RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DRD2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032259

Ensembl transcript IDs: ENSMUST00000075764.8

Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCAACCCCAGAGCTGGTAAGATACCAGTCTCCCTGGCCCTACCCTaGCAGGATAAGGGTGTGTGGGCAGAGAGGGGCACCGAGCCAAGC +
Preference number: 1 (lower is better)
Translates to: SNPRAGKIPVSLALP*QDKGVWAERGTEPS
Trigger: GCTTGGCTCGGTGCCCCTCTCTGCCCACACACCCTTATCCTGCCAGGGTAGGGCCAGGGAGACTGGTATCTTACCAGCTCTGGGGTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR TCA 90 bp GGAAGGCTGCTGCTTCTTTGGTGCCAAGGAGACAGGATCTGCATGTaGAAGGGGCACTCTGTGAGCTGCTCTGAGCCATGGATCCAACCC +
Preference number: 1 (lower is better)
Translates to: GRLLLLWCQGDRICM*KGHSVSCSEPWIQP
Trigger: GGGTTGGATCCATGGCTCAGAGCAGCTCACAGAGTGCCCCTTTCACATGCAGATCCTGTCTCCTTGGCACCAAAGAAGCAGCAGCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR GCA 90 bp ACTGAGCTAGCTTCCGTGCCTGAGAGGAAGGTCAAGGAAGGCTGCTaGTTCTTTGGTGCCAAGGAGACAGGATCTGCATGTGAAAGGGGC +
Preference number: 1 (lower is better)
Translates to: TELASVPERKVKEGC*FFGAKETGSACERG
Trigger: GCCCCTTTCACATGCAGATCCTGTCTCCTTGGCACCAAAGAAGCAGCAGCCTTCCTTGACCTTCCTCTCAGGCACGGAAGCTAGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR GCA 90 bp GCTACTGAGCTAGCTTCCGTGCCTGAGAGGAAGGTCAAGGAAGGCTaGTGCTTCTTTGGTGCCAAGGAGACAGGATCTGCATGTGAAAGG +
Preference number: 1 (lower is better)
Translates to: ATELASVPERKVKEG*CFFGAKETGSACER
Trigger: CCTTTCACATGCAGATCCTGTCTCCTTGGCACCAAAGAAGCAGCAGCCTTCCTTGACCTTCCTCTCAGGCACGGAAGCTAGCTCAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR CCA 90 bp ACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTGTaGGGAATGGCTATGTCCAATGTATGTCAAGAAGTGGCGGAGTGG +
Preference number: 1 (lower is better)
Translates to: TLVQGSTSQAVQHLL*GMAMSNVCQEVAEW
Trigger: CCACTCCGCCACTTCTTGACATACATTGGACATAGCCATTCCCCACAGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR TCA 90 bp TTTGGTGCCAAGGAGACAGGATCTGCATGTGAAAGGGGCACTCTGTaGGCTGCTCTGAGCCATGGATCCAACCCCAGAGCTGGTAAGATA +
Preference number: 1 (lower is better)
Translates to: FGAKETGSACERGTL*AALSHGSNPRAGKI
Trigger: TATCTTACCAGCTCTGGGGTTGGATCCATGGCTCAGAGCAGCTCACAGAGTGCCCCTTTCACATGCAGATCCTGTCTCCTTGGCACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR TCA 90 bp GGGAATGACTCTTGTCAAGGTTTTATTGGTTTGGTGCATGTATGGTaGTGTTACAGAGTTGGAGCCCAGACCCCTCCAAGCTGCAGCTTC +
Preference number: 1 (lower is better)
Translates to: GNDSCQGFIGLVHVW*CYRVGAQTPPSCSF
Trigger: GAAGCTGCAGCTTGGAGGGGTCTGGGCTCCAACTCTGTAACATCACCATACATGCACCAAACCAATAAAACCTTGACAAGAGTCATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR-3UTR TCA 90 bp AGCAAGGGCCAGGCCAAGCCAACAATCAAGGTGTGCTCCGCTACTGAGCTAGCTGAAAGGGGCACTCTGTaGGCTGCTCTGAGCCATGGA +
Preference number: 2 (lower is better)
Translates to: SKGQAKPTIKVCSATELAERGTL*AALSHG
Trigger: TCCATGGCTCAGAGCAGCTCACAGAGTGCCCCTTTC...AGCTAGCTCAGTAGCGGAGCACACCTTGATTGTTGGCTTGGCCTGGCCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR-3UTR TCA 90 bp GCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTGTGGCTCTCTTGGGGCCCTTaGGGATTAGAGTTGTTTTCC +
Preference number: 2 (lower is better)
Translates to: APTLVQGSTSQAVQHLLWLSWGP*GLELFS
Trigger: GGAAAACAACTCTAATCCTCAAGGGCCCCAAGAGAG...CCACAGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR-3UTR GCA 90 bp ACTGAGCTAGCTTCCGTGCCTGAGAGGAAGGTCAAGGAAGGCTGCTGCTTCTTTGGGCACTCTGTGAGCTaGTCTGAGCCATGGATCCAA +
Preference number: 2 (lower is better)
Translates to: TELASVPERKVKEGCCFFGHSVS*SEPWIQ
Trigger: TTGGATCCATGGCTCAGAGCAGCTCACAGAGTGCCC...AAAGAAGCAGCAGCCTTCCTTGACCTTCCTCTCAGGCACGGAAGCTAGCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR-3UTR GCA 90 bp TTCAGCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTCTGCTGCTTCTTTGGTaGCAAGGAGACAGGATCTGC +
Preference number: 2 (lower is better)
Translates to: FSSNTGPRLNFPGCPASALLLLW*QGDRIC
Trigger: GCAGATCCTGTCTCCTTGGCACCAAAGAAGCAGCAG...AGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR-3UTR CCA 90 bp GGTGTTTATGTGTGTCTCCCGACACTAACGTCACCTGGAGGCCTTGGCATGTTCAGATACCAGTCTCCCTaGCCCTACCCTGGCAGGATA +
Preference number: 2 (lower is better)
Translates to: GVYVCLPTLTSPGGLGMFRYQSP*PYPGRI
Trigger: TATCCTGCCAGGGTAGGGCCAGGGAGACTGGTATCT...GAACATGCCAAGGCCTCCAGGTGACGTTAGTGTCGGGAGACACACATAAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR-3UTR TCA 90 bp CCGAAGGGTACAGAAACCCCATGGGATTCTATAACAGTGGAGAACATAGCAATAGCTAGCTTCCGTGCCTaGGAGGAAGGTCAAGGAAGG +
Preference number: 2 (lower is better)
Translates to: PKGTETPWDSITVENIAIASFRA*EEGQGR
Trigger: CCTTCCTTGACCTTCCTCTCAGGCACGGAAGCTAGC...TATTGCTATGTTCTCCACTGTTATAGAATCCCATGGGGTTTCTGTACCCTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR-3UTR CCA 90 bp CCGAAGGGTACAGAAACCCCATGGGATTCTATAACAGTGGAGAACATAGCAATAAAGGCCGAGTCCATCTaGGCCTTTCTGCCCACAGCT +
Preference number: 2 (lower is better)
Translates to: PKGTETPWDSITVENIAIKAESI*AFLPTA
Trigger: AGCTGTGGGCAGAAAGGCCCAGATGGACTCGGCCTT...TATTGCTATGTTCTCCACTGTTATAGAATCCCATGGGGTTTCTGTACCCTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR-3UTR GCA 90 bp TACAGAAACCCCATGGGATTCTATAACAGTGGAGAACATAGCAATACCCACTGCCCAACAATCAAGGTGTaGTCCGCTACTGAGCTAGCT +
Preference number: 2 (lower is better)
Translates to: YRNPMGFYNSGEHSNTHCPTIKV*SATELA
Trigger: AGCTAGCTCAGTAGCGGAGCACACCTTGATTGTTGG...GCAGTGGGTATTGCTATGTTCTCCACTGTTATAGAATCCCATGGGGTTTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR CCA 72 bp CAGAGCCTGCAGGGTCAAGAGAAGGCCGAGTCCATCTaGGCCTTTCTGCCCACAGCTTGCAGGGATGAGGTC +
Preference number: 3 (lower is better)
Translates to: QSLQGQEKAESI*AFLPTACRDEV
Trigger: GACCTCATCCCTGCAAGCTGTGGGCAGAAAGGCCCAGATGGACTCGGCCTTCTCTTGACCCTGCAGGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR GCA 72 bp GCAAGCAAGGGCCAGGCCAAGCCAACAATCAAGGTGTaGTCCGCTACTGAGCTAGCTTCCGTGCCTGAGAGG +
Preference number: 3 (lower is better)
Translates to: ASKGQAKPTIKV*SATELASVPER
Trigger: CCTCTCAGGCACGGAAGCTAGCTCAGTAGCGGAGCACACCTTGATTGTTGGCTTGGCCTGGCCCTTGCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR CCA 72 bp GATCCAACCCCAGAGCTGGTAAGATACCAGTCTCCCTaGCCCTACCCTGGCAGGATAAGGGTGTGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: DPTPELVRYQSP*PYPGRIRVCGQ
Trigger: CTGCCCACACACCCTTATCCTGCCAGGGTAGGGCCAGGGAGACTGGTATCTTACCAGCTCTGGGGTTGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR CCA 72 bp CAGCCCCATCCACAGCCTCCTCTAAGGCAGAGGCACTaGCAGAGAAGAGACTTGGGGAGAGGGAAGATATCA +
Preference number: 3 (lower is better)
Translates to: QPHPQPPLRQRH*QRRDLGRGKIS
Trigger: TGATATCTTCCCTCTCCCCAAGTCTCTTCTCTGCCAGTGCCTCTGCCTTAGAGGAGGCTGTGGATGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR-3UTR CAA 90 bp AGCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTGTGAAGGCTGCTGCTTCTTaGGTGCCAAGGAGACAGGAT +
Preference number: 3 (lower is better)
Translates to: SSNTGPRLNFPGCPASAVKAAAS*VPRRQD
Trigger: ATCCTGTCTCCTTGGCACCAAAGAAGCAGCAGCCTT...CACAGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR TCA 72 bp AAGGAGACAGGATCTGCATGTGAAAGGGGCACTCTGTaGGCTGCTCTGAGCCATGGATCCAACCCCAGAGCT +
Preference number: 3 (lower is better)
Translates to: KETGSACERGTL*AALSHGSNPRA
Trigger: AGCTCTGGGGTTGGATCCATGGCTCAGAGCAGCTCACAGAGTGCCCCTTTCACATGCAGATCCTGTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR TCA 72 bp CTGCTTCTTTGGTGCCAAGGAGACAGGATCTGCATGTaGAAGGGGCACTCTGTGAGCTGCTCTGAGCCATGG +
Preference number: 3 (lower is better)
Translates to: LLLWCQGDRICM*KGHSVSCSEPW
Trigger: CCATGGCTCAGAGCAGCTCACAGAGTGCCCCTTTCACATGCAGATCCTGTCTCCTTGGCACCAAAGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR GCA 72 bp GCTTCCGTGCCTGAGAGGAAGGTCAAGGAAGGCTGCTaGTTCTTTGGTGCCAAGGAGACAGGATCTGCATGT +
Preference number: 3 (lower is better)
Translates to: ASVPERKVKEGC*FFGAKETGSAC
Trigger: ACATGCAGATCCTGTCTCCTTGGCACCAAAGAAGCAGCAGCCTTCCTTGACCTTCCTCTCAGGCACGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR GCA 72 bp CTAGCTTCCGTGCCTGAGAGGAAGGTCAAGGAAGGCTaGTGCTTCTTTGGTGCCAAGGAGACAGGATCTGCA +
Preference number: 3 (lower is better)
Translates to: LASVPERKVKEG*CFFGAKETGSA
Trigger: TGCAGATCCTGTCTCCTTGGCACCAAAGAAGCAGCAGCCTTCCTTGACCTTCCTCTCAGGCACGGAAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR CCA 72 bp TGGTGTTTATGTGTGTCTCCCGACACTAACGTCACCTaGAGGCCTTGGCATGTTCCCTGCTTTCCTATGTGG +
Preference number: 3 (lower is better)
Translates to: WCLCVSPDTNVT*RPWHVPCFPMW
Trigger: CCACATAGGAAAGCAGGGAACATGCCAAGGCCTCCAGGTGACGTTAGTGTCGGGAGACACACATAAACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR-3UTR CAA 90 bp TTCAGCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTTCTCTCTTGGGGCCCTaGAGGATTAGAGTTGTTTTC +
Preference number: 3 (lower is better)
Translates to: FSSNTGPRLNFPGCPASASLLGP*RIRVVF
Trigger: GAAAACAACTCTAATCCTCAAGGGCCCCAAGAGAGA...AGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR CCA 72 bp CAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTGTaGGGAATGGCTATGTCCAATGTATGTCAAGAAGTG +
Preference number: 3 (lower is better)
Translates to: QGSTSQAVQHLL*GMAMSNVCQEV
Trigger: CACTTCTTGACATACATTGGACATAGCCATTCCCCACAGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR CCA 72 bp TGTGGGGAATGGCTATGTCCAATGTATGTCAAGAAGTaGCGGAGTGGATTGGAGGGTAGAGGGAAATCAGCT +
Preference number: 3 (lower is better)
Translates to: CGEWLCPMYVKK*RSGLEGRGKSA
Trigger: AGCTGATTTCCCTCTACCCTCCAATCCACTCCGCCACTTCTTGACATACATTGGACATAGCCATTCCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR TCA 72 bp TCTTGTCAAGGTTTTATTGGTTTGGTGCATGTATGGTaGTGTTACAGAGTTGGAGCCCAGACCCCTCCAAGC +
Preference number: 3 (lower is better)
Translates to: SCQGFIGLVHVW*CYRVGAQTPPS
Trigger: GCTTGGAGGGGTCTGGGCTCCAACTCTGTAACATCACCATACATGCACCAAACCAATAAAACCTTGACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR GCA 90 bp GCCCCAGCAGCCCCATCCACAGCCTCCTCTAAGGCAGAGGCACTGGCAGAGAAGGCTTTCTTCTCCTTCTaGTGGGAGAGCTTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: APAAPSTASSKAEALAEKAFFSF*WESFLR
Trigger: CCGCAGGAAGCTCTCCCAGCAGAAGGAGAAGAAAGC...CTTCTCTGCCAGTGCCTCTGCCTTAGAGGAGGCTGTGGATGGGGCTGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR TCA 90 bp TCCAACATAGGCAAGCAAGGGCCAGGCCAAGCCAACAATCAAGGTGTGCTCCGCTCCATTTCCAGCTCCTaGGCTCGGCGGGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: SNIGKQGPGQANNQGVLRSISSS*ARRAAS
Trigger: GGATGCTGCCCGCCGAGCTCAGGAGCTGGAAATGGA...GCGGAGCACACCTTGATTGTTGGCTTGGCCTGGCCCTTGCTTGCCTATGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR GCA 90 bp CAGGGTCAAGAGAAGGCCGAGTCCATCTGGGCCTTTCTGCCCACAGCTTGCAGGGGCCGGCTCCAGTTCTaGCTCTCCAGATCATCATCG +
Preference number: 4 (lower is better)
Translates to: QGQEKAESIWAFLPTACRGRLQF*LSRSSS
Trigger: CGATGATGATCTGGAGAGGCAGAACTGGAGCCGGCC...CCTGCAAGCTGTGGGCAGAAAGGCCCAGATGGACTCGGCCTTCTCTTGACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR TCA 90 bp TCCAACATAGGCAAGCAAGGGCCAGGCCAAGCCAACAATCAAGGTGTGCTCCGCTCCCTTCGGACCCATTaGAGGGCCGGCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SNIGKQGPGQANNQGVLRSLRTH*RAGSSS
Trigger: AGAACTGGAGCCGGCCCTTCAATGGGTCCGAAGGGA...GCGGAGCACACCTTGATTGTTGGCTTGGCCTGGCCCTTGCTTGCCTATGTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp CAGGGTCAAGAGAAGGCCGAGTCCATCTGGGCCTTTCTGCCCACAGCTTGCAGGCGTAGAACGAGACGATaGAGGAGTAGACCACGAAGG +
Preference number: 4 (lower is better)
Translates to: QGQEKAESIWAFLPTACRRRTRR*RSRPRR
Trigger: CCTTCGTGGTCTACTCCTCCATCGTCTCGTTCTACG...CCTGCAAGCTGTGGGCAGAAAGGCCCAGATGGACTCGGCCTTCTCTTGACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp GCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTGTGGGGCGCTGTAGAGGACTaGTGGGATGTTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: APTLVQGSTSQAVQHLLWGAVED*WDVAVT
Trigger: TGTGACTGCAACATCCCACCAGTCCTCTACAGCGCC...CCACAGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR TCA 90 bp ACTGAGCTAGCTTCCGTGCCTGAGAGGAAGGTCAAGGAAGGCTGCTGCTTCTTTATGGATCGGGGAGAGTaGGCTGGTGGTGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: TELASVPERKVKEGCCFFMDRGE*AGGDWE
Trigger: CTCCCAGTCACCACCAGCTCACTCTCCCCGATCCAT...AAAGAAGCAGCAGCCTTCCTTGACCTTCCTCTCAGGCACGGAAGCTAGCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR TCA 90 bp CAGGGTCAAGAGAAGGCCGAGTCCATCTGGGCCTTTCTGCCCACAGCTTGCAGGAGTGCAGGATCTTCATaGAGGCCTTGCGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: QGQEKAESIWAFLPTACRSAGSS*RPCGTQ
Trigger: TTGAGTTCCGCAAGGCCTTCATGAAGATCCTGCACT...CCTGCAAGCTGTGGGCAGAAAGGCCCAGATGGACTCGGCCTTCTCTTGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp CAGGGTCAAGAGAAGGCCGAGTCCATCTGGGCCTTTCTGCCCACAGCTTGCAGGTTCATGTCCTCAGGGTaGGTACAGTTGCCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: QGQEKAESIWAFLPTACRFMSSG*VQLPLS
Trigger: ACTCAAGGGCAACTGTACCCACCCTGAGGACATGAA...CCTGCAAGCTGTGGGCAGAAAGGCCCAGATGGACTCGGCCTTCTCTTGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp GGGGCACCGAGCCAAGCTAACACTGCAGAGCCTGCAGGGTCAAGAGAAGGCCGATCTCCGCCTGTTCACTaGGAAACTCCCATTAGACTT +
Preference number: 4 (lower is better)
Translates to: GAPSQANTAEPAGSREGRSPPVH*ETPIRL
Trigger: AAGTCTAATGGGAGTTTCCCAGTGAACAGGCGGAGA...TCGGCCTTCTCTTGACCCTGCAGGCTCTGCAGTGTTAGCTTGGCTCGGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp AGAGCCCCAAGTTACCACCTCCAACTTCAGCTCCAACACTGGTCCAAGGCTCAAGGTGACTGGGAGGGATaGGGCTATACCGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RAPSYHLQLQLQHWSKAQGDWEG*GYTGSS
Trigger: AGAGGACCCGGTATAGCCCCATCCCTCCCAGTCACC...TTGAGCCTTGGACCAGTGTTGGAGCTGAAGTTGGAGGTGGTAACTTGGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp AGCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTGTGTTCTTCTCCTTCTGCTaGGAGAGCTTCCTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SSNTGPRLNFPGCPASAVFFSFC*ESFLRL
Trigger: GAGCCGCAGGAAGCTCTCCCAGCAGAAGGAGAAGAA...CACAGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp GCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTGTGGTCAGGTAGTTGGTGGTaGTCTGCAAAGCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: APTLVQGSTSQAVQHLLWSGSWW*SAKPSL
Trigger: GAGAGAAGGCTTTGCAGACCACCACCAACTACCTGA...CCACAGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp GCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTGTGGGAGTCCAAAGAGCAGTaGGCAAGAGATGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: APTLVQGSTSQAVQHLLWESKEQ*ARDGEG
Trigger: TCCTTCACCATCTCTTGCCCACTGCTCTTTGGACTC...CCACAGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp CAGGGTCAAGAGAAGGCCGAGTCCATCTGGGCCTTTCTGCCCACAGCTTGCAGGATGCCCATTCTTTTCTaGTTTGGCAGGACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: QGQEKAESIWAFLPTACRMPILF*FGRTVR
Trigger: CCTGACAGTCCTGCCAAACCAGAAAAGAATGGGCAT...CCTGCAAGCTGTGGGCAGAAAGGCCCAGATGGACTCGGCCTTCTCTTGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp GCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTGTGGTCCGGGTTTTGCCATTaGGCATGGTCTGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: APTLVQGSTSQAVQHLLWSGFCH*AWSGSQ
Trigger: TTGAGATCCAGACCATGCCCAATGGCAAAACCCGGA...CCACAGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR GCA 90 bp AGCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTGTGCTCTGGATACAGCCATaGACACCAGCACATTGCCAA +
Preference number: 4 (lower is better)
Translates to: SSNTGPRLNFPGCPASAVLWIQP*TPAHCQ
Trigger: TTGGCAATGTGCTGGTGTGCATGGCTGTATCCAGAG...CACAGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR CAA 72 bp TGCCTGAGAGGAAGGTCAAGGAAGGCTGCTGCTTCTTaGGTGCCAAGGAGACAGGATCTGCATGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: CLRGRSRKAAAS*VPRRQDLHVKG
Trigger: CCCTTTCACATGCAGATCCTGTCTCCTTGGCACCAAAGAAGCAGCAGCCTTCCTTGACCTTCCTCTCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR TCA 90 bp TTCAGCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTTGTACCTGTCGATGCTaGTGGCACACAGGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: FSSNTGPRLNFPGCPASACTCRC*WHTGSR
Trigger: TCTTGAACCTGTGTGCCATCAGCATCGACAGGTACA...AGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp TCCGTGCCTGAGAGGAAGGTCAAGGAAGGCTGCTGCTTCTTTGGTGCCAAGGAGCATTCTTTTCTGGTTTaGCAGGACTGTCAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: SVPERKVKEGCCFFGAKEHSFLV*QDCQGC
Trigger: GCAACCCTGACAGTCCTGCCAAACCAGAAAAGAATG...CTCCTTGGCACCAAAGAAGCAGCAGCCTTCCTTGACCTTCCTCTCAGGCACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp CTGAGAGGAAGGTCAAGGAAGGCTGCTGCTTCTTTGGTGCCAAGGAGACAGGATGCTGTAGAGGACTGGTaGGATGTTGCAGTCACAGTG +
Preference number: 4 (lower is better)
Translates to: LRGRSRKAAASLVPRRQDAVEDW*DVAVTV
Trigger: CACTGTGACTGCAACATCCCACCAGTCCTCTACAGC...ATCCTGTCTCCTTGGCACCAAAGAAGCAGCAGCCTTCCTTGACCTTCCTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR GCA 90 bp TCCGTGCCTGAGAGGAAGGTCAAGGAAGGCTGCTGCTTCTTTGGTGCCAAGGAGGGACTGGTGGGATGTTaGAGTCACAGTGTATATTCA +
Preference number: 4 (lower is better)
Translates to: SVPERKVKEGCCFFGAKEGLVGC*SHSVYS
Trigger: TGAATATACACTGTGACTGCAACATCCCACCAGTCC...CTCCTTGGCACCAAAGAAGCAGCAGCCTTCCTTGACCTTCCTCTCAGGCACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp GGTGTTTATGTGTGTCTCCCGACACTAACGTCACCTGGAGGCCTTGGCATGTTCCCATTGGGCATGGTCTaGATCTCAAAGAACTTGGCA +
Preference number: 4 (lower is better)
Translates to: GVYVCLPTLTSPGGLGMFPLGMV*ISKNLA
Trigger: TGCCAAGTTCTTTGAGATCCAGACCATGCCCAATGG...GAACATGCCAAGGCCTCCAGGTGACGTTAGTGTCGGGAGACACACATAAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR GCA 90 bp TACAGAAACCCCATGGGATTCTATAACAGTGGAGAACATAGCAATACCCACTGCGGGAGGTCCGGGTTTTaGCATTGGGCATGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: YRNPMGFYNSGEHSNTHCGRSGF*HWAWSG
Trigger: TCCAGACCATGCCCAATGGCAAAACCCGGACCTCCC...GCAGTGGGTATTGCTATGTTCTCCACTGTTATAGAATCCCATGGGGTTTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp TCCGTGCCTGAGAGGAAGGTCAAGGAAGGCTGCTGCTTCTTTGGTGCCAAGGAGATGATACACTCATTCTaGTCTGTGTTGTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SVPERKVKEGCCFFGAKEMIHSF*SVLLSP
Trigger: TGGACTCAACAACACAGACCAGAATGAGTGTATCAT...CTCCTTGGCACCAAAGAAGCAGCAGCCTTCCTTGACCTTCCTCTCAGGCACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp CTGAGAGGAAGGTCAAGGAAGGCTGCTGCTTCTTTGGTGCCAAGGAGACAGGATACACACCAAGAACAATaGCAAGCATCTGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LRGRSRKAAASLVPRRQDTHQEQ*QASEWL
Trigger: AAGCCACTCAGATGCTTGCCATTGTTCTTGGTGTGT...ATCCTGTCTCCTTGGCACCAAAGAAGCAGCAGCCTTCCTTGACCTTCCTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR TCA 90 bp ACTGAGCTAGCTTCCGTGCCTGAGAGGAAGGTCAAGGAAGGCTGCTGCTTCTTTACAAAGATGTCACAGTaGATCCTGCTGAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: TELASVPERKVKEGCCFFTKMSQ*ILLNFH
Trigger: GTGGAAATTCAGCAGGATTCACTGTGACATCTTTGT...AAAGAAGCAGCAGCCTTCCTTGACCTTCCTCTCAGGCACGGAAGCTAGCTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp TACAGAAACCCCATGGGATTCTATAACAGTGGAGAACATAGCAATACCCACTGCCTATGTAGACCGTGGTaGGATGGATCGGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: YRNPMGFYNSGEHSNTHCLCRPW*DGSGRV
Trigger: CACTCTCCCCGATCCATCCCACCACGGTCTACATAG...GCAGTGGGTATTGCTATGTTCTCCACTGTTATAGAATCCCATGGGGTTTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp AGAGCCCCAAGTTACCACCTCCAACTTCAGCTCCAACACTGGTCCAAGGCTCAATTTTGCCATTGGGCATaGTCTGGATCTCAAAGAACT +
Preference number: 4 (lower is better)
Translates to: RAPSYHLQLQLQHWSKAQFCHWA*SGSQRT
Trigger: AGTTCTTTGAGATCCAGACCATGCCCAATGGCAAAA...TTGAGCCTTGGACCAGTGTTGGAGCTGAAGTTGGAGGTGGTAACTTGGGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR TCA 90 bp CCGAAGGGTACAGAAACCCCATGGGATTCTATAACAGTGGAGAACATAGCAATACACAGTGAATCCTGCTaGATTTCCACTCACCCACCA +
Preference number: 4 (lower is better)
Translates to: PKGTETPWDSITVENIAIHSESC*ISTHPP
Trigger: TGGTGGGTGAGTGGAAATTCAGCAGGATTCACTGTG...TATTGCTATGTTCTCCACTGTTATAGAATCCCATGGGGTTTCTGTACCCTTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR TCA 90 bp CCGAAGGGTACAGAAACCCCATGGGATTCTATAACAGTGGAGAACATAGCAATAAGGCAGGGTTGGCAATaGTACACTCATTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PKGTETPWDSITVENIAIRQGWQ*YTHSGL
Trigger: CAGACCAGAATGAGTGTATCATTGCCAACCCTGCCT...TATTGCTATGTTCTCCACTGTTATAGAATCCCATGGGGTTTCTGTACCCTTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CCA 90 bp TACAGAAACCCCATGGGATTCTATAACAGTGGAGAACATAGCAATACCCACTGCCTATCAGGTAGTTGGTaGTGGTCTGCAAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: YRNPMGFYNSGEHSNTHCLSGSW*WSAKPS
Trigger: AGAAGGCTTTGCAGACCACCACCAACTACCTGATAG...GCAGTGGGTATTGCTATGTTCTCCACTGTTATAGAATCCCATGGGGTTTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR GCA 90 bp TACAGAAACCCCATGGGATTCTATAACAGTGGAGAACATAGCAATACCCACTGCCAGGTTCAAGATGCTTaGTGTGCACATCATGACATC +
Preference number: 4 (lower is better)
Translates to: YRNPMGFYNSGEHSNTHCQVQDA*CAHHDI
Trigger: GATGTCATGATGTGCACAGCAAGCATCTTGAACCTG...GCAGTGGGTATTGCTATGTTCTCCACTGTTATAGAATCCCATGGGGTTTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
3UTR CAA 72 bp CTATGTCCAATGTATGTCAAGAAGTGGCGGAGTGGATaGGAGGGTAGAGGGAAATCAGCTATTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LCPMYVKKWRSG*EGRGKSAIFLF
Trigger: AAAGAGAAAAATAGCTGATTTCCCTCTACCCTCCAATCCACTCCGCCACTTCTTGACATACATTGGACATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp CAGGGTCAAGAGAAGGCCGAGTCCATCTGGGCCTTTCTGCCCACAGCTTGCAGGAGGGAGGTCCGGGTTTaGCCATTGGGCATGGTCTGG +
Preference number: 5 (lower is better)
Translates to: QGQEKAESIWAFLPTACRREVRV*PLGMVW
Trigger: CCAGACCATGCCCAATGGCAAAACCCGGACCTCCCT...CCTGCAAGCTGTGGGCAGAAAGGCCCAGATGGACTCGGCCTTCTCTTGACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CCA 90 bp GAGGAGGGTGAGCAGCATGGCATAGTAGTTGTAGTGGGGCCTGTCTaGCTTCCCTTCGGACCCATTGAAGGGCCGGCTCCAGTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: EEGEQHGIVVVVGPV*LPFGPIEGPAPVLP
Trigger: AGGCAGAACTGGAGCCGGCCCTTCAATGGGTCCGAAGGGAAGCCAGACAGGCCCCACTACAACTACTATGCCATGCTGCTCACCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp TCCAACATAGGCAAGCAAGGGCCAGGCCAAGCCAACAATCAAGGTGTGCTCCGCGCTCGGCTGCTACGCTaGGTGTTGACCCGCTTCCGA +
Preference number: 5 (lower is better)
Translates to: SNIGKQGPGQANNQGVLRARLLR*VLTRFR
Trigger: TCGGAAGCGGGTCAACACCAAGCGTAGCAGCCGAGC...GCGGAGCACACCTTGATTGTTGGCTTGGCCTGGCCCTTGCTTGCCTATGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp AGCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTGTGTTCCCTTCGGACCCATaGAAGGGCCGGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: SSNTGPRLNFPGCPASAVFPSDP*KGRLQF
Trigger: GAACTGGAGCCGGCCCTTCAATGGGTCCGAAGGGAA...CACAGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS GCA 90 bp CTGTCTGGCTTCCCTTCGGACCCATTGAAGGGCCGGCTCCAGTTCTaGCTCTCCAGATCATCATCGTACCAGGACAGGTTCAGTGGATCC +
Preference number: 5 (lower is better)
Translates to: LSGFPSDPLKGRLQF*LSRSSSYQDRFSGS
Trigger: GGATCCACTGAACCTGTCCTGGTACGATGATGATCTGGAGAGGCAGAACTGGAGCCGGCCCTTCAATGGGTCCGAAGGGAAGCCAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS TCA 90 bp CATAGTAGTTGTAGTGGGGCCTGTCTGGCTTCCCTTCGGACCCATTaGAGGGCCGGCTCCAGTTCTGCCTCTCCAGATCATCATCGTACC +
Preference number: 5 (lower is better)
Translates to: HSSCSGACLASLRTH*RAGSSSASPDHHRT
Trigger: GGTACGATGATGATCTGGAGAGGCAGAACTGGAGCCGGCCCTTCAATGGGTCCGAAGGGAAGCCAGACAGGCCCCACTACAACTACTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp GGGGCACCGAGCCAAGCTAACACTGCAGAGCCTGCAGGGTCAAGAGAAGGCCGACTGGGATTGACAATCTaGGCATGCCCATTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: GAPSQANTAEPAGSREGRLGLTI*ACPFFS
Trigger: AGAAAAGAATGGGCATGCCAAGATTGTCAATCCCAG...TCGGCCTTCTCTTGACCCTGCAGGCTCTGCAGTGTTAGCTTGGCTCGGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp AGCAAGGGCCAGGCCAAGCCAACAATCAAGGTGTGCTCCGCTACTGAGCTAGCTACCACGAAGGCAGGGTaGGCAATGATACACTCATTC +
Preference number: 5 (lower is better)
Translates to: SKGQAKPTIKVCSATELATTKAG*AMIHSF
Trigger: GAATGAGTGTATCATTGCCAACCCTGCCTTCGTGGT...AGCTAGCTCAGTAGCGGAGCACACCTTGATTGTTGGCTTGGCCTGGCCCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp CAGGGTCAAGAGAAGGCCGAGTCCATCTGGGCCTTTCTGCCCACAGCTTGCAGGATCTTCATGAAGGCCTaGCGGAACTCAATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: QGQEKAESIWAFLPTACRIFMKA*RNSMLK
Trigger: CTTCAACATTGAGTTCCGCAAGGCCTTCATGAAGAT...CCTGCAAGCTGTGGGCAGAAAGGCCCAGATGGACTCGGCCTTCTCTTGACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CCA 90 bp CAGCTCCTGAGCTCGGCGGGCAGCATCCATTCTCCGCCTGTTCACTaGGAAACTCCCATTAGACTTCATGATAACGGTGCAGAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: QLLSSAGSIHSPPVH*ETPIRLHDNGAEFH
Trigger: ATGAAACTCTGCACCGTTATCATGAAGTCTAATGGGAGTTTCCCAGTGAACAGGCGGAGAATGGATGCTGCCCGCCGAGCTCAGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp TTCAGCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTCCATTCTTTTCTGGTTaGGCAGGACTGTCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: FSSNTGPRLNFPGCPASAPFFSG*AGLSGL
Trigger: CAACCCTGACAGTCCTGCCAAACCAGAAAAGAATGG...AGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp GGTGTTTATGTGTGTCTCCCGACACTAACGTCACCTGGAGGCCTTGGCATGTTCTTCTGGTCTGTGTTGTaGAGTCCAAAGAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GVYVCLPTLTSPGGLGMFFWSVL*SPKSSG
Trigger: CCCACTGCTCTTTGGACTCAACAACACAGACCAGAA...GAACATGCCAAGGCCTCCAGGTGACGTTAGTGTCGGGAGACACACATAAACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp AGCTCCAACACTGGTCCAAGGCTCAACTTCCCAGGCTGTCCAGCATCTGCTGTGTCATTCTGGTCTGTGTaGTTGAGTCCAAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: SSNTGPRLNFPGCPASAVSFWSV*LSPKSS
Trigger: ACTGCTCTTTGGACTCAACAACACAGACCAGAATGA...CACAGCAGATGCTGGACAGCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp AGAGCCCCAAGTTACCACCTCCAACTTCAGCTCCAACACTGGTCCAAGGCTCAAAGGACTGGTGGGATGTaGCAGTCACAGTGTATATTC +
Preference number: 5 (lower is better)
Translates to: RAPSYHLQLQLQHWSKAQRTGGM*QSQCIF
Trigger: GAATATACACTGTGACTGCAACATCCCACCAGTCCT...TTGAGCCTTGGACCAGTGTTGGAGCTGAAGTTGGAGGTGGTAACTTGGGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CCA 90 bp CTCATCGTCTTAAGGGAGGTCCGGGTTTTGCCATTGGGCATGGTCTaGATCTCAAAGAACTTGGCAATCCTGGGATTGACAATCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LIVLREVRVLPLGMV*ISKNLAILGLTILA
Trigger: TGCCAAGATTGTCAATCCCAGGATTGCCAAGTTCTTTGAGATCCAGACCATGCCCAATGGCAAAACCCGGACCTCCCTTAAGACGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CCA 90 bp CCATTAGACTTCATGATAACGGTGCAGAGTTTCATGTCCTCAGGGTaGGTACAGTTGCCCTTGAGTGGTGTCTTCAGGTTGGCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: PLDFMITVQSFMSSG*VQLPLSGVFRLALK
Trigger: TTTCAGAGCCAACCTGAAGACACCACTCAAGGGCAACTGTACCCACCCTGAGGACATGAAACTCTGCACCGTTATCATGAAGTCTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp CCGAAGGGTACAGAAACCCCATGGGATTCTATAACAGTGGAGAACATAGCAATAAGTGGTGTCTTCAGGTaGGCTCTGAAAGCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: PKGTETPWDSITVENIAISGVFR*ALKARL
Trigger: CAGCCGAGCTTTCAGAGCCAACCTGAAGACACCACT...TATTGCTATGTTCTCCACTGTTATAGAATCCCATGGGGTTTCTGTACCCTTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp TACAGAAACCCCATGGGATTCTATAACAGTGGAGAACATAGCAATACCCACTGCTCAGGGTGGGTACAGTaGCCCTTGAGTGGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: YRNPMGFYNSGEHSNTHCSGWVQ*PLSGVF
Trigger: GAAGACACCACTCAAGGGCAACTGTACCCACCCTGA...GCAGTGGGTATTGCTATGTTCTCCACTGTTATAGAATCCCATGGGGTTTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp TATGTCAAGAAGTGGCGGAGTGGATTGGAGGGTAGAGGGAAATCAGCTATTTTTGTCCGGGTTTTGCCATaGGGCATGGTCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: YVKKWRSGLEGRGKSAIFVRVLP*GMVWIS
Trigger: TGAGATCCAGACCATGCCCAATGGCAAAACCCGGAC...AAAAATAGCTGATTTCCCTCTACCCTCCAATCCACTCCGCCACTTCTTGACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS TCA 90 bp CATTGGGCATGGTCTGGATCTCAAAGAACTTGGCAATCCTGGGATTaGCAATCTTGGCATGCCCATTCTTTTCTGGTTTGGCAGGACTGT +
Preference number: 5 (lower is better)
Translates to: HWAWSGSQRTWQSWD*QSWHAHSFLVWQDC
Trigger: ACAGTCCTGCCAAACCAGAAAAGAATGGGCATGCCAAGATTGTCAATCCCAGGATTGCCAAGTTCTTTGAGATCCAGACCATGCCCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS GCA 90 bp TGGATCTCAAAGAACTTGGCAATCCTGGGATTGACAATCTTGGCATaGCCATTCTTTTCTGGTTTGGCAGGACTGTCAGGGTTGCTATGT +
Preference number: 5 (lower is better)
Translates to: WISKNLAILGLTILA*PFFSGLAGLSGLLC
Trigger: ACATAGCAACCCTGACAGTCCTGCCAAACCAGAAAAGAATGGGCATGCCAAGATTGTCAATCCCAGGATTGCCAAGTTCTTTGAGATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS-3UTR CAA 90 bp TACAGAAACCCCATGGGATTCTATAACAGTGGAGAACATAGCAATACCCACTGCTGGATCTCAAAGAACTaGGCAATCCTGGGATTGACA +
Preference number: 5 (lower is better)
Translates to: YRNPMGFYNSGEHSNTHCWISKN*AILGLT
Trigger: TGTCAATCCCAGGATTGCCAAGTTCTTTGAGATCCA...GCAGTGGGTATTGCTATGTTCTCCACTGTTATAGAATCCCATGGGGTTTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS TCA 72 bp GGGCTGGTGCTTGACAGCATCTCCATTTCCAGCTCCTaGGCTCGGCGGGCAGCATCCATTCTCCGCCTGTTC +
Preference number: 6 (lower is better)
Translates to: GLVLDSISISSS*ARRAASILRLF
Trigger: GAACAGGCGGAGAATGGATGCTGCCCGCCGAGCTCAGGAGCTGGAAATGGAGATGCTGTCAAGCACCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS TCA 72 bp TGCTATGTAGACCGTGGTGGGATGGATCGGGGAGAGTaGGCTGGTGGTGACTGGGAGGGATGGGGCTATACC +
Preference number: 6 (lower is better)
Translates to: CYVDRGGMDRGE*AGGDWEGWGYT
Trigger: GGTATAGCCCCATCCCTCCCAGTCACCACCAGCTCACTCTCCCCGATCCATCCCACCACGGTCTACATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CCA 72 bp GAGCAGCATGGCATAGTAGTTGTAGTGGGGCCTGTCTaGCTTCCCTTCGGACCCATTGAAGGGCCGGCTCCA +
Preference number: 6 (lower is better)
Translates to: EQHGIVVVVGPV*LPFGPIEGPAP
Trigger: TGGAGCCGGCCCTTCAATGGGTCCGAAGGGAAGCCAGACAGGCCCCACTACAACTACTATGCCATGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CAA 72 bp GTCTTCAGGTTGGCTCTGAAAGCTCGGCTGCTACGCTaGGTGTTGACCCGCTTCCGACGCTTGCGGAGAACG +
Preference number: 6 (lower is better)
Translates to: VFRLALKARLLR*VLTRFRRLRRT
Trigger: CGTTCTCCGCAAGCGTCGGAAGCGGGTCAACACCAAGCGTAGCAGCCGAGCTTTCAGAGCCAACCTGAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CAA 72 bp GGGTGGGTACAGTTGCCCTTGAGTGGTGTCTTCAGGTaGGCTCTGAAAGCTCGGCTGCTACGCTTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: GWVQLPLSGVFR*ALKARLLRLVL
Trigger: CAACACCAAGCGTAGCAGCCGAGCTTTCAGAGCCAACCTGAAGACACCACTCAAGGGCAACTGTACCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS GCA 72 bp GCCCATTCTTTTCTGGTTTGGCAGGACTGTCAGGGTTaGTATGTAGACCGTGGTGGGATGGATCGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: AHSFLVWQDCQG*YVDRGGMDRGE
Trigger: CTCTCCCCGATCCATCCCACCACGGTCTACATAGCAACCCTGACAGTCCTGCCAAACCAGAAAAGAATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CAA 90 bp TGGGAGAGCTTCCTGCGGCTCATCGTCTTAAGGGAGGTCCGGGTTTaGCCATTGGGCATGGTCTGGATCTCAAAGAACTTGGCAATCCTG +
Preference number: 6 (lower is better)
Translates to: WESFLRLIVLREVRV*PLGMVWISKNLAIL
Trigger: CAGGATTGCCAAGTTCTTTGAGATCCAGACCATGCCCAATGGCAAAACCCGGACCTCCCTTAAGACGATGAGCCGCAGGAAGCTCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CCA 72 bp AGCTCGGCGGGCAGCATCCATTCTCCGCCTGTTCACTaGGAAACTCCCATTAGACTTCATGATAACGGTGCA +
Preference number: 6 (lower is better)
Translates to: SSAGSIHSPPVH*ETPIRLHDNGA
Trigger: TGCACCGTTATCATGAAGTCTAATGGGAGTTTCCCAGTGAACAGGCGGAGAATGGATGCTGCCCGCCGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CAA 90 bp AGCTTCCTGCGGCTCATCGTCTTAAGGGAGGTCCGGGTTTTGCCATaGGGCATGGTCTGGATCTCAAAGAACTTGGCAATCCTGGGATTG +
Preference number: 6 (lower is better)
Translates to: SFLRLIVLREVRVLP*GMVWISKNLAILGL
Trigger: CAATCCCAGGATTGCCAAGTTCTTTGAGATCCAGACCATGCCCAATGGCAAAACCCGGACCTCCCTTAAGACGATGAGCCGCAGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CAA 72 bp TTCCTGCGGCTCATCGTCTTAAGGGAGGTCCGGGTTTaGCCATTGGGCATGGTCTGGATCTCAAAGAACTTG +
Preference number: 6 (lower is better)
Translates to: FLRLIVLREVRV*PLGMVWISKNL
Trigger: CAAGTTCTTTGAGATCCAGACCATGCCCAATGGCAAAACCCGGACCTCCCTTAAGACGATGAGCCGCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CAA 90 bp GCAATCCTGGGATTGACAATCTTGGCATGCCCATTCTTTTCTGGTTaGGCAGGACTGTCAGGGTTGCTATGTAGACCGTGGTGGGATGGA +
Preference number: 6 (lower is better)
Translates to: AILGLTILACPFFSG*AGLSGLLCRPWWDG
Trigger: TCCATCCCACCACGGTCTACATAGCAACCCTGACAGTCCTGCCAAACCAGAAAAGAATGGGCATGCCAAGATTGTCAATCCCAGGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CCA 72 bp CTCATTCTGGTCTGTGTTGTTGAGTCCAAAGAGCAGTaGGCAAGAGATGGTGAAGGACAGGACCCAGACAAT +
Preference number: 6 (lower is better)
Translates to: LILVCVVESKEQ*ARDGEGQDPDN
Trigger: ATTGTCTGGGTCCTGTCCTTCACCATCTCTTGCCCACTGCTCTTTGGACTCAACAACACAGACCAGAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CCA 72 bp ACCACGAAGGCAGGGTTGGCAATGATACACTCATTCTaGTCTGTGTTGTTGAGTCCAAAGAGCAGTGGGCAA +
Preference number: 6 (lower is better)
Translates to: TTKAGLAMIHSF*SVLLSPKSSGQ
Trigger: TTGCCCACTGCTCTTTGGACTCAACAACACAGACCAGAATGAGTGTATCATTGCCAACCCTGCCTTCGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CCA 72 bp TTAAGGGAGGTCCGGGTTTTGCCATTGGGCATGGTCTaGATCTCAAAGAACTTGGCAATCCTGGGATTGACA +
Preference number: 6 (lower is better)
Translates to: LREVRVLPLGMV*ISKNLAILGLT
Trigger: TGTCAATCCCAGGATTGCCAAGTTCTTTGAGATCCAGACCATGCCCAATGGCAAAACCCGGACCTCCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CAA 72 bp GGATTGACAATCTTGGCATGCCCATTCTTTTCTGGTTaGGCAGGACTGTCAGGGTTGCTATGTAGACCGTGG +
Preference number: 6 (lower is better)
Translates to: GLTILACPFFSG*AGLSGLLCRPW
Trigger: CCACGGTCTACATAGCAACCCTGACAGTCCTGCCAAACCAGAAAAGAATGGGCATGCCAAGATTGTCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CAA 90 bp CCATTGGGCATGGTCTGGATCTCAAAGAACTTGGCAATCCTGGGATaGACAATCTTGGCATGCCCATTCTTTTCTGGTTTGGCAGGACTG +
Preference number: 6 (lower is better)
Translates to: PLGMVWISKNLAILG*TILACPFFSGLAGL
Trigger: CAGTCCTGCCAAACCAGAAAAGAATGGGCATGCCAAGATTGTCAATCCCAGGATTGCCAAGTTCTTTGAGATCCAGACCATGCCCAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS GCA 72 bp AAGAACTTGGCAATCCTGGGATTGACAATCTTGGCATaGCCATTCTTTTCTGGTTTGGCAGGACTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: KNLAILGLTILA*PFFSGLAGLSG
Trigger: CCCTGACAGTCCTGCCAAACCAGAAAAGAATGGGCATGCCAAGATTGTCAATCCCAGGATTGCCAAGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CAA 90 bp ATGGTCTGGATCTCAAAGAACTTGGCAATCCTGGGATTGACAATCTaGGCATGCCCATTCTTTTCTGGTTTGGCAGGACTGTCAGGGTTG +
Preference number: 6 (lower is better)
Translates to: MVWISKNLAILGLTI*ACPFFSGLAGLSGL
Trigger: CAACCCTGACAGTCCTGCCAAACCAGAAAAGAATGGGCATGCCAAGATTGTCAATCCCAGGATTGCCAAGTTCTTTGAGATCCAGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS TCA 72 bp TGGTCTGGATCTCAAAGAACTTGGCAATCCTGGGATTaGCAATCTTGGCATGCCCATTCTTTTCTGGTTTGG +
Preference number: 6 (lower is better)
Translates to: WSGSQRTWQSWD*QSWHAHSFLVW
Trigger: CCAAACCAGAAAAGAATGGGCATGCCAAGATTGTCAATCCCAGGATTGCCAAGTTCTTTGAGATCCAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CAA 72 bp ATCTCAAAGAACTTGGCAATCCTGGGATTGACAATCTaGGCATGCCCATTCTTTTCTGGTTTGGCAGGACTG +
Preference number: 6 (lower is better)
Translates to: ISKNLAILGLTI*ACPFFSGLAGL
Trigger: CAGTCCTGCCAAACCAGAAAAGAATGGGCATGCCAAGATTGTCAATCCCAGGATTGCCAAGTTCTTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8
CDS CAA 72 bp ATGGTCTGGATCTCAAAGAACTTGGCAATCCTGGGATaGACAATCTTGGCATGCCCATTCTTTTCTGGTTTG +
Preference number: 6 (lower is better)
Translates to: MVWISKNLAILG*TILACPFFSGL
Trigger: CAAACCAGAAAAGAATGGGCATGCCAAGATTGTCAATCCCAGGATTGCCAAGTTCTTTGAGATCCAGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075764.8