Pregenerated sensors for DRD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025496Ensembl transcript IDs: ENSMUST00000026569.6
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCTTCTTGTAGGACTGGGCCTTGGCCAAGGAGCCCCAACACCTTaGCTGCTTGGGCCCCTTAGTCCAGCCTTGAACCTTGCCGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PLLVGLGLGQGAPTP*LLGPLSPALNLAAW Trigger: CCAGGCGGCAAGGTTCAAGGCTGGACTAAGGGGCCCAAGCAGCCAAGGTGTTGGGGCTCCTTGGCCAAGGCCCAGTCCTACAAGAAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR TCA 90 bp | AAGGAGCCCCAACACCTTGGCTGCTTGGGCCCCTTAGTCCAGCCTTaGACCTTGCCGCCTGGTCACATAGATACCCAGATGCTGGACATA | + |
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Preference number: 1 (lower is better) Translates to: KEPQHLGCLGPLVQP*TLPPGHIDTQMLDI Trigger: TATGTCCAGCATCTGGGTATCTATGTGACCAGGCGGCAAGGTTCAAGGCTGGACTAAGGGGCCCAAGCAGCCAAGGTGTTGGGGCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR TCA 90 bp | AGACTGGGTGGGTCTGAGTGGAGGGCTCCCTTCCAGAGGGCACCTTaGGGAACTTGGTCAGTGCTGAGTTTCAGGCACCTTTTGGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: RLGGSEWRAPFQRAP*GTWSVLSFRHLLEK Trigger: TTTCTCCAAAAGGTGCCTGAAACTCAGCACTGACCAAGTTCCTCAAGGTGCCCTCTGGAAGGGAGCCCTCCACTCAGACCCACCCAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR TCA 90 bp | TGTACTCAGAAAGTTTCCAAAATAGGATACCCACCACCCCTTCAATaGCAGCAGAGCCCTCCCTCCCTAGCTCTCCAAGGAGCAAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: CTQKVSKIGYPPPLQ*QQSPPSLALQGARV Trigger: AACTCTTGCTCCTTGGAGAGCTAGGGAGGGAGGGCTCTGCTGTCATTGAAGGGGTGGTGGGTATCCTATTTTGGAAACTTTCTGAGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR CCA 90 bp | ACAGCTCAGTTTAATACTAACAGTGGCAGGAAAACAAGACCAAAATaGCAAAGTCATCAAGGAAATGCCCAACCCTATGGGACAGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: TAQFNTNSGRKTRPK*QSHQGNAQPYGTAC Trigger: GCAGGCTGTCCCATAGGGTTGGGCATTTCCTTGATGACTTTGCCATTTTGGTCTTGTTTTCCTGCCACTGTTAGTATTAAACTGAGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR TCA 90 bp | CTGGGCCTTGGCCAAGGAGCCCCAACACCTTGGCTGCTTGGGCCCCTTAGTCCATTCCAGAGGGCACCTTaGGGAACTTGGTCAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LGLGQGAPTPWLLGPLSPFQRAP*GTWSVL Trigger: CAGCACTGACCAAGTTCCTCAAGGTGCCCTCTGGAA...TGGACTAAGGGGCCCAAGCAGCCAAGGTGTTGGGGCTCCTTGGCCAAGGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR CCA 90 bp | GTCATCAAGGAAATGCCCAACCCTATGGGACAGCCTGCAGGGGCATCCATGGCACTGGGTGGGTCTGAGTaGAGGGCTCCCTTCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VIKEMPNPMGQPAGASMALGGSE*RAPFQR Trigger: CCTCTGGAAGGGAGCCCTCCACTCAGACCCACCCAG...TGCCATGGATGCCCCTGCAGGCTGTCCCATAGGGTTGGGCATTTCCTTGATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR TCA 90 bp | TGGCAAAGTCATCAAGGAAATGCCCAACCCTATGGGACAGCCTGCAGGGGCATCGCCTGGATAGGATCCTaGGGACCCAGCAGCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: WQSHQGNAQPYGTACRGIAWIGS*GPSSLR Trigger: CCTGAGGCTGCTGGGTCCTCAGGATCCTATCCAGGC...GATGCCCCTGCAGGCTGTCCCATAGGGTTGGGCATTTCCTTGATGACTTTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR TCA 90 bp | GCCCACAGCAGCCCTGAGTCACATCTCTCCCATAACAGGACGGGGGAGGGAAAACCTGCCTCCTGGAGCTaGACTGAGCATCCTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: AHSSPESHLSHNRTGEGKPASWS*TEHPQR Trigger: TCTTTGAGGATGCTCAGTTCAGCTCCAGGAGGCAGG...TTTTCCCTCCCCCGTCCTGTTATGGGAGAGATGTGACTCAGGGCTGCTGTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR TCA 90 bp | CAAAGTCATCAAGGAAATGCCCAACCCTATGGGACAGCCTGCAGGGGCATCCATCAGACTGGGTGGGTCTaGGTGGAGGGCTCCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: QSHQGNAQPYGTACRGIHQTGWV*VEGSLP Trigger: TGGAAGGGAGCCCTCCACTCAGACCCACCCAGTCTG...ATGGATGCCCCTGCAGGCTGTCCCATAGGGTTGGGCATTTCCTTGATGACTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR CCA 90 bp | GTCATCAAGGAAATGCCCAACCCTATGGGACAGCCTGCAGGGGCATCCATGGCACAGCTGCCTTTGATGTaGGACCCCAGCCTAGGACCA | + |
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Preference number: 2 (lower is better) Translates to: VIKEMPNPMGQPAGASMAQLPLM*DPSLGP Trigger: TGGTCCTAGGCTGGGGTCCCACATCAAAGGCAGCTG...TGCCATGGATGCCCCTGCAGGCTGTCCCATAGGGTTGGGCATTTCCTTGATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR TCA 90 bp | GTCATCAAGGAAATGCCCAACCCTATGGGACAGCCTGCAGGGGCATCCATGGCATGGAAGGTCAACAGATaGCACAGCAGGGGCATGAGC | + |
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Preference number: 2 (lower is better) Translates to: VIKEMPNPMGQPAGASMAWKVNR*HSRGMS Trigger: GCTCATGCCCCTGCTGTGTCATCTGTTGACCTTCCA...TGCCATGGATGCCCCTGCAGGCTGTCCCATAGGGTTGGGCATTTCCTTGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR CCA 90 bp | ACCCTATGGGACAGCCTGCAGGGGCATCCATGGCATCTACCCCCAAGGAGTGTCGTTCCCCTACTTTTCTaGGGCAGAGACTTCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: TLWDSLQGHPWHLPPRSVVPLLF*GRDFRS Trigger: GCTTCTGAAGTCTCTGCCCCAGAAAAGTAGGGGAAC...GACACTCCTTGGGGGTAGATGCCATGGATGCCCCTGCAGGCTGTCCCATAGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR TCA 90 bp | GCCCACAGCAGCCCTGAGTCACATCTCTCCCATAACAGGACGGGGGAGGGAAAACTCCTGGAGCTGAACTaGGCATCCTCAAAGACAGAA | + |
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Preference number: 2 (lower is better) Translates to: AHSSPESHLSHNRTGEGKLLELN*ASSKTE Trigger: TTCTGTCTTTGAGGATGCTCAGTTCAGCTCCAGGAG...TTTTCCCTCCCCCGTCCTGTTATGGGAGAGATGTGACTCAGGGCTGCTGTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR TCA 90 bp | CAGAACACCAAGATGGGTTTTGGGGTAGTGACCACCCAAGAGCAATGGATGAGTCCACCACCCCTTCAATaGCAGCAGAGCCCTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: QNTKMGFGVVTTQEQWMSPPPLQ*QQSPPS Trigger: GGAGGGAGGGCTCTGCTGTCATTGAAGGGGTGGTGG...ACTCATCCATTGCTCTTGGGTGGTCACTACCCCAAAACCCATCTTGGTGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR TCA 90 bp | TGGCAATTTCCCTCTGTGCTGGGGAATTGTCCCTGTTCAACCAGAGCTAGTATACCCTTAGTCCAGCCTTaGACCTTGCCGCCTGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: WQFPSVLGNCPCSTRASIPLVQP*TLPPGH Trigger: GTGACCAGGCGGCAAGGTTCAAGGCTGGACTAAGGG...TATACTAGCTCTGGTTGAACAGGGACAATTCCCCAGCACAGAGGGAAATTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR GCA 90 bp | TGGCAAAGTCATCAAGGAAATGCCCAACCCTATGGGACAGCCTGCAGGGGCATCGGCAATTTCCCTCTGTaGTGGGGAATTGTCCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: WQSHQGNAQPYGTACRGIGNFPL*WGIVPV Trigger: AACAGGGACAATTCCCCAGCACAGAGGGAAATTGCC...GATGCCCCTGCAGGCTGTCCCATAGGGTTGGGCATTTCCTTGATGACTTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR CCA 90 bp | TGGCAAAGTCATCAAGGAAATGCCCAACCCTATGGGACAGCCTGCAGGGGCATCACCACCCAAGAGCAATaGATGAGTGACACATGCCAC | + |
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Preference number: 2 (lower is better) Translates to: WQSHQGNAQPYGTACRGITTQEQ*MSDTCH Trigger: GTGGCATGTGTCACTCATCCATTGCTCTTGGGTGGT...GATGCCCCTGCAGGCTGTCCCATAGGGTTGGGCATTTCCTTGATGACTTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR TCA 90 bp | GTGGCAGGAAAACAAGACCAAAATGGCAAAGTCATCAAGGAAATGCCCAACCCTCCCAAGAGCAATGGATaGGTGACACATGCCACCTGG | + |
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Preference number: 2 (lower is better) Translates to: VAGKQDQNGKVIKEMPNPPKSNG*VTHATW Trigger: CCAGGTGGCATGTGTCACTCATCCATTGCTCTTGGG...AGGGTTGGGCATTTCCTTGATGACTTTGCCATTTTGGTCTTGTTTTCCTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR GCA 90 bp | AAAACAAGACCAAAATGGCAAAGTCATCAAGGAAATGCCCAACCCTATGGGACACCCCAACACCTTGGCTaGTTGGGCCCCTTAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: KTRPKWQSHQGNAQPYGTPQHLG*LGPLVQ Trigger: CTGGACTAAGGGGCCCAAGCAGCCAAGGTGTTGGGG...TGTCCCATAGGGTTGGGCATTTCCTTGATGACTTTGCCATTTTGGTCTTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR GCA 90 bp | ACTAACAGTGGCAGGAAAACAAGACCAAAATGGCAAAGTCATCAAGGAAATGCCCCCTATGGGACAGCCTaGAGGGGCATCCATGGCATC | + |
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Preference number: 2 (lower is better) Translates to: TNSGRKTRPKWQSHQGNAPYGTA*RGIHGI Trigger: GATGCCATGGATGCCCCTGCAGGCTGTCCCATAGGG...GGCATTTCCTTGATGACTTTGCCATTTTGGTCTTGTTTTCCTGCCACTGTTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR CCA 90 bp | TATGGCAATTTCCCTCTGTGCTGGGGAATTGTCCCTGTTCAACCAGAGCTAGTACTCTGCACACAGTCTTaGAACTCCTTGACCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: YGNFPLCWGIVPVQPELVLCTQS*NSLTSA Trigger: TGCAGAGGTCAAGGAGTTCCAAGACTGTGTGCAGAG...TACTAGCTCTGGTTGAACAGGGACAATTCCCCAGCACAGAGGGAAATTGCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR CAA 90 bp | GGGGGTGCTACTACTGTAGCACTCACAGCTCATTATTCCTCAATATaGAGAACAGAGTGTGACACATTGTGCCAGCTGCCTTTGATGTGG | + |
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Preference number: 2 (lower is better) Translates to: GGATTVALTAHYSSI*RTECDTLCQLPLMW Trigger: CCACATCAAAGGCAGCTGGCACAATGTGTCACACTCTGTTCTCAATATTGAGGAATAATGAGCTGTGAGTGCTACAGTAGTAGCACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR TCA 90 bp | GTGGCAGGAAAACAAGACCAAAATGGCAAAGTCATCAAGGAAATGCCCAACCCTAGTCTTGGAACTCCTTaGCCTCTGCAGGACATCCTT | + |
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Preference number: 2 (lower is better) Translates to: VAGKQDQNGKVIKEMPNPSLGTP*PLQDIL Trigger: AAGGATGTCCTGCAGAGGTCAAGGAGTTCCAAGACT...AGGGTTGGGCATTTCCTTGATGACTTTGCCATTTTGGTCTTGTTTTCCTGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR TCA 90 bp | AAACAAGACCAAAATGGCAAAGTCATCAAGGAAATGCCCAACCCTATGGGACAGCTATGTGGACAGACATaGACCCAAGACCCCATTGGC | + |
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Preference number: 2 (lower is better) Translates to: KQDQNGKVIKEMPNPMGQLCGQT*TQDPIG Trigger: GCCAATGGGGTCTTGGGTTCATGTCTGTCCACATAG...CTGTCCCATAGGGTTGGGCATTTCCTTGATGACTTTGCCATTTTGGTCTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR GCA 90 bp | GGGGTAGTGACCACCCAAGAGCAATGGATGAGTGACACATGCCACCTGGAATTCGTAGAAAGCTATGTGTaGTGTACTCAGAAAGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: GVVTTQEQWMSDTCHLEFVESYV*CTQKVS Trigger: GGAAACTTTCTGAGTACAGCACACATAGCTTTCTAC...GAATTCCAGGTGGCATGTGTCACTCATCCATTGCTCTTGGGTGGTCACTACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR CCA 90 bp | CAGAACACCAAGATGGGTTTTGGGGTAGTGACCACCCAAGAGCAATGGATGAGTGTTTCAGGCACCTTTTaGAGAAAGGCTGGTAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: QNTKMGFGVVTTQEQWMSVSGTF*RKAGRK Trigger: CTTTCTACCAGCCTTTCTCCAAAAGGTGCCTGAAAC...ACTCATCCATTGCTCTTGGGTGGTCACTACCCCAAAACCCATCTTGGTGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR CCA 90 bp | AAAACAAGACCAAAATGGCAAAGTCATCAAGGAAATGCCCAACCCTATGGGACACCCAGCCTTCATAAGTaGTTAGAAAAGATTTCGTTT | + |
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Preference number: 2 (lower is better) Translates to: KTRPKWQSHQGNAQPYGTPSLHK*LEKISF Trigger: AAACGAAATCTTTTCTAACCACTTATGAAGGCTGGG...TGTCCCATAGGGTTGGGCATTTCCTTGATGACTTTGCCATTTTGGTCTTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR CCA 72 bp | GTAGGACTGGGCCTTGGCCAAGGAGCCCCAACACCTTaGCTGCTTGGGCCCCTTAGTCCAGCCTTGAACCTT | + |
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Preference number: 3 (lower is better) Translates to: VGLGLGQGAPTP*LLGPLSPALNL Trigger: AAGGTTCAAGGCTGGACTAAGGGGCCCAAGCAGCCAAGGTGTTGGGGCTCCTTGGCCAAGGCCCAGTCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR TCA 72 bp | CAACACCTTGGCTGCTTGGGCCCCTTAGTCCAGCCTTaGACCTTGCCGCCTGGTCACATAGATACCCAGATG | + |
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Preference number: 3 (lower is better) Translates to: QHLGCLGPLVQP*TLPPGHIDTQM Trigger: CATCTGGGTATCTATGTGACCAGGCGGCAAGGTTCAAGGCTGGACTAAGGGGCCCAAGCAGCCAAGGTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR GCA 72 bp | AGTCATCAAGGAAATGCCCAACCCTATGGGACAGCCTaGAGGGGCATCCATGGCATCTACCCCCAAGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: SHQGNAQPYGTA*RGIHGIYPQGV Trigger: CACTCCTTGGGGGTAGATGCCATGGATGCCCCTGCAGGCTGTCCCATAGGGTTGGGCATTTCCTTGATGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR CAA 90 bp | CAGAACACCAAGATGGGTTTTGGGGTAGTGACCACCCAAGAGCAATGGATGAGTCCCCTTAGTCCAGCCTaGAACCTTGCCGCCTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: QNTKMGFGVVTTQEQWMSPLSPA*NLAAWS Trigger: TGACCAGGCGGCAAGGTTCAAGGCTGGACTAAGGGG...ACTCATCCATTGCTCTTGGGTGGTCACTACCCCAAAACCCATCTTGGTGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR CAA 90 bp | CAGAACACCAAGATGGGTTTTGGGGTAGTGACCACCCAAGAGCAATGGATGAGTCAACACCTTGGCTGCTaGGGCCCCTTAGTCCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: QNTKMGFGVVTTQEQWMSQHLGC*GPLVQP Trigger: AGGCTGGACTAAGGGGCCCAAGCAGCCAAGGTGTTG...ACTCATCCATTGCTCTTGGGTGGTCACTACCCCAAAACCCATCTTGGTGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR TCA 72 bp | GAGACTTCAGAAGCCTCCTGCCTCCTGGAGCTGAACTaGGCATCCTCAAAGACAGAAGTTAACTGGGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: ETSEASCLLELN*ASSKTEVNWGR Trigger: CCTGCCCCAGTTAACTTCTGTCTTTGAGGATGCTCAGTTCAGCTCCAGGAGGCAGGAGGCTTCTGAAGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR TCA 72 bp | CCTTCCAGAGGGCACCTTGAGGAACTTGGTCAGTGCTaGGTTTCAGGCACCTTTTGGAGAAAGGCTGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: PSRGHLEELGQC*VSGTFWRKAGR Trigger: TCTACCAGCCTTTCTCCAAAAGGTGCCTGAAACTCAGCACTGACCAAGTTCCTCAAGGTGCCCTCTGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR TCA 72 bp | AAAGTTTCCAAAATAGGATACCCACCACCCCTTCAATaGCAGCAGAGCCCTCCCTCCCTAGCTCTCCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: KVSKIGYPPPLQ*QQSPPSLALQG Trigger: TCCTTGGAGAGCTAGGGAGGGAGGGCTCTGCTGTCATTGAAGGGGTGGTGGGTATCCTATTTTGGAAACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR CCA 72 bp | GAAACTAAGGCAGATGTAGTAGTTCCCCTACTTTTCTaGGGCAGAGACTTCAGAAGCCTCCTGCCTCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: ETKADVVVPLLF*GRDFRSLLPPG Trigger: TCCAGGAGGCAGGAGGCTTCTGAAGTCTCTGCCCCAGAAAAGTAGGGGAACTACTACATCTGCCTTAGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR CCA 72 bp | AAGGGAGCCTCAGTTCCACTAATACTAGACTCTATGTaGACAGACATGAACCCAAGACCCCATTGGCCCCTT | + |
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Preference number: 3 (lower is better) Translates to: KGASVPLILDSM*TDMNPRPHWPL Trigger: AAGGGGCCAATGGGGTCTTGGGTTCATGTCTGTCCACATAGAGTCTAGTATTAGTGGAACTGAGGCTCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR-3UTR CAA 90 bp | GTGGCAGGAAAACAAGACCAAAATGGCAAAGTCATCAAGGAAATGCCCAACCCTACAGAGTGTGACACATaGTGCCAGCTGCCTTTGATG | + |
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Preference number: 3 (lower is better) Translates to: VAGKQDQNGKVIKEMPNPTECDT*CQLPLM Trigger: CATCAAAGGCAGCTGGCACAATGTGTCACACTCTGT...AGGGTTGGGCATTTCCTTGATGACTTTGCCATTTTGGTCTTGTTTTCCTGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR TCA 72 bp | TTTTGGGGTAGTGACCACCCAAGAGCAATGGATGAGTaGCACATGCCACCTGGAATTCATCCAATTTATTGT | + |
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Preference number: 3 (lower is better) Translates to: FWGSDHPRAMDE*HMPPGIHPIYC Trigger: ACAATAAATTGGATGAATTCCAGGTGGCATGTGTCACTCATCCATTGCTCTTGGGTGGTCACTACCCCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR GCA 72 bp | GCACCTTTTGGAGAAAGGCTGGTAGAAAGCTATGTGTaGTGTACTCAGAAAGTTTCCAAAATAGGATACCCA | + |
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Preference number: 3 (lower is better) Translates to: APFGERLVESYV*CTQKVSKIGYP Trigger: TGGGTATCCTATTTTGGAAACTTTCTGAGTACAGCACACATAGCTTTCTACCAGCCTTTCTCCAAAAGGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS-3UTR GCA 90 bp | CTGGGCCTTGGCCAAGGAGCCCCAACACCTTGGCTGCTTGGGCCCCTTAGTCCACGGCAGGACTCTCATTaGCTTGCGCTCCCTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: LGLGQGAPTPWLLGPLSPRQDSH*LALPSR Trigger: ACGGGAAGGGAGCGCAAGGCAATGAGAGTCCTGCCG...TGGACTAAGGGGCCCAAGCAGCCAAGGTGTTGGGGCTCCTTGGCCAAGGCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS-3UTR TCA 90 bp | GCTCTCCAAGGAGCAAGAGTTGGCCTGGATAGGATCCTGAGGACCCAGCAGCCTGGCCGGGCACATCATTaGGGCCACACACCACTGGCG | + |
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Preference number: 4 (lower is better) Translates to: ALQGARVGLDRILRTQQPGRAHH*GHTPLA Trigger: CGCCAGTGGTGTGTGGCCTCAATGATGTGCCCGGCC...AGGCTGCTGGGTCCTCAGGATCCTATCCAGGCCAACTCTTGCTCCTTGGAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS-3UTR GCA 90 bp | GCCCACAGCAGCCCTGAGTCACATCTCTCCCATAACAGGACGGGGGAGGGAAAAAGCGCCCGCGTGATGTaGACCACGAAGAAAGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: AHSSPESHLSHNRTGEGKSARVM*TTKKGV Trigger: GACGCCTTTCTTCGTGGTGCACATCACGCGGGCGCT...TTTTCCCTCCCCCGTCCTGTTATGGGAGAGATGTGACTCAGGGCTGCTGTGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS-3UTR CCA 90 bp | GCTCTCCAAGGAGCAAGAGTTGGCCTGGATAGGATCCTGAGGACCCAGCAGCCTGCAGGCCGCGGAAAGTaGCCCAGTAAAGCAGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: ALQGARVGLDRILRTQQPAGRGK*PSKAVA Trigger: TGCTACTGCTTTACTGGGCCACTTTCCGCGGCCTGC...AGGCTGCTGGGTCCTCAGGATCCTATCCAGGCCAACTCTTGCTCCTTGGAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS-3UTR TCA 90 bp | GTGGCAGGAAAACAAGACCAAAATGGCAAAGTCATCAAGGAAATGCCCAACCCTGCCACGTGGCGGCGATaGGCAGCAGCTGGCACTGAC | + |
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Preference number: 4 (lower is better) Translates to: VAGKQDQNGKVIKEMPNPATWRR*AAAGTD Trigger: GTCAGTGCCAGCTGCTGCTCATCGCCGCCACGTGGC...AGGGTTGGGCATTTCCTTGATGACTTTGCCATTTTGGTCTTGTTTTCCTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS-3UTR GCA 90 bp | TGGCAATTTCCCTCTGTGCTGGGGAATTGTCCCTGTTCAACCAGAGCTAGTATATGGGTGTCTGCAGCGTaGGCTCGGAGGCCACGCTCA | + |
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Preference number: 4 (lower is better) Translates to: WQFPSVLGNCPCSTRASIWVSAA*ARRPRS Trigger: TGAGCGTGGCCTCCGAGCGCACGCTGCAGACACCCA...TATACTAGCTCTGGTTGAACAGGGACAATTCCCCAGCACAGAGGGAAATTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR CAA 72 bp | GTGGAGGGCTCCCTTCCAGAGGGCACCTTGAGGAACTaGGTCAGTGCTGAGTTTCAGGCACCTTTTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: VEGSLPEGTLRN*VSAEFQAPFGE Trigger: TTCTCCAAAAGGTGCCTGAAACTCAGCACTGACCAAGTTCCTCAAGGTGCCCTCTGGAAGGGAGCCCTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS-3UTR TCA 90 bp | TGGCAAAGTCATCAAGGAAATGCCCAACCCTATGGGACAGCCTGCAGGGGCATCAGTAAAGCAGTAGCATaGGCGGACAGGGCAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: WQSHQGNAQPYGTACRGISKAVA*ADRAGR Trigger: TCTTCCTGCCCTGTCCGCTCATGCTACTGCTTTACT...GATGCCCCTGCAGGCTGTCCCATAGGGTTGGGCATTTCCTTGATGACTTTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS-3UTR TCA 90 bp | CAGAACACCAAGATGGGTTTTGGGGTAGTGACCACCCAAGAGCAATGGATGAGTGACACAGCGCCCGCGTaGTGTGCACCACGAAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: QNTKMGFGVVTTQEQWMSDTAPA*CAPRRK Trigger: CTTTCTTCGTGGTGCACATCACGCGGGCGCTGTGTC...ACTCATCCATTGCTCTTGGGTGGTCACTACCCCAAAACCCATCTTGGTGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS-3UTR GCA 90 bp | GTGGCAGGAAAACAAGACCAAAATGGCAAAGTCATCAAGGAAATGCCCAACCCTTGGCGCCTCTCCTTCTaGGGGAAGACGGCTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VAGKQDQNGKVIKEMPNPWRLSF*GKTAQE Trigger: CTCCTGAGCCGTCTTCCCGCAGAAGGAGAGGCGCCA...AGGGTTGGGCATTTCCTTGATGACTTTGCCATTTTGGTCTTGTTTTCCTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS-3UTR GCA 90 bp | CAAAGTCATCAAGGAAATGCCCAACCCTATGGGACAGCCTGCAGGGGCATCCATGGAGACGGAGAGTCTTaGGGAAGACACTTCGAAACT | + |
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Preference number: 4 (lower is better) Translates to: QSHQGNAQPYGTACRGIHGDGES*GRHFET Trigger: AGTTTCGAAGTGTCTTCCGCAAGACTCTCCGTCTCC...ATGGATGCCCCTGCAGGCTGTCCCATAGGGTTGGGCATTTCCTTGATGACTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS-3UTR CCA 90 bp | ACTAACAGTGGCAGGAAAACAAGACCAAAATGGCAAAGTCATCAAGGAAATGCCGGCTCGTCCGGAGGCTaGGTAAGGGAGGTGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TNSGRKTRPKWQSHQGNAGSSGG*VREVGS Trigger: ACTGCCCACCTCCCTTACCCAGCCTCCGGACGAGCC...GGCATTTCCTTGATGACTTTGCCATTTTGGTCTTGTTTTCCTGCCACTGTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| 3UTR CAA 72 bp | CCTCAGGAAATTCCTCTAGCTCCTCTTCTAGGACACTaGGTCACTTTTCATAGTGAGGGGAAACTAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PQEIPLAPLLGH*VTFHSEGKLRQ Trigger: CTGCCTTAGTTTCCCCTCACTATGAAAAGTGACCAAGTGTCCTAGAAGAGGAGCTAGAGGAATTTCCTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS GCA 90 bp | GCTGGGTCGGCGCGGCGCGCGGCTGTGAAGTTTGGTGTGCCGGGCTaGCTCCCAGCGCCGCAGGCCGCGGAAAGTGGCCCAGTAAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: AGSARRAAVKFGVPG*LPAPQAAESGPVKQ Trigger: CTGCTTTACTGGGCCACTTTCCGCGGCCTGCGGCGCTGGGAGGCAGCCCGGCACACCAAACTTCACAGCCGCGCGCCGCGCCGACCCAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS CCA 90 bp | CACGGCCGGATCGCGGCCGGGCACATCATTGAGGCCACACACCACTaGCGAAGCCACCGCGGCGGACAGCAGCCACGTGGCGGCGATGAG | + |
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Preference number: 5 (lower is better) Translates to: HGRIAAGHIIEATHH*RSHRGGQQPRGGDE Trigger: CTCATCGCCGCCACGTGGCTGCTGTCCGCCGCGGTGGCTTCGCCAGTGGTGTGTGGCCTCAATGATGTGCCCGGCCGCGATCCGGCCGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS TCA 90 bp | GGTTCTCCAGGCAGCACACGGCCGGATCGCGGCCGGGCACATCATTaGGGCCACACACCACTGGCGAAGCCACCGCGGCGGACAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: GSPGSTRPDRGRAHH*GHTPLAKPPRRTAA Trigger: GGCTGCTGTCCGCCGCGGTGGCTTCGCCAGTGGTGTGTGGCCTCAATGATGTGCCCGGCCGCGATCCGGCCGTGTGCTGCCTGGAGAACC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS TCA 90 bp | GGGAGAGCTGCATCAGCGAGCAGACACCCGGGGCTGCAGGGTCTCTaGGAGAGCTCTGACTCCGGCCTGCTGGAGTCGCTGGGGCTCGTC | + |
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Preference number: 5 (lower is better) Translates to: GRAASASRHPGLQGL*ESSDSGLLESLGLV Trigger: GACGAGCCCCAGCGACTCCAGCAGGCCGGAGTCAGAGCTCTCTCAGAGACCCTGCAGCCCCGGGTGTCTGCTCGCTGATGCAGCTCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS TCA 90 bp | CCCAGCGCCGCAGGCCGCGGAAAGTGGCCCAGTAAAGCAGTAGCATaGGCGGACAGGGCAGGAAGAAGGAGCAGACGGACGAGTAGACCA | + |
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Preference number: 5 (lower is better) Translates to: PSAAGRGKWPSKAVA*ADRAGRRSRRTSRP Trigger: TGGTCTACTCGTCCGTCTGCTCCTTCTTCCTGCCCTGTCCGCTCATGCTACTGCTTTACTGGGCCACTTTCCGCGGCCTGCGGCGCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS TCA 90 bp | CGACTACCACCGGCAGGACTCTCATTGCCTTGCGCTCCCTTCCCGTaGTCTTGGCGCCTCTCCTTCTGCGGGAAGACGGCTCAGGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: RLPPAGLSLPCAPFP*SWRLSFCGKTAQEV Trigger: AACCTCCTGAGCCGTCTTCCCGCAGAAGGAGAGGCGCCAAGATCACGGGAAGGGAGCGCAAGGCAATGAGAGTCCTGCCGGTGGTAGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS-3UTR CAA 90 bp | CAGAACACCAAGATGGGTTTTGGGGTAGTGACCACCCAAGAGCAATGGATGAGTCCGGCAGGACTCTCATaGCCTTGCGCTCCCTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: QNTKMGFGVVTTQEQWMSPAGLS*PCAPFP Trigger: CGGGAAGGGAGCGCAAGGCAATGAGAGTCCTGCCGG...ACTCATCCATTGCTCTTGGGTGGTCACTACCCCAAAACCCATCTTGGTGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS-3UTR CAA 90 bp | CTCACAGCTCATTATTCCTCAATATTGAGAACAGAGTGTGACACATTGTGCCAGCGGCCGGGCACATCATaGAGGCCACACACCACTGGC | + |
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Preference number: 5 (lower is better) Translates to: LTAHYSSILRTECDTLCQRPGTS*RPHTTG Trigger: GCCAGTGGTGTGTGGCCTCAATGATGTGCCCGGCCG...CTGGCACAATGTGTCACACTCTGTTCTCAATATTGAGGAATAATGAGCTGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS CCA 72 bp | GGCCGCTGGGTCGGCGCGGCGCGCGGCTGTGAAGTTTaGTGTGCCGGGCTGCCTCCCAGCGCCGCAGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GRWVGAARGCEV*CAGLPPSAAGR Trigger: GCGGCCTGCGGCGCTGGGAGGCAGCCCGGCACACCAAACTTCACAGCCGCGCGCCGCGCCGACCCAGCGGCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS GCA 72 bp | GCGCGGCGCGCGGCTGTGAAGTTTGGTGTGCCGGGCTaGCTCCCAGCGCCGCAGGCCGCGGAAAGTGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: ARRAAVKFGVPG*LPAPQAAESGP Trigger: TGGGCCACTTTCCGCGGCCTGCGGCGCTGGGAGGCAGCCCGGCACACCAAACTTCACAGCCGCGCGCCGCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS TCA 72 bp | GGCAGCACACGGCCGGATCGCGGCCGGGCACATCATTaGGGCCACACACCACTGGCGAAGCCACCGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GSTRPDRGRAHH*GHTPLAKPPRR Trigger: CCGCCGCGGTGGCTTCGCCAGTGGTGTGTGGCCTCAATGATGTGCCCGGCCGCGATCCGGCCGTGTGCTGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS TCA 72 bp | GGTAAGGGAGGTGGGCAGTCTGGGAAGAAGGGACCCTaGGTAGGGTCCGACACCGGCGGGCCGGGGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: GKGGGQSGKKGP*VGSDTGGPGPL Trigger: CAGCGGCCCCGGCCCGCCGGTGTCGGACCCTACTCAGGGTCCCTTCTTCCCAGACTGCCCACCTCCCTTACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS CAA 72 bp | AGGCAGCACACGGCCGGATCGCGGCCGGGCACATCATaGAGGCCACACACCACTGGCGAAGCCACCGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: RQHTAGSRPGTS*RPHTTGEATAA Trigger: CGCCGCGGTGGCTTCGCCAGTGGTGTGTGGCCTCAATGATGTGCCCGGCCGCGATCCGGCCGTGTGCTGCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS CAA 90 bp | CGGTTCTCCAGGCAGCACACGGCCGGATCGCGGCCGGGCACATCATaGAGGCCACACACCACTGGCGAAGCCACCGCGGCGGACAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RFSRQHTAGSRPGTS*RPHTTGEATAADSS Trigger: GCTGCTGTCCGCCGCGGTGGCTTCGCCAGTGGTGTGTGGCCTCAATGATGTGCCCGGCCGCGATCCGGCCGTGTGCTGCCTGGAGAACCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS TCA 72 bp | CAGACACCCGGGGCTGCAGGGTCTCTGAGAGAGCTCTaGCTCCGGCCTGCTGGAGTCGCTGGGGCTCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: QTPGAAGSLREL*LRPAGVAGARP Trigger: CGGACGAGCCCCAGCGACTCCAGCAGGCCGGAGTCAGAGCTCTCTCAGAGACCCTGCAGCCCCGGGTGTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS CCA 72 bp | ATCGCGGCCGGGCACATCATTGAGGCCACACACCACTaGCGAAGCCACCGCGGCGGACAGCAGCCACGTGGC | + |
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Preference number: 6 (lower is better) Translates to: IAAGHIIEATHH*RSHRGGQQPRG Trigger: GCCACGTGGCTGCTGTCCGCCGCGGTGGCTTCGCCAGTGGTGTGTGGCCTCAATGATGTGCCCGGCCGCGAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS CCA 72 bp | CCGGCCTGCTGGAGTCGCTGGGGCTCGTCCGGAGGCTaGGTAAGGGAGGTGGGCAGTCTGGGAAGAAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: PACWSRWGSSGG*VREVGSLGRRD Trigger: GTCCCTTCTTCCCAGACTGCCCACCTCCCTTACCCAGCCTCCGGACGAGCCCCAGCGACTCCAGCAGGCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS GCA 72 bp | GGCTGCAGGGTCTCTGAGAGAGCTCTGACTCCGGCCTaGTGGAGTCGCTGGGGCTCGTCCGGAGGCTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: GCRVSERALTPA*WSRWGSSGGWV Trigger: TACCCAGCCTCCGGACGAGCCCCAGCGACTCCAGCAGGCCGGAGTCAGAGCTCTCTCAGAGACCCTGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS CCA 72 bp | TCTGAGAGAGCTCTGACTCCGGCCTGCTGGAGTCGCTaGGGCTCGTCCGGAGGCTGGGTAAGGGAGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SERALTPACWSR*GSSGGWVREVG Trigger: GCCCACCTCCCTTACCCAGCCTCCGGACGAGCCCCAGCGACTCCAGCAGGCCGGAGTCAGAGCTCTCTCAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS TCA 72 bp | GCATCAGCGAGCAGACACCCGGGGCTGCAGGGTCTCTaGGAGAGCTCTGACTCCGGCCTGCTGGAGTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: ASASRHPGLQGL*ESSDSGLLESL Trigger: CAGCGACTCCAGCAGGCCGGAGTCAGAGCTCTCTCAGAGACCCTGCAGCCCCGGGTGTCTGCTCGCTGATGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS CCA 72 bp | TGCAGGGTCTCTGAGAGAGCTCTGACTCCGGCCTGCTaGAGTCGCTGGGGCTCGTCCGGAGGCTGGGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: CRVSERALTPAC*SRWGSSGGWVR Trigger: CCTTACCCAGCCTCCGGACGAGCCCCAGCGACTCCAGCAGGCCGGAGTCAGAGCTCTCTCAGAGACCCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS CAA 90 bp | ACCACCGGCAGGACTCTCATTGCCTTGCGCTCCCTTCCCGTGATCTaGGCGCCTCTCCTTCTGCGGGAAGACGGCTCAGGAGGTTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: TTGRTLIALRSLPVI*APLLLREDGSGGCG Trigger: CCCGCAACCTCCTGAGCCGTCTTCCCGCAGAAGGAGAGGCGCCAAGATCACGGGAAGGGAGCGCAAGGCAATGAGAGTCCTGCCGGTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS TCA 72 bp | CCGGCAGGACTCTCATTGCCTTGCGCTCCCTTCCCGTaGTCTTGGCGCCTCTCCTTCTGCGGGAAGACGGCT | + |
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Preference number: 6 (lower is better) Translates to: PAGLSLPCAPFP*SWRLSFCGKTA Trigger: AGCCGTCTTCCCGCAGAAGGAGAGGCGCCAAGATCACGGGAAGGGAGCGCAAGGCAATGAGAGTCCTGCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS GCA 72 bp | CAGGAAGGCCCCGACTACCACCGGCAGGACTCTCATTaGCTTGCGCTCCCTTCCCGTGATCTTGGCGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QEGPDYHRQDSH*LALPSRDLGAS Trigger: AGAGGCGCCAAGATCACGGGAAGGGAGCGCAAGGCAATGAGAGTCCTGCCGGTGGTAGTCGGGGCCTTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS CAA 90 bp | CACACCAGGAAGGCCCCGACTACCACCGGCAGGACTCTCATTGCCTaGCGCTCCCTTCCCGTGATCTTGGCGCCTCTCCTTCTGCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: HTRKAPTTTGRTLIA*RSLPVILAPLLLRE Trigger: TTCCCGCAGAAGGAGAGGCGCCAAGATCACGGGAAGGGAGCGCAAGGCAATGAGAGTCCTGCCGGTGGTAGTCGGGGCCTTCCTGGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS TCA 72 bp | GCAGGCCGCGGAAAGTGGCCCAGTAAAGCAGTAGCATaGGCGGACAGGGCAGGAAGAAGGAGCAGACGGACG | + |
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Preference number: 6 (lower is better) Translates to: AGRGKWPSKAVA*ADRAGRRSRRT Trigger: CGTCCGTCTGCTCCTTCTTCCTGCCCTGTCCGCTCATGCTACTGCTTTACTGGGCCACTTTCCGCGGCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS CAA 72 bp | AAGGCCCCGACTACCACCGGCAGGACTCTCATTGCCTaGCGCTCCCTTCCCGTGATCTTGGCGCCTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: KAPTTTGRTLIA*RSLPVILAPLL Trigger: AAGGAGAGGCGCCAAGATCACGGGAAGGGAGCGCAAGGCAATGAGAGTCCTGCCGGTGGTAGTCGGGGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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| CDS CAA 72 bp | AGGACTCTCATTGCCTTGCGCTCCCTTCCCGTGATCTaGGCGCCTCTCCTTCTGCGGGAAGACGGCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: RTLIALRSLPVI*APLLLREDGSG Trigger: TCCTGAGCCGTCTTCCCGCAGAAGGAGAGGCGCCAAGATCACGGGAAGGGAGCGCAAGGCAATGAGAGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026569.6 |
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