTGGCACAAACTGACACTGAATCT...ATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR TCA 72 bp | AAGTTTACCAATGCTAGGGAGCACTCTTCCCCATGGTaGTGTTTCCATGGGTTACTATCACTGTGGCTCTTT | + |
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Preference number: 3 (lower is better) Translates to: KFTNAREHSSPW*CFHGLLSLWLF Trigger: AAAGAGCCACAGTGATAGTAACCCATGGAAACATCACCATGGGGAAGAGTGCTCCCTAGCATTGGTAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR GCA 72 bp | TTAACACTTGGGAGGGCAGCCATGTCATGTGTCATTTaGAACTCTCCCTTCAACTACAGTGGTAAAGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: LTLGRAAMSCVI*NSPFNYSGKGK Trigger: TTTGCCTTTACCACTGTAGTTGAAGGGAGAGTTGCAAATGACACATGACATGGCTGCCCTCCCAAGTGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR TCA 72 bp | AGCTGCACAGAAACGAGTATGACTTACTGCTTAGACTaGAGAGATAATACTGTCCTGTCTGTACTTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SCTETSMTYCLD*RDNTVLSVLGR Trigger: CCTCCCAAGTACAGACAGGACAGTATTATCTCTTCAGTCTAAGCAGTAAGTCATACTCGTTTCTGTGCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR CAA 90 bp | GTCATTTGCAACTCTCCCTTCAACTACAGTGGTAAAGGCAAAAATGAGCATGGTATTGCACTGTTAGATTaGGAGGCAGGAGTTGGATGT | + |
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Preference number: 3 (lower is better) Translates to: VICNSPFNYSGKGKNEHGIALLD*EAGVGC Trigger: ACATCCAACTCCTGCCTCCAAATCTAACAGTGCAAT...ACCATGCTCATTTTTGCCTTTACCACTGTAGTTGAAGGGAGAGTTGCAAATGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR-3UTR CAA 90 bp | TTACCCTGCAATAGTAAGTGCACCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGCATGTCATGTGTCATTaGCAACTCTCCCTTCAACTA | + |
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Preference number: 3 (lower is better) Translates to: LPCNSKCTCVLKSFDSSEHVMCH*QLSLQL Trigger: TAGTTGAAGGGAGAGTTGCAAATGACACATGACATG...CTCAGAAGAATCAAAGCTTTTGAGGACACAGGTGCACTTACTATTGCAGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR GCA 72 bp | AAGCAAGAAAAGATTCCTTTACCCTGCAATAGTAAGTaGACCTGTGTCCTCAAAAGCTTTGATTCTTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: KQEKIPLPCNSK*TCVLKSFDSSE Trigger: CTCAGAAGAATCAAAGCTTTTGAGGACACAGGTGCACTTACTATTGCAGGGTAAAGGAATCTTTTCTTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR CCA 72 bp | AATTCTAGTAAAAGGTCCTGTTTAATCACTTCCAAATaGCAGCAGAGGGTCATTCAAATGATGACACTAATC | + |
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Preference number: 3 (lower is better) Translates to: NSSKRSCLITSK*QQRVIQMMTLI Trigger: GATTAGTGTCATCATTTGAATGACCCTCTGCTGCCATTTGGAAGTGATTAAACAGGACCTTTTACTAGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR TCA 72 bp | TTATTAAAGATTGCCATATTGCCACTTGTTAGGCAATaGAAAAATATTTGGGATTCATCAGGCATCGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: LLKIAILPLVRQ*KNIWDSSGIEA Trigger: TGCTTCGATGCCTGATGAATCCCAAATATTTTTTCATTGCCTAACAAGTGGCAATATGGCAATCTTTAATAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR GCA 90 bp | GTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATGAAACAACAGCCCACGGAGCCTaGAGGGGAACCCACACCTTC | + |
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Preference number: 4 (lower is better) Translates to: VPFIHPVSNILQSHTHETTAHGA*RGTHTF Trigger: GAAGGTGTGGGTTCCCCTGCAGGCTCCGTGGGCTGT...TGTTTCATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR CCA 90 bp | AGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATATGGGGTTCAGGCTGTaGCCCTTCTACAGCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: SMVPFIHPVSNILQSHTHMGFRL*PFYSPR Trigger: ACGTGGGCTGTAGAAGGGCCACAGCCTGAACCCCAT...ATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR CCA 90 bp | TACAGTGGTAAAGGCAAAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAAAATCAGCACCAGAGATaGGGCCCACCACCCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: YSGKGKNEHGALHPPSKQNQHQR*GPPPSL Trigger: CAGAGAGGGTGGTGGGCCCCATCTCTGGTGCTGATT...TTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTTTGCCTTTACCACTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR CCA 90 bp | GTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATGAAACAGACTTCGAGCCATGCTaGGGGAGGCAGATCCAACTG | + |
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Preference number: 4 (lower is better) Translates to: VPFIHPVSNILQSHTHETDFEPC*GRQIQL Trigger: CAGTTGGATCTGCCTCCCCCAGCATGGCTCGAAGTC...TGTTTCATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR CCA 90 bp | AGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATGAGGAGCTCCTCATGTaGCCAATAGTGGCTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SMVPFIHPVSNILQSHTHEELLM*PIVAVP Trigger: AGGAACAGCCACTATTGGCCACATGAGGAGCTCCTC...ATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR GCA 90 bp | GTCATTTGCAACTCTCCCTTCAACTACAGTGGTAAAGGCAAAAATGAGCATGGTCCATGTTCAGCCCAGTaGCAGAAGCACCCATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VICNSPFNYSGKGKNEHGPCSAQ*QKHPWW Trigger: CCACCATGGGTGCTTCTGGCACTGGGCTGAACATGG...ACCATGCTCATTTTTGCCTTTACCACTGTAGTTGAAGGGAGAGTTGCAAATGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR TCA 90 bp | AAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACATCGGTTCAGTGCTCTaGGGAGGCCAAGAAGGATCA | + |
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Preference number: 4 (lower is better) Translates to: KMSMVPFIHPVSNILQSHIGSVL*GGQEGS Trigger: TGATCCTTCTTGGCCTCCTCAGAGCACTGAACCGAT...GTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR GCA 90 bp | AGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATAGCCCACGTGTGAATTaGTCCATCAGAACATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SMVPFIHPVSNILQSHTHSPRVN*SIRTFW Trigger: CCAGAATGTTCTGATGGAGCAATTCACACGTGGGCT...ATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR TCA 90 bp | TACAGTGGTAAAGGCAAAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAACCGTATTGTACTTTGTaGTTCGACTTCGAGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: YSGKGKNEHGALHPPSKQPYCTL*FDFEPC Trigger: GCATGGCTCGAAGTCGAATCACAAAGTACAATACGG...TTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTTTGCCTTTACCACTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR GCA 90 bp | AGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATATCCATTCTCGTTTCTaGCTTCTGATGGAATGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SMVPFIHPVSNILQSHTHIHSRF*LLMECH Trigger: GTGGCATTCCATCAGAAGGCAGAAACGAGAATGGAT...ATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR GCA 90 bp | CCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGGGGCTTTAAACCAGGGAACACCCCTCCTCCCAGATCTTaGATTTCTCTGCCACAATAT | + |
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Preference number: 4 (lower is better) Translates to: PVSSKALILLRGFKPGNTPPPRS*ISLPQY Trigger: ATATTGTGGCAGAGAAATGCAAGATCTGGGAGGAGG...GGTGTTCCCTGGTTTAAAGCCCCTCAGAAGAATCAAAGCTTTTGAGGACACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR GCA 90 bp | AGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATAAATTACTGTGGTCGTaGCAAAATGTGGGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SMVPFIHPVSNILQSHTHKLLWS*QNVGRW Trigger: CCATCTCCCCACATTTTGGCACGACCACAGTAATTT...ATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR GCA 90 bp | AAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACCAGAGGGTTTCAGAGTaGCAGAGGTGGTATAGGACT | + |
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Preference number: 4 (lower is better) Translates to: KMSMVPFIHPVSNILQSHQRVSE*QRWYRT Trigger: AGTCCTATACCACCTCTGGCACTCTGAAACCCTCTG...GTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR GCA 90 bp | CCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGGGGCTTTAAACCAGGGAACACCCAGGTATCTCTAACATaGCATGCAAATCAGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: PVSSKALILLRGFKPGNTQVSLT*HANQHQ Trigger: CTGGTGCTGATTTGCATGGCATGTTAGAGATACCTG...GGTGTTCCCTGGTTTAAAGCCCCTCAGAAGAATCAAAGCTTTTGAGGACACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR CCA 90 bp | TACAGTGGTAAAGGCAAAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAATCATCAGGATCCCCTTaGAAAGGGTTAGTGTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: YSGKGKNEHGALHPPSKQSSGSP*KGLVLG Trigger: CCCTAACACTAACCCTTTCCAAGGGGATCCTGATGA...TTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTTTGCCTTTACCACTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR CCA 90 bp | TTACCCTGCAATAGTAAGTGCACCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGCAAAATGTGGGGAGATaGGTGGGTGTCCACTACCCA | + |
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Preference number: 4 (lower is better) Translates to: LPCNSKCTCVLKSFDSSEQNVGR*VGVHYP Trigger: TGGGTAGTGGACACCCACCCATCTCCCCACATTTTG...CTCAGAAGAATCAAAGCTTTTGAGGACACAGGTGCACTTACTATTGCAGGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS-3UTR CCA 90 bp | GTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATGAAACACAGAGGATCAGGAATTaGTACAGGATGCTGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: VPFIHPVSNILQSHTHETQRIRN*YRMLYS Trigger: GGAGTACAGCATCCTGTACCAATTCCTGATCCTCTG...TGTTTCATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| 3UTR CAA 72 bp | CCTGCAATAGTAAGTGCACCTGTGTCCTCAAAAGCTTaGATTCTTCTGAGGGGCTTTAAACCAGGGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: PAIVSAPVSSKA*ILLRGFKPGNT Trigger: GGTGTTCCCTGGTTTAAAGCCCCTCAGAAGAATCAAAGCTTTTGAGGACACAGGTGCACTTACTATTGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR TCA 90 bp | GTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATGAAACACGGTATGTCACTGGTTaGTTTGCAGCACAATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPFIHPVSNILQSHTHETRYVTG*FAAQSE Trigger: TTCAGATTGTGCTGCAAATCAACCAGTGACATACCG...TGTTTCATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR TCA 90 bp | CCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGGGGCTTTAAACCAGGGAACACCTGTGATGTCATAAGATaGCTGCTCCAAGTATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVSSKALILLRGFKPGNTCDVIR*LLQVWD Trigger: ATCCCATACTTGGAGCAGTCATCTTATGACATCACA...GGTGTTCCCTGGTTTAAAGCCCCTCAGAAGAATCAAAGCTTTTGAGGACACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR GCA 90 bp | AGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACACCCATCACAGTGACCATAGTTaGTGTGAGTCTGTATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMVPFIHPVSNILQSHTHHSDHS*CESVLR Trigger: TCTCAATACAGACTCACAGCAACTATGGTCACTGTG...ATGGGTGTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR GCA 90 bp | TACAGTGGTAAAGGCAAAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAATCAGATTGCCTATCATaGCAGAGGTTGGTTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: YSGKGKNEHGALHPPSKQSDCLS*QRLVGS Trigger: TGATCCAACCAACCTCTGGCATGATAGGCAATCTGA...TTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTTTGCCTTTACCACTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR TCA 90 bp | GTCATTTGCAACTCTCCCTTCAACTACAGTGGTAAAGGCAAAAATGAGCATGGTGTGGAAGAAGTGCCTTaGTATCCATTAGTCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VICNSPFNYSGKGKNEHGVEEVP*YPLVTR Trigger: CCGAGTGACTAATGGATATCAAGGCACTTCTTCCAC...ACCATGCTCATTTTTGCCTTTACCACTGTAGTTGAAGGGAGAGTTGCAAATGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR GCA 90 bp | TACAGTGGTAAAGGCAAAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAATGCCTTCTGATGGAATaGCACTTGATGGTACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: YSGKGKNEHGALHPPSKQCLLME*HLMVPF Trigger: AAATGGTACCATCAAGTGGCATTCCATCAGAAGGCA...TTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTTTGCCTTTACCACTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR GCA 90 bp | AAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACTCCCAGGCTGATATCTaGCAACTTCTTAAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KMSMVPFIHPVSNILQSHSQADI*QLLKLG Trigger: CCCAAGTTTAAGAAGTTGGCAGATATCAGCCTGGGA...GTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR CCA 90 bp | AAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGTCACGATGCGGTATGTCACTaGTTGATTTGCAGCACAATC | + |
|
Preference number: 4 (lower is better) Translates to: KMSMVPFIHPVSNILQSHDAVCH*LICSTI Trigger: GATTGTGCTGCAAATCAACCAGTGACATACCGCATC...GTGACTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR TCA 90 bp | CCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGGGGCTTTAAACCAGGGAACACCATTTGCAGCACAATCTaGATGAATTTTGGCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVSSKALILLRGFKPGNTICSTI*MNFGNW Trigger: CCAATTGCCAAAATTCATTCAGATTGTGCTGCAAAT...GGTGTTCCCTGGTTTAAAGCCCCTCAGAAGAATCAAAGCTTTTGAGGACACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR TCA 90 bp | TTACCCTGCAATAGTAAGTGCACCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGACATTTGAGGTCTCTTaGGGGTTAGGAATGGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPCNSKCTCVLKSFDSSETFEVS*GLGMVR Trigger: TCTAACCATTCCTAACCCTCAAGAGACCTCAAATGT...CTCAGAAGAATCAAAGCTTTTGAGGACACAGGTGCACTTACTATTGCAGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR GCA 90 bp | TTACCCTGCAATAGTAAGTGCACCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGTCCCACTCTGTGATTTaGTTCCATTCTACTGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPCNSKCTCVLKSFDSSESHSVI*FHSTVY Trigger: GTAGACAGTAGAATGGAAGCAAATCACAGAGTGGGA...CTCAGAAGAATCAAAGCTTTTGAGGACACAGGTGCACTTACTATTGCAGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR GCA 90 bp | GTCATTTGCAACTCTCCCTTCAACTACAGTGGTAAAGGCAAAAATGAGCATGGTATCTCTAACATGCCATaGAAATCAGCACCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VICNSPFNYSGKGKNEHGISNMP*KSAPEM Trigger: CATCTCTGGTGCTGATTTGCATGGCATGTTAGAGAT...ACCATGCTCATTTTTGCCTTTACCACTGTAGTTGAAGGGAGAGTTGCAAATGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR CCA 90 bp | GTCATTTGCAACTCTCCCTTCAACTACAGTGGTAAAGGCAAAAATGAGCATGGTTTTCAGAAATTACTGTaGTCGTGCCAAAATGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VICNSPFNYSGKGKNEHGFQKLL*SCQNVG Trigger: CCCCACATTTTGGCACGACCACAGTAATTTCTGAAA...ACCATGCTCATTTTTGCCTTTACCACTGTAGTTGAAGGGAGAGTTGCAAATGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| 3UTR CAA 72 bp | TTCAGTGTCAGTTTGTGCCAAATGAGTCTCGCAATATaGTTACTGTCTATGGACTTTTCTAACAGGACATAT | + |
|
Preference number: 4 (lower is better) Translates to: FSVSLCQMSLAI*LLSMDFSNRTY Trigger: ATATGTCCTGTTAGAAAAGTCCATAGACAGTAACAATATTGCGAGACTCATTTGGCACAAACTGACACTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS GCA 90 bp | GTCCACTACCCAGGGGCTCTGTATGCTGGGGACACATCGGTTCAGTaGTCTGAGGAGGCCAAGAAGGATCAGAATCTGGGTATGAGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: VHYPGALYAGDTSVQ*SEEAKKDQNLGMSL Trigger: TAGACTCATACCCAGATTCTGATCCTTCTTGGCCTCCTCAGAGCACTGAACCGATGTGTCCCCAGCATACAGAGCCCCTGGGTAGTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS TCA 90 bp | CTACCCAGGGGCTCTGTATGCTGGGGACACATCGGTTCAGTGCTCTaGGGAGGCCAAGAAGGATCAGAATCTGGGTATGAGTCTATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPRGSVCWGHIGSVL*GGQEGSESGYESIS Trigger: AGAAATAGACTCATACCCAGATTCTGATCCTTCTTGGCCTCCTCAGAGCACTGAACCGATGTGTCCCCAGCATACAGAGCCCCTGGGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS TCA 90 bp | AGCACCAGAGATGGGGCCCACCACCCTCTCTGTCACCACCACATTTaGAGCCTGCTGATTATCATGAAAGTGGACAGAGGGTTTCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: STRDGAHHPLCHHHI*SLLIIMKVDRGFQS Trigger: ACTCTGAAACCCTCTGTCCACTTTCATGATAATCAGCAGGCTTCAAATGTGGTGGTGACAGAGAGGGTGGTGGGCCCCATCTCTGGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CCA 90 bp | TTGTGGCACACAGATGGTGGTTATCCCTTCATGGGGTTCAGGCTGTaGCCCTTCTACAGCCCACGTGTGAATTGCTCCATCAGAACATTC | + |
|
Preference number: 5 (lower is better) Translates to: LWHTDGGYPFMGFRL*PFYSPRVNCSIRTF Trigger: GAATGTTCTGATGGAGCAATTCACACGTGGGCTGTAGAAGGGCCACAGCCTGAACCCCATGAAGGGATAACCACCATCTGTGTGCCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CCA 90 bp | GGACTCCCTCACAGTGACATTGCCATAGCCCAGAGGATCAGGAATTaGTACAGGATGCTGTACTCCAGGTCCAGAGTGGTAGGCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLPHSDIAIAQRIRN*YRMLYSRSRVVGIF Trigger: GAAAATGCCTACCACTCTGGACCTGGAGTACAGCATCCTGTACCAATTCCTGATCCTCTGGGCTATGGCAATGTCACTGTGAGGGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS GCA 90 bp | ATAACATTTGCTCCACCTCTTAAGTCAGGTATCTCTAACATGCCATaGAAATCAGCACCAGAGATGGGGCCCACCACCCTCTCTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: ITFAPPLKSGISNMP*KSAPEMGPTTLSVT Trigger: GGTGACAGAGAGGGTGGTGGGCCCCATCTCTGGTGCTGATTTGCATGGCATGTTAGAGATACCTGACTTAAGAGGTGGAGCAAATGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CCA 90 bp | CTCATACCAGCACCAGAAACCACTCTCTCTGTCACAATCACGTTGTaGGCACTTGATAATTCAGGGGTCATGCTCAGATTGCCTATCATG | + |
|
Preference number: 5 (lower is better) Translates to: LIPAPETTLSVTITL*ALDNSGVMLRLPIM Trigger: CATGATAGGCAATCTGAGCATGACCCCTGAATTATCAAGTGCCCACAACGTGATTGTGACAGAGAGAGTGGTTTCTGGTGCTGGTATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS GCA 90 bp | CAATCACGTTGTGGGCACTTGATAATTCAGGGGTCATGCTCAGATTaGCTATCATGCCAGAGGTTGGTTGGATCACTCTTTCTGTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: QSRCGHLIIQGSCSD*LSCQRLVGSLFLSQ Trigger: TTGTGACAGAAAGAGTGATCCAACCAACCTCTGGCATGATAGGCAATCTGAGCATGACCCCTGAATTATCAAGTGCCCACAACGTGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS GCA 90 bp | TCTCTGTCACAATCACGTTGTGGGCACTTGATAATTCAGGGGTCATaGTCAGATTGCCTATCATGCCAGAGGTTGGTTGGATCACTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLSQSRCGHLIIQGS*SDCLSCQRLVGSLF Trigger: AAAGAGTGATCCAACCAACCTCTGGCATGATAGGCAATCTGAGCATGACCCCTGAATTATCAAGTGCCCACAACGTGATTGTGACAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS TCA 90 bp | CGGTTCAGTGCTCTGAGGAGGCCAAGAAGGATCAGAATCTGGGTATaGGTCTATTTCTTTTCCCAGGCTGATATCTGCCAACTTCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: RFSALRRPRRIRIWV*VYFFSQADICQLLK Trigger: TTTAAGAAGTTGGCAGATATCAGCCTGGGAAAAGAAATAGACTCATACCCAGATTCTGATCCTTCTTGGCCTCCTCAGAGCACTGAACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS GCA 90 bp | TGTGGGCACTTGATAATTCAGGGGTCATGCTCAGATTGCCTATCATaGCAGAGGTTGGTTGGATCACTCTTTCTGTCACAACTACATTTG | + |
|
Preference number: 5 (lower is better) Translates to: CGHLIIQGSCSDCLS*QRLVGSLFLSQLHL Trigger: CAAATGTAGTTGTGACAGAAAGAGTGATCCAACCAACCTCTGGCATGATAGGCAATCTGAGCATGACCCCTGAATTATCAAGTGCCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CCA 90 bp | GTTGTCAATATATTCTATAACATTGGCATTACCAGGTGGCATTTGTaGCACACAGATGGTGGTTATCCCTTCATGGGGTTCAGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVNIFYNIGITRWHL*HTDGGYPFMGFRLW Trigger: CCACAGCCTGAACCCCATGAAGGGATAACCACCATCTGTGTGCCACAAATGCCACCTGGTAATGCCAATGTTATAGAATATATTGACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR CAA 90 bp | GGCAAAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGCTGTCACCACCACATTaGAAGCCTGCTGATTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: GKNEHGALHPPSKQYSSELSPPH*KPADYH Trigger: ATGATAATCAGCAGGCTTCAAATGTGGTGGTGACAG...CTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTTTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR CAA 90 bp | GTCATTTGCAACTCTCCCTTCAACTACAGTGGTAAAGGCAAAAATGAGCATGGTTCACGTTGTGGGCACTaGATAATTCAGGGGTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: VICNSPFNYSGKGKNEHGSRCGH*IIQGSC Trigger: GCATGACCCCTGAATTATCAAGTGCCCACAACGTGA...ACCATGCTCATTTTTGCCTTTACCACTGTAGTTGAAGGGAGAGTTGCAAATGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR CAA 90 bp | GGCAAAAATGAGCATGGTGCCCTTCATCCACCCAGTAAGCAATATTCTTCAGAGATGTCACTGGTTGATTaGCAGCACAATCTGAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: GKNEHGALHPPSKQYSSEMSLVD*QHNLNE Trigger: TTCATTCAGATTGTGCTGCAAATCAACCAGTGACAT...CTCTGAAGAATATTGCTTACTGGGTGGATGAAGGGCACCATGCTCATTTTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR CAA 90 bp | GTCATTTGCAACTCTCCCTTCAACTACAGTGGTAAAGGCAAAAATGAGCATGGTGAAAACACAGGAGGGTaGTCATTTATATCCATCACT | + |
|
Preference number: 5 (lower is better) Translates to: VICNSPFNYSGKGKNEHGENTGG*SFISIT Trigger: AGTGATGGATATAAATGACAACCCTCCTGTGTTTTC...ACCATGCTCATTTTTGCCTTTACCACTGTAGTTGAAGGGAGAGTTGCAAATGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS-3UTR CAA 90 bp | TTACCCTGCAATAGTAAGTGCACCTGTGTCCTCAAAAGCTTTGATTCTTCTGAGCTATACTGTACCGTATaGTACTTTGTGATTCGACTT | + |
|
Preference number: 5 (lower is better) Translates to: LPCNSKCTCVLKSFDSSELYCTV*YFVIRL Trigger: AAGTCGAATCACAAAGTACAATACGGTACAGTATAG...CTCAGAAGAATCAAAGCTTTTGAGGACACAGGTGCACTTACTATTGCAGGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS GCA 72 bp | TCACTCGGTCACGATCATCGCCACTGCCACTGGAACTaGCACCACTTTCTGAACCAGTTACCCAGCCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLGHDHRHCHWN*HHFLNQLPSQC Trigger: GCACTGGCTGGGTAACTGGTTCAGAAAGTGGTGGCAGTTCCAGTGGCAGTGGCGATGATCGTGACCGAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS GCA 72 bp | CCAGGGGCTCTGTATGCTGGGGACACATCGGTTCAGTaGTCTGAGGAGGCCAAGAAGGATCAGAATCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGALYAGDTSVQ*SEEAKKDQNLG Trigger: ACCCAGATTCTGATCCTTCTTGGCCTCCTCAGAGCACTGAACCGATGTGTCCCCAGCATACAGAGCCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CCA 72 bp | GGCATTTGTGGCACACAGATGGTGGTTATCCCTTCATaGGGTTCAGGCTGTGGCCCTTCTACAGCCCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: GICGTQMVVIPS*GSGCGPSTAHV Trigger: CACGTGGGCTGTAGAAGGGCCACAGCCTGAACCCCATGAAGGGATAACCACCATCTGTGTGCCACAAATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS TCA 72 bp | GGCTCTGTATGCTGGGGACACATCGGTTCAGTGCTCTaGGGAGGCCAAGAAGGATCAGAATCTGGGTATGAG | + |
|
Preference number: 6 (lower is better) Translates to: GSVCWGHIGSVL*GGQEGSESGYE Trigger: CTCATACCCAGATTCTGATCCTTCTTGGCCTCCTCAGAGCACTGAACCGATGTGTCCCCAGCATACAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CCA 72 bp | ACAGATGGTGGTTATCCCTTCATGGGGTTCAGGCTGTaGCCCTTCTACAGCCCACGTGTGAATTGCTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: TDGGYPFMGFRL*PFYSPRVNCSI Trigger: GATGGAGCAATTCACACGTGGGCTGTAGAAGGGCCACAGCCTGAACCCCATGAAGGGATAACCACCATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CCA 72 bp | TGGCATTACCAGGTGGCATTTGTGGCACACAGATGGTaGTTATCCCTTCATGGGGTTCAGGCTGTGGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: WHYQVAFVAHRW*LSLHGVQAVAL Trigger: AAGGGCCACAGCCTGAACCCCATGAAGGGATAACCACCATCTGTGTGCCACAAATGCCACCTGGTAATGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CCA 72 bp | CATTGGCATTACCAGGTGGCATTTGTGGCACACAGATaGTGGTTATCCCTTCATGGGGTTCAGGCTGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HWHYQVAFVAHR*WLSLHGVQAVA Trigger: GGCCACAGCCTGAACCCCATGAAGGGATAACCACCATCTGTGTGCCACAAATGCCACCTGGTAATGCCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CAA 90 bp | CAGCACCAGAGATGGGGCCCACCACCCTCTCTGTCACCACCACATTaGAAGCCTGCTGATTATCATGAAAGTGGACAGAGGGTTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QHQRWGPPPSLSPPH*KPADYHESGQRVSE Trigger: CTCTGAAACCCTCTGTCCACTTTCATGATAATCAGCAGGCTTCAAATGTGGTGGTGACAGAGAGGGTGGTGGGCCCCATCTCTGGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CCA 72 bp | CACAGTGACATTGCCATAGCCCAGAGGATCAGGAATTaGTACAGGATGCTGTACTCCAGGTCCAGAGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: HSDIAIAQRIRN*YRMLYSRSRVV Trigger: TACCACTCTGGACCTGGAGTACAGCATCCTGTACCAATTCCTGATCCTCTGGGCTATGGCAATGTCACTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CAA 90 bp | CAGCACCAGAAACCACTCTCTCTGTCACAATCACGTTGTGGGCACTaGATAATTCAGGGGTCATGCTCAGATTGCCTATCATGCCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QHQKPLSLSQSRCGH*IIQGSCSDCLSCQR Trigger: CCTCTGGCATGATAGGCAATCTGAGCATGACCCCTGAATTATCAAGTGCCCACAACGTGATTGTGACAGAGAGAGTGGTTTCTGGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS GCA 72 bp | TTCAGGCTGTGGCCCTTCTACAGCCCACGTGTGAATTaGTCCATCAGAACATTCTGGAACAGGTTCAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: FRLWPFYSPRVN*SIRTFWNRFKS Trigger: GGATTTGAACCTGTTCCAGAATGTTCTGATGGAGCAATTCACACGTGGGCTGTAGAAGGGCCACAGCCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS GCA 72 bp | CATTTGCTCCACCTCTTAAGTCAGGTATCTCTAACATaGCATGCAAATCAGCACCAGAGATGGGGCCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: HLLHLLSQVSLT*HANQHQRWGPP Trigger: TGGTGGGCCCCATCTCTGGTGCTGATTTGCATGGCATGTTAGAGATACCTGACTTAAGAGGTGGAGCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CCA 72 bp | GCACCAGAAACCACTCTCTCTGTCACAATCACGTTGTaGGCACTTGATAATTCAGGGGTCATGCTCAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: APETTLSVTITL*ALDNSGVMLRL Trigger: CAATCTGAGCATGACCCCTGAATTATCAAGTGCCCACAACGTGATTGTGACAGAGAGAGTGGTTTCTGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CAA 90 bp | TCACTCATACCAGCACCAGAAACCACTCTCTCTGTCACAATCACGTaGTGGGCACTTGATAATTCAGGGGTCATGCTCAGATTGCCTATC | + |
|
Preference number: 6 (lower is better) Translates to: SLIPAPETTLSVTIT*WALDNSGVMLRLPI Trigger: GATAGGCAATCTGAGCATGACCCCTGAATTATCAAGTGCCCACAACGTGATTGTGACAGAGAGAGTGGTTTCTGGTGCTGGTATGAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS CAA 90 bp | ACAATCACGTTGTGGGCACTTGATAATTCAGGGGTCATGCTCAGATaGCCTATCATGCCAGAGGTTGGTTGGATCACTCTTTCTGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: TITLWALDNSGVMLR*PIMPEVGWITLSVT Trigger: TGTGACAGAAAGAGTGATCCAACCAACCTCTGGCATGATAGGCAATCTGAGCATGACCCCTGAATTATCAAGTGCCCACAACGTGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
||
| CDS TCA 72 bp | GCTCTGAGGAGGCCAAGAAGGATCAGAATCTGGGTATaGGTCTATTTCTTTTCCCAGGCTGATATCTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: ALRRPRRIRIWV*VYFFSQADICQ Trigger: TTGGCAGATATCAGCCTGGGAAAAGAAATAGACTCATACCCAGATTCTGATCCTTCTTGGCCTCCTCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS CCA 72 bp | CCGTCCCGGTCTGAGCCTCTCACCACAAGGGAATACTaGCTATATTGCTCTCTGTCTAGAAAGTTATTCATT | + |
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Preference number: 6 (lower is better) Translates to: PSRSEPLTTREY*LYCSLSRKLFI Trigger: AATGAATAACTTTCTAGACAGAGAGCAATATAGCCAGTATTCCCTTGTGGTGAGAGGCTCAGACCGGGACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS CAA 72 bp | CAGGGGTCATGCTCAGATTGCCTATCATGCCAGAGGTaGGTTGGATCACTCTTTCTGTCACAACTACATTTG | + |
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Preference number: 6 (lower is better) Translates to: QGSCSDCLSCQR*VGSLFLSQLHL Trigger: CAAATGTAGTTGTGACAGAAAGAGTGATCCAACCAACCTCTGGCATGATAGGCAATCTGAGCATGACCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS CAA 72 bp | AAACCACTCTCTCTGTCACAATCACGTTGTGGGCACTaGATAATTCAGGGGTCATGCTCAGATTGCCTATCA | + |
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Preference number: 6 (lower is better) Translates to: KPLSLSQSRCGH*IIQGSCSDCLS Trigger: TGATAGGCAATCTGAGCATGACCCCTGAATTATCAAGTGCCCACAACGTGATTGTGACAGAGAGAGTGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS GCA 72 bp | TTGATAATTCAGGGGTCATGCTCAGATTGCCTATCATaGCAGAGGTTGGTTGGATCACTCTTTCTGTCACAA | + |
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Preference number: 6 (lower is better) Translates to: LIIQGSCSDCLS*QRLVGSLFLSQ Trigger: TTGTGACAGAAAGAGTGATCCAACCAACCTCTGGCATGATAGGCAATCTGAGCATGACCCCTGAATTATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS CCA 72 bp | ATATTCTATAACATTGGCATTACCAGGTGGCATTTGTaGCACACAGATGGTGGTTATCCCTTCATGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: IFYNIGITRWHL*HTDGGYPFMGF Trigger: GAACCCCATGAAGGGATAACCACCATCTGTGTGCCACAAATGCCACCTGGTAATGCCAATGTTATAGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS CAA 90 bp | TTGATAATTCAGGGGTCATGCTCAGATTGCCTATCATGCCAGAGGTaGGTTGGATCACTCTTTCTGTCACAACTACATTTGAGGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LIIQGSCSDCLSCQR*VGSLFLSQLHLRSL Trigger: AAGAGACCTCAAATGTAGTTGTGACAGAAAGAGTGATCCAACCAACCTCTGGCATGATAGGCAATCTGAGCATGACCCCTGAATTATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS CAA 72 bp | AATATATTCTATAACATTGGCATTACCAGGTGGCATTaGTGGCACACAGATGGTGGTTATCCCTTCATGGGG | + |
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Preference number: 6 (lower is better) Translates to: NIFYNIGITRWH*WHTDGGYPFMG Trigger: CCCCATGAAGGGATAACCACCATCTGTGTGCCACAAATGCCACCTGGTAATGCCAATGTTATAGAATATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS CAA 90 bp | TTGATGATGAACATTGGTGAGTCAGAAGGCTCCTGTCTTATGATCTaGAAGGCTATCATTGAGTTCAAGTTATTTGGCTCATCGGCATCG | + |
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Preference number: 6 (lower is better) Translates to: LMMNIGESEGSCLMI*KAIIEFKLFGSSAS Trigger: CGATGCCGATGAGCCAAATAACTTGAACTCAATGATAGCCTTCAAGATCATAAGACAGGAGCCTTCTGACTCACCAATGTTCATCATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS TCA 72 bp | GCACTAGCTGTGAGTGAAGTGCATTTTCTTCAATTGTaGTGTCATAAGATGACTGCTCCAAGTATGGGATGT | + |
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Preference number: 6 (lower is better) Translates to: ALAVSEVHFLQL*CHKMTAPSMGC Trigger: ACATCCCATACTTGGAGCAGTCATCTTATGACATCACAATTGAAGAAAATGCACTTCACTCACAGCTAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS CCA 72 bp | GTTGTCAATATATTCTATAACATTGGCATTACCAGGTaGCATTTGTGGCACACAGATGGTGGTTATCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: VVNIFYNIGITR*HLWHTDGGYPF Trigger: GAAGGGATAACCACCATCTGTGTGCCACAAATGCCACCTGGTAATGCCAATGTTATAGAATATATTGACAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS TCA 72 bp | GACCATAGTTGCTGTGAGTCTGTATTGAGAAATAATTaGCTGGTGGAATTCAGCTACATTCCGAACACCAAT | + |
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Preference number: 6 (lower is better) Translates to: DHSCCESVLRNN*LVEFSYIPNTN Trigger: ATTGGTGTTCGGAATGTAGCTGAATTCCACCAGTCAATTATTTCTCAATACAGACTCACAGCAACTATGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS TCA 72 bp | ACAGTCACAGTGACCATAGTTGCTGTGAGTCTGTATTaGGAAATAATTGACTGGTGGAATTCAGCTACATTC | + |
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Preference number: 6 (lower is better) Translates to: TVTVTIVAVSLY*EIIDWWNSATF Trigger: GAATGTAGCTGAATTCCACCAGTCAATTATTTCTCAATACAGACTCACAGCAACTATGGTCACTGTGACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS CAA 72 bp | AACATTGGTGAGTCAGAAGGCTCCTGTCTTATGATCTaGAAGGCTATCATTGAGTTCAAGTTATTTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: NIGESEGSCLMI*KAIIEFKLFGS Trigger: TGAGCCAAATAACTTGAACTCAATGATAGCCTTCAAGATCATAAGACAGGAGCCTTCTGACTCACCAATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS CAA 90 bp | CTGTCTAGAAAGTTATTCATTGTTCTGATTTCTCCAGTTTTCCTGTaGATGATGAACATTGGTGAGTCAGAAGGCTCCTGTCTTATGATC | + |
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Preference number: 6 (lower is better) Translates to: LSRKLFIVLISPVFL*MMNIGESEGSCLMI Trigger: GATCATAAGACAGGAGCCTTCTGACTCACCAATGTTCATCATCAACAGGAAAACTGGAGAAATCAGAACAATGAATAACTTTCTAGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS TCA 72 bp | GTGAAGTGCATTTTCTTCAATTGTGATGTCATAAGATaGCTGCTCCAAGTATGGGATGTTGTCATTGACATC | + |
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Preference number: 6 (lower is better) Translates to: VKCIFFNCDVIR*LLQVWDVVIDI Trigger: GATGTCAATGACAACATCCCATACTTGGAGCAGTCATCTTATGACATCACAATTGAAGAAAATGCACTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS CAA 72 bp | GAGTTCAAGTTATTTGGCTCATCGGCATCGGTAGCATaGAGTTTCATTACCAGTGTGTTTGCATTAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: EFKLFGSSASVA*SFITSVFALEF Trigger: AAATTCTAATGCAAACACACTGGTAATGAAACTCAATGCTACCGATGCCGATGAGCCAAATAACTTGAACTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS CAA 90 bp | GCTATCATTGAGTTCAAGTTATTTGGCTCATCGGCATCGGTAGCATaGAGTTTCATTACCAGTGTGTTTGCATTAGAATTTTCTTCTATT | + |
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Preference number: 6 (lower is better) Translates to: AIIEFKLFGSSASVA*SFITSVFALEFSSI Trigger: AATAGAAGAAAATTCTAATGCAAACACACTGGTAATGAAACTCAATGCTACCGATGCCGATGAGCCAAATAACTTGAACTCAATGATAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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| CDS CCA 72 bp | GATAGCACTGTTCCTTTATATTCCCCATTAAGCCTTTaGTATTGTTCCATAGTAACTCTGTTTCTTAACGTT | + |
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Preference number: 6 (lower is better) Translates to: DSTVPLYSPLSL*YCSIVTLFLNV Trigger: AACGTTAAGAAACAGAGTTACTATGGAACAATACCAAAGGCTTAATGGGGAATATAAAGGAACAGTGCTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077146.4 |
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