Pregenerated sensors for DRG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020537Ensembl transcript IDs: ENSMUST00000018568.4
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGTTCTGGGAGGGGCTCCAAGGGGGAGGCACTTTAGGACACTTTaGCTGGGCCCTGGCTTCCATGAGGGACAGCCCTGTGTTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: AVLGGAPRGRHFRTL*LGPGFHEGQPCVGR Trigger: CCTCCCAACACAGGGCTGTCCCTCATGGAAGCCAGGGCCCAGCCAAAGTGTCCTAAAGTGCCTCCCCCTTGGAGCCCCTCCCAGAACAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR GCA 90 bp | AGCTTAGGTCTGGCTGGGAGGATGTGGGTAACTAAGCTCCTTGAGTaGCCGGAAGGGGCACAGGGCATGGACACAGGCTGTAGGCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: SLGLAGRMWVTKLLE*PEGAQGMDTGCRLL Trigger: CAGCAGCCTACAGCCTGTGTCCATGCCCTGTGCCCCTTCCGGGCACTCAAGGAGCTTAGTTACCCACATCCTCCCAGCCAGACCTAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR TCA 90 bp | CCACTATGTGCTAGAGTTGTTCTCAGGAGCCTCAGGGACCCTACTTaGGCCAGGGTCAGCTTAGGTCTGGCTGGGAGGATGTGGGTAACT | + |
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Preference number: 1 (lower is better) Translates to: PLCARVVLRSLRDPT*ARVSLGLAGRMWVT Trigger: AGTTACCCACATCCTCCCAGCCAGACCTAAGCTGACCCTGGCTCAAGTAGGGTCCCTGAGGCTCCTGAGAACAACTCTAGCACATAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR CAA 90 bp | GGACACTTTGGCTGGGCCCTGGCTTCCATGAGGGACAGCCCTGTGTaGGGAGGACCTGTGGGAGGCTTCATCCTGAGGCCACTATGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GHFGWALASMRDSPV*GGPVGGFILRPLCA Trigger: AGCACATAGTGGCCTCAGGATGAAGCCTCCCACAGGTCCTCCCAACACAGGGCTGTCCCTCATGGAAGCCAGGGCCCAGCCAAAGTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR-3UTR TCA 90 bp | GAGGGCAGACATAGGAGCTTAGAAGGAAATGGAGCCAGACTCAGAGGTCCCACCGGGCCCTGGCTTCCATaGGGGACAGCCCTGTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: EGRHRSLEGNGARLRGPTGPWLP*GTALCW Trigger: CCAACACAGGGCTGTCCCTCATGGAAGCCAGGGCCC...GGTGGGACCTCTGAGTCTGGCTCCATTTCCTTCTAAGCTCCTATGTCTGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR-3UTR TCA 90 bp | GGCACTTTAGGACACTTTGGCTGGGCCCTGGCTTCCATGAGGGACAGCCCTGTGTGGGAGGCTTCATCCTaGGGCCACTATGTGCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: GTLGHFGWALASMRDSPVWEASS*GHYVLE Trigger: CTCTAGCACATAGTGGCCTCAGGATGAAGCCTCCCA...CACAGGGCTGTCCCTCATGGAAGCCAGGGCCCAGCCAAAGTGTCCTAAAGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR-3UTR CCA 90 bp | CACTTTAGGACACTTTGGCTGGGCCCTGGCTTCCATGAGGGACAGCCCTGTGTTAAGGGGCACAGGGCATaGACACAGGCTGTAGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: HFRTLWLGPGFHEGQPCVKGHRA*TQAVGC Trigger: GCAGCCTACAGCCTGTGTCCATGCCCTGTGCCCCTT...AACACAGGGCTGTCCCTCATGGAAGCCAGGGCCCAGCCAAAGTGTCCTAAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR-3UTR TCA 90 bp | AGGGTCAGCTTAGGTCTGGCTGGGAGGATGTGGGTAACTAAGCTCCTTGAGTGCCAGGCTGTAGGCTGCTaGGTAAGCCTGCCACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RVSLGLAGRMWVTKLLECQAVGC*VSLPQA Trigger: TGCCTGTGGCAGGCTTACTCAGCAGCCTACAGCCTG...GCACTCAAGGAGCTTAGTTACCCACATCCTCCCAGCCAGACCTAAGCTGACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCAGCTTAGGTCTGGCTGGGAGGATGTGGGTAACTAAGCTCCTTGAGTGCTCCTCAGCAAAGCCCTaGTCCCCAGCTTTGCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: RVSLGLAGRMWVTKLLECSSAKP*SPALPS Trigger: GCTAGGCAAAGCTGGGGACCAGGGCTTTGCTGAGGA...GCACTCAAGGAGCTTAGTTACCCACATCCTCCCAGCCAGACCTAAGCTGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR-3UTR CCA 90 bp | CATAGGAGCTTAGAAGGAAATGGAGCCAGACTCAGAGGTCCCACCCAGGCAGGATCAAGAATCGCTTCCTaGGGTTTATGTTTGTACTTT | + |
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Preference number: 2 (lower is better) Translates to: HRSLEGNGARLRGPTQAGSRIAS*GLCLYF Trigger: AAAGTACAAACATAAACCCCAGGAAGCGATTCTTGA...TCCTGCCTGGGTGGGACCTCTGAGTCTGGCTCCATTTCCTTCTAAGCTCCTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR CCA 72 bp | GGAGGGGCTCCAAGGGGGAGGCACTTTAGGACACTTTaGCTGGGCCCTGGCTTCCATGAGGGACAGCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: GGAPRGRHFRTL*LGPGFHEGQPC Trigger: ACAGGGCTGTCCCTCATGGAAGCCAGGGCCCAGCCAAAGTGTCCTAAAGTGCCTCCCCCTTGGAGCCCCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR CCA 72 bp | GGGCTCCAAGGGGGAGGCACTTTAGGACACTTTGGCTaGGCCCTGGCTTCCATGAGGGACAGCCCTGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: GLQGGGTLGHFG*ALASMRDSPVL Trigger: CAACACAGGGCTGTCCCTCATGGAAGCCAGGGCCCAGCCAAAGTGTCCTAAAGTGCCTCCCCCTTGGAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR GCA 72 bp | CTGGCTGGGAGGATGTGGGTAACTAAGCTCCTTGAGTaGCCGGAAGGGGCACAGGGCATGGACACAGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: LAGRMWVTKLLE*PEGAQGMDTGC Trigger: ACAGCCTGTGTCCATGCCCTGTGCCCCTTCCGGGCACTCAAGGAGCTTAGTTACCCACATCCTCCCAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR TCA 72 bp | GCCCTGTGTTGGGAGGACCTGTGGGAGGCTTCATCCTaGGGCCACTATGTGCTAGAGTTGTTCTCAGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: ALCWEDLWEASS*GHYVLELFSGA Trigger: GGCTCCTGAGAACAACTCTAGCACATAGTGGCCTCAGGATGAAGCCTCCCACAGGTCCTCCCAACACAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR-3UTR CAA 90 bp | GGGGCACAGGGCATGGACACAGGCTGTAGGCTGCTGAGTAAGCCTGCCACAGGCTCCTGGGGTTTATGTTaGTACTTTTCCCGTTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GAQGMDTGCRLLSKPATGSWGLC*YFSRLC Trigger: ACACAAACGGGAAAAGTACAAACATAAACCCCAGGA...GCCTGTGGCAGGCTTACTCAGCAGCCTACAGCCTGTGTCCATGCCCTGTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CCA 90 bp | TGGCTGGGCCCTGGCTTCCATGAGGGACAGCCCTGTGTTGGGAGGACCTGTGGGGCTGTGGGCTGTACTTaGTGCTGGTACCCCACACCA | + |
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Preference number: 4 (lower is better) Translates to: WLGPGFHEGQPCVGRTCGAVGCT*CWYPTP Trigger: TGGTGTGGGGTACCAGCACCAAGTACAGCCCACAGC...CCCACAGGTCCTCCCAACACAGGGCTGTCCCTCATGGAAGCCAGGGCCCAGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CCA 90 bp | CAGCCCTGTGTTGGGAGGACCTGTGGGAGGCTTCATCCTGAGGCCACTATGTGCCTGGCCAGTGACCGATaGATGCGGTGGCACACGTGT | + |
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Preference number: 4 (lower is better) Translates to: QPCVGRTCGRLHPEATMCLASDR*MRWHTC Trigger: ACACGTGTGCCACCGCATCCATCGGTCACTGGCCAG...GCACATAGTGGCCTCAGGATGAAGCCTCCCACAGGTCCTCCCAACACAGGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CCA 90 bp | CAGGGACCCTACTTGAGCCAGGGTCAGCTTAGGTCTGGCTGGGAGGATGTGGGTCAGGCCTACCCGCTGTaGGCTGTACTTGGTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QGPYLSQGQLRSGWEDVGQAYPL*AVLGAG Trigger: ACCAGCACCAAGTACAGCCCACAGCGGGTAGGCCTG...ACCCACATCCTCCCAGCCAGACCTAAGCTGACCCTGGCTCAAGTAGGGTCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR TCA 90 bp | TTAGAAGGAAATGGAGCCAGACTCAGAGGTCCCACCCAGGCAGGAGGAGGCTGTGAACTGGCTGGCCAGTaGCCGATGGATGCGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LEGNGARLRGPTQAGGGCELAGQ*PMDAVA Trigger: TGCCACCGCATCCATCGGTCACTGGCCAGCCAGTTC...ACAGCCTCCTCCTGCCTGGGTGGGACCTCTGAGTCTGGCTCCATTTCCTTCTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR GCA 90 bp | CTAAGCTCCTTGAGTGCCCGGAAGGGGCACAGGGCATGGACACAGGCTGTAGGCACGGCCTCGGCCTTGTaGTGCTCCTTCAATGATTCC | + |
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Preference number: 4 (lower is better) Translates to: LSSLSARKGHRAWTQAVGTASAL*CSFNDS Trigger: GGAATCATTGAAGGAGCAGCACAAGGCCGAGGCCGT...GCCTACAGCCTGTGTCCATGCCCTGTGCCCCTTCCGGGCACTCAAGGAGCTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR GCA 90 bp | GGGAGGATGTGGGTAACTAAGCTCCTTGAGTGCCCGGAAGGGGCACAGGGCATGTCCAGCAGGGACCTCTaGACATCTCCCTTGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GRMWVTKLLECPEGAQGMSSRDL*TSPLVA Trigger: TGCCACCAAGGGAGATGTGCAGAGGTCCCTGCTGGA...CATGCCCTGTGCCCCTTCCGGGCACTCAAGGAGCTTAGTTACCCACATCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR GCA 90 bp | GGCCCTGGCTTCCATGAGGGACAGCCCTGTGTTGGGAGGACCTGTGGGAGGCTTTGGATGACGTCCTCATaGTCCATAGTGTGGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPGFHEGQPCVGRTCGRLWMTSS*SIVWVR Trigger: CCTGACCCACACTATGGAGCATGAGGACGTCATCCA...AAGCCTCCCACAGGTCCTCCCAACACAGGGCTGTCCCTCATGGAAGCCAGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR GCA 90 bp | TGGCTGGGCCCTGGCTTCCATGAGGGACAGCCCTGTGTTGGGAGGACCTGTGGGTCATGTAGGATGAGCTaGACCAGCTTCTCAGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: WLGPGFHEGQPCVGRTCGSCRMS*TSFSEH Trigger: ATGCTCTGAGAAGCTGGTGCAGCTCATCCTACATGA...CCCACAGGTCCTCCCAACACAGGGCTGTCCCTCATGGAAGCCAGGGCCCAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CCA 90 bp | CAGCCCTGTGTTGGGAGGACCTGTGGGAGGCTTCATCCTGAGGCCACTATGTGCTGGATGAGGCGGATTTaGATGGTTCCAGGAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QPCVGRTCGRLHPEATMCWMRRI*MVPGAG Trigger: CCCAGCTCCTGGAACCATCCAAATCCGCCTCATCCA...GCACATAGTGGCCTCAGGATGAAGCCTCCCACAGGTCCTCCCAACACAGGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR TCA 90 bp | TTAGAAGGAAATGGAGCCAGACTCAGAGGTCCCACCCAGGCAGGAGGAGGCTGTGCCCTCTCCTTTGGATaGGGCGGATTTGGATGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LEGNGARLRGPTQAGGGCALSFG*GGFGWF Trigger: GAACCATCCAAATCCGCCTCATCCAAAGGAGAGGGC...ACAGCCTCCTCCTGCCTGGGTGGGACCTCTGAGTCTGGCTCCATTTCCTTCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR TCA 90 bp | GGCACTTTAGGACACTTTGGCTGGGCCCTGGCTTCCATGAGGGACAGCCCTGTGGTGCTGCTCCTTCAATaGTTCCAGGAAGGTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: GTLGHFGWALASMRDSPVVLLLQ*FQEGPR Trigger: TCTTGGACCTTCCTGGAATCATTGAAGGAGCAGCAC...CACAGGGCTGTCCCTCATGGAAGCCAGGGCCCAGCCAAAGTGTCCTAAAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR GCA 90 bp | CAGGGACCCTACTTGAGCCAGGGTCAGCTTAGGTCTGGCTGGGAGGATGTGGGTATACTTGGCCAGTTTTaGTTTCAGCAGGCCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: QGPYLSQGQLRSGWEDVGILGQF*FQQAQV Trigger: CACCTGGGCCTGCTGAAAGCAAAACTGGCCAAGTAT...ACCCACATCCTCCCAGCCAGACCTAAGCTGACCCTGGCTCAAGTAGGGTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CCA 90 bp | CATAGGAGCTTAGAAGGAAATGGAGCCAGACTCAGAGGTCCCACCCAGGCAGGAGATGGTTCCAGGAGCTaGGCCCGATACTTGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: HRSLEGNGARLRGPTQAGDGSRS*ARYLAS Trigger: ACTGGCCAAGTATCGGGCCCAGCTCCTGGAACCATC...TCCTGCCTGGGTGGGACCTCTGAGTCTGGCTCCATTTCCTTCTAAGCTCCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR TCA 90 bp | CCTCAGGGACCCTACTTGAGCCAGGGTCAGCTTAGGTCTGGCTGGGAGGATGTGTGTCAGTGTGACTGTTaGGTTAAAGGAGATGCCACC | + |
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Preference number: 4 (lower is better) Translates to: PQGPYLSQGQLRSGWEDVCQCDC*VKGDAT Trigger: GGTGGCATCTCCTTTAACTCAACAGTCACACTGACA...CACATCCTCCCAGCCAGACCTAAGCTGACCCTGGCTCAAGTAGGGTCCCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR TCA 90 bp | CAGGGACCCTACTTGAGCCAGGGTCAGCTTAGGTCTGGCTGGGAGGATGTGGGTTGTATTCATGTAGGATaGGCTGCACCAGCTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QGPYLSQGQLRSGWEDVGCIHVG*AAPASQ Trigger: CTGAGAAGCTGGTGCAGCTCATCCTACATGAATACA...ACCCACATCCTCCCAGCCAGACCTAAGCTGACCCTGGCTCAAGTAGGGTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR GCA 90 bp | ATGTCCTCAGCAAAGCCCTGGTCCCCAGCTTTGCCTAGCCCAACACTGTTTCTGGCCTCGGCCTTGTGCTaGTCCTTCAATGATTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MSSAKPWSPALPSPTLFLASALC*SFNDSR Trigger: CCTGGAATCATTGAAGGAGCAGCACAAGGCCGAGGC...CAGAAACAGTGTTGGGCTAGGCAAAGCTGGGGACCAGGGCTTTGCTGAGGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CCA 90 bp | CATAGGAGCTTAGAAGGAAATGGAGCCAGACTCAGAGGTCCCACCCAGGCAGGATCATGCTCCATAGTGTaGGTCAGGCCTACCCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HRSLEGNGARLRGPTQAGSCSIV*VRPTRC Trigger: ACAGCGGGTAGGCCTGACCCACACTATGGAGCATGA...TCCTGCCTGGGTGGGACCTCTGAGTCTGGCTCCATTTCCTTCTAAGCTCCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR TCA 90 bp | AGTTGTTCTCAGGAGCCTCAGGGACCCTACTTGAGCCAGGGTCAGCTTAGGTCTCACACGGGCATCACCTaGCTTCATGACATCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SCSQEPQGPYLSQGQLRSHTGIT*LHDIKA Trigger: GGCTTTGATGTCATGAAGTCAGGTGATGCCCGTGTG...AGACCTAAGCTGACCCTGGCTCAAGTAGGGTCCCTGAGGCTCCTGAGAACAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CCA 90 bp | TTAGAAGGAAATGGAGCCAGACTCAGAGGTCCCACCCAGGCAGGAGGAGGCTGTCAAAGCCCTCTCCTTTaGATGAGGCGGATTTGGATG | + |
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Preference number: 4 (lower is better) Translates to: LEGNGARLRGPTQAGGGCQSPLL*MRRIWM Trigger: CATCCAAATCCGCCTCATCCAAAGGAGAGGGCTTTG...ACAGCCTCCTCCTGCCTGGGTGGGACCTCTGAGTCTGGCTCCATTTCCTTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| 3UTR CAA 72 bp | ATCGCTTCCTGGGGTTTATGTTTGTACTTTTCCCGTTaGTGTGTTCCAGGGAGGCCGAGTTCCCGGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: IASWGLCLYFSR*CVPGRPSSREP Trigger: TGGCTCCCGGGAACTCGGCCTCCCTGGAACACACAAACGGGAAAAGTACAAACATAAACCCCAGGAAGCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR TCA 90 bp | CAGCCCTGTGTTGGGAGGACCTGTGGGAGGCTTCATCCTGAGGCCACTATGTGCCACCTTTCTTGGGCTTaGAATAGATGTTGGGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: QPCVGRTCGRLHPEATMCHLSWA*NRCWAY Trigger: ATAAGCCCAACATCTATTTCAAGCCCAAGAAAGGTG...GCACATAGTGGCCTCAGGATGAAGCCTCCCACAGGTCCTCCCAACACAGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR TCA 90 bp | CATAGGAGCTTAGAAGGAAATGGAGCCAGACTCAGAGGTCCCACCCAGGCAGGACCACAATCACATCGATaGAGTCGTCTGGAGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: HRSLEGNGARLRGPTQAGPQSHR*SRLESS Trigger: ACTGCTCTCCAGACGACTTCATCGATGTGATTGTGG...TCCTGCCTGGGTGGGACCTCTGAGTCTGGCTCCATTTCCTTCTAAGCTCCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CCA 90 bp | CACAGGCTTTATAGGGAATGTCCTCAGCAAAGCCCTGGTCCCCAGCTTTGCCTAATCGATGAAGTCGTCTaGAGAGCAGTCTTCTCGGAA | + |
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Preference number: 4 (lower is better) Translates to: HRLYRECPQQSPGPQLCLIDEVV*RAVFSE Trigger: TTCCGAGAAGACTGCTCTCCAGACGACTTCATCGAT...TAGGCAAAGCTGGGGACCAGGGCTTTGCTGAGGACATTCCCTATAAAGCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CCA 90 bp | CAGGGACCCTACTTGAGCCAGGGTCAGCTTAGGTCTGGCTGGGAGGATGTGGGTTCTTCCATGGAGATCTaGTCGATTTTGTTATACACA | + |
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Preference number: 4 (lower is better) Translates to: QGPYLSQGQLRSGWEDVGSSMEI*SILLYT Trigger: TGTGTATAACAAAATCGACCAGATCTCCATGGAAGA...ACCCACATCCTCCCAGCCAGACCTAAGCTGACCCTGGCTCAAGTAGGGTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CCA 90 bp | ATGAATCAGCCACTCAAGAATCGCTTCCTGGGGTTTATGTTTGTACTTTTCCCGTTCAGCAGGCCCAGGTaGTACTCGGTGGCCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: MNQPLKNRFLGFMFVLFPFSRPR*YSVALF Trigger: GAACAAGGCCACCGAGTACCACCTGGGCCTGCTGAA...CGGGAAAAGTACAAACATAAACCCCAGGAAGCGATTCTTGAGTGGCTGATTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CCA 90 bp | CAGCCACTCAAGAATCGCTTCCTGGGGTTTATGTTTGTACTTTTCCCGTTTGTGAAGGCGTACTTGAACTaGCTGGCCAGTGACCGATGG | + |
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Preference number: 4 (lower is better) Translates to: QPLKNRFLGFMFVLFPFVKAYLN*LASDRW Trigger: CCATCGGTCACTGGCCAGCCAGTTCAAGTACGCCTT...CACAAACGGGAAAAGTACAAACATAAACCCCAGGAAGCGATTCTTGAGTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CCA 90 bp | ATGAATCAGCCACTCAAGAATCGCTTCCTGGGGTTTATGTTTGTACTTTTCCCGGGCTGTACTTGGTGCTaGTACCCCACACCAAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: MNQPLKNRFLGFMFVLFPGCTWC*YPTPRR Trigger: ACGCCTTGGTGTGGGGTACCAGCACCAAGTACAGCC...CGGGAAAAGTACAAACATAAACCCCAGGAAGCGATTCTTGAGTGGCTGATTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR TCA 90 bp | TTCCTGGGGTTTATGTTTGTACTTTTCCCGTTTGTGTGTTCCAGGGAGGCCGAGCATCACCTGACTTCATaGCATCAAAGCCCTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: FLGFMFVLFPFVCSREAEHHLTS*HQSPLL Trigger: AAGGAGAGGGCTTTGATGTCATGAAGTCAGGTGATG...CTCGGCCTCCCTGGAACACACAAACGGGAAAAGTACAAACATAAACCCCAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR GCA 90 bp | CAGCCACTCAAGAATCGCTTCCTGGGGTTTATGTTTGTACTTTTCCCGTTTGTGGTGGCCTTGTTCTTCTaGGTTCGAGCGATCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: QPLKNRFLGFMFVLFPFVVALFF*VRAISF Trigger: GAAGGAGATCGCTCGAACGCAGAAGAACAAGGCCAC...CACAAACGGGAAAAGTACAAACATAAACCCCAGGAAGCGATTCTTGAGTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS GCA 90 bp | TCCCTTGGTGGCATCCAGCATCATGACGACGACATCAGCTGTGCGTaGTACGGCAATCACCTGCCGGCCACGGCCTCGGCCTTGTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SLGGIQHHDDDISCA*YGNHLPATASALCC Trigger: GCAGCACAAGGCCGAGGCCGTGGCCGGCAGGTGATTGCCGTAGCACGCACAGCTGATGTCGTCGTCATGATGCTGGATGCCACCAAGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CAA 90 bp | ACACTTTGGCTGGGCCCTGGCTTCCATGAGGGACAGCCCTGTGTTGGGAGGACCGCCACGGCCTCGGCCTaGTGCTGCTCCTTCAATGAT | + |
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Preference number: 5 (lower is better) Translates to: TLWLGPGFHEGQPCVGRTATASA*CCSFND Trigger: ATCATTGAAGGAGCAGCACAAGGCCGAGGCCGTGGC...GGTCCTCCCAACACAGGGCTGTCCCTCATGGAAGCCAGGGCCCAGCCAAAGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS TCA 90 bp | CCAGCAGGGACCTCTGCACATCTCCCTTGGTGGCATCCAGCATCATaGCGACGACATCAGCTGTGCGTGCTACGGCAATCACCTGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: PAGTSAHLPWWHPAS*RRHQLCVLRQSPAG Trigger: GCCGGCAGGTGATTGCCGTAGCACGCACAGCTGATGTCGTCGTCATGATGCTGGATGCCACCAAGGGAGATGTGCAGAGGTCCCTGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS TCA 90 bp | GGTGCTGGTACCCCACACCAAGGCGTACTTGAACTGGCTGGCCAGTaGCCGATGGATGCGGTGGCACACGTGTTCAACAGAGGCCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: GAGTPHQGVLELAGQ*PMDAVAHVFNRGPF Trigger: AAAGGGGCCTCTGTTGAACACGTGTGCCACCGCATCCATCGGTCACTGGCCAGCCAGTTCAAGTACGCCTTGGTGTGGGGTACCAGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CCA 90 bp | TGGATGAGGCGGATTTGGATGGTTCCAGGAGCTGGGCCCGATACTTaGCCAGTTTTGCTTTCAGCAGGCCCAGGTGGTACTCGGTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: WMRRIWMVPGAGPDT*PVLLSAGPGGTRWP Trigger: AGGCCACCGAGTACCACCTGGGCCTGCTGAAAGCAAAACTGGCCAAGTATCGGGCCCAGCTCCTGGAACCATCCAAATCCGCCTCATCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CCA 90 bp | GGGCTGTACTTGGTGCTGGTACCCCACACCAAGGCGTACTTGAACTaGCTGGCCAGTGACCGATGGATGCGGTGGCACACGTGTTCAACA | + |
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Preference number: 5 (lower is better) Translates to: GLYLVLVPHTKAYLN*LASDRWMRWHTCST Trigger: TGTTGAACACGTGTGCCACCGCATCCATCGGTCACTGGCCAGCCAGTTCAAGTACGCCTTGGTGTGGGGTACCAGCACCAAGTACAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CCA 90 bp | AAGCCCTCTCCTTTGGATGAGGCGGATTTGGATGGTTCCAGGAGCTaGGCCCGATACTTGGCCAGTTTTGCTTTCAGCAGGCCCAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: KPSPLDEADLDGSRS*ARYLASFAFSRPRW Trigger: CCACCTGGGCCTGCTGAAAGCAAAACTGGCCAAGTATCGGGCCCAGCTCCTGGAACCATCCAAATCCGCCTCATCCAAAGGAGAGGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CCA 90 bp | GATGACGTCCTCATGCTCCATAGTGTGGGTCAGGCCTACCCGCTGTaGGCTGTACTTGGTGCTGGTACCCCACACCAAGGCGTACTTGAA | + |
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Preference number: 5 (lower is better) Translates to: DDVLMLHSVGQAYPL*AVLGAGTPHQGVLE Trigger: TTCAAGTACGCCTTGGTGTGGGGTACCAGCACCAAGTACAGCCCACAGCGGGTAGGCCTGACCCACACTATGGAGCATGAGGACGTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS GCA 90 bp | GGATTTGGATGGTTCCAGGAGCTGGGCCCGATACTTGGCCAGTTTTaGTTTCAGCAGGCCCAGGTGGTACTCGGTGGCCTTGTTCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: GFGWFQELGPILGQF*FQQAQVVLGGLVLL Trigger: CAGAAGAACAAGGCCACCGAGTACCACCTGGGCCTGCTGAAAGCAAAACTGGCCAAGTATCGGGCCCAGCTCCTGGAACCATCCAAATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CAA 90 bp | CATAGGAGCTTAGAAGGAAATGGAGCCAGACTCAGAGGTCCCACCCAGGCAGGATTGGATGAGGCGGATTaGGATGGTTCCAGGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: HRSLEGNGARLRGPTQAGLDEAD*DGSRSW Trigger: CCAGCTCCTGGAACCATCCAAATCCGCCTCATCCAA...TCCTGCCTGGGTGGGACCTCTGAGTCTGGCTCCATTTCCTTCTAAGCTCCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CAA 90 bp | CATAGGAGCTTAGAAGGAAATGGAGCCAGACTCAGAGGTCCCACCCAGGCAGGACTCTGCACATCTCCCTaGGTGGCATCCAGCATCATG | + |
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Preference number: 5 (lower is better) Translates to: HRSLEGNGARLRGPTQAGLCTSP*VASSIM Trigger: CATGATGCTGGATGCCACCAAGGGAGATGTGCAGAG...TCCTGCCTGGGTGGGACCTCTGAGTCTGGCTCCATTTCCTTCTAAGCTCCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS TCA 90 bp | CATAGAGGCAGGGCATATACACCCGGTTGCCCACAATCACATCGATaGAGTCGTCTGGAGAGCAGTCTTCTCGGAAGAGTACCTCGGCGT | + |
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Preference number: 5 (lower is better) Translates to: HRGRAYTPGCPQSHR*SRLESSLLGRVPRR Trigger: ACGCCGAGGTACTCTTCCGAGAAGACTGCTCTCCAGACGACTTCATCGATGTGATTGTGGGCAACCGGGTGTATATGCCCTGCCTCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CAA 90 bp | CACAGGCTTTATAGGGAATGTCCTCAGCAAAGCCCTGGTCCCCAGCTTTGCCTAAGCTGGGCCCGATACTaGGCCAGTTTTGCTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: HRLYRECPQQSPGPQLCLSWARY*ASFAFS Trigger: GCTGAAAGCAAAACTGGCCAAGTATCGGGCCCAGCT...TAGGCAAAGCTGGGGACCAGGGCTTTGCTGAGGACATTCCCTATAAAGCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS TCA 90 bp | CAGAGGGAAAGCCAATCAGTGCCACACGGGCATCACCTGACTTCATaGCATCAAAGCCCTCTCCTTTGGATGAGGCGGATTTGGATGGTT | + |
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Preference number: 5 (lower is better) Translates to: QRESQSVPHGHHLTS*HQSPLLWMRRIWMV Trigger: AACCATCCAAATCCGCCTCATCCAAAGGAGAGGGCTTTGATGTCATGAAGTCAGGTGATGCCCGTGTGGCACTGATTGGCTTTCCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CCA 90 bp | GGGCATATACACCCGGTTGCCCACAATCACATCGATGAAGTCGTCTaGAGAGCAGTCTTCTCGGAAGAGTACCTCGGCGTTGAAGATCTT | + |
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Preference number: 5 (lower is better) Translates to: GHIHPVAHNHIDEVV*RAVFSEEYLGVEDL Trigger: AAGATCTTCAACGCCGAGGTACTCTTCCGAGAAGACTGCTCTCCAGACGACTTCATCGATGTGATTGTGGGCAACCGGGTGTATATGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CAA 90 bp | CACAGGCTTTATAGGGAATGTCCTCAGCAAAGCCCTGGTCCCCAGCTTTGCCTATCAAAGCCCTCTCCTTaGGATGAGGCGGATTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: HRLYRECPQQSPGPQLCLSKPSP*DEADLD Trigger: ATCCAAATCCGCCTCATCCAAAGGAGAGGGCTTTGA...TAGGCAAAGCTGGGGACCAGGGCTTTGCTGAGGACATTCCCTATAAAGCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CAA 90 bp | CACAGGCTTTATAGGGAATGTCCTCAGCAAAGCCCTGGTCCCCAGCTTTGCCTATGGATGTTGGCACCTTaGTATTCAATGACCCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: HRLYRECPQQSPGPQLCLWMLAP*YSMTPG Trigger: CCCTGGGGTCATTGAATACAAAGGTGCCAACATCCA...TAGGCAAAGCTGGGGACCAGGGCTTTGCTGAGGACATTCCCTATAAAGCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS-3UTR CAA 90 bp | TTCCTGGGGTTTATGTTTGTACTTTTCCCGTTTGTGTGTTCCAGGGAGGCCGAGGGCATATACACCCGGTaGCCCACAATCACATCGATG | + |
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Preference number: 5 (lower is better) Translates to: FLGFMFVLFPFVCSREAEGIYTR*PTITSM Trigger: CATCGATGTGATTGTGGGCAACCGGGTGTATATGCC...CTCGGCCTCCCTGGAACACACAAACGGGAAAAGTACAAACATAAACCCCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS GCA 72 bp | ACGACGACATCAGCTGTGCGTGCTACGGCAATCACCTaGCGGCCACGGCCTCGGCCTTGTGCTGCTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TTTSAVRATAIT*RPRPRPCAAPS Trigger: TGAAGGAGCAGCACAAGGCCGAGGCCGTGGCCGGCAGGTGATTGCCGTAGCACGCACAGCTGATGTCGTCGT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS TCA 72 bp | GCCGGCCACGGCCTCGGCCTTGTGCTGCTCCTTCAATaGTTCCAGGAAGGTCCAAGAGCTGGATGTTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: AGHGLGLVLLLQ*FQEGPRAGCWH Trigger: GTGCCAACATCCAGCTCTTGGACCTTCCTGGAATCATTGAAGGAGCAGCACAAGGCCGAGGCCGTGGCCGGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS GCA 72 bp | GGCAATCACCTGCCGGCCACGGCCTCGGCCTTGTGCTaGTCCTTCAATGATTCCAGGAAGGTCCAAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GNHLPATASALC*SFNDSRKVQEL Trigger: CAGCTCTTGGACCTTCCTGGAATCATTGAAGGAGCAGCACAAGGCCGAGGCCGTGGCCGGCAGGTGATTGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CCA 72 bp | CTCATGCTCCATAGTGTGGGTCAGGCCTACCCGCTGTaGGCTGTACTTGGTGCTGGTACCCCACACCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LMLHSVGQAYPL*AVLGAGTPHQG Trigger: GCCTTGGTGTGGGGTACCAGCACCAAGTACAGCCCACAGCGGGTAGGCCTGACCCACACTATGGAGCATGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS TCA 72 bp | TGTACTTGGTGCTGGTACCCCACACCAAGGCGTACTTaGACTGGCTGGCCAGTGACCGATGGATGCGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: CTWCWYPTPRRT*TGWPVTDGCGG Trigger: GCCACCGCATCCATCGGTCACTGGCCAGCCAGTTCAAGTACGCCTTGGTGTGGGGTACCAGCACCAAGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS GCA 72 bp | TGGTTCCAGGAGCTGGGCCCGATACTTGGCCAGTTTTaGTTTCAGCAGGCCCAGGTGGTACTCGGTGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: WFQELGPILGQF*FQQAQVVLGGL Trigger: AAGGCCACCGAGTACCACCTGGGCCTGCTGAAAGCAAAACTGGCCAAGTATCGGGCCCAGCTCCTGGAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CCA 72 bp | ACCAAGGCGTACTTGAACTGGCTGGCCAGTGACCGATaGATGCGGTGGCACACGTGTTCAACAGAGGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: TKAYLNWLASDR*MRWHTCSTEAP Trigger: AGGGGCCTCTGTTGAACACGTGTGCCACCGCATCCATCGGTCACTGGCCAGCCAGTTCAAGTACGCCTTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CAA 72 bp | ATGGTTCCAGGAGCTGGGCCCGATACTTGGCCAGTTTaGCTTTCAGCAGGCCCAGGTGGTACTCGGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: MVPGAGPDTWPV*LSAGPGGTRWP Trigger: AGGCCACCGAGTACCACCTGGGCCTGCTGAAAGCAAAACTGGCCAAGTATCGGGCCCAGCTCCTGGAACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CAA 90 bp | TTGGATGAGGCGGATTTGGATGGTTCCAGGAGCTGGGCCCGATACTaGGCCAGTTTTGCTTTCAGCAGGCCCAGGTGGTACTCGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LDEADLDGSRSWARY*ASFAFSRPRWYSVA Trigger: GGCCACCGAGTACCACCTGGGCCTGCTGAAAGCAAAACTGGCCAAGTATCGGGCCCAGCTCCTGGAACCATCCAAATCCGCCTCATCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS TCA 72 bp | ACCCCACACCAAGGCGTACTTGAACTGGCTGGCCAGTaGCCGATGGATGCGGTGGCACACGTGTTCAACAGA | + |
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Preference number: 6 (lower is better) Translates to: TPHQGVLELAGQ*PMDAVAHVFNR Trigger: TCTGTTGAACACGTGTGCCACCGCATCCATCGGTCACTGGCCAGCCAGTTCAAGTACGCCTTGGTGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CAA 72 bp | GCGGATTTGGATGGTTCCAGGAGCTGGGCCCGATACTaGGCCAGTTTTGCTTTCAGCAGGCCCAGGTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: ADLDGSRSWARY*ASFAFSRPRWY Trigger: GTACCACCTGGGCCTGCTGAAAGCAAAACTGGCCAAGTATCGGGCCCAGCTCCTGGAACCATCCAAATCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CAA 72 bp | ATAGTGTGGGTCAGGCCTACCCGCTGTGGGCTGTACTaGGTGCTGGTACCCCACACCAAGGCGTACTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: IVWVRPTRCGLY*VLVPHTKAYLN Trigger: GTTCAAGTACGCCTTGGTGTGGGGTACCAGCACCAAGTACAGCCCACAGCGGGTAGGCCTGACCCACACTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CAA 90 bp | GCCACACGGGCATCACCTGACTTCATGACATCAAAGCCCTCTCCTTaGGATGAGGCGGATTTGGATGGTTCCAGGAGCTGGGCCCGATAC | + |
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Preference number: 6 (lower is better) Translates to: ATRASPDFMTSKPSP*DEADLDGSRSWARY Trigger: GTATCGGGCCCAGCTCCTGGAACCATCCAAATCCGCCTCATCCAAAGGAGAGGGCTTTGATGTCATGAAGTCAGGTGATGCCCGTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS TCA 72 bp | ACCTCTGCACATCTCCCTTGGTGGCATCCAGCATCATaGCGACGACATCAGCTGTGCGTGCTACGGCAATCA | + |
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Preference number: 6 (lower is better) Translates to: TSAHLPWWHPAS*RRHQLCVLRQS Trigger: TGATTGCCGTAGCACGCACAGCTGATGTCGTCGTCATGATGCTGGATGCCACCAAGGGAGATGTGCAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CCA 72 bp | CCTTTGGATGAGGCGGATTTGGATGGTTCCAGGAGCTaGGCCCGATACTTGGCCAGTTTTGCTTTCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PLDEADLDGSRS*ARYLASFAFSR Trigger: CCTGCTGAAAGCAAAACTGGCCAAGTATCGGGCCCAGCTCCTGGAACCATCCAAATCCGCCTCATCCAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CCA 72 bp | CACCCGGTTGCCCACAATCACATCGATGAAGTCGTCTaGAGAGCAGTCTTCTCGGAAGAGTACCTCGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: HPVAHNHIDEVV*RAVFSEEYLGV Trigger: AACGCCGAGGTACTCTTCCGAGAAGACTGCTCTCCAGACGACTTCATCGATGTGATTGTGGGCAACCGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CCA 72 bp | TTCACAATCTGGATGACGTCCTCATGCTCCATAGTGTaGGTCAGGCCTACCCGCTGTGGGCTGTACTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: FTIWMTSSCSIV*VRPTRCGLYLV Trigger: CACCAAGTACAGCCCACAGCGGGTAGGCCTGACCCACACTATGGAGCATGAGGACGTCATCCAGATTGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CAA 72 bp | ATGACATCAAAGCCCTCTCCTTTGGATGAGGCGGATTaGGATGGTTCCAGGAGCTGGGCCCGATACTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: MTSKPSPLDEAD*DGSRSWARYLA Trigger: GGCCAAGTATCGGGCCCAGCTCCTGGAACCATCCAAATCCGCCTCATCCAAAGGAGAGGGCTTTGATGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CAA 90 bp | CCTGACTTCATGACATCAAAGCCCTCTCCTTTGGATGAGGCGGATTaGGATGGTTCCAGGAGCTGGGCCCGATACTTGGCCAGTTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PDFMTSKPSPLDEAD*DGSRSWARYLASFA Trigger: AGCAAAACTGGCCAAGTATCGGGCCCAGCTCCTGGAACCATCCAAATCCGCCTCATCCAAAGGAGAGGGCTTTGATGTCATGAAGTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS TCA 72 bp | AGCCAATCAGTGCCACACGGGCATCACCTGACTTCATaGCATCAAAGCCCTCTCCTTTGGATGAGGCGGATT | + |
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Preference number: 6 (lower is better) Translates to: SQSVPHGHHLTS*HQSPLLWMRRI Trigger: AATCCGCCTCATCCAAAGGAGAGGGCTTTGATGTCATGAAGTCAGGTGATGCCCGTGTGGCACTGATTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CAA 72 bp | GCATCACCTGACTTCATGACATCAAAGCCCTCTCCTTaGGATGAGGCGGATTTGGATGGTTCCAGGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ASPDFMTSKPSP*DEADLDGSRSW Trigger: CCAGCTCCTGGAACCATCCAAATCCGCCTCATCCAAAGGAGAGGGCTTTGATGTCATGAAGTCAGGTGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS TCA 72 bp | AGGGCATATACACCCGGTTGCCCACAATCACATCGATaGAGTCGTCTGGAGAGCAGTCTTCTCGGAAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: RAYTPGCPQSHR*SRLESSLLGRV Trigger: TACTCTTCCGAGAAGACTGCTCTCCAGACGACTTCATCGATGTGATTGTGGGCAACCGGGTGTATATGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CAA 72 bp | TCTGGAGAGCAGTCTTCTCGGAAGAGTACCTCGGCGTaGAAGATCTTGTATTCATGTAGGATGAGCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: SGEQSSRKSTSA*KILYSCRMSCT Trigger: GGTGCAGCTCATCCTACATGAATACAAGATCTTCAACGCCGAGGTACTCTTCCGAGAAGACTGCTCTCCAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS TCA 72 bp | CACCAGCTTCTCAGAGCATTGTGTCAGTGTGACTGTTaGGTTAAAGGAGATGCCACCACCTTTCTTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: HQLLRALCQCDC*VKGDATTFLGL Trigger: AAGCCCAAGAAAGGTGGTGGCATCTCCTTTAACTCAACAGTCACACTGACACAATGCTCTGAGAAGCTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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| CDS CCA 72 bp | TGTTGGGCTTTCGAGCTAAACGGTCTACTTCTTCCATaGAGATCTGGTCGATTTTGTTATACACATAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: CWAFELNGLLLP*RSGRFCYTHRG Trigger: GCCTCTATGTGTATAACAAAATCGACCAGATCTCCATGGAAGAAGTAGACCGTTTAGCTCGAAAGCCCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018568.4 |
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