Pregenerated sensors for DRD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039358Ensembl transcript IDs: ENSMUST00000041646.4
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAAAGGTGACTGCCCCTCCTCCCAGCCACAAATGAATGTACTGTaGGCTTATGGAAACCACAACAAATCAGGGAGAAATCCCGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: SKGDCPSSQPQMNVL*AYGNHNKSGRNPGH Trigger: GTGGCCGGGATTTCTCCCTGATTTGTTGTGGTTTCCATAAGCGCACAGTACATTCATTTGTGGCTGGGAGGAGGGGCAGTCACCTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR CCA 90 bp | GCACTGGCACTTGTGGTTTCTCTAGGAGAAACACTGAGCACCAACTaGCAAAGCAAAGGTGACTGCCCCTCCTCCCAGCCACAAATGAAT | + |
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Preference number: 1 (lower is better) Translates to: ALALVVSLGETLSTN*QSKGDCPSSQPQMN Trigger: ATTCATTTGTGGCTGGGAGGAGGGGCAGTCACCTTTGCTTTGCCAGTTGGTGCTCAGTGTTTCTCCTAGAGAAACCACAAGTGCCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR CCA 90 bp | AAATCATACCAGAATAAAGGACACTTCACCGTACTCAGTGCAGGGTaGGAAAGCAAAAAGACAGGTGGGCTCCTCCGTGAGCCCCTAACC | + |
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Preference number: 1 (lower is better) Translates to: KSYQNKGHFTVLSAG*ESKKTGGLLREPLT Trigger: GGTTAGGGGCTCACGGAGGAGCCCACCTGTCTTTTTGCTTTCCCACCCTGCACTGAGTACGGTGAAGTGTCCTTTATTCTGGTATGATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR TCA 90 bp | CCAACTGGCAAAGCAAAGGTGACTGCCCCTCCTCCCAGCCACAAATaGATGTACTGTGCGCTTATGGAAACCACAACAAATCAGGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: PTGKAKVTAPPPSHK*MYCALMETTTNQGE Trigger: TTCTCCCTGATTTGTTGTGGTTTCCATAAGCGCACAGTACATTCATTTGTGGCTGGGAGGAGGGGCAGTCACCTTTGCTTTGCCAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR TCA 90 bp | GTTCATCCAGGCATGTGTTGCCTCTGGCTTTCTGCATATATAGGCTaGAGTTCATTCCATTTGCAATGGCCTGCAAAGAAAATCGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: VHPGMCCLWLSAYIG*SSFHLQWPAKKIVC Trigger: GCAGACGATTTTCTTTGCAGGCCATTGCAAATGGAATGAACTTCAGCCTATATATGCAGAAAGCCAGAGGCAACACATGCCTGGATGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR GCA 90 bp | AGGACCAGGTTCCACTTTCTCGTCTCTAAAGGGAACTCTCTTCTGTaGCCAGAATATCTGAGTTTATTCCAACAGCCTCTGCTCATTCAT | + |
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Preference number: 1 (lower is better) Translates to: RTRFHFLVSKGNSLL*PEYLSLFQQPLLIH Trigger: ATGAATGAGCAGAGGCTGTTGGAATAAACTCAGATATTCTGGGCACAGAAGAGAGTTCCCTTTAGAGACGAGAAAGTGGAACCTGGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR GCA 90 bp | GCATTTCCTCAAGGCCCTTTGTTCTGCGAGTTCCCTAAGCAAAGCTaGTCAGAAAACAAATGTGTACTCCAAAATCCTGCTGTCTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: AFPQGPLFCEFPKQS*SENKCVLQNPAVFQ Trigger: TTGGAAGACAGCAGGATTTTGGAGTACACATTTGTTTTCTGAGCAGCTTTGCTTAGGGAACTCGCAGAACAAAGGGCCTTGAGGAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR TCA 90 bp | ACTTTCTCGTCTCTAAAGGGAACTCTCTTCTGTGCCCAGAATATCTaGGTTTATTCCAACAGCCTCTGCTCATTCATTTTCTCAGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: TFSSLKGTLFCAQNI*VYSNSLCSFIFSAK Trigger: CTTAGCTGAGAAAATGAATGAGCAGAGGCTGTTGGAATAAACTCAGATATTCTGGGCACAGAAGAGAGTTCCCTTTAGAGACGAGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR GCA 90 bp | GCTTTCTGCATATATAGGCTGAAGTTCATTCCATTTGCAATGGCCTaGAAAGAAAATCGTCTGCTTCAAAGCAGGATTTCGGTTTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: AFCIYRLKFIPFAMA*KENRLLQSRISVLK Trigger: CTTCAAAACCGAAATCCTGCTTTGAAGCAGACGATTTTCTTTGCAGGCCATTGCAAATGGAATGAACTTCAGCCTATATATGCAGAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR-3UTR GCA 90 bp | GCACTGGCACTTGTGGTTTCTCTAGGAGAAACACTGAGCACCAACTGGCAAAGCATATTTGTGTGCGTGTaGGCGCGCATTTGTGCATGC | + |
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Preference number: 2 (lower is better) Translates to: ALALVVSLGETLSTNWQSIFVCV*ARICAC Trigger: GCATGCACAAATGCGCGCGCACACGCACACAAATAT...GCTTTGCCAGTTGGTGCTCAGTGTTTCTCCTAGAGAAACCACAAGTGCCAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR-3UTR GCA 90 bp | GCACTGGCACTTGTGGTTTCTCTAGGAGAAACACTGAGCACCAACTGGCAAAGCGGGAACTCTCTTCTGTaGCCAGAATATCTGAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: ALALVVSLGETLSTNWQSGNSLL*PEYLSL Trigger: TAAACTCAGATATTCTGGGCACAGAAGAGAGTTCCC...GCTTTGCCAGTTGGTGCTCAGTGTTTCTCCTAGAGAAACCACAAGTGCCAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR-3UTR TCA 90 bp | GAGAAACCGTTTTTGGAGCAGGGGCGTGTAAGAACTAACATATGCACATTTCATAGGGGGTCTTTCCCATaGGCCGAGGGTATCTATCTA | + |
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Preference number: 2 (lower is better) Translates to: EKPFLEQGRVRTNICTFHRGSFP*AEGIYL Trigger: TAGATAGATACCCTCGGCTCATGGGAAAGACCCCCT...ATGAAATGTGCATATGTTAGTTCTTACACGCCCCTGCTCCAAAAACGGTTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR-3UTR GCA 90 bp | TCTAAAGGGAACTCTCTTCTGTGCCCAGAATATCTGAGTTTATTCCAACAGCCTGTGTGTATATTTGTGTaGGTGTGCGCGCGCATTTGT | + |
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Preference number: 2 (lower is better) Translates to: SKGNSLLCPEYLSLFQQPVCIFV*VCARIC Trigger: ACAAATGCGCGCGCACACGCACACAAATATACACAC...AGGCTGTTGGAATAAACTCAGATATTCTGGGCACAGAAGAGAGTTCCCTTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR-3UTR GCA 90 bp | GCCACTCAGACCTGTCATTTAAAAAGCAACCCAGGTGCAAGTCACAGAACAAGCTATTCCAACAGCCTCTaGTCATTCATTTTCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: ATQTCHLKSNPGASHRTSYSNSL*SFIFSA Trigger: AGCTGAGAAAATGAATGAGCAGAGGCTGTTGGAATA...GCTTGTTCTGTGACTTGCACCTGGGTTGCTTTTTAAATGACAGGTCTGAGTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR-3UTR GCA 90 bp | ACCAGAATAAAGGACACTTCACCGTACTCAGTGCAGGGTGGGAAAGCAAAAAGACAAATGAATGTACTGTaGGCTTATGGAAACCACAAC | + |
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Preference number: 2 (lower is better) Translates to: TRIKDTSPYSVQGGKAKRQMNVL*AYGNHN Trigger: GTTGTGGTTTCCATAAGCGCACAGTACATTCATTTG...TCTTTTTGCTTTCCCACCCTGCACTGAGTACGGTGAAGTGTCCTTTATTCTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR-3UTR GCA 90 bp | GAGAAACCGTTTTTGGAGCAGGGGCGTGTAAGAACTAACATATGCACATTTCATGAAGTTCATTCCATTTaGAATGGCCTGCAAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: EKPFLEQGRVRTNICTFHEVHSI*NGLQRK Trigger: TTTTCTTTGCAGGCCATTGCAAATGGAATGAACTTC...ATGAAATGTGCATATGTTAGTTCTTACACGCCCCTGCTCCAAAAACGGTTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR TCA 72 bp | AGGGTGGGAAAGCAAAAAGACAGGTGGGCTCCTCCGTaGGCCCCTAACCCTGCAAGTTCATCCAGGCATGTG | + |
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Preference number: 3 (lower is better) Translates to: RVGKQKDRWAPP*APNPASSSRHV Trigger: CACATGCCTGGATGAACTTGCAGGGTTAGGGGCTCACGGAGGAGCCCACCTGTCTTTTTGCTTTCCCACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR CCA 72 bp | CTTGTGGTTTCTCTAGGAGAAACACTGAGCACCAACTaGCAAAGCAAAGGTGACTGCCCCTCCTCCCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LVVSLGETLSTN*QSKGDCPSSQP Trigger: TGGCTGGGAGGAGGGGCAGTCACCTTTGCTTTGCCAGTTGGTGCTCAGTGTTTCTCCTAGAGAAACCACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR CCA 72 bp | CAGAATAAAGGACACTTCACCGTACTCAGTGCAGGGTaGGAAAGCAAAAAGACAGGTGGGCTCCTCCGTGAG | + |
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Preference number: 3 (lower is better) Translates to: QNKGHFTVLSAG*ESKKTGGLLRE Trigger: CTCACGGAGGAGCCCACCTGTCTTTTTGCTTTCCCACCCTGCACTGAGTACGGTGAAGTGTCCTTTATTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR-3UTR CAA 90 bp | ACTGGCACTTGTGGTTTCTCTAGGAGAAACACTGAGCACCAACTGGCAAAGCAACAGGAGTGTGTATATTaGTGTGCGTGTGCGCGCGCA | + |
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Preference number: 3 (lower is better) Translates to: TGTCGFSRRNTEHQLAKQQECVY*CACARA Trigger: TGCGCGCGCACACGCACACAAATATACACACTCCTG...TTGCTTTGCCAGTTGGTGCTCAGTGTTTCTCCTAGAGAAACCACAAGTGCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR TCA 72 bp | AGGAGAAACACTGAGCACCAACTGGCAAAGCAAAGGTaGCTGCCCCTCCTCCCAGCCACAAATGAATGTACT | + |
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Preference number: 3 (lower is better) Translates to: RRNTEHQLAKQR*LPLLPATNECT Trigger: AGTACATTCATTTGTGGCTGGGAGGAGGGGCAGTCACCTTTGCTTTGCCAGTTGGTGCTCAGTGTTTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR CCA 72 bp | CTCCTCCCAGCCACAAATGAATGTACTGTGCGCTTATaGAAACCACAACAAATCAGGGAGAAATCCCGGCCA | + |
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Preference number: 3 (lower is better) Translates to: LLPATNECTVRL*KPQQIREKSRP Trigger: TGGCCGGGATTTCTCCCTGATTTGTTGTGGTTTCCATAAGCGCACAGTACATTCATTTGTGGCTGGGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR TCA 72 bp | TCAGGCTTGAGAATCCCGCATCTAATACTGTGTAGGTaGAATGAGCCGTCAGTGTGTCCTGAAGGTGTGACT | + |
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Preference number: 3 (lower is better) Translates to: SGLRIPHLILCR*NEPSVCPEGVT Trigger: AGTCACACCTTCAGGACACACTGACGGCTCATTTCACCTACACAGTATTAGATGCGGGATTCTCAAGCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR GCA 72 bp | GACTGCCCCTCCTCCCAGCCACAAATGAATGTACTGTaGGCTTATGGAAACCACAACAAATCAGGGAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: DCPSSQPQMNVL*AYGNHNKSGRN Trigger: ATTTCTCCCTGATTTGTTGTGGTTTCCATAAGCGCACAGTACATTCATTTGTGGCTGGGAGGAGGGGCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR TCA 72 bp | AAAGCAAAGGTGACTGCCCCTCCTCCCAGCCACAAATaGATGTACTGTGCGCTTATGGAAACCACAACAAAT | + |
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Preference number: 3 (lower is better) Translates to: KAKVTAPPPSHK*MYCALMETTTN Trigger: ATTTGTTGTGGTTTCCATAAGCGCACAGTACATTCATTTGTGGCTGGGAGGAGGGGCAGTCACCTTTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR GCA 72 bp | TGCCACTCAGACCTGTCATTTAAAAAGCAACCCAGGTaGAAGTCACAGAACAAGCCTCTGTTAGAAAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: CHSDLSFKKQPR*KSQNKPLLERV Trigger: TACCCTTTCTAACAGAGGCTTGTTCTGTGACTTGCACCTGGGTTGCTTTTTAAATGACAGGTCTGAGTGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR GCA 72 bp | TCCAAGAAGTCAGCATTTCCTCAAGGCCCTTTGTTCTaGGAGTTCCCTAAGCAAAGCTGCTCAGAAAACAAA | + |
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Preference number: 3 (lower is better) Translates to: SKKSAFPQGPLF*EFPKQSCSENK Trigger: TTTGTTTTCTGAGCAGCTTTGCTTAGGGAACTCGCAGAACAAAGGGCCTTGAGGAAATGCTGACTTCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR CCA 72 bp | GCCTCTGCTCATTCATTTTCTCAGCTAAGAATCGTTTaGTTTCTACGCAGCAGGACTACAGAAAGCATAAGC | + |
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Preference number: 3 (lower is better) Translates to: ASAHSFSQLRIV*FLRSRTTESIS Trigger: GCTTATGCTTTCTGTAGTCCTGCTGCGTAGAAACCAAACGATTCTTAGCTGAGAAAATGAATGAGCAGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR TCA 72 bp | TCTCTAAAGGGAACTCTCTTCTGTGCCCAGAATATCTaGGTTTATTCCAACAGCCTCTGCTCATTCATTTTC | + |
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Preference number: 3 (lower is better) Translates to: SLKGTLFCAQNI*VYSNSLCSFIF Trigger: GAAAATGAATGAGCAGAGGCTGTTGGAATAAACTCAGATATTCTGGGCACAGAAGAGAGTTCCCTTTAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR GCA 72 bp | ATATATAGGCTGAAGTTCATTCCATTTGCAATGGCCTaGAAAGAAAATCGTCTGCTTCAAAGCAGGATTTCG | + |
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Preference number: 3 (lower is better) Translates to: IYRLKFIPFAMA*KENRLLQSRIS Trigger: CGAAATCCTGCTTTGAAGCAGACGATTTTCTTTGCAGGCCATTGCAAATGGAATGAACTTCAGCCTATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR GCA 90 bp | AGCACCAACTGGCAAAGCAAAGGTGACTGCCCCTCCTCCCAGCCACAAATGAATCCGGGGGCGTCCACCTaGGCCAGTTGCCTCTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: STNWQSKGDCPSSQPQMNPGAST*ASCLCN Trigger: GTTGCAGAGGCAACTGGCGCAGGTGGACGCCCCCGG...ATTCATTTGTGGCTGGGAGGAGGGGCAGTCACCTTTGCTTTGCCAGTTGGTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR TCA 90 bp | GCACTGGCACTTGTGGTTTCTCTAGGAGAAACACTGAGCACCAACTGGCAAAGCAGGCCAGGGCCACCATaGCCAGGGCTACACGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ALALVVSLGETLSTNWQSRPGPP*PGLHAG Trigger: CCCAGCGTGTAGCCCTGGTCATGGTGGCCCTGGCCT...GCTTTGCCAGTTGGTGCTCAGTGTTTCTCCTAGAGAAACCACAAGTGCCAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR CCA 90 bp | ACCACAACAAATCAGGGAGAAATCCCGGCCACAGGAAAGACCCTTCAACCTGCACCCAGGGTGTCTCATTaGACAGCAGGCCCTCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: TTTNQGEIPATGKTLQPAPRVSH*TAGPLG Trigger: GCCGAGAGGGCCTGCTGTCCAATGAGACACCCTGGG...TGCAGGTTGAAGGGTCTTTCCTGTGGCCGGGATTTCTCCCTGATTTGTTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR CCA 90 bp | GCACTGGCACTTGTGGTTTCTCTAGGAGAAACACTGAGCACCAACTGGCAAAGCCCAGTCCTTGGGCCCTaGGCATCTCCACTGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: ALALVVSLGETLSTNWQSPVLGP*ASPLLQ Trigger: CTGCAGCAGTGGAGATGCCCAGGGCCCAAGGACTGG...GCTTTGCCAGTTGGTGCTCAGTGTTTCTCCTAGAGAAACCACAAGTGCCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR GCA 90 bp | CAGCAGGACTACAGAAAGCATAAGCACACCAGGAGTGTGTATATTTGTGTGCGTTCCACCTGCGCCAGTTaGCTCTGCAACCCCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: QQDYRKHKHTRSVYICVRSTCAS*LCNPSR Trigger: GCGGCTGGGGTTGCAGAGGCAACTGGCGCAGGTGGA...ACGCACACAAATATACACACTCCTGGTGTGCTTATGCTTTCTGTAGTCCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR GCA 90 bp | ACCACAACAAATCAGGGAGAAATCCCGGCCACAGGAAAGACCCTTCAACCTGCACCAGATGTCGCAGAATaGCCCAAAGGGCCAGTACCC | + |
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Preference number: 4 (lower is better) Translates to: TTTNQGEIPATGKTLQPAPDVAE*PKGPVP Trigger: GGGTACTGGCCCTTTGGGGCATTCTGCGACATCTGG...TGCAGGTTGAAGGGTCTTTCCTGTGGCCGGGATTTCTCCCTGATTTGTTGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR GCA 90 bp | AGCACCAACTGGCAAAGCAAAGGTGACTGCCCCTCCTCCCAGCCACAAATGAATCCTGCCTTGTCTCTGTaGCAATTGAGTTGGACCGGG | + |
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Preference number: 4 (lower is better) Translates to: STNWQSKGDCPSSQPQMNPALSL*QLSWTG Trigger: CCCGGTCCAACTCAATTGGCACAGAGACAAGGCAGG...ATTCATTTGTGGCTGGGAGGAGGGGCAGTCACCTTTGCTTTGCCAGTTGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR GCA 90 bp | GAACAGGGGGCTATGGTCCCAAAGTCTAGAAAGTCACAGACCATACCAGCAATTTCGGCCCTGGGAGCCTaGCTTGTCTCTGTGCCAATT | + |
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Preference number: 4 (lower is better) Translates to: EQGAMVPKSRKSQTIPAISALGA*LVSVPI Trigger: AATTGGCACAGAGACAAGGCAGGCTCCCAGGGCCGA...AATTGCTGGTATGGTCTGTGACTTTCTAGACTTTGGGACCATAGCCCCCTGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR TCA 90 bp | ACCAGAATAAAGGACACTTCACCGTACTCAGTGCAGGGTGGGAAAGCAAAAAGACGGCCTTCCAAGGCATaGCCAGCAATGCCACGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TRIKDTSPYSVQGGKAKRRPSKA*PAMPRR Trigger: TCTTCGTGGCATTGCTGGTCATGCCTTGGAAGGCCG...TCTTTTTGCTTTCCCACCCTGCACTGAGTACGGTGAAGTGTCCTTTATTCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR CCA 90 bp | AGCACCAACTGGCAAAGCAAAGGTGACTGCCCCTCCTCCCAGCCACAAATGAATCTGTGCCAATTGAGTTaGACCGGGATAAAGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: STNWQSKGDCPSSQPQMNLCQLS*TGIKEM Trigger: CATCTCCTTTATCCCGGTCCAACTCAATTGGCACAG...ATTCATTTGTGGCTGGGAGGAGGGGCAGTCACCTTTGCTTTGCCAGTTGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR TCA 90 bp | GCACTGGCACTTGTGGTTTCTCTAGGAGAAACACTGAGCACCAACTGGCAAAGCCGGCCAGAGATACGATaGAGATGTTGGTCATTTTGG | + |
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Preference number: 4 (lower is better) Translates to: ALALVVSLGETLSTNWQSRPEIR*RCWSFW Trigger: CCAAAATGACCAACATCTTCATCGTATCTCTGGCCG...GCTTTGCCAGTTGGTGCTCAGTGTTTCTCCTAGAGAAACCACAAGTGCCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR GCA 90 bp | ACAGACCATACCAGCAATTGCCACTCAGACCTGTCATTTAAAAAGCAACCCAGGGGGCATCTCCACTGCTaGAGAAGGGAACCATACAGT | + |
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Preference number: 4 (lower is better) Translates to: TDHTSNCHSDLSFKKQPRGHLHC*RREPYS Trigger: ACTGTATGGTTCCCTTCTGCAGCAGTGGAGATGCCC...CCTGGGTTGCTTTTTAAATGACAGGTCTGAGTGGCAATTGCTGGTATGGTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR TCA 90 bp | CCTCTGGCTTTCTGCATATATAGGCTGAAGTTCATTCCATTTGCAATGGCCTGCGGAAACAATTGGGGGTaGGTGGTGAGATTTTGCCTA | + |
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Preference number: 4 (lower is better) Translates to: PLAFCIYRLKFIPFAMACGNNWG*VVRFCL Trigger: TAGGCAAAATCTCACCACTCACCCCCAATTGTTTCC...GCAGGCCATTGCAAATGGAATGAACTTCAGCCTATATATGCAGAAAGCCAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR GCA 90 bp | ACTGGCACTTGTGGTTTCTCTAGGAGAAACACTGAGCACCAACTGGCAAAGCAACACCTTCCGGAAGTCTaGATTAAAGGCATAGATGAT | + |
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Preference number: 4 (lower is better) Translates to: TGTCGFSRRNTEHQLAKQHLPEV*IKGIDD Trigger: ATCATCTATGCCTTTAATGCAGACTTCCGGAAGGTG...TTGCTTTGCCAGTTGGTGCTCAGTGTTTCTCCTAGAGAAACCACAAGTGCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR CAA 72 bp | AAGAAATCCAAGAAGTCAGCATTTCCTCAAGGCCCTTaGTTCTGCGAGTTCCCTAAGCAAAGCTGCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: KKSKKSAFPQGP*FCEFPKQSCSE Trigger: TTCTGAGCAGCTTTGCTTAGGGAACTCGCAGAACAAAGGGCCTTGAGGAAATGCTGACTTCTTGGATTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| 3UTR CAA 72 bp | AGCCTCTGCTCATTCATTTTCTCAGCTAAGAATCGTTaGGTTTCTACGCAGCAGGACTACAGAAAGCATAAG | + |
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Preference number: 4 (lower is better) Translates to: SLCSFIFSAKNR*VSTQQDYRKHK Trigger: CTTATGCTTTCTGTAGTCCTGCTGCGTAGAAACCAAACGATTCTTAGCTGAGAAAATGAATGAGCAGAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS TCA 90 bp | CGCAGGCTGGGGTCAGGTTCGCAGGCCCCACGGCTCCGGCAACTCTaGGCATGCTCAGCTGCCCTTTCTAGGGAGGAGATACGGCGGATC | + |
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Preference number: 5 (lower is better) Translates to: RRLGSGSQAPRLRQL*ACSAALSREEIRRI Trigger: GATCCGCCGTATCTCCTCCCTAGAAAGGGCAGCTGAGCATGCTCAGAGTTGCCGGAGCCGTGGGGCCTGCGAACCTGACCCCAGCCTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS CCA 90 bp | TCGAAGGTGGTCTCGCTGACACAAGGGAAGCCAGTCCTTGGGCCCTaGGCATCTCCACTGCTGCAGAAGGGAACCATACAGTTCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: SKVVSLTQGKPVLGP*ASPLLQKGTIQFRM Trigger: CATCCTGAACTGTATGGTTCCCTTCTGCAGCAGTGGAGATGCCCAGGGCCCAAGGACTGGCTTCCCTTGTGTCAGCGAGACCACCTTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR CAA 90 bp | GCCACTCAGACCTGTCATTTAAAAAGCAACCCAGGTGCAAGTCACAGAACAAGCGTCCACCTGCGCCAGTaGCCTCTGCAACCCCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: ATQTCHLKSNPGASHRTSVHLRQ*PLQPQP Trigger: CGGCTGGGGTTGCAGAGGCAACTGGCGCAGGTGGAC...GCTTGTTCTGTGACTTGCACCTGGGTTGCTTTTTAAATGACAGGTCTGAGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS CCA 90 bp | GAATATGTCGAAGGTGGTCTCGCTGACACAAGGGAAGCCAGTCCTTaGGCCCTGGGCATCTCCACTGCTGCAGAAGGGAACCATACAGTT | + |
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Preference number: 5 (lower is better) Translates to: EYVEGGLADTREASP*ALGISTAAEGNHTV Trigger: AACTGTATGGTTCCCTTCTGCAGCAGTGGAGATGCCCAGGGCCCAAGGACTGGCTTCCCTTGTGTCAGCGAGACCACCTTCGACATATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR CAA 90 bp | AAAGGACCAGGTTCCACTTTCTCGTCTCTAAAGGGAACTCTCTTCTGTGCCCAGCCCTGGGAGCCTGCCTaGTCTCTGTGCCAATTGAGT | + |
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Preference number: 5 (lower is better) Translates to: KGPGSTFSSLKGTLFCAQPWEPA*SLCQLS Trigger: ACTCAATTGGCACAGAGACAAGGCAGGCTCCCAGGG...CTGGGCACAGAAGAGAGTTCCCTTTAGAGACGAGAAAGTGGAACCTGGTCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR CAA 90 bp | ACCAGAATAAAGGACACTTCACCGTACTCAGTGCAGGGTGGGAAAGCAAAAAGATCCCAGGGTGTCTCATaGGACAGCAGGCCCTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: TRIKDTSPYSVQGGKAKRSQGVS*DSRPSR Trigger: CCGAGAGGGCCTGCTGTCCAATGAGACACCCTGGGA...TCTTTTTGCTTTCCCACCCTGCACTGAGTACGGTGAAGTGTCCTTTATTCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR CAA 90 bp | GAAGTTCATTCCATTTGCAATGGCCTGCAAAGAAAATCGTCTGCTTCAAAGCAGGGGTTGAGAGAGGAGTaGGCCCAGCCAAACCAGACG | + |
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Preference number: 5 (lower is better) Translates to: EVHSICNGLQRKSSASKQGLREE*AQPNQT Trigger: CGTCTGGTTTGGCTGGGCCAACTCCTCTCTCAACCC...CTGCTTTGAAGCAGACGATTTTCTTTGCAGGCCATTGCAAATGGAATGAACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR CAA 90 bp | GCACTGGCACTTGTGGTTTCTCTAGGAGAAACACTGAGCACCAACTGGCAAAGCGGTCGTTGGAGAGATTaGAGACATGTGATCGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: ALALVVSLGETLSTNWQSGRWRD*RHVIER Trigger: CCTTTCGATCACATGTCTCAAATCTCTCCAACGACC...GCTTTGCCAGTTGGTGCTCAGTGTTTCTCCTAGAGAAACCACAAGTGCCAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR CAA 90 bp | GAACAGGGGGCTATGGTCCCAAAGTCTAGAAAGTCACAGACCATACCAGCAATTGTGAGTGGTGAGATTTaGCCTAAGGAAACCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: EQGAMVPKSRKSQTIPAIVSGEI*PKETSS Trigger: GGAGGAGGTTTCCTTAGGCAAAATCTCACCACTCAC...AATTGCTGGTATGGTCTGTGACTTTCTAGACTTTGGGACCATAGCCCCCTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR CAA 90 bp | GCACTGGCACTTGTGGTTTCTCTAGGAGAAACACTGAGCACCAACTGGCAAAGCGTTTTATGGAAACAATaGGGGGTGAGTGGTGAGATT | + |
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Preference number: 5 (lower is better) Translates to: ALALVVSLGETLSTNWQSVLWKQ*GVSGEI Trigger: AATCTCACCACTCACCCCCAATTGTTTCCATAAAAC...GCTTTGCCAGTTGGTGCTCAGTGTTTCTCCTAGAGAAACCACAAGTGCCAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS-3UTR CAA 90 bp | GAAGTTCATTCCATTTGCAATGGCCTGCAAAGAAAATCGTCTGCTTCAAAGCAGTTGTCTCTGTGCCAATaGAGTTGGACCGGGATAAAG | + |
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Preference number: 5 (lower is better) Translates to: EVHSICNGLQRKSSASKQLSLCQ*SWTGIK Trigger: CTTTATCCCGGTCCAACTCAATTGGCACAGAGACAA...CTGCTTTGAAGCAGACGATTTTCTTTGCAGGCCATTGCAAATGGAATGAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS CAA 72 bp | CCGTCTAGCTCCCAACCTTCCTCCCAGGGTGTCTCATaGGACAGCAGGCCCTCTCGGCCCTGGGAGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PSSSQPSSQGVS*DSRPSRPWEPA Trigger: GGCAGGCTCCCAGGGCCGAGAGGGCCTGCTGTCCAATGAGACACCCTGGGAGGAAGGTTGGGAGCTAGACGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS TCA 72 bp | AGGTCCAGACGATTAAGAGAGTCAGGAGGCCAGCGGTaGCCACCTGCGCGGGTCCCAGTGGGGCTGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: RSRRLRESGGQR*PPARVPVGLLS Trigger: GCTCAGCAGCCCCACTGGGACCCGCGCAGGTGGTCACCGCTGGCCTCCTGACTCTCTTAATCGTCTGGACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS CCA 72 bp | CGTCTAGCTCCCAACCTTCCTCCCAGGGTGTCTCATTaGACAGCAGGCCCTCTCGGCCCTGGGAGCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: RLAPNLPPRVSH*TAGPLGPGSLP Trigger: AGGCAGGCTCCCAGGGCCGAGAGGGCCTGCTGTCCAATGAGACACCCTGGGAGGAAGGTTGGGAGCTAGACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS CAA 90 bp | TCTGTTCTCCCGTCTAGCTCCCAACCTTCCTCCCAGGGTGTCTCATaGGACAGCAGGCCCTCTCGGCCCTGGGAGCCTGCCTTGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SVLPSSSQPSSQGVS*DSRPSRPWEPALSL Trigger: CAGAGACAAGGCAGGCTCCCAGGGCCGAGAGGGCCTGCTGTCCAATGAGACACCCTGGGAGGAAGGTTGGGAGCTAGACGGGAGAACAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS TCA 72 bp | GGGTCAGGTTCGCAGGCCCCACGGCTCCGGCAACTCTaGGCATGCTCAGCTGCCCTTTCTAGGGAGGAGATA | + |
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Preference number: 6 (lower is better) Translates to: GSGSQAPRLRQL*ACSAALSREEI Trigger: TATCTCCTCCCTAGAAAGGGCAGCTGAGCATGCTCAGAGTTGCCGGAGCCGTGGGGCCTGCGAACCTGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS GCA 72 bp | CTCATTGGACAGCAGGCCCTCTCGGCCCTGGGAGCCTaGCTTGTCTCTGTGCCAATTGAGTTGGACCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: LIGQQALSALGA*LVSVPIELDRD Trigger: ATCCCGGTCCAACTCAATTGGCACAGAGACAAGGCAGGCTCCCAGGGCCGAGAGGGCCTGCTGTCCAATGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS CCA 72 bp | GAAGGTGGTCTCGCTGACACAAGGGAAGCCAGTCCTTaGGCCCTGGGCATCTCCACTGCTGCAGAAGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: EGGLADTREASP*ALGISTAAEGN Trigger: GTTCCCTTCTGCAGCAGTGGAGATGCCCAGGGCCCAAGGACTGGCTTCCCTTGTGTCAGCGAGACCACCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS CAA 72 bp | CCTCTCCCACCTCCCTGTCTCCGGAGGACACCGCATTaGGGATCATGTGGACATAGGCAGCAGCGATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PLPPPCLRRTPH*GSCGHRQQRSP Trigger: GGGAGATCGCTGCTGCCTATGTCCACATGATCCCAAATGCGGTGTCCTCCGGAGACAGGGAGGTGGGAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS CCA 72 bp | GTCTCGCTGACACAAGGGAAGCCAGTCCTTGGGCCCTaGGCATCTCCACTGCTGCAGAAGGGAACCATACAG | + |
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Preference number: 6 (lower is better) Translates to: VSLTQGKPVLGP*ASPLLQKGTIQ Trigger: CTGTATGGTTCCCTTCTGCAGCAGTGGAGATGCCCAGGGCCCAAGGACTGGCTTCCCTTGTGTCAGCGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS CCA 72 bp | CTCTCCCACCTCCCTGTCTCCGGAGGACACCGCATTTaGGATCATGTGGACATAGGCAGCAGCGATCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LSHLPVSGGHRI*DHVDIGSSDLP Trigger: AGGGAGATCGCTGCTGCCTATGTCCACATGATCCCAAATGCGGTGTCCTCCGGAGACAGGGAGGTGGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS TCA 72 bp | AGCCAAACCAGACGAATATGTCGAAGGTGGTCTCGCTaGCACAAGGGAAGCCAGTCCTTGGGCCCTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SQTRRICRRWSR*HKGSQSLGPGH Trigger: ATGCCCAGGGCCCAAGGACTGGCTTCCCTTGTGTCAGCGAGACCACCTTCGACATATTCGTCTGGTTTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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| CDS CAA 72 bp | GTTTTATGGAAACAATTGGGGGTGAGTGGTGAGATTTaGCCTAAGGAAACCTCCTCCTCACAGTCAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: VLWKQLGVSGEI*PKETSSSQSSS Trigger: GGAGCTTGACTGTGAGGAGGAGGTTTCCTTAGGCAAAATCTCACCACTCACCCCCAATTGTTTCCATAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041646.4 |
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