Pregenerated sensors for DRD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021478Ensembl transcript IDs: ENSMUST00000021932.6, ENSMUST00000221470.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAACCAGCGATGAGCCCAACTATCGGAGGGGCTGCTGTGACCTGTaGCTTTACAGCTCATTCACCTCGATGCACATCTTAATCCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: RTSDEPNYRRGCCDL*LYSSFTSMHILILD Trigger: GTCCAGGATTAAGATGTGCATCGAGGTGAATGAGCTGTAAAGTCACAGGTCACAGCAGCCCCTCCGATAGTTGGGCTCATCGCTGGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR CCA 90 bp | AAGTCATTTCCCTTGTGGCTAGAGAATACACTGGAGTCAGTGAGTTaGAGAAGTTCTGTAACTGTCCAAAAGCAGCAGAGGGGTCTCGTG | + |
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Preference number: 1 (lower is better) Translates to: KSFPLWLENTLESVS*RSSVTVQKQQRGLV Trigger: CACGAGACCCCTCTGCTGCTTTTGGACAGTTACAGAACTTCTCCAACTCACTGACTCCAGTGTATTCTCTAGCCACAAGGGAAATGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR GCA 90 bp | TTTATTTGTGTCTGTGTTGAGTTAAGGAACCACCACATCAGCCTTTaGTGCCTTCCCAGAAGTCATTCCCAGCTCAGAATCTCAGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: FICVCVELRNHHISL*CLPRSHSQLRISES Trigger: AGACTCTGAGATTCTGAGCTGGGAATGACTTCTGGGAAGGCAGCAAAGGCTGATGTGGTGGTTCCTTAACTCAACACAGACACAAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR GCA 90 bp | CTGTTAGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTaGAGCTGCTTCCAAAGAACACCTTGTAAACATTTCAAACAACAA | + |
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Preference number: 1 (lower is better) Translates to: LLASQSALPSVLSTC*SCFQRTPCKHFKQQ Trigger: TTGTTGTTTGAAATGTTTACAAGGTGTTCTTTGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCTAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR CCA 90 bp | GATAATGCTTCAAAAAGGATTTCAGAGCCTAAGTCATTTCCCTTGTaGCTAGAGAATACACTGGAGTCAGTGAGTTGGAGAAGTTCTGTA | + |
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Preference number: 1 (lower is better) Translates to: DNASKRISEPKSFPL*LENTLESVSWRSSV Trigger: TACAGAACTTCTCCAACTCACTGACTCCAGTGTATTCTCTAGCCACAAGGGAAATGACTTAGGCTCTGAAATCCTTTTTGAAGCATTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAGGCTGCTGTGACCTGTaGCTTTACAGCTCATTCACC | + |
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Preference number: 2 (lower is better) Translates to: SKPVSPSFSSIHMLQLLPGCCDL*LYSSFT Trigger: GGTGAATGAGCTGTAAAGTCACAGGTCACAGCAGCC...TGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR TCA 90 bp | ATACTGTTAGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTCGGAGGGGCTGCTGTaGCCTGTGACTTTACAGCTC | + |
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Preference number: 2 (lower is better) Translates to: ILLASQSALPSVLSTCCSSEGLL*PVTLQL Trigger: GAGCTGTAAAGTCACAGGTCACAGCAGCCCCTCCGA...GCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCTAACAGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAATGCTGATGGCTTTGTaGTGCTCAACACACACCGGG | + |
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Preference number: 2 (lower is better) Translates to: SKPVSPSFSSIHMLQLLPMLMAL*CSTHTG Trigger: CCCGGTGTGTGTTGAGCATCACAAAGCCATCAGCAT...TGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR GCA 90 bp | ATACTGTTAGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCCACCACATCAGCCTTTaGTGCCTTCCCAGAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: ILLASQSALPSVLSTCCSHHISL*CLPRSH Trigger: ATGACTTCTGGGAAGGCAGCAAAGGCTGATGTGGTG...GCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCTAACAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAGTTTTAGCACCTGTTTaGATACAGCAAACAACTCTC | + |
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Preference number: 2 (lower is better) Translates to: SKPVSPSFSSIHMLQLLPVLAPV*IQQTTL Trigger: GAGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAAC...TGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR GCA 90 bp | ATACTGTTAGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCCTCGGGGAAAGCCTCTaGCATTTAAAACATTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ILLASQSALPSVLSTCCSLGESL*HLKHSE Trigger: TTCTGAATGTTTTAAATGGCAGAGGCTTTCCCCGAG...GCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCTAACAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR TCA 90 bp | ATACTGTTAGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCCCTTCCTGGAAAGTTTaGTTTTTAAGTGAAGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: ILLASQSALPSVLSTCCSPSWKV*FLSEAV Trigger: AACAGCTTCACTTAAAAATCAAACTTTCCAGGAAGG...GCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCTAACAGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR GCA 90 bp | ATACTGTTAGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCAAGAAATCCCACTCTTaGTGTAAGGCTCAATTATTG | + |
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Preference number: 2 (lower is better) Translates to: ILLASQSALPSVLSTCCSKKSHS*CKAQLL Trigger: CAATAATTGAGCCTTACAGCAAGAGTGGGATTTCTT...GCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCTAACAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCATTGGTAGTGTTAGTCACTTCTTACCTTGTGTTTATTTGTGTCTGTGTCACCACATCAGCCTTTaGTGCCTTCCCAGAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: QSIGSVSHFLPCVYLCLCHHISL*CLPRSH Trigger: ATGACTTCTGGGAAGGCAGCAAAGGCTGATGTGGTG...ACACAGACACAAATAAACACAAGGTAAGAAGTGACTAACACTACCAATGCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGTCACTTCTTACCTTGTGTTTATTTGTGTCTGTGTTGAGTTAAGGAACCACCACATCAGCCTTTGCTaGCTTCCCAGAAGTCATTCC | + |
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Preference number: 2 (lower is better) Translates to: LVTSYLVFICVCVELRNHHISLC*LPRSHS Trigger: GGAATGACTTCTGGGAAGGCAGCAAAGGCTGATGTG...GTGGTTCCTTAACTCAACACAGACACAAATAAACACAAGGTAAGAAGTGACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR GCA 90 bp | GATGCACATCTTAATCCTGGACAGTCATTTGTTTGTTTCAGAAAGCCATTTCAACACATCAGCCTTTGCTaGCTTCCCAGAAGTCATTCC | + |
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Preference number: 2 (lower is better) Translates to: DAHLNPGQSFVCFRKPFQHISLC*LPRSHS Trigger: GGAATGACTTCTGGGAAGGCAGCAAAGGCTGATGTG...TTGAAATGGCTTTCTGAAACAAACAAATGACTGTCCAGGATTAAGATGTGCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR CAA 90 bp | CTACCTTTACAATCTGAAAACTGCTTGGACAGTTTTAGCACCTGTTaGGATACAGCAAACAACTCTCACACTTCCTTCCTGGAAAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: LPLQSENCLDSFSTC*DTANNSHTSFLESL Trigger: CAAACTTTCCAGGAAGGAAGTGTGAGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAACTGTCCAAGCAGTTTTCAGATTGTAAAGGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR CAA 90 bp | TTAATTAACAAAGGCATGCACCTACCTTTACAATCTGAAAACTGCTaGGACAGTTTTAGCACCTGTTTGGATACAGCAAACAACTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LINKGMHLPLQSENC*DSFSTCLDTANNSH Trigger: GTGAGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAACTGTCCAAGCAGTTTTCAGATTGTAAAGGTAGGTGCATGCCTTTGTTAATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGCCATTTCAAGCATGAAATGAGAAATGACAGGGAGGGCCAATTATTTTACCCTACCTTTACAATCTaGAAACTGCTTGGACAGTTT | + |
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Preference number: 2 (lower is better) Translates to: ESHFKHEMRNDREGQLFYPTFTI*KLLGQF Trigger: AAACTGTCCAAGCAGTTTTCAGATTGTAAAGGTAGG...GTAAAATAATTGGCCCTCCCTGTCATTTCTCATTTCATGCTTGAAATGGCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCATTGGTAGTGTTAGTCACTTCTTACCTTGTGTTTATTTGTGTCTGTGTGTTTTAGCACCTGTTTaGATACAGCAAACAACTCTC | + |
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Preference number: 2 (lower is better) Translates to: QSIGSVSHFLPCVYLCLCVLAPV*IQQTTL Trigger: GAGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAAC...ACACAGACACAAATAAACACAAGGTAAGAAGTGACTAACACTACCAATGCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCATTGGTAGTGTTAGTCACTTCTTACCTTGTGTTTATTTGTGTCTGTGTCCTTCCTGGAAAGTTTaGTTTTTAAGTGAAGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: QSIGSVSHFLPCVYLCLCPSWKV*FLSEAV Trigger: AACAGCTTCACTTAAAAATCAAACTTTCCAGGAAGG...ACACAGACACAAATAAACACAAGGTAAGAAGTGACTAACACTACCAATGCTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGCCATTTCAAGCATGAAATGAGAAATGACAGGGAGGGCCAATTATTTTACAATCTGAAAACTGCTTaGACAGTTTTAGCACCTGTT | + |
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Preference number: 2 (lower is better) Translates to: ESHFKHEMRNDREGQLFYNLKTA*TVLAPV Trigger: AACAGGTGCTAAAACTGTCCAAGCAGTTTTCAGATT...GTAAAATAATTGGCCCTCCCTGTCATTTCTCATTTCATGCTTGAAATGGCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTAATTAACAAAGGCATGCACCTACCTTTACAATCTGAAAACTGCTTGGACGAAGCTGTTTACAGTTaGCTTTTGGCCCTATTATTT | + |
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Preference number: 2 (lower is better) Translates to: KLINKGMHLPLQSENCLDEAVYS*LLALLF Trigger: AAATAATAGGGCCAAAAGTCAACTGTAAACAGCTTC...GTCCAAGCAGTTTTCAGATTGTAAAGGTAGGTGCATGCCTTTGTTAATTAACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGTCACTTCTTACCTTGTGTTTATTTGTGTCTGTGTTGAGTTAAGGAACCACTTACAATCTGAAAACTaGTTGGACAGTTTTAGCACC | + |
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Preference number: 2 (lower is better) Translates to: LVTSYLVFICVCVELRNHLQSEN*LDSFST Trigger: GGTGCTAAAACTGTCCAAGCAGTTTTCAGATTGTAA...GTGGTTCCTTAACTCAACACAGACACAAATAAACACAAGGTAAGAAGTGACTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR GCA 90 bp | GATGCACATCTTAATCCTGGACAGTCATTTGTTTGTTTCAGAAAGCCATTTCAAAAGAAATCCCACTCTTaGTGTAAGGCTCAATTATTG | + |
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Preference number: 2 (lower is better) Translates to: DAHLNPGQSFVCFRKPFQKKSHS*CKAQLL Trigger: CAATAATTGAGCCTTACAGCAAGAGTGGGATTTCTT...TTGAAATGGCTTTCTGAAACAAACAAATGACTGTCCAGGATTAAGATGTGCATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCACCACCACATCAGCCTTaGCTGCCTTCCCAGAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: SKPVSPSFSSIHMLQLLPPPHQP*LPSQKS Trigger: TGACTTCTGGGAAGGCAGCAAAGGCTGATGTGGTGG...TGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAACAAAAGAAACACTGTaGCAATACCCCCACCCGAGG | + |
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Preference number: 3 (lower is better) Translates to: SKPVSPSFSSIHMLQLLPTKETL*QYPHPR Trigger: CCTCGGGTGGGGGTATTGCAACAGTGTTTCTTTTGT...TGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR TCA 72 bp | GATGAGCCCAACTATCGGAGGGGCTGCTGTGACCTGTaGCTTTACAGCTCATTCACCTCGATGCACATCTTA | + |
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Preference number: 3 (lower is better) Translates to: DEPNYRRGCCDL*LYSSFTSMHIL Trigger: TAAGATGTGCATCGAGGTGAATGAGCTGTAAAGTCACAGGTCACAGCAGCCCCTCCGATAGTTGGGCTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR GCA 72 bp | GTCTGTGTTGAGTTAAGGAACCACCACATCAGCCTTTaGTGCCTTCCCAGAAGTCATTCCCAGCTCAGAATC | + |
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Preference number: 3 (lower is better) Translates to: VCVELRNHHISL*CLPRSHSQLRI Trigger: GATTCTGAGCTGGGAATGACTTCTGGGAAGGCAGCAAAGGCTGATGTGGTGGTTCCTTAACTCAACACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR GCA 72 bp | TGTGTTGAGTTAAGGAACCACCACATCAGCCTTTGCTaGCTTCCCAGAAGTCATTCCCAGCTCAGAATCTCA | + |
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Preference number: 3 (lower is better) Translates to: CVELRNHHISLC*LPRSHSQLRIS Trigger: TGAGATTCTGAGCTGGGAATGACTTCTGGGAAGGCAGCAAAGGCTGATGTGGTGGTTCCTTAACTCAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAAGTTTTAGCACCTGTTaGGATACAGCAAACAACTCT | + |
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Preference number: 3 (lower is better) Translates to: SKPVSPSFSSIHMLQLLPSFSTC*DTANNS Trigger: AGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAACT...TGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR CAA 90 bp | GCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAAAAGTTGGATTTCTTCTaGAGCTGGCTTTTACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: ASQSALPSVLSTCCSCFQKLDFF*SWLLQR Trigger: TCTCTGTAAAAGCCAGCTCAAGAAGAAATCCAACTT...TTGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR CAA 90 bp | GCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAAATCCTGGACAGTCATTaGTTTGTTTCAGAAAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: ASQSALPSVLSTCCSCFQILDSH*FVSESH Trigger: ATGGCTTTCTGAAACAAACAAATGACTGTCCAGGAT...TTGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR GCA 72 bp | AGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTaGAGCTGCTTCCAAAGAACACCTTGTAAACATTTC | + |
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Preference number: 3 (lower is better) Translates to: SQSALPSVLSTC*SCFQRTPCKHF Trigger: GAAATGTTTACAAGGTGTTCTTTGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR CAA 90 bp | ATACTGTTAGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCAGTTTTAGCACCTGTTaGGATACAGCAAACAACTCT | + |
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Preference number: 3 (lower is better) Translates to: ILLASQSALPSVLSTCCSSFSTC*DTANNS Trigger: AGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAACT...GCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCTAACAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR CCA 72 bp | TCAAAAAGGATTTCAGAGCCTAAGTCATTTCCCTTGTaGCTAGAGAATACACTGGAGTCAGTGAGTTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SKRISEPKSFPL*LENTLESVSWR Trigger: TCTCCAACTCACTGACTCCAGTGTATTCTCTAGCCACAAGGGAAATGACTTAGGCTCTGAAATCCTTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR CAA 90 bp | GATGCACATCTTAATCCTGGACAGTCATTTGTTTGTTTCAGAAAGCCATTTCAAACTGGAGTCAGTGAGTaGGAGAAGTTCTGTAACTGT | + |
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Preference number: 3 (lower is better) Translates to: DAHLNPGQSFVCFRKPFQTGVSE*EKFCNC Trigger: ACAGTTACAGAACTTCTCCAACTCACTGACTCCAGT...TTGAAATGGCTTTCTGAAACAAACAAATGACTGTCCAGGATTAAGATGTGCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTTAATTAACAAAGGCATGCACCTACCTTTACAATCTGAAAACTGCTTGGACACTGGAGTCAGTGAGTaGGAGAAGTTCTGTAACTGT | + |
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Preference number: 3 (lower is better) Translates to: KLINKGMHLPLQSENCLDTGVSE*EKFCNC Trigger: ACAGTTACAGAACTTCTCCAACTCACTGACTCCAGT...GTCCAAGCAGTTTTCAGATTGTAAAGGTAGGTGCATGCCTTTGTTAATTAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR GCA 72 bp | TTTACAGAAGTGCAAATTTGCCTCGGGGAAAGCCTCTaGCATTTAAAACATTCAGAACACAATAGTAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: FTEVQICLGESL*HLKHSEHNSSF Trigger: GAAGCTACTATTGTGTTCTGAATGTTTTAAATGGCAGAGGCTTTCCCCGAGGCAAATTTGCACTTCTGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGTCACTTCTTACCTTGTGTTTATTTGTGTCTGTGTTGAGTTAAGGAACCACCAATCTGAAAACTGCTaGGACAGTTTTAGCACCTGT | + |
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Preference number: 3 (lower is better) Translates to: LVTSYLVFICVCVELRNHQSENC*DSFSTC Trigger: ACAGGTGCTAAAACTGTCCAAGCAGTTTTCAGATTG...GTGGTTCCTTAACTCAACACAGACACAAATAAACACAAGGTAAGAAGTGACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR TCA 90 bp | ACTATCGGAGGGGCTGCTGTGACCTGTGACTTTACAGCTCATTCACCTCGATGCCAGCTTTCCAGGGCATaGCCAAGACAGCCACCAAGA | + |
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Preference number: 4 (lower is better) Translates to: TIGGAAVTCDFTAHSPRCQLSRA*PRQPPR Trigger: TCTTGGTGGCTGTCTTGGTCATGCCCTGGAAAGCTG...GCATCGAGGTGAATGAGCTGTAAAGTCACAGGTCACAGCAGCCCCTCCGATAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CCA 90 bp | ACTATCGGAGGGGCTGCTGTGACCTGTGACTTTACAGCTCATTCACCTCGATGCGAGCCTCGGGGCTCATaGTGGCTGGAAAACATCACA | + |
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Preference number: 4 (lower is better) Translates to: TIGGAAVTCDFTAHSPRCEPRGS*WLENIT Trigger: TGTGATGTTTTCCAGCCACCATGAGCCCCGAGGCTC...GCATCGAGGTGAATGAGCTGTAAAGTCACAGGTCACAGCAGCCCCTCCGATAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CCA 90 bp | GCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAATGGTCTGGCAGTTCTTaGCATGGACTGCTGCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: ASQSALPSVLSTCCSCFQWSGSS*HGLLPS Trigger: AGAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCA...TTGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CCA 90 bp | AGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAAGAAGTTGGTCACCTTaGACCGCAGGTGTCGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: SKPVSPSFSSIHMLQLLPRSWSP*TAGVET Trigger: GGTTTCGACACCTGCGGTCCAAGGTGACCAACTTCT...TGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAATCAATGCAGAATGGCTaGGTCTCCTCAGAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ASQSALPSVLSTCCSCFQSMQNG*VSSEPQ Trigger: CTGTGGCTCTGAGGAGACCCAGCCATTCTGCATTGA...TTGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCATTACCTGTGGTGGTCTaGCAGTTCTTGGCATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SKPVSPSFSSIHMLQLLPLPVVV*QFLAWT Trigger: AGTCCATGCCAAGAACTGCCAGACCACCACAGGTAA...TGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGTTAGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCGAGCCTCGGGGCTCATaGTGGCTGGAAAACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: ILLASQSALPSVLSTCCSEPRGS*WLENIT Trigger: TGTGATGTTTTCCAGCCACCATGAGCCCCGAGGCTC...GCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCTAACAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGAGATACTGTTAGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTGTCATAGTCCAATATaGCCGATAAGGCCGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AGDTVSKPVSPSFSSIHMCHSPI*PIRPGT Trigger: TGTCCCCGGCCTTATCGGTCATATTGGACTATGACA...CATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCTAACAGTATCTCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAAATCAGGATGAAGGCTaGCTTCGGAGTCATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKPVSPSFSSIHMLQLLPNQDEG*LRSHLP Trigger: AGGAAGATGACTCCGAAGGCAGCCTTCATCCTGATT...TGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGAGATACTGTTAGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGGGTTTCCATTACCTGTaGTGGTCTGGCAGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGDTVSKPVSPSFSSIHMGFHYL*WSGSSW Trigger: CCAAGAACTGCCAGACCACCACAGGTAATGGAAACC...CATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCTAACAGTATCTCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | GCTTGGACAGTTTTAGCACCTGTTTGGATACAGCAAACAACTCTCACACTTCCTCCTCGGGGCTCATGGTaGCTGGAAAACATCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AWTVLAPVWIQQTTLTLPPRGSW*LENITA Trigger: GGCTGTGATGTTTTCCAGCCACCATGAGCCCCGAGG...AGGAAGTGTGAGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAACTGTCCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR TCA 90 bp | ACTATCGGAGGGGCTGCTGTGACCTGTGACTTTACAGCTCATTCACCTCGATGCACACAGCTAAAGAGATaGCAAAGAAGTTGGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TIGGAAVTCDFTAHSPRCTQLKR*QRSWSP Trigger: AGGTGACCAACTTCTTTGTCATCTCTTTAGCTGTGT...GCATCGAGGTGAATGAGCTGTAAAGTCACAGGTCACAGCAGCCCCTCCGATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGAGATACTGTTAGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGATCTTCCTCTCATACTaGAAAGGGCTGGAGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGDTVSKPVSPSFSSIHMIFLSY*KGLEIA Trigger: GGCTATCTCCAGCCCTTTCCAGTATGAGAGGAAGAT...CATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCTAACAGTATCTCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAACACAGCTAAAGAGATaGCAAAGAAGTTGGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SKPVSPSFSSIHMLQLLPTQLKR*QRSWSP Trigger: AGGTGACCAACTTCTTTGTCATCTCTTTAGCTGTGT...TGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGTTAGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCAATCAGGATGAAGGCTaGCTTCGGAGTCATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLASQSALPSVLSTCCSNQDEG*LRSHLP Trigger: AGGAAGATGACTCCGAAGGCAGCCTTCATCCTGATT...GCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCTAACAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTTGTGGCTAGAGAATACACTGGAGTCAGTGAGTTGGAGAAGTTCTGTAACGTAGGTTTTGCCTTGTaGCAGCTTAGCTGCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLVAREYTGVSELEKFCNVGFAL*QLSCTG Trigger: TCCAGTGCAGCTAAGCTGGCACAAGGCAAAACCTAC...GTTACAGAACTTCTCCAACTCACTGACTCCAGTGTATTCTCTAGCCACAAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACTGCTTGGACAGTTTTAGCACCTGTTTGGATACAGCAAACAACTCTCACGAAGTCCCTCTCCACTaGCAGGCCAGTCTCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ENCLDSFSTCLDTANNSHEVPLH*QASLIH Trigger: ATGGATGAGACTGGCCTGCCAGTGGAGAGGGACTTC...GTGAGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAACTGTCCAAGCAGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTTGTGGCTAGAGAATACACTGGAGTCAGTGAGTTGGAGAAGTTCTGTAACTTACCTGTGGTGGTCTaGCAGTTCTTGGCATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SLVAREYTGVSELEKFCNLPVVV*QFLAWT Trigger: AGTCCATGCCAAGAACTGCCAGACCACCACAGGTAA...GTTACAGAACTTCTCCAACTCACTGACTCCAGTGTATTCTCTAGCCACAAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR TCA 90 bp | ACCTGTTTGGATACAGCAAACAACTCTCACACTTCCTTCCTGGAAAGTTTGATTCAGCTTTCCAGGGCATaGCCAAGACAGCCACCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TCLDTANNSHTSFLESLIQLSRA*PRQPPR Trigger: TCTTGGTGGCTGTCTTGGTCATGCCCTGGAAAGCTG...AATCAAACTTTCCAGGAAGGAAGTGTGAGAGTTGTTTGCTGTATCCAAACAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| 3UTR CAA 72 bp | TCCCTTGTGGCTAGAGAATACACTGGAGTCAGTGAGTaGGAGAAGTTCTGTAACTGTCCAAAAGCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLVAREYTGVSE*EKFCNCPKAAE Trigger: CTCTGCTGCTTTTGGACAGTTACAGAACTTCTCCAACTCACTGACTCCAGTGTATTCTCTAGCCACAAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACTGCTTGGACAGTTTTAGCACCTGTTTGGATACAGCAAACAACTCTCACGGTTTCCATTACCTGTaGTGGTCTGGCAGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ENCLDSFSTCLDTANNSHGFHYL*WSGSSW Trigger: CCAAGAACTGCCAGACCACCACAGGTAATGGAAACC...GTGAGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAACTGTCCAAGCAGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | GATGCACATCTTAATCCTGGACAGTCATTTGTTTGTTTCAGAAAGCCATTTCAACCTCGGGGCTCATGGTaGCTGGAAAACATCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DAHLNPGQSFVCFRKPFQPRGSW*LENITA Trigger: GGCTGTGATGTTTTCCAGCCACCATGAGCCCCGAGG...TTGAAATGGCTTTCTGAAACAAACAAATGACTGTCCAGGATTAAGATGTGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTAATTAACAAAGGCATGCACCTACCTTTACAATCTGAAAACTGCTTGGACGAAGTCCCTCTCCACTaGCAGGCCAGTCTCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLINKGMHLPLQSENCLDEVPLH*QASLIH Trigger: ATGGATGAGACTGGCCTGCCAGTGGAGAGGGACTTC...GTCCAAGCAGTTTTCAGATTGTAAAGGTAGGTGCATGCCTTTGTTAATTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGCCATTTCAAGCATGAAATGAGAAATGACAGGGAGGGCCAATTATTTTACAGAAGTTGGTCACCTTaGACCGCAGGTGTCGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: ESHFKHEMRNDREGQLFYRSWSP*TAGVET Trigger: GGTTTCGACACCTGCGGTCCAAGGTGACCAACTTCT...GTAAAATAATTGGCCCTCCCTGTCATTTCTCATTTCATGCTTGAAATGGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| 3UTR CAA 72 bp | GCTTCAAAAAGGATTTCAGAGCCTAAGTCATTTCCCTaGTGGCTAGAGAATACACTGGAGTCAGTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASKRISEPKSFP*WLENTLESVSW Trigger: CCAACTCACTGACTCCAGTGTATTCTCTAGCCACAAGGGAAATGACTTAGGCTCTGAAATCCTTTTTGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | CCTAAGATAATGCTTCAAAAAGGATTTCAGAGCCTAAGTCATTTCCCTTGTGGCTTCCATTACCTGTGGTaGTCTGGCAGTTCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PKIMLQKGFQSLSHFPCGFHYLW*SGSSWH Trigger: ATGCCAAGAACTGCCAGACCACCACAGGTAATGGAA...GCCACAAGGGAAATGACTTAGGCTCTGAAATCCTTTTTGAAGCATTATCTTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | GATGCACATCTTAATCCTGGACAGTCATTTGTTTGTTTCAGAAAGCCATTTCAATCAATGCAGAATGGCTaGGTCTCCTCAGAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DAHLNPGQSFVCFRKPFQSMQNG*VSSEPQ Trigger: CTGTGGCTCTGAGGAGACCCAGCCATTCTGCATTGA...TTGAAATGGCTTTCTGAAACAAACAAATGACTGTCCAGGATTAAGATGTGCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| 3UTR CAA 72 bp | CAATCTGAAAACTGCTTGGACAGTTTTAGCACCTGTTaGGATACAGCAAACAACTCTCACACTTCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSENCLDSFSTC*DTANNSHTSFL Trigger: CAGGAAGGAAGTGTGAGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAACTGTCCAAGCAGTTTTCAGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR GCA 90 bp | GCTTGGACAGTTTTAGCACCTGTTTGGATACAGCAAACAACTCTCACACTTCCTAACAGACAAAGTCCATaGTACGCTAATCAGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: AWTVLAPVWIQQTTLTLPNRQSP*YANQDE Trigger: TTCATCCTGATTAGCGTAGCATGGACTTTGTCTGTT...AGGAAGTGTGAGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAACTGTCCAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| 3UTR CAA 72 bp | AAAGGCATGCACCTACCTTTACAATCTGAAAACTGCTaGGACAGTTTTAGCACCTGTTTGGATACAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KGMHLPLQSENC*DSFSTCLDTAN Trigger: GTTTGCTGTATCCAAACAGGTGCTAAAACTGTCCAAGCAGTTTTCAGATTGTAAAGGTAGGTGCATGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | GATGCACATCTTAATCCTGGACAGTCATTTGTTTGTTTCAGAAAGCCATTTCAATTCCATTACCTGTGGTaGTCTGGCAGTTCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DAHLNPGQSFVCFRKPFQFHYLW*SGSSWH Trigger: ATGCCAAGAACTGCCAGACCACCACAGGTAATGGAA...TTGAAATGGCTTTCTGAAACAAACAAATGACTGTCCAGGATTAAGATGTGCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGCCATTTCAAGCATGAAATGAGAAATGACAGGGAGGGCCAATTATTTTACGTCGAGAATGCCTTCTaGAAATCGGCATTAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ESHFKHEMRNDREGQLFYVENAF*KSALKA Trigger: TGCTTTTAATGCCGATTTTCAGAAGGCATTCTCGAC...GTAAAATAATTGGCCCTCCCTGTCATTTCTCATTTCATGCTTGAAATGGCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTAATTAACAAAGGCATGCACCTACCTTTACAATCTGAAAACTGCTTGGACCTGTGGGTAACGGGTTaGATCTTTTCTAGAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KLINKGMHLPLQSENCLDLWVTG*IFSRET Trigger: TGTCTCTCTAGAAAAGATCCAACCCGTTACCCACAG...GTCCAAGCAGTTTTCAGATTGTAAAGGTAGGTGCATGCCTTTGTTAATTAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CCA 90 bp | GATGCACATCTTAATCCTGGACAGTCATTTGTTTGTTTCAGAAAGCCATTTCAACTGTGGGTAACGGGTTaGATCTTTTCTAGAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: DAHLNPGQSFVCFRKPFQLWVTG*IFSRET Trigger: TGTCTCTCTAGAAAAGATCCAACCCGTTACCCACAG...TTGAAATGGCTTTCTGAAACAAACAAATGACTGTCCAGGATTAAGATGTGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR TCA 90 bp | TTAGTCACTTCTTACCTTGTGTTTATTTGTGTCTGTGTTGAGTTAAGGAACCACGTCGAGAATGCCTTCTaGAAATCGGCATTAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVTSYLVFICVCVELRNHVENAF*KSALKA Trigger: TGCTTTTAATGCCGATTTTCAGAAGGCATTCTCGAC...GTGGTTCCTTAACTCAACACAGACACAAATAAACACAAGGTAAGAAGTGACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| 3UTR CAA 72 bp | TTCACCTCGATGCACATCTTAATCCTGGACAGTCATTaGTTTGTTTCAGAAAGCCATTTCAAGCATGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: FTSMHILILDSH*FVSESHFKHEM Trigger: CATTTCATGCTTGAAATGGCTTTCTGAAACAAACAAATGACTGTCCAGGATTAAGATGTGCATCGAGGTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTAATTAACAAAGGCATGCACCTACCTTTACAATCTGAAAACTGCTTGGACCAAATACATCGAAGGTaGTGGAATCAATGCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: KLINKGMHLPLQSENCLDQIHRR*WNQCRM Trigger: CATTCTGCATTGATTCCATCACCTTCGATGTATTTG...GTCCAAGCAGTTTTCAGATTGTAAAGGTAGGTGCATGCCTTTGTTAATTAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTAATTAACAAAGGCATGCACCTACCTTTACAATCTGAAAACTGCTTGGACAACAGACAAAGTCCATaGTACGCTAATCAGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLINKGMHLPLQSENCLDNRQSP*YANQDE Trigger: TTCATCCTGATTAGCGTAGCATGGACTTTGTCTGTT...GTCCAAGCAGTTTTCAGATTGTAAAGGTAGGTGCATGCCTTTGTTAATTAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| 3UTR CAA 72 bp | AAAAAGAAATCCCACTCTTGCTGTAAGGCTCAATTATaGTCAGAGAAGTTAATTAACAAAGGCATGCACCTA | + |
|
Preference number: 4 (lower is better) Translates to: KKKSHSCCKAQL*SEKLINKGMHL Trigger: TAGGTGCATGCCTTTGTTAATTAACTTCTCTGACAATAATTGAGCCTTACAGCAAGAGTGGGATTTCTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS TCA 90 bp | GGTGGTCTGGCAGTTCTTGGCATGGACTGCTGCCCTCTCCAAAGCTaGGATGCGCCGGATTTGCTTCTGGGCAATCCTGTAGATACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GGLAVLGMDCCPLQS*DAPDLLLGNPVDTG Trigger: ACCAGTATCTACAGGATTGCCCAGAAGCAAATCCGGCGCATCTCAGCTTTGGAGAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS CCA 90 bp | TCGACAGGGTTTCCATTACCTGTGGTGGTCTGGCAGTTCTTGGCATaGACTGCTGCCCTCTCCAAAGCTGAGATGCGCCGGATTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: STGFPLPVVVWQFLA*TAALSKAEMRRICF Trigger: GAAGCAAATCCGGCGCATCTCAGCTTTGGAGAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCACCACAGGTAATGGAAACCCTGTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS CCA 90 bp | AGCATTCGACAGGGTTTCCATTACCTGTGGTGGTCTGGCAGTTCTTaGCATGGACTGCTGCCCTCTCCAAAGCTGAGATGCGCCGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: SIRQGFHYLWWSGSS*HGLLPSPKLRCAGF Trigger: AAATCCGGCGCATCTCAGCTTTGGAGAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCACCACAGGTAATGGAAACCCTGTCGAATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAACCAGATTACAGTCCTaGGAGATGGAGCCTCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKPVSPSFSSIHMLQLLPTRLQS*EMEPRG Trigger: GCCCCGAGGCTCCATCTCCAAGGACTGTAATCTGGT...TGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAAAAGAAGTTGGTCACCTaGGACCGCAGGTGTCGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ASQSALPSVLSTCCSCFQKKLVT*DRRCRN Trigger: GTTTCGACACCTGCGGTCCAAGGTGACCAACTTCTT...TTGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS TCA 90 bp | TCAGGGAGGAATTCGCCCAGCCAAACCACACAAATACATCGAAGGTaGTGGAATCAATGCAGAATGGCTGGGTCTCCTCAGAGCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGRNSPSQTTQIHRR*WNQCRMAGSPQSHR Trigger: TCTGTGGCTCTGAGGAGACCCAGCCATTCTGCATTGATTCCATCACCTTCGATGTATTTGTGTGGTTTGGCTGGGCGAATTCCTCCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS CCA 90 bp | AACTTTCTGATTGAGAGCATTCGACAGGGTTTCCATTACCTGTGGTaGTCTGGCAGTTCTTGGCATGGACTGCTGCCCTCTCCAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NFLIESIRQGFHYLW*SGSSWHGLLPSPKL Trigger: CAGCTTTGGAGAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCACCACAGGTAATGGAAACCCTGTCGAATGCTCTCAATCAGAAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS CCA 90 bp | AGGAACTTTCTGATTGAGAGCATTCGACAGGGTTTCCATTACCTGTaGTGGTCTGGCAGTTCTTGGCATGGACTGCTGCCCTCTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RNFLIESIRQGFHYL*WSGSSWHGLLPSPK Trigger: CTTTGGAGAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCACCACAGGTAATGGAAACCCTGTCGAATGCTCTCAATCAGAAAGTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
||
| CDS CCA 90 bp | GCCAAACCACACAAATACATCGAAGGTGATGGAATCAATGCAGAATaGCTGGGTCTCCTCAGAGCCACAGAAGGGCACCATACAGTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: AKPHKYIEGDGINAE*LGLLRATEGHHTVR Trigger: TCGAACTGTATGGTGCCCTTCTGTGGCTCTGAGGAGACCCAGCCATTCTGCATTGATTCCATCACCTTCGATGTATTTGTGTGGTTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CAA 90 bp | GCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGTTGCAGCTGCTTCCAAACAGCCCCGTTGTTGTaGATGCTTACAGTCTCTATG | + |
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Preference number: 5 (lower is better) Translates to: ASQSALPSVLSTCCSCFQTAPLL*MLTVSM Trigger: CATAGAGACTGTAAGCATCAACAACAACGGGGCTGT...TTGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CAA 90 bp | ACCTGTTTGGATACAGCAAACAACTCTCACACTTCCTTCCTGGAAAGTTTGATTGTGGTCTGGCAGTTCTaGGCATGGACTGCTGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: TCLDTANNSHTSFLESLIVVWQF*AWTAAL Trigger: GAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCAC...AATCAAACTTTCCAGGAAGGAAGTGTGAGAGTTGTTTGCTGTATCCAAACAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CAA 90 bp | GCAGGAGATACTGTTAGCAAGCCAGTCAGCCCTTCCTTCAGTTCTATCCACATGATCACAGCCCCGTTGTaGTTGATGCTTACAGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: AGDTVSKPVSPSFSSIHMITAPL*LMLTVS Trigger: AGAGACTGTAAGCATCAACAACAACGGGGCTGTGAT...CATGTGGATAGAACTGAAGGAAGGGCTGACTGGCTTGCTAACAGTATCTCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS GCA 90 bp | TATGAGAACAGACAAAGTCCATGCTACGCTAATCAGGATGAAGGCTaGCTTCGGAGTCATCTTCCTCTCATACTGGAAAGGGCTGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: YENRQSPCYANQDEG*LRSHLPLILERAGD Trigger: ATCTCCAGCCCTTTCCAGTATGAGAGGAAGATGACTCCGAAGGCAGCCTTCATCCTGATTAGCGTAGCATGGACTTTGTCTGTTCTCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CCA 90 bp | AACCACACAAATACATCGAAGGTGATGGAATCAATGCAGAATGGCTaGGTCTCCTCAGAGCCACAGAAGGGCACCATACAGTTCGAAATG | + |
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Preference number: 5 (lower is better) Translates to: NHTNTSKVMESMQNG*VSSEPQKGTIQFEM Trigger: CATTTCGAACTGTATGGTGCCCTTCTGTGGCTCTGAGGAGACCCAGCCATTCTGCATTGATTCCATCACCTTCGATGTATTTGTGTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CAA 90 bp | GAAAACTGCTTGGACAGTTTTAGCACCTGTTTGGATACAGCAAACAACTCTCACGAGATGACAAAGAAGTaGGTCACCTTGGACCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: ENCLDSFSTCLDTANNSHEMTKK*VTLDRR Trigger: CCTGCGGTCCAAGGTGACCAACTTCTTTGTCATCTC...GTGAGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAACTGTCCAAGCAGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CAA 90 bp | GATGCACATCTTAATCCTGGACAGTCATTTGTTTGTTTCAGAAAGCCATTTCAAGTGGTCTGGCAGTTCTaGGCATGGACTGCTGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: DAHLNPGQSFVCFRKPFQVVWQF*AWTAAL Trigger: GAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCAC...TTGAAATGGCTTTCTGAAACAAACAAATGACTGTCCAGGATTAAGATGTGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CAA 90 bp | ACCTGTTTGGATACAGCAAACAACTCTCACACTTCCTTCCTGGAAAGTTTGATTAACCTCGTGTCACAGTaGTCATCCTCGGCATCTTCC | + |
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Preference number: 5 (lower is better) Translates to: TCLDTANNSHTSFLESLINLVSQ*SSSASS Trigger: GGAAGATGCCGAGGATGACAACTGTGACACGAGGTT...AATCAAACTTTCCAGGAAGGAAGTGTGAGAGTTGTTTGCTGTATCCAAACAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CAA 90 bp | GCTTGGACAGTTTTAGCACCTGTTTGGATACAGCAAACAACTCTCACACTTCCTACAGCCCCGTTGTTGTaGATGCTTACAGTCTCTATG | + |
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Preference number: 5 (lower is better) Translates to: AWTVLAPVWIQQTTLTLPTAPLL*MLTVSM Trigger: CATAGAGACTGTAAGCATCAACAACAACGGGGCTGT...AGGAAGTGTGAGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAACTGTCCAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CAA 90 bp | GATGCACATCTTAATCCTGGACAGTCATTTGTTTGTTTCAGAAAGCCATTTCAAACCAGATTACAGTCCTaGGAGATGGAGCCTCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: DAHLNPGQSFVCFRKPFQTRLQS*EMEPRG Trigger: GCCCCGAGGCTCCATCTCCAAGGACTGTAATCTGGT...TTGAAATGGCTTTCTGAAACAAACAAATGACTGTCCAGGATTAAGATGTGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS TCA 90 bp | ACTTTAGTCTCCCTCTTAAAGGACATCTTAAAGGAACTTTCTGATTaGGAGCATTCGACAGGGTTTCCATTACCTGTGGTGGTCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: TLVSLLKDILKELSD*EHSTGFPLPVVVWQ Trigger: CTGCCAGACCACCACAGGTAATGGAAACCCTGTCGAATGCTCTCAATCAGAAAGTTCCTTTAAGATGTCCTTTAAGAGGGAGACTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CAA 90 bp | GAAAGCCATTTCAAGCATGAAATGAGAAATGACAGGGAGGGCCAATTATTTTACAACCTCGTGTCACAGTaGTCATCCTCGGCATCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ESHFKHEMRNDREGQLFYNLVSQ*SSSASS Trigger: GGAAGATGCCGAGGATGACAACTGTGACACGAGGTT...GTAAAATAATTGGCCCTCCCTGTCATTTCTCATTTCATGCTTGAAATGGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CAA 90 bp | TTAGTCACTTCTTACCTTGTGTTTATTTGTGTCTGTGTTGAGTTAAGGAACCACAAGAAGTTGGTCACCTaGGACCGCAGGTGTCGAAAC | + |
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Preference number: 5 (lower is better) Translates to: LVTSYLVFICVCVELRNHKKLVT*DRRCRN Trigger: GTTTCGACACCTGCGGTCCAAGGTGACCAACTTCTT...GTGGTTCCTTAACTCAACACAGACACAAATAAACACAAGGTAAGAAGTGACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CAA 90 bp | TTAGTCACTTCTTACCTTGTGTTTATTTGTGTCTGTGTTGAGTTAAGGAACCACGAGATGACAAAGAAGTaGGTCACCTTGGACCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LVTSYLVFICVCVELRNHEMTKK*VTLDRR Trigger: CCTGCGGTCCAAGGTGACCAACTTCTTTGTCATCTC...GTGGTTCCTTAACTCAACACAGACACAAATAAACACAAGGTAAGAAGTGACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CAA 90 bp | GAAAGCCATTTCAAGCATGAAATGAGAAATGACAGGGAGGGCCAATTATTTTACATCACAGCCCCGTTGTaGTTGATGCTTACAGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: ESHFKHEMRNDREGQLFYITAPL*LMLTVS Trigger: AGAGACTGTAAGCATCAACAACAACGGGGCTGTGAT...GTAAAATAATTGGCCCTCCCTGTCATTTCTCATTTCATGCTTGAAATGGCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS-3UTR CAA 90 bp | AAGTTAATTAACAAAGGCATGCACCTACCTTTACAATCTGAAAACTGCTTGGACTCCAGGGAAGTAAAATaGCCATCCAAGGGCCATGTA | + |
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Preference number: 5 (lower is better) Translates to: KLINKGMHLPLQSENCLDSREVK*PSKGHV Trigger: TACATGGCCCTTGGATGGCAATTTTACTTCCCTGGA...GTCCAAGCAGTTTTCAGATTGTAAAGGTAGGTGCATGCCTTTGTTAATTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CCA 72 bp | TTTCCATTACCTGTGGTGGTCTGGCAGTTCTTGGCATaGACTGCTGCCCTCTCCAAAGCTGAGATGCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: FPLPVVVWQFLA*TAALSKAEMRR Trigger: CCGGCGCATCTCAGCTTTGGAGAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCACCACAGGTAATGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CAA 90 bp | GAGCATTCGACAGGGTTTCCATTACCTGTGGTGGTCTGGCAGTTCTaGGCATGGACTGCTGCCCTCTCCAAAGCTGAGATGCGCCGGATT | + |
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Preference number: 6 (lower is better) Translates to: EHSTGFPLPVVVWQF*AWTAALSKAEMRRI Trigger: AATCCGGCGCATCTCAGCTTTGGAGAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCACCACAGGTAATGGAAACCCTGTCGAATGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CCA 72 bp | GGCTGTGAGGATGCGAAAGGAGAAGTCCCTCTCCACTaGCAGGCCAGTCTCATCCATGGTAGAAGTGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: GCEDAKGEVPLH*QASLIHGRSVR Trigger: CCTAACACTTCTACCATGGATGAGACTGGCCTGCCAGTGGAGAGGGACTTCTCCTTTCGCATCCTCACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021932.6 |
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| CDS CCA 72 bp | CAGGGTTTCCATTACCTGTGGTGGTCTGGCAGTTCTTaGCATGGACTGCTGCCCTCTCCAAAGCTGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: QGFHYLWWSGSS*HGLLPSPKLRC Trigger: GCATCTCAGCTTTGGAGAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCACCACAGGTAATGGAAACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CCA 72 bp | GAGCATTCGACAGGGTTTCCATTACCTGTGGTGGTCTaGCAGTTCTTGGCATGGACTGCTGCCCTCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: EHSTGFPLPVVV*QFLAWTAALSK Trigger: TTTGGAGAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCACCACAGGTAATGGAAACCCTGTCGAATGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CCA 72 bp | CTGATTGAGAGCATTCGACAGGGTTTCCATTACCTGTaGTGGTCTGGCAGTTCTTGGCATGGACTGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LIESIRQGFHYL*WSGSSWHGLLP Trigger: GGGCAGCAGTCCATGCCAAGAACTGCCAGACCACCACAGGTAATGGAAACCCTGTCGAATGCTCTCAATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CAA 72 bp | ACAGGGTTTCCATTACCTGTGGTGGTCTGGCAGTTCTaGGCATGGACTGCTGCCCTCTCCAAAGCTGAGATG | + |
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Preference number: 6 (lower is better) Translates to: TGFPLPVVVWQF*AWTAALSKAEM Trigger: CATCTCAGCTTTGGAGAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCACCACAGGTAATGGAAACCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CCA 72 bp | ATGAAGGCTGCCTTCGGAGTCATCTTCCTCTCATACTaGAAAGGGCTGGAGATAGCCCAATACCTGTCCACG | + |
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Preference number: 6 (lower is better) Translates to: MKAAFGVIFLSY*KGLEIAQYLST Trigger: CGTGGACAGGTATTGGGCTATCTCCAGCCCTTTCCAGTATGAGAGGAAGATGACTCCGAAGGCAGCCTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CCA 72 bp | ATTGAGAGCATTCGACAGGGTTTCCATTACCTGTGGTaGTCTGGCAGTTCTTGGCATGGACTGCTGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: IESIRQGFHYLW*SGSSWHGLLPS Trigger: AGAGGGCAGCAGTCCATGCCAAGAACTGCCAGACCACCACAGGTAATGGAAACCCTGTCGAATGCTCTCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CAA 90 bp | CTCGTGTCACAGTTGTCATCCTCGGCATCTTCCAGGGAAGTAAAATaGCCATCCAAGGGCCATGTAGGTTTTGCCTTGTGCCAGCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: LVSQLSSSASSREVK*PSKGHVGFALCQLS Trigger: GCTAAGCTGGCACAAGGCAAAACCTACATGGCCCTTGGATGGCAATTTTACTTCCCTGGAAGATGCCGAGGATGACAACTGTGACACGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CAA 90 bp | AGGGAGGATGAAATGGCGTATGTCCTGCTCAACCTCGTGTCACAGTaGTCATCCTCGGCATCTTCCAGGGAAGTAAAATTGCCATCCAAG | + |
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Preference number: 6 (lower is better) Translates to: REDEMAYVLLNLVSQ*SSSASSREVKLPSK Trigger: CTTGGATGGCAATTTTACTTCCCTGGAAGATGCCGAGGATGACAACTGTGACACGAGGTTGAGCAGGACATACGCCATTTCATCCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS TCA 72 bp | TCTTTTCTAGAGAGACATCGGTGTCATAGTCCAATATaGCCGATAAGGCCGGGGACAGCTTCTCCAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SFLERHRCHSPI*PIRPGTASPVA Trigger: AGCCACTGGAGAAGCTGTCCCCGGCCTTATCGGTCATATTGGACTATGACACCGATGTCTCTCTAGAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CCA 72 bp | AATACATCGAAGGTGATGGAATCAATGCAGAATGGCTaGGTCTCCTCAGAGCCACAGAAGGGCACCATACAG | + |
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Preference number: 6 (lower is better) Translates to: NTSKVMESMQNG*VSSEPQKGTIQ Trigger: CTGTATGGTGCCCTTCTGTGGCTCTGAGGAGACCCAGCCATTCTGCATTGATTCCATCACCTTCGATGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS GCA 72 bp | AGACAAAGTCCATGCTACGCTAATCAGGATGAAGGCTaGCTTCGGAGTCATCTTCCTCTCATACTGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: RQSPCYANQDEG*LRSHLPLILER Trigger: CCTTTCCAGTATGAGAGGAAGATGACTCCGAAGGCAGCCTTCATCCTGATTAGCGTAGCATGGACTTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CAA 72 bp | GAAATGGCGTATGTCCTGCTCAACCTCGTGTCACAGTaGTCATCCTCGGCATCTTCCAGGGAAGTAAAATTG | + |
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Preference number: 6 (lower is better) Translates to: EMAYVLLNLVSQ*SSSASSREVKL Trigger: CAATTTTACTTCCCTGGAAGATGCCGAGGATGACAACTGTGACACGAGGTTGAGCAGGACATACGCCATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CAA 72 bp | GGCTCATGGTGGCTGGAAAACATCACAGCCCCGTTGTaGTTGATGCTTACAGTCTCTATGGCATTATTCGTT | + |
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Preference number: 6 (lower is better) Translates to: GSWWLENITAPL*LMLTVSMALFV Trigger: AACGAATAATGCCATAGAGACTGTAAGCATCAACAACAACGGGGCTGTGATGTTTTCCAGCCACCATGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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| CDS CAA 72 bp | TCATGGTGGCTGGAAAACATCACAGCCCCGTTGTTGTaGATGCTTACAGTCTCTATGGCATTATTCGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: SWWLENITAPLL*MLTVSMALFVV Trigger: TACAACGAATAATGCCATAGAGACTGTAAGCATCAACAACAACGGGGCTGTGATGTTTTCCAGCCACCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021932.6 ENSMUST00000221470.2 |
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