Pregenerated sensors for DRG1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020457

Ensembl transcript IDs: ENSMUST00000020741.12, ENSMUST00000159304.8

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR GCA 90 bp	GCCAGCGGGCCCACCAGCTTCTTTATACAGTTCAATAGAAGTGACAGCAAAGTAAGTCATAAGGAACACTaGTGTGGCCAGCCAGCAGAT	+
Preference number: 2 (lower is better) Translates to: ASGPTSFFIQFNRSDSKVSHKEH*CGQPAD Trigger: ATCTGCTGGCTGGCCACAGCAGTGTTCCTTATGACT...TACTTTGCTGTCACTTCTATTGAACTGTATAAAGAAGCTGGTGGGCCCGCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020741.12
3UTR TCA 72 bp	GTATCCCAATCCAGAGGCTGCCAAAGACAGAGGGGCTaGGGAAGGTACTTAGTCATAAGGAACACTGCTGTG	+
Preference number: 3 (lower is better) Translates to: VSQSRGCQRQRG*GRYLVIRNTAV Trigger: CACAGCAGTGTTCCTTATGACTAAGTACCTTCCTCAGCCCCTCTGTCTTTGGCAGCCTCTGGATTGGGATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020741.12
CDS-3UTR TCA 90 bp	ATCAATCCCTGTATCCCAATCCAGAGGCTGCCAAAGACAGAGGGGCTGAGGAAGGTGGCTTTGTTCTTCTaGGTCCGAGCCATCTCGGCT	+
Preference number: 4 (lower is better) Translates to: INPCIPIQRLPKTEGLRKVALFF*VRAISA Trigger: AGCCGAGATGGCTCGGACTCAGAAGAACAAAGCCAC...CTTCCTCAGCCCCTCTGTCTTTGGCAGCCTCTGGATTGGGATACAGGGATTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020741.12
CDS-3UTR GCA 90 bp	CAATCCCTGTATCCCAATCCAGAGGCTGCCAAAGACAGAGGGGCTGAGGAAGGTACACGTTCGGGCCACTaGAATGACTTGACGACCTCT	+
Preference number: 4 (lower is better) Translates to: QSLYPNPEAAKDRGAEEGTRSGH*NDLTTS Trigger: AGAGGTCGTCAAGTCATTGCAGTGGCCCGAACGTGT...ACCTTCCTCAGCCCCTCTGTCTTTGGCAGCCTCTGGATTGGGATACAGGGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020741.12
CDS-3UTR TCA 90 bp	GCTGATGAAAGGGATTCTAGGCCAGCCTCAGCTGCAAGAGTTCAAAGCCAGCCTTCTTCACAATCTGAATaGCGTCTTCATCTTCCAATG	+
Preference number: 4 (lower is better) Translates to: ADERDSRPASAARVQSQPSSQSE*RLHLPM Trigger: CATTGGAAGATGAAGACGTCATTCAGATTGTGAAGA...AGGCTGGCTTTGAACTCTTGCAGCTGAGGCTGGCCTAGAATCCCTTTCATCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020741.12
CDS-3UTR CCA 90 bp	ACTGAGGAGATGGAGGCTGATGAAAGGGATTCTAGGCCAGCCTCAGCTGCAAGAACTGGCCTTTCGGTTTaGTGTAAATTCTCACTAGTT	+
Preference number: 4 (lower is better) Translates to: TEEMEADERDSRPASAARTGLSV*CKFSLV Trigger: AACTAGTGAGAATTTACACCAAACCGAAAGGCCAGT...TCTTGCAGCTGAGGCTGGCCTAGAATCCCTTTCATCAGCCTCCATCTCCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020741.12
CDS-3UTR CCA 90 bp	ACAAGGTTTCTTAACCACACCATCCCTAAAAGACCTGGAACCAATCTTCTTCTCACTGGCCTTTCGGTTTaGTGTAAATTCTCACTAGTT	+
Preference number: 4 (lower is better) Translates to: TRFLNHTIPKRPGTNLLLTGLSV*CKFSLV Trigger: AACTAGTGAGAATTTACACCAAACCGAAAGGCCAGT...GAGAAGAAGATTGGTTCCAGGTCTTTTAGGGATGGTGTGGTTAAGAAACCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159304.8
CDS-3UTR CAA 90 bp	CTGAGGAGATGGAGGCTGATGAAAGGGATTCTAGGCCAGCCTCAGCTGCAAGAGAGTTACTTAGCAGAGTaGATTTCCCCACAGATGGAA	+
Preference number: 5 (lower is better) Translates to: LRRWRLMKGILGQPQLQESYLAE*ISPQME Trigger: TTCCATCTGTGGGGAAATCAACTCTGCTAAGTAACT...CTCTTGCAGCTGAGGCTGGCCTAGAATCCCTTTCATCAGCCTCCATCTCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020741.12