Pregenerated sensors for DRC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056598Ensembl transcript IDs: ENSMUST00000070805.13, ENSMUST00000094140.9, ENSMUST00000108722.5, ENSMUST00000108723.9
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCTTGCCAGCACGGCAGGCCCAGCCAGCCTCTGTCACTCAATGTaGCTTCAGAAATCTAGACAGCACTGTTCCACAAAGCCCAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: QLASTAGPASLCHSM*LQKSRQHCSTKPSW Trigger: CCAGCTGGGCTTTGTGGAACAGTGCTGTCTAGATTTCTGAAGGCACATTGAGTGACAGAGGCTGGCTGGGCCTGCCGTGCTGGCAAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR TCA 90 bp | CCACCAGTCTCCTGCTTACCACTGAAGCACAGGGTTTGGTTGTCATaGCCACTGCCACTATGTATAACAAGTGCTGACTTTTCCTCCTCG | + |
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Preference number: 1 (lower is better) Translates to: PPVSCLPLKHRVWLS*PLPLCITSADFSSS Trigger: CGAGGAGGAAAAGTCAGCACTTGTTATACATAGTGGCAGTGGTCATGACAACCAAACCCTGTGCTTCAGTGGTAAGCAGGAGACTGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR TCA 90 bp | ATGGGGAAGCAGCTCTCTAATTTCTCTTATTTCTGTGAACAGCACTaGGACTGGACTTTGGAAACCAGCTTGTCCCTCAAGGCAGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: MGKQLSNFSYFCEQH*DWTLETSLSLKAGL Trigger: GAGCCCTGCCTTGAGGGACAAGCTGGTTTCCAAAGTCCAGTCTCAGTGCTGTTCACAGAAATAAGAGAAATTAGAGAGCTGCTTCCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR TCA 90 bp | CAGAAATCTAGACAGCACTGTTCCACAAAGCCCAGCTGGCCTGACTaGAAAGGCCTTTTGCATTCATGTAGCCAGCTGAGATTTGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: QKSRQHCSTKPSWPD*KGLLHSCSQLRFVR Trigger: CCTCACAAATCTCAGCTGGCTACATGAATGCAAAAGGCCTTTTCAGTCAGGCCAGCTGGGCTTTGTGGAACAGTGCTGTCTAGATTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR GCA 90 bp | GTTCAGGAGAATGGATGCCTTTTCACAAATCTCTCAGGTTCACAGTaGTTAAGCCAAGAGTATAGGTCCCTGAGGAAGAGAGGTGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: VQENGCLFTNLSGSQ*LSQEYRSLRKRGGQ Trigger: CTGGCCACCTCTCTTCCTCAGGGACCTATACTCTTGGCTTAAGCACTGTGAACCTGAGAGATTTGTGAAAAGGCATCCATTCTCCTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR TCA 90 bp | ATTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTaGTGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTATACTCA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTICNGI*CPLLVCLKTATVYS Trigger: TGAGTATACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR CCA 90 bp | AGATATTCCTTATGGCAAGGAAGAGGTGACAGAGTCAGGAAGAAATaGGTGCGCGCGTGCACACAAACACACACATGCATACACACTATA | + |
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Preference number: 1 (lower is better) Translates to: RYSLWQGRGDRVRKK*VRACTQTHTCIHTI Trigger: TATAGTGTGTATGCATGTGTGTGTTTGTGTGCACGCGCGCACCCATTTCTTCCTGACTCTGTCACCTCTTCCTTGCCATAAGGAATATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR CCA 90 bp | TCTCTAATTTCTCTTATTTCTGTGAACAGCACTGAGACTGGACTTTaGAAACCAGCTTGTCCCTCAAGGCAGGGCTCTCTATACAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: SLISLISVNSTETGL*KPACPSRQGSLYKL Trigger: CAGCTTGTATAGAGAGCCCTGCCTTGAGGGACAAGCTGGTTTCCAAAGTCCAGTCTCAGTGCTGTTCACAGAAATAAGAGAAATTAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR TCA 90 bp | GTAACTGAGGATGTCCTGAATCTAGCTCAGGCTGCCTCAAACTATTaGTCCTCTTGCCTCAGTTTCTTAAATTCTGAGGTTACAGTAGTG | + |
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Preference number: 1 (lower is better) Translates to: VTEDVLNLAQAASNY*SSCLSFLNSEVTVV Trigger: CACTACTGTAACCTCAGAATTTAAGAAACTGAGGCAAGAGGATCAATAGTTTGAGGCAGCCTGAGCTAGATTCAGGACATCCTCAGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR CCA 90 bp | TACTCAAGTTCATACTTTCACAGGAAAGCCCACTGTAGTCGGAGATaGGGAAGCAGCTCTCTAATTTCTCTTATTTCTGTGAACAGCACT | + |
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Preference number: 1 (lower is better) Translates to: YSSSYFHRKAHCSRR*GSSSLISLISVNST Trigger: AGTGCTGTTCACAGAAATAAGAGAAATTAGAGAGCTGCTTCCCCATCTCCGACTACAGTGGGCTTTCCTGTGAAAGTATGAACTTGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR CCA 90 bp | GGTTATTCTTGGCTGTATAGTTCAAGACCACCCACGCACACATACTaGGAGAACAAGAGAAATACTCAAGTTCATACTTTCACAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: GYSWLYSSRPPTHTY*ENKRNTQVHTFTGK Trigger: CTTTCCTGTGAAAGTATGAACTTGAGTATTTCTCTTGTTCTCCCAGTATGTGTGCGTGGGTGGTCTTGAACTATACAGCCAAGAATAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR CCA 90 bp | AAACAAGTCCTTGGAAAAAGTCTTGTGGGAATGTGTTCAGGAGAATaGATGCCTTTTCACAAATCTCTCAGGTTCACAGTGCTTAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: KQVLGKSLVGMCSGE*MPFHKSLRFTVLKP Trigger: TGGCTTAAGCACTGTGAACCTGAGAGATTTGTGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTTTCCAAGGACTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR CAA 90 bp | ATGAGAGTGGGGCCCTCCCAGCTTGGAGTGACAACCCTCAGGGAATaGCTATGGAATTGCTCCCAGGCTCATACGAGCCCTGCCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: MRVGPSQLGVTTLRE*LWNCSQAHTSPATS Trigger: GCTGGTGGCAGGGCTCGTATGAGCCTGGGAGCAATTCCATAGCAATTCCCTGAGGGTTGTCACTCCAAGCTGGGAGGGCCCCACTCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR-3UTR TCA 90 bp | CAAGGAAGAGGTGACAGAGTCAGGAAGAAATGGGTGCGCGCGTGCACACAAACACCAGAAAGATGGGGATaGGAGTGGGGCCCTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: QGRGDRVRKKWVRACTQTPERWG*EWGPPS Trigger: GCTGGGAGGGCCCCACTCTCATCCCCATCTTTCTGG...TGTTTGTGTGCACGCGCGCACCCATTTCTTCCTGACTCTGTCACCTCTTCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR-3UTR GCA 90 bp | CAGGATCAGCCAGCCTGGAAAAGGATCTGTGAGACAGGAAAAGGACCAGCCATATCAGAAAACCCAGCTTaGCAGCACGGCAGGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: QDQPAWKRICETGKGPAISENPA*QHGRPS Trigger: GCTGGGCCTGCCGTGCTGGCAAGCTGGGTTTTCTGA...TATGGCTGGTCCTTTTCCTGTCTCACAGATCCTTTTCCAGGCTGGCTGATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTCTGCCTTTAGGAGCTCACCAAAGCTGGCCAAGGAGCTGGGAAAGCCATCCCCACAGACCAATGTaGACTGGCTGTCTCAATTCT | + |
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Preference number: 2 (lower is better) Translates to: WALPLGAHQSWPRSWESHPHRPM*TGCLNS Trigger: AGAATTGAGACAGCCAGTCCACATTGGTCTGTGGGG...ATGGCTTTCCCAGCTCCTTGGCCAGCTTTGGTGAGCTCCTAAAGGCAGAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR CCA 90 bp | GATGAAGTTAGAGTAACTGAGGATGTCCTGAATCTAGCTCAGGCTGCCTCAAACGGGGCCCTCCCAGCTTaGAGTGACAACCCTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: DEVRVTEDVLNLAQAASNGALPA*SDNPQG Trigger: TCCCTGAGGGTTGTCACTCCAAGCTGGGAGGGCCCC...GTTTGAGGCAGCCTGAGCTAGATTCAGGACATCCTCAGTTACTCTAACTTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR-3UTR TCA 90 bp | CAGGATCAGCCAGCCTGGAAAAGGATCTGTGAGACAGGAAAAGGACCAGCCATAAAAGCCCAGCTGGCCTaGCTGAAAAGGCCTTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: QDQPAWKRICETGKGPAIKAQLA*LKRPFA Trigger: TGCAAAAGGCCTTTTCAGTCAGGCCAGCTGGGCTTT...TATGGCTGGTCCTTTTCCTGTCTCACAGATCCTTTTCCAGGCTGGCTGATCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR TCA 90 bp | GCCCACTGTAGTCGGAGATGGGGAAGCAGCTCTCTAATTTCTCTTATTTCTGTGGGCCCAGCATGGGGATaGAAGACCAACTCCAAGATT | + |
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Preference number: 2 (lower is better) Translates to: AHCSRRWGSSSLISLISVGPAWG*KTNSKI Trigger: AATCTTGGAGTTGGTCTTTCATCCCCATGCTGGGCC...CACAGAAATAAGAGAAATTAGAGAGCTGCTTCCCCATCTCCGACTACAGTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR-3UTR TCA 90 bp | AGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCAGCAACCACATGGTTCTGTGAACAGCACTaGGACTGGACTTTGGAAACC | + |
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Preference number: 2 (lower is better) Translates to: RALTALPEVLSSIPATTWFCEQH*DWTLET Trigger: GGTTTCCAAAGTCCAGTCTCAGTGCTGTTCACAGAA...CCATGTGGTTGCTGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR-3UTR TCA 90 bp | CACTCTTCTCCCAGTGTTTGGGTTCTGGGTAGATACCCACTGAGAAAGTTTCAACCCCATGACTTCTGCTaGCACCATGGCATCACACAG | + |
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Preference number: 2 (lower is better) Translates to: HSSPSVWVLGRYPLRKFQPHDFC*HHGITQ Trigger: CTGTGTGATGCCATGGTGTCAGCAGAAGTCATGGGG...TTGAAACTTTCTCAGTGGGTATCTACCCAGAACCCAAACACTGGGAGAAGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGGAGCCATCACAGGATCAGCCAGCCTGGAAAAGGATCTGTGAGACAGGAGTAGATATCACACAGTaGAGTAGACATCACACAGTG | + |
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Preference number: 2 (lower is better) Translates to: WQEPSQDQPAWKRICETGVDITQ*SRHHTV Trigger: CACTGTGTGATGTCTACTGCACTGTGTGATATCTAC...TCCTGTCTCACAGATCCTTTTCCAGGCTGGCTGATCCTGTGATGGCTCCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGAATGGATGCCTTTTCACAAATCTCTCAGGTTCACAGTGCTTAAGCCAAAGCAAGGAGAAGCCCTaGCCCACTCTTCTCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: QENGCLFTNLSGSQCLSQSKEKP*PTLLPV Trigger: CACTGGGAGAAGAGTGGGGCAGGGCTTCTCCTTGCT...TTGGCTTAAGCACTGTGAACCTGAGAGATTTGTGAAAAGGCATCCATTCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR CCA 90 bp | CACTCTTCTCCCAGTGTTTGGGTTCTGGGTAGATACCCACTGAGAAAGTTTCAAGCAGTCACTGAGGTCTaGGCTCTGCCTTTAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: HSSPSVWVLGRYPLRKFQAVTEV*ALPLGA Trigger: AGCTCCTAAAGGCAGAGCCCAGACCTCAGTGACTGC...TTGAAACTTTCTCAGTGGGTATCTACCCAGAACCCAAACACTGGGAGAAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR CAA 90 bp | AGATTAACTGTAACTGACCAGGAGAGTCTTGGTGAGTCGCTTCCCTaGGTTGCCAGCTTATGTGCTTCCAGAAAGATGGGGATGAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: RLTVTDQESLGESLP*VASLCASRKMGMRV Trigger: CACTCTCATCCCCATCTTTCTGGAAGCACATAAGCTGGCAACCAAGGGAAGCGACTCACCAAGACTCTCCTGGTCAGTTACAGTTAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR-3UTR TCA 90 bp | GGAGAACAAGAGAAATACTCAAGTTCATACTTTCACAGGAAAGCCCACTGTAGTCCTCCCAGCTTGGAGTaGCAACCCTCAGGGAATTGC | + |
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Preference number: 2 (lower is better) Translates to: GEQEKYSSSYFHRKAHCSPPSLE*QPSGNC Trigger: GCAATTCCCTGAGGGTTGTCACTCCAAGCTGGGAGG...ACTACAGTGGGCTTTCCTGTGAAAGTATGAACTTGAGTATTTCTCTTGTTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR-3UTR TCA 90 bp | CAGGATCAGCCAGCCTGGAAAAGGATCTGTGAGACAGGAAAAGGACCAGCCATAGCCAGTGAAGATCCTTaGCATAGAAACACATTCTCT | + |
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Preference number: 2 (lower is better) Translates to: QDQPAWKRICETGKGPAIASEDP*HRNTFS Trigger: AGAGAATGTGTTTCTATGTCAAGGATCTTCACTGGC...TATGGCTGGTCCTTTTCCTGTCTCACAGATCCTTTTCCAGGCTGGCTGATCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR GCA 90 bp | ACTCAAGTTCATACTTTCACAGGAAAGCCCACTGTAGTCGGAGATGGGGAAGCAGGTTGCCAGCTTATGTaGTTCCAGAAAGATGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: TQVHTFTGKPTVVGDGEAGCQLM*FQKDGD Trigger: ATCCCCATCTTTCTGGAAGCACATAAGCTGGCAACC...TGCTTCCCCATCTCCGACTACAGTGGGCTTTCCTGTGAAAGTATGAACTTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR-3UTR GCA 90 bp | CAGGATCAGCCAGCCTGGAAAAGGATCTGTGAGACAGGAAAAGGACCAGCCATACTCTGTCACTCAATGTaGCTTCAGAAATCTAGACAG | + |
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Preference number: 2 (lower is better) Translates to: QDQPAWKRICETGKGPAILCHSM*LQKSRQ Trigger: CTGTCTAGATTTCTGAAGGCACATTGAGTGACAGAG...TATGGCTGGTCCTTTTCCTGTCTCACAGATCCTTTTCCAGGCTGGCTGATCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR CCA 90 bp | GAAAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCACAAATCTCGGAGCTCACCAAAGCTaGCCAAGGAGCTGGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: EKVLWECVQENGCLFTNLGAHQS*PRSWES Trigger: GCTTTCCCAGCTCCTTGGCCAGCTTTGGTGAGCTCC...GAGATTTGTGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR CCA 90 bp | AAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCACAAATCTCTCCCTGAGGAAGAGAGGTaGCCAGCAAGGAGAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: KSLVGMCSGEWMPFHKSLPEEER*PARRSP Trigger: AGGGCTTCTCCTTGCTGGCCACCTCTCTTCCTCAGG...GAGAGATTTGTGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR TCA 90 bp | GAAAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCACAAATCTCTTCCTCCTCGGGCTCTaGCCAACTAGGGCACAAATG | + |
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Preference number: 2 (lower is better) Translates to: EKVLWECVQENGCLFTNLFLLGL*PTRAQM Trigger: CATTTGTGCCCTAGTTGGTCAGAGCCCGAGGAGGAA...GAGATTTGTGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGAATGGATGCCTTTTCACAAATCTCTCAGGTTCACAGTGCTTAAGCCAACTGGAAAAGGATCTGTaGGACAGGAAAAGGACCAGC | + |
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Preference number: 2 (lower is better) Translates to: QENGCLFTNLSGSQCLSQLEKDL*DRKRTS Trigger: GCTGGTCCTTTTCCTGTCTCACAGATCCTTTTCCAG...TTGGCTTAAGCACTGTGAACCTGAGAGATTTGTGAAAAGGCATCCATTCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR CCA 90 bp | GATGAAGTTAGAGTAACTGAGGATGTCCTGAATCTAGCTCAGGCTGCCTCAAACCATACACACTATAGCTaGCCCAGCATGGGGATGAAA | + |
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Preference number: 2 (lower is better) Translates to: DEVRVTEDVLNLAQAASNHTHYS*PSMGMK Trigger: TTTCATCCCCATGCTGGGCCAGCTATAGTGTGTATG...GTTTGAGGCAGCCTGAGCTAGATTCAGGACATCCTCAGTTACTCTAACTTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR-3UTR CCA 90 bp | AAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCACAAATCTCTCCAGGATCAGCCAGCCTaGAAAAGGATCTGTGAGACA | + |
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Preference number: 2 (lower is better) Translates to: KSLVGMCSGEWMPFHKSLQDQPA*KRICET Trigger: TGTCTCACAGATCCTTTTCCAGGCTGGCTGATCCTG...GAGAGATTTGTGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGAACAAGAGAAATACTCAAGTTCATACTTTCACAGGAAAGCCCACTGTAATGGCAAGGAAGAGGTaGCAGAGTCAGGAAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: WENKRNTQVHTFTGKPTVMARKR*QSQEEM Trigger: CATTTCTTCCTGACTCTGTCACCTCTTCCTTGCCAT...TACAGTGGGCTTTCCTGTGAAAGTATGAACTTGAGTATTTCTCTTGTTCTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTTGGAAAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCATGGGTAGATACCCACTaGGAAAGTTTCAATGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: SPWKKSCGNVFRRMDAFSWVDTH*ESFNAV Trigger: GACTGCATTGAAACTTTCTCAGTGGGTATCTACCCA...TGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTTTCCAAGGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGAACAAGAGAAATACTCAAGTTCATACTTTCACAGGAAAGCCCACTGTAACTGAGACTGGACTTTaGAAACCAGCTTGTCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: WENKRNTQVHTFTGKPTVTETGL*KPACPS Trigger: TGAGGGACAAGCTGGTTTCCAAAGTCCAGTCTCAGT...TACAGTGGGCTTTCCTGTGAAAGTATGAACTTGAGTATTTCTCTTGTTCTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR-3UTR CCA 90 bp | GAAAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCACAAATCTCTCTTCTCCCAGTGTTTaGGTTCTGGGTAGATACCCA | + |
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Preference number: 2 (lower is better) Translates to: EKVLWECVQENGCLFTNLSSPSV*VLGRYP Trigger: TGGGTATCTACCCAGAACCCAAACACTGGGAGAAGA...GAGATTTGTGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR CCA 90 bp | GAAAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCACAAATCTCATGCTTAAGGGGATGTaGACCAAGTGCAGCCATATA | + |
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Preference number: 2 (lower is better) Translates to: EKVLWECVQENGCLFTNLMLKGM*TKCSHI Trigger: TATATGGCTGCACTTGGTCCACATCCCCTTAAGCAT...GAGATTTGTGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR CCA 90 bp | ATAATTCTCAGAATTAAAAATCTCAGAGCCAGGCACTACATATCTGTAATCCCAGTTCAAGGTTATTCTTaGCTGTATAGTTCAAGACCA | + |
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Preference number: 2 (lower is better) Translates to: IILRIKNLRARHYISVIPVQGYS*LYSSRP Trigger: TGGTCTTGAACTATACAGCCAAGAATAACCTTGAAC...TGGGATTACAGATATGTAGTGCCTGGCTCTGAGATTTTTAATTCTGAGAATTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR CCA 72 bp | GAGGTCTGGGCTCTGCCTTTAGGAGCTCACCAAAGCTaGCCAAGGAGCTGGGAAAGCCATGGATGGAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: EVWALPLGAHQS*PRSWESHGWRL Trigger: GAGCCTCCATCCATGGCTTTCCCAGCTCCTTGGCCAGCTTTGGTGAGCTCCTAAAGGCAGAGCCCAGACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR GCA 72 bp | CTTGGAGTGACAACCCTCAGGGAATTGCTATGGAATTaGTCCCAGGCTCATACGAGCCCTGCCACCAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: LGVTTLRELLWN*SQAHTSPATSS Trigger: TGAGCTGGTGGCAGGGCTCGTATGAGCCTGGGAGCAATTCCATAGCAATTCCCTGAGGGTTGTCACTCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR CCA 72 bp | ACACCAGTGTTGGTGGCCCCACAGACCAATGTGGACTaGCTGTCTCAATTCTCAGCCCTCAGGTACAACCCA | + |
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Preference number: 3 (lower is better) Translates to: TPVLVAPQTNVD*LSQFSALRYNP Trigger: TGGGTTGTACCTGAGGGCTGAGAATTGAGACAGCCAGTCCACATTGGTCTGTGGGGCCACCAACACTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR CCA 72 bp | AGCTCACCAAAGCTGGCCAAGGAGCTGGGAAAGCCATaGATGGAGGCTCTAACACAGGAGCAGTGTATGGCA | + |
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Preference number: 3 (lower is better) Translates to: SSPKLAKELGKP*MEALTQEQCMA Trigger: TGCCATACACTGCTCCTGTGTTAGAGCCTCCATCCATGGCTTTCCCAGCTCCTTGGCCAGCTTTGGTGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
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| 3UTR-3UTR CAA 90 bp | CAAGGAAGAGGTGACAGAGTCAGGAAGAAATGGGTGCGCGCGTGCACACAAACAGGTGAGTCGCTTCCCTaGGTTGCCAGCTTATGTGCT | + |
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Preference number: 3 (lower is better) Translates to: QGRGDRVRKKWVRACTQTGESLP*VASLCA Trigger: AGCACATAAGCTGGCAACCAAGGGAAGCGACTCACC...TGTTTGTGTGCACGCGCGCACCCATTTCTTCCTGACTCTGTCACCTCTTCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
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| 3UTR GCA 72 bp | AGCACGGCAGGCCCAGCCAGCCTCTGTCACTCAATGTaGCTTCAGAAATCTAGACAGCACTGTTCCACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: STAGPASLCHSM*LQKSRQHCSTK Trigger: CTTTGTGGAACAGTGCTGTCTAGATTTCTGAAGGCACATTGAGTGACAGAGGCTGGCTGGGCCTGCCGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| 3UTR CCA 72 bp | CAGAAAGATGGGGATGAGAGTGGGGCCCTCCCAGCTTaGAGTGACAACCCTCAGGGAATTGCTATGGAATTG | + |
|
Preference number: 3 (lower is better) Translates to: QKDGDESGALPA*SDNPQGIAMEL Trigger: CAATTCCATAGCAATTCCCTGAGGGTTGTCACTCCAAGCTGGGAGGGCCCCACTCTCATCCCCATCTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| 3UTR CCA 72 bp | AATGGCAGCCACCTGGTGGGGATGCTTAAGGGGATGTaGACCAAGTGCAGCCATATAGCCAGTGAAGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: NGSHLVGMLKGM*TKCSHIASEDP Trigger: AGGATCTTCACTGGCTATATGGCTGCACTTGGTCCACATCCCCTTAAGCATCCCCACCAGGTGGCTGCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| 3UTR CCA 72 bp | AGTGTATGGCAGGAGCCATCACAGGATCAGCCAGCCTaGAAAAGGATCTGTGAGACAGGAAAAGGACCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SVWQEPSQDQPA*KRICETGKGPA Trigger: GGCTGGTCCTTTTCCTGTCTCACAGATCCTTTTCCAGGCTGGCTGATCCTGTGATGGCTCCTGCCATACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGAGAGATGACTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGGGAATTGCTATGGAATaGCTCCCAGGCTCATACGAG | + |
|
Preference number: 3 (lower is better) Translates to: AGEMTQRLRALTALPEVLGIAME*LPGSYE Trigger: CTCGTATGAGCCTGGGAGCAATTCCATAGCAATTCC...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGTCATCTCTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| 3UTR GCA 72 bp | GGCTGGAGAGATGACTCAGCGGTTAAGAGCACTGACTaGTCTTCCAGAGGTCCTGAGTTCAATTCCAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GWRDDSAVKSTD*SSRGPEFNSSN Trigger: GTTGCTGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGTCATCTCTCCAGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGAAGAGGTGACAGAGTCAGGAAGAAATGGGTGCGCGCGTGCACACAAACAACAACCCTCAGGGAATaGCTATGGAATTGCTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QGRGDRVRKKWVRACTQTTTLRE*LWNCSQ Trigger: CTGGGAGCAATTCCATAGCAATTCCCTGAGGGTTGT...TGTTTGTGTGCACGCGCGCACCCATTTCTTCCTGACTCTGTCACCTCTTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| 3UTR-3UTR CAA 90 bp | ACTCAAGTTCATACTTTCACAGGAAAGCCCACTGTAGTCGGAGATGGGGAAGCAACTTTGGAAACCAGCTaGTCCCTCAAGGCAGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: TQVHTFTGKPTVVGDGEATLETS*SLKAGL Trigger: GAGCCCTGCCTTGAGGGACAAGCTGGTTTCCAAAGT...TGCTTCCCCATCTCCGACTACAGTGGGCTTTCCTGTGAAAGTATGAACTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| 3UTR TCA 72 bp | TGCTCCCAGGCTCATACGAGCCCTGCCACCAGCTCATaGTCAAGACAATTTACTGTCCATCTTCCCTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: CSQAHTSPATSS*SRQFTVHLPSI Trigger: GATTGAGGGAAGATGGACAGTAAATTGTCTTGATCATGAGCTGGTGGCAGGGCTCGTATGAGCCTGGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| 3UTR TCA 72 bp | ACAGGAAAAGGACCAGCCATACCCCATGACTTCTGCTaGCACCATGGCATCACACAGTGCAGTAGACATCAC | + |
|
Preference number: 3 (lower is better) Translates to: TGKGPAIPHDFC*HHGITQCSRHH Trigger: GTGATGTCTACTGCACTGTGTGATGCCATGGTGTCAGCAGAAGTCATGGGGTATGGCTGGTCCTTTTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| 3UTR TCA 72 bp | TTCCAGAATTCATGGGGCAGAGGCAGGGGACCTTTGTaGGTGAGTTCCAAGCTAGCTAGGGCTATAACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FQNSWGRGRGPL*VSSKLARAITV Trigger: CACTGTTATAGCCCTAGCTAGCTTGGAACTCACTCACAAAGGTCCCCTGCCTCTGCCCCATGAATTCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| 3UTR CCA 72 bp | CAAGGAGAAGCCCTGCCCCACTCTTCTCCCAGTGTTTaGGTTCTGGGTAGATACCCACTGAGAAAGTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QGEALPHSSPSV*VLGRYPLRKFQ Trigger: TTGAAACTTTCTCAGTGGGTATCTACCCAGAACCCAAACACTGGGAGAAGAGTGGGGCAGGGCTTCTCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| 3UTR TCA 72 bp | GGTAGATACCCACTGAGAAAGTTTCAATGCAGTCACTaGGGTCTGGGCTCTGCCTTTAGGAGCTCACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GRYPLRKFQCSH*GLGSAFRSSPK Trigger: CTTTGGTGAGCTCCTAAAGGCAGAGCCCAGACCTCAGTGACTGCATTGAAACTTTCTCAGTGGGTATCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| 3UTR TCA 72 bp | TCCTGCTTACCACTGAAGCACAGGGTTTGGTTGTCATaGCCACTGCCACTATGTATAACAAGTGCTGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: SCLPLKHRVWLS*PLPLCITSADF Trigger: AAAGTCAGCACTTGTTATACATAGTGGCAGTGGTCATGACAACCAAACCCTGTGCTTCAGTGGTAAGCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| 3UTR CCA 72 bp | ACTGAGGCAGAAGAATCAGGAGTTCAAGGTTATTCTTaGCTGTATAGTTCAAGACCACCCACGCACACATAC | + |
|
Preference number: 3 (lower is better) Translates to: TEAEESGVQGYS*LYSSRPPTHTY Trigger: GTATGTGTGCGTGGGTGGTCTTGAACTATACAGCCAAGAATAACCTTGAACTCCTGATTCTTCTGCCTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| 3UTR TCA 72 bp | CAGCTCTCTAATTTCTCTTATTTCTGTGAACAGCACTaGGACTGGACTTTGGAAACCAGCTTGTCCCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QLSNFSYFCEQH*DWTLETSLSLK Trigger: CTTGAGGGACAAGCTGGTTTCCAAAGTCCAGTCTCAGTGCTGTTCACAGAAATAAGAGAAATTAGAGAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| 3UTR TCA 72 bp | TGGACCAAGTGCAGCCATATAGCCAGTGAAGATCCTTaGCATAGAAACACATTCTCTACTTCCACCTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: WTKCSHIASEDP*HRNTFSTSTSE Trigger: TTCTGAGGTGGAAGTAGAGAATGTGTTTCTATGTCAAGGATCTTCACTGGCTATATGGCTGCACTTGGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| 3UTR CCA 72 bp | TCATACTTTCACAGGAAAGCCCACTGTAGTCGGAGATaGGGAAGCAGCTCTCTAATTTCTCTTATTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SYFHRKAHCSRR*GSSSLISLISV Trigger: CACAGAAATAAGAGAAATTAGAGAGCTGCTTCCCCATCTCCGACTACAGTGGGCTTTCCTGTGAAAGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| 3UTR CCA 72 bp | TGGCTGTATAGTTCAAGACCACCCACGCACACATACTaGGAGAACAAGAGAAATACTCAAGTTCATACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: WLYSSRPPTHTY*ENKRNTQVHTF Trigger: GAAAGTATGAACTTGAGTATTTCTCTTGTTCTCCCAGTATGTGTGCGTGGGTGGTCTTGAACTATACAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| 3UTR GCA 72 bp | GAAAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATaGCTTTTCACAAATCTCTCAGGTTCACAGTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: EKVLWECVQENG*LFTNLSGSQCL Trigger: TAAGCACTGTGAACCTGAGAGATTTGTGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR CCA 90 bp | CCACAAAGCCCAGCTGGCCTGACTGAAAAGGCCTTTTGCATTCATGTAGCCAGCTGCCCAGCTTCTTCCTaGGGCCCTTGCTCCCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: PQSPAGLTEKAFCIHVASCPASS*GPCSPT Trigger: TGTCGGGGAGCAAGGGCCCCAGGAAGAAGCTGGGCA...GCTGGCTACATGAATGCAAAAGGCCTTTTCAGTCAGGCCAGCTGGGCTTTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| 3UTR CAA 72 bp | GGGCCCTCCCAGCTTGGAGTGACAACCCTCAGGGAATaGCTATGGAATTGCTCCCAGGCTCATACGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPSQLGVTTLRE*LWNCSQAHTSP Trigger: AGGGCTCGTATGAGCCTGGGAGCAATTCCATAGCAATTCCCTGAGGGTTGTCACTCCAAGCTGGGAGGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR TCA 90 bp | TGGGCTCTGCCTTTAGGAGCTCACCAAAGCTGGCCAAGGAGCTGGGAAAGCCATGGGACAGGACATCTTTaGAGAGGATGCCCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WALPLGAHQSWPRSWESHGTGHL*RGCPPA Trigger: AGCAGGAGGGCATCCTCTTCAAAGATGTCCTGTCCC...ATGGCTTTCCCAGCTCCTTGGCCAGCTTTGGTGAGCTCCTAAAGGCAGAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR CCA 90 bp | TATTCCTTATGGCAAGGAAGAGGTGACAGAGTCAGGAAGAAATGGGTGCGCGCGTGCCCAGCTTCTTCCTaGGGCCCTTGCTCCCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: YSLWQGRGDRVRKKWVRACPASS*GPCSPT Trigger: TGTCGGGGAGCAAGGGCCCCAGGAAGAAGCTGGGCA...CGCGCGCACCCATTTCTTCCTGACTCTGTCACCTCTTCCTTGCCATAAGGAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| 3UTR CAA 72 bp | GCTTGGAGTGACAACCCTCAGGGAATTGCTATGGAATaGCTCCCAGGCTCATACGAGCCCTGCCACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AWSDNPQGIAME*LPGSYEPCHQL Trigger: GAGCTGGTGGCAGGGCTCGTATGAGCCTGGGAGCAATTCCATAGCAATTCCCTGAGGGTTGTCACTCCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR GCA 90 bp | ACCTGCTCTGAGACAGGACTGGGGTTAAAGGCAGTGCTTGTTTGCTTGGTTGGTTCCTGCTTGGCTAGCTaGCCAGCTTCTTCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCSETGLGLKAVLVCLVGSCLAS*PASSWG Trigger: GCCCCAGGAAGAAGCTGGGCAGCTAGCCAAGCAGGA...ACCAACCAAGCAAACAAGCACTGCCTTTAACCCCAGTCCTGTCTCAGAGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR GCA 90 bp | CAAGGAAGAGGTGACAGAGTCAGGAAGAAATGGGTGCGCGCGTGCACACAAACAAAGAGGATGCCCTCCTaGTTGGCTAGCTGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGRGDRVRKKWVRACTQTKRMPS*LASCPA Trigger: AGCTGGGCAGCTAGCCAAGCAGGAGGGCATCCTCTT...TGTTTGTGTGCACGCGCGCACCCATTTCTTCCTGACTCTGTCACCTCTTCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR TCA 90 bp | TCTGTGAACAGCACTGAGACTGGACTTTGGAAACCAGCTTGTCCCTCAAGGCAGGGGACAGGACATCTTTaGAGAGGATGCCCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVNSTETGLWKPACPSRQGTGHL*RGCPPA Trigger: AGCAGGAGGGCATCCTCTTCAAAGATGTCCTGTCCC...CTGCCTTGAGGGACAAGCTGGTTTCCAAAGTCCAGTCTCAGTGCTGTTCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR CCA 90 bp | GAGTCGCTTCCCTTGGTTGCCAGCTTATGTGCTTCCAGAAAGATGGGGATGAGAATGCGGAGGATGTTCTaGAAGTCCAGCTGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ESLPLVASLCASRKMGMRMRRMF*KSSCRD Trigger: GTCCCTGCAGCTGGACTTCCAGAACATCCTCCGCAT...TCTCATCCCCATCTTTCTGGAAGCACATAAGCTGGCAACCAAGGGAAGCGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR CCA 90 bp | TGGGCTCTGCCTTTAGGAGCTCACCAAAGCTGGCCAAGGAGCTGGGAAAGCCATATCATGTTGCTAATCTaGTTGTTGCCCAGTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: WALPLGAHQSWPRSWESHIMLLI*LLPSDS Trigger: GCTGTCACTGGGCAACAACCAGATTAGCAACATGAT...ATGGCTTTCCCAGCTCCTTGGCCAGCTTTGGTGAGCTCCTAAAGGCAGAGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGCTCTGAGACAGGACTGGGGTTAAAGGCAGTGCTTGTTTGCTTGGTTGGTTTGCTCCCCGACAGCTaGTTTGAGCATGTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: TCSETGLGLKAVLVCLVGLLPDS*FEHVII Trigger: GATGATGACATGCTCAAAGCAGCTGTCGGGGAGCAA...ACCAACCAAGCAAACAAGCACTGCCTTTAACCCCAGTCCTGTCTCAGAGCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR CCA 90 bp | GAGTCGCTTCCCTTGGTTGCCAGCTTATGTGCTTCCAGAAAGATGGGGATGAGATGGAGATCCGGTTATTaGACAAGCTCAGGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESLPLVASLCASRKMGMRWRSGY*TSSGPP Trigger: TGGAGGACCTGAGCTTGTCCAATAACCGGATCTCCA...TCTCATCCCCATCTTTCTGGAAGCACATAAGCTGGCAACCAAGGGAAGCGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR GCA 90 bp | AGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCAGCAACCACATGGTTCAGGTTCTCAAACTaGCAGAGGTTATCGATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RALTALPEVLSSIPATTWFRFSN*QRLSMR Trigger: CCGCATCGATAACCTCTGGCAGTTTGAGAACCTGAA...CCATGTGGTTGCTGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| 3UTR CAA 72 bp | CCCACCAGTCTCCTGCTTACCACTGAAGCACAGGGTTaGGTTGTCATGACCACTGCCACTATGTATAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTSLLLTTEAQG*VVMTTATMYNK Trigger: CTTGTTATACATAGTGGCAGTGGTCATGACAACCAAACCCTGTGCTTCAGTGGTAAGCAGGAGACTGGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR GCA 90 bp | ATCACACAATGTATTAACCTTCCATCCCTGGGGAATCCTCATCTTTCCCAAATTTCCTGCTTGGCTAGCTaGCCAGCTTCTTCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITQCINLPSLGNPHLSQISCLAS*PASSWG Trigger: GCCCCAGGAAGAAGCTGGGCAGCTAGCCAAGCAGGA...AATTTGGGAAAGATGAGGATTCCCCAGGGATGGAAGGTTAATACATTGTGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGAGATGACTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGATGTTGTTGTTCAGTTaGAGCTTCTTCAGGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGEMTQRLRALTALPEVLMLLFS*SFFRFS Trigger: TGAGAACCTGAAGAAGCTGCAACTGAACAACAACAT...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGTCATCTCTCCAGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCACAAATCTCTCCCAGCTTCTCCTGCTTaGCCTGCTCCTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSLVGMCSGEWMPFHKSLPASPA*PAPPPA Trigger: AGCTGGAGGAGGAGCAGGCCAAGCAGGAGAAGCTGG...GAGAGATTTGTGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR GCA 90 bp | CAGGAGAATGGATGCCTTTTCACAAATCTCTCAGGTTCACAGTGCTTAAGCCAAAAGGGGCCGTTCAGGTaGTCAACAAACGCCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QENGCLFTNLSGSQCLSQKGPFR*STNAIL Trigger: CAAGATGGCGTTTGTTGAGCACCTGAACGGCCCCTT...TTGGCTTAAGCACTGTGAACCTGAGAGATTTGTGAAAAGGCATCCATTCTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCACAAATCTCTCGGATGCCCTCCTGCTTaGCTAGCTGCCCAGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSLVGMCSGEWMPFHKSLGCPPA*LAAQLL Trigger: AAGAAGCTGGGCAGCTAGCCAAGCAGGAGGGCATCC...GAGAGATTTGTGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR TCA 90 bp | AGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCAGCAACCACATGGAAAGATAGGCATAGATaGACATCTTGTACTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RALTALPEVLSSIPATTWKDRHR*TSCTPL Trigger: CAGAGGAGTACAAGATGTTCATCTATGCCTATCTTT...CCATGTGGTTGCTGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR GCA 90 bp | AATTGCTTAACCTCTGGGGTTACTAATGGCAGCCACCTGGTGGGGATGCTTAAGATGTTGTTGTTCAGTTaGAGCTTCTTCAGGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NCLTSGVTNGSHLVGMLKMLLFS*SFFRFS Trigger: TGAGAACCTGAAGAAGCTGCAACTGAACAACAACAT...CTTAAGCATCCCCACCAGGTGGCTGCCATTAGTAACCCCAGAGGTTAAGCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTGGAAAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCACATCTTGTACTCCTCTaGCTCAGAAACGGGATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPWKKSCGNVFRRMDAFSHLVLL*LRNGIP Trigger: GGGAATCCCGTTTCTGAGGCAGAGGAGTACAAGATG...TGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTTTCCAAGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTGGAAAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCACATCCTCGGAATACATaGTGTCAAACAGGAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPWKKSCGNVFRRMDAFSHPRNT*CQTGRG Trigger: GCCCCTTCCTGTTTGACAGCATGTATTCCGAGGATG...TGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTTTCCAAGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCACAAATCTCTCTTGCTCCCCGACAGCTaGTTTGAGCATGTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: KSLVGMCSGEWMPFHKSLLLPDS*FEHVII Trigger: GATGATGACATGCTCAAAGCAGCTGTCGGGGAGCAA...GAGAGATTTGTGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR CCA 90 bp | ATAATTCTCAGAATTAAAAATCTCAGAGCCAGGCACTACATATCTGTAATCCCAGGATGCCCTCCTGCTTaGCTAGCTGCCCAGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IILRIKNLRARHYISVIPGCPPA*LAAQLL Trigger: AAGAAGCTGGGCAGCTAGCCAAGCAGGAGGGCATCC...TGGGATTACAGATATGTAGTGCCTGGCTCTGAGATTTTTAATTCTGAGAATTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR CCA 90 bp | TTAACCTTCCATCCCTGGGGAATCCTCATCTTTCCCAAATTACAATTCTCGTTTTGGAGATCCGGTTATTaGACAAGCTCAGGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTFHPWGILIFPKLQFSFWRSGY*TSSGPP Trigger: TGGAGGACCTGAGCTTGTCCAATAACCGGATCTCCA...AAACGAGAATTGTAATTTGGGAAAGATGAGGATTCCCCAGGGATGGAAGGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCACAAATCTCTCTTCAGGTTCTCAAACTaGCAGAGGTTATCGATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLVGMCSGEWMPFHKSLFRFSN*QRLSMR Trigger: CCGCATCGATAACCTCTGGCAGTTTGAGAACCTGAA...GAGAGATTTGTGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR CCA 90 bp | TGGGAGAACAAGAGAAATACTCAAGTTCATACTTTCACAGGAAAGCCCACTGTAATCATGTTGCTAATCTaGTTGTTGCCCAGTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: WENKRNTQVHTFTGKPTVIMLLI*LLPSDS Trigger: GCTGTCACTGGGCAACAACCAGATTAGCAACATGAT...TACAGTGGGCTTTCCTGTGAAAGTATGAACTTGAGTATTTCTCTTGTTCTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR TCA 90 bp | AGTCCTTGGAAAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCAAAAGATAGGCATAGATaGACATCTTGTACTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPWKKSCGNVFRRMDAFSKDRHR*TSCTPL Trigger: CAGAGGAGTACAAGATGTTCATCTATGCCTATCTTT...TGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTTTCCAAGGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR GCA 90 bp | ATAATTCTCAGAATTAAAAATCTCAGAGCCAGGCACTACATATCTGTAATCCCACATCTTGTACTCCTCTaGCTCAGAAACGGGATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IILRIKNLRARHYISVIPHLVLL*LRNGIP Trigger: GGGAATCCCGTTTCTGAGGCAGAGGAGTACAAGATG...TGGGATTACAGATATGTAGTGCCTGGCTCTGAGATTTTTAATTCTGAGAATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS GCA 90 bp | AAGTCCAGCTGCAGGGACAGGACATCTTTGAAGAGGATGCCCTCCTaGTTGGCTAGCTGCCCAGCTTCTTCCTGGGGCCCTTGCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KSSCRDRTSLKRMPS*LASCPASSWGPCSP Trigger: CGGGGAGCAAGGGCCCCAGGAAGAAGCTGGGCAGCTAGCCAAGCAGGAGGGCATCCTCTTCAAAGATGTCCTGTCCCTGCAGCTGGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS GCA 90 bp | AGGGACAGGACATCTTTGAAGAGGATGCCCTCCTGCTTGGCTAGCTaGCCAGCTTCTTCCTGGGGCCCTTGCTCCCCGACAGCTGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RDRTSLKRMPSCLAS*PASSWGPCSPTAAL Trigger: CAAAGCAGCTGTCGGGGAGCAAGGGCCCCAGGAAGAAGCTGGGCAGCTAGCCAAGCAGGAGGGCATCCTCTTCAAAGATGTCCTGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS GCA 90 bp | CAGGCAGGTAGGACAGCTTGTTGCCCTCCACATCCTCGGAATACATaGTGTCAAACAGGAAGGGGCCGTTCAGGTGCTCAACAAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QAGRTACCPPHPRNT*CQTGRGRSGAQQTP Trigger: TGGCGTTTGTTGAGCACCTGAACGGCCCCTTCCTGTTTGACAGCATGTATTCCGAGGATGTGGAGGGCAACAAGCTGTCCTACCTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS-3UTR CAA 90 bp | CTTCCAGAGGTCCTGAGTTCAATTCCAGCAACCACATGGTGGCTCACAACCATCTTCTTCCTGGGGCCCTaGCTCCCCGACAGCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPEVLSSIPATTWWLTTIFFLGP*LPDSCF Trigger: AAAGCAGCTGTCGGGGAGCAAGGGCCCCAGGAAGAA...GATGGTTGTGAGCCACCATGTGGTTGCTGGAATTGAACTCAGGACCTCTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR CAA 90 bp | ACCTGCTCTGAGACAGGACTGGGGTTAAAGGCAGTGCTTGTTTGCTTGGTTGGTTCACCTGGTGGGCTGTaGTGTAGAAGCAGCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TCSETGLGLKAVLVCLVGSPGGL*CRSSRG Trigger: GCCTCGGCTGCTTCTACACAACAGCCCACCAGGTGA...ACCAACCAAGCAAACAAGCACTGCCTTTAACCCCAGTCCTGTCTCAGAGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS TCA 90 bp | ATCTGCAGCTGTGCCTCGCGGTGCTTCAGCTCGTCAATGCTGTACTaGTGTTTCATCTTCGCCATCTCTCTCATCTGCTCATCAACGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ICSCASRCFSSSMLY*CFIFAISLICSSTR Trigger: GCGCGTTGATGAGCAGATGAGAGAGATGGCGAAGATGAAACATCAGTACAGCATTGACGAGCTGAAGCACCGCGAGGCACAGCTGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS-3UTR CAA 90 bp | GATGAAGTTAGAGTAACTGAGGATGTCCTGAATCTAGCTCAGGCTGCCTCAAACCTCAGGTCCTCCAGGTaGACCAGGGTATCCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DEVRVTEDVLNLAQAASNLRSSR*TRVSRP Trigger: GGGCCTGGATACCCTGGTCAACCTGGAGGACCTGAG...GTTTGAGGCAGCCTGAGCTAGATTCAGGACATCCTCAGTTACTCTAACTTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGAGATGACTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGATGTTGCTAATCTGGTaGTTGCCCAGTGACAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGEMTQRLRALTALPEVLMLLIW*LPSDST Trigger: GGTGCTGTCACTGGGCAACAACCAGATTAGCAACAT...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGTCATCTCTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS TCA 90 bp | CGCGCCGGAAGTCCAAGTACACGAGGTCAGAAAGATAGGCATAGATaGACATCTTGTACTCCTCTGCCTCAGAAACGGGATTCCCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RAGSPSTRGQKDRHR*TSCTPLPQKRDSQR Trigger: TCGCTGGGAATCCCGTTTCTGAGGCAGAGGAGTACAAGATGTTCATCTATGCCTATCTTTCTGACCTCGTGTACTTGGACTTCCGGCGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS GCA 90 bp | CCAGCTTCATCTGCAGCTGTGCCTCGCGGTGCTTCAGCTCGTCAATaGTGTACTGATGTTTCATCTTCGCCATCTCTCTCATCTGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PASSAAVPRGASARQ*CTDVSSSPSLSSAH Trigger: ATGAGCAGATGAGAGAGATGGCGAAGATGAAACATCAGTACAGCATTGACGAGCTGAAGCACCGCGAGGCACAGCTGCAGATGAAGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCCCAGCATGGGGATGAAAGACCAACTCCAAGATTAACTGTAACTGACCAGAGGGACAGGACATCTTaGAAGAGGATGCCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAQHGDERPTPRLTVTDQRDRTS*KRMPSC Trigger: GCAGGAGGGCATCCTCTTCAAAGATGTCCTGTCCCT...CTGGTCAGTTACAGTTAATCTTGGAGTTGGTCTTTCATCCCCATGCTGGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR CAA 90 bp | CTTCCAGAGGTCCTGAGTTCAATTCCAGCAACCACATGGTGGCTCACAACCATCTTGGAGATCCGGTTATaGGACAAGCTCAGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPEVLSSIPATTWWLTTILEIRL*DKLRSS Trigger: GGAGGACCTGAGCTTGTCCAATAACCGGATCTCCAA...GATGGTTGTGAGCCACCATGTGGTTGCTGGAATTGAACTCAGGACCTCTGGAAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS GCA 90 bp | ATATTCATCATGTTGCTAATCTGGTTGTTGCCCAGTGACAGCACCTaGAGCTTCACCAGGGCATCTAGAGAGTCCACCTTGGAGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: IFIMLLIWLLPSDST*SFTRASRESTLEIR Trigger: CCGGATCTCCAAGGTGGACTCTCTAGATGCCCTGGTGAAGCTGCAGGTGCTGTCACTGGGCAACAACCAGATTAGCAACATGATGAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS GCA 90 bp | CACGAGGTCAGAAAGATAGGCATAGATGAACATCTTGTACTCCTCTaGCTCAGAAACGGGATTCCCAGCGAGACTGAGTGTTCGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HEVRKIGIDEHLVLL*LRNGIPSETECSQA Trigger: TGCCTGCGAACACTCAGTCTCGCTGGGAATCCCGTTTCTGAGGCAGAGGAGTACAAGATGTTCATCTATGCCTATCTTTCTGACCTCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS TCA 90 bp | TGGCATTTAAGTTCAGCAAGTGCTTTTCCTCAAACTTGGCAACCTTaGGCTTGCCCTGGTCCTGGTTTTCCAGGATGGCCTCCTGTATGC | + |
|
Preference number: 5 (lower is better) Translates to: WHLSSASAFPQTWQP*ACPGPGFPGWPPVC Trigger: GCATACAGGAGGCCATCCTGGAAAACCAGGACCAGGGCAAGCTCAAGGTTGCCAAGTTTGAGGAAAAGCACTTGCTGAACTTAAATGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS-3UTR CAA 90 bp | AATTGCTTAACCTCTGGGGTTACTAATGGCAGCCACCTGGTGGGGATGCTTAAGTCCCCGACAGCTGCTTaGAGCATGTCATCATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: NCLTSGVTNGSHLVGMLKSPTAA*SMSSSI Trigger: AATGGATGATGACATGCTCAAAGCAGCTGTCGGGGA...CTTAAGCATCCCCACCAGGTGGCTGCCATTAGTAACCCCAGAGGTTAAGCAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR CAA 90 bp | TCTGTGAACAGCACTGAGACTGGACTTTGGAAACCAGCTTGTCCCTCAAGGCAGTCGATGGCCTCGATGTaGTTAAAGGACAAATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVNSTETGLWKPACPSRQSMASM*LKDKSS Trigger: GCTGGATTTGTCCTTTAACAACATCGAGGCCATCGA...CTGCCTTGAGGGACAAGCTGGTTTCCAAAGTCCAGTCTCAGTGCTGTTCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR CAA 90 bp | TTAACCTTCCATCCCTGGGGAATCCTCATCTTTCCCAAATTACAATTCTCGTTTCTCAGGTCCTCCAGGTaGACCAGGGTATCCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LTFHPWGILIFPKLQFSFLRSSR*TRVSRP Trigger: GGGCCTGGATACCCTGGTCAACCTGGAGGACCTGAG...AAACGAGAATTGTAATTTGGGAAAGATGAGGATTCCCCAGGGATGGAAGGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS TCA 90 bp | TGCCCTGGTCCTGGTTTTCCAGGATGGCCTCCTGTATGCACTCATTaGAAGTGTCTAACTCTACCTTCCGTTTTTCTTGCTGATTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CPGPGFPGWPPVCTH*KCLTLPSVFLADSG Trigger: GCCTGAATCAGCAAGAAAAACGGAAGGTAGAGTTAGACACTTTCAATGAGTGCATACAGGAGGCCATCCTGGAAAACCAGGACCAGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS CCA 90 bp | TTCAGCAAGTGCTTTTCCTCAAACTTGGCAACCTTGAGCTTGCCCTaGTCCTGGTTTTCCAGGATGGCCTCCTGTATGCACTCATTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FSKCFSSNLATLSLP*SWFSRMASCMHSLK Trigger: TTTCAATGAGTGCATACAGGAGGCCATCCTGGAAAACCAGGACCAGGGCAAGCTCAAGGTTGCCAAGTTTGAGGAAAAGCACTTGCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS-3UTR CAA 90 bp | ACTCAAGTTCATACTTTCACAGGAAAGCCCACTGTAGTCGGAGATGGGGAAGCATCCCCGACAGCTGCTTaGAGCATGTCATCATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: TQVHTFTGKPTVVGDGEASPTAA*SMSSSI Trigger: AATGGATGATGACATGCTCAAAGCAGCTGTCGGGGA...TGCTTCCCCATCTCCGACTACAGTGGGCTTTCCTGTGAAAGTATGAACTTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR CAA 90 bp | GAAAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCACAAATCTCTTCTTCCTGGGGCCCTaGCTCCCCGACAGCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EKVLWECVQENGCLFTNLFFLGP*LPDSCF Trigger: AAAGCAGCTGTCGGGGAGCAAGGGCCCCAGGAAGAA...GAGATTTGTGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS TCA 90 bp | CCACATTCCAGGTTGTCCAGTTCACTCTGCATGTGGTCGACGAATTaGTTGATCTCCTTCACTCGCTTACGGTTCCTCATGATCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PHSRLSSSLCMWSTN*LISFTRLRFLMISS Trigger: AGATGAGATCATGAGGAACCGTAAGCGAGTGAAGGAGATCAATCAATTCGTCGACCACATGCAGAGTGAACTGGACAACCTGGAATGTGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS-3UTR CAA 90 bp | CAAGGAAGAGGTGACAGAGTCAGGAAGAAATGGGTGCGCGCGTGCACACAAACAATGATATTCATCATGTaGCTAATCTGGTTGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QGRGDRVRKKWVRACTQTMIFIM*LIWLLP Trigger: GGGCAACAACCAGATTAGCAACATGATGAATATCAT...TGTTTGTGTGCACGCGCGCACCCATTTCTTCCTGACTCTGTCACCTCTTCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070805.13 |
||
| CDS-3UTR CAA 90 bp | TTAACCTTCCATCCCTGGGGAATCCTCATCTTTCCCAAATTACAATTCTCGTTTTTGGAGATCCGGTTATaGGACAAGCTCAGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTFHPWGILIFPKLQFSFLEIRL*DKLRSS Trigger: GGAGGACCTGAGCTTGTCCAATAACCGGATCTCCAA...AAACGAGAATTGTAATTTGGGAAAGATGAGGATTCCCCAGGGATGGAAGGTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCTTGGAAAAAGTCTTGTGGGAATGTGTTCAGGAGAATGGATGCCTTTTCATCGATGGCCTCGATGTaGTTAAAGGACAAATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPWKKSCGNVFRRMDAFSSMASM*LKDKSS Trigger: GCTGGATTTGTCCTTTAACAACATCGAGGCCATCGA...TGAAAAGGCATCCATTCTCCTGAACACATTCCCACAAGACTTTTTCCAAGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS-3UTR CAA 90 bp | ATCACACAATGTATTAACCTTCCATCCCTGGGGAATCCTCATCTTTCCCAAATTATGTTGCTAATCTGGTaGTTGCCCAGTGACAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ITQCINLPSLGNPHLSQIMLLIW*LPSDST Trigger: GGTGCTGTCACTGGGCAACAACCAGATTAGCAACAT...AATTTGGGAAAGATGAGGATTCCCCAGGGATGGAAGGTTAATACATTGTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS TCA 90 bp | TCTCATCTTTGTGAATCTTGTCTACTAGATGTGCACACCAAGAGTTaGTTCCAGTCACCAGCTCATCTTCTCGGTTGTCAATCTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SHLCESCLLDVHTKS*FQSPAHLLGCQSSG Trigger: TCCTGAAGATTGACAACCGAGAAGATGAGCTGGTGACTGGAATCAACTCTTGGTGTGCACATCTAGTAGACAAGATTCACAAAGATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS-3UTR CAA 90 bp | CAGGAGAATGGATGCCTTTTCACAAATCTCTCAGGTTCACAGTGCTTAAGCCAAATGATATTCATCATGTaGCTAATCTGGTTGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QENGCLFTNLSGSQCLSQMIFIM*LIWLLP Trigger: GGGCAACAACCAGATTAGCAACATGATGAATATCAT...TTGGCTTAAGCACTGTGAACCTGAGAGATTTGTGAAAAGGCATCCATTCTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094140.9 |
||
| CDS TCA 90 bp | ATGCACTCATTGAAAGTGTCTAACTCTACCTTCCGTTTTTCTTGCTaGTTCAGGCCATACTCAAAAATGTTCAGGCAGATGATGACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: MHSLKVSNSTFRFSC*FRPYSKMFRQMMTN Trigger: GTTTGTCATCATCTGCCTGAACATTTTTGAGTATGGCCTGAATCAGCAAGAAAAACGGAAGGTAGAGTTAGACACTTTCAATGAGTGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS TCA 72 bp | ACTCCTCTGCCTCAGAAACGGGATTCCCAGCGAGACTaGGTGTTCGCAGGCACGGGAACCGGCGCAGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: TPLPQKRDSQRD*VFAGTGTGAGR Trigger: TCTACCTGCGCCGGTTCCCGTGCCTGCGAACACTCAGTCTCGCTGGGAATCCCGTTTCTGAGGCAGAGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS GCA 72 bp | TGCTTGGCTAGCTGCCCAGCTTCTTCCTGGGGCCCTTaGTCCCCGACAGCTGCTTTGAGCATGTCATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: CLASCPASSWGP*SPTAALSMSSS Trigger: GGATGATGACATGCTCAAAGCAGCTGTCGGGGAGCAAGGGCCCCAGGAAGAAGCTGGGCAGCTAGCCAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS CAA 72 bp | GAGATCCGGTTATTGGACAAGCTCAGGTCCTCCAGGTaGACCAGGGTATCCAGGCCCTCGATGGCCTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: EIRLLDKLRSSR*TRVSRPSMASM Trigger: CATCGAGGCCATCGAGGGCCTGGATACCCTGGTCAACCTGGAGGACCTGAGCTTGTCCAATAACCGGATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS CAA 90 bp | AGCTTCACCAGGGCATCTAGAGAGTCCACCTTGGAGATCCGGTTATaGGACAAGCTCAGGTCCTCCAGGTTGACCAGGGTATCCAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SFTRASRESTLEIRL*DKLRSSRLTRVSRP Trigger: GGGCCTGGATACCCTGGTCAACCTGGAGGACCTGAGCTTGTCCAATAACCGGATCTCCAAGGTGGACTCTCTAGATGCCCTGGTGAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS CAA 90 bp | AGTGACAGCACCTGCAGCTTCACCAGGGCATCTAGAGAGTCCACCTaGGAGATCCGGTTATTGGACAAGCTCAGGTCCTCCAGGTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: SDSTCSFTRASREST*EIRLLDKLRSSRLT Trigger: GGTCAACCTGGAGGACCTGAGCTTGTCCAATAACCGGATCTCCAAGGTGGACTCTCTAGATGCCCTGGTGAAGCTGCAGGTGCTGTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS CAA 90 bp | TCCTCCAGGTTGACCAGGGTATCCAGGCCCTCGATGGCCTCGATGTaGTTAAAGGACAAATCCAGCCAGACGAGGTGTATGAGGTTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSRLTRVSRPSMASM*LKDKSSQTRCMRFV Trigger: GACGAACCTCATACACCTCGTCTGGCTGGATTTGTCCTTTAACAACATCGAGGCCATCGAGGGCCTGGATACCCTGGTCAACCTGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS CAA 90 bp | TCCACCTTGGAGATCCGGTTATTGGACAAGCTCAGGTCCTCCAGGTaGACCAGGGTATCCAGGCCCTCGATGGCCTCGATGTTGTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: STLEIRLLDKLRSSR*TRVSRPSMASMLLK Trigger: CTTTAACAACATCGAGGCCATCGAGGGCCTGGATACCCTGGTCAACCTGGAGGACCTGAGCTTGTCCAATAACCGGATCTCCAAGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS CAA 90 bp | TCCTCCAGCTGTTCCACCAGCTGCATCTCCAGGATCATGAGTGTGTaGAACAGCTCACCGATGCTCTCAGTGCACTCCGTCAGCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSCSTSCISRIMSV*NSSPMLSVHSVSFF Trigger: GAAGAAGCTGACGGAGTGCACTGAGAGCATCGGTGAGCTGTTCAACACACTCATGATCCTGGAGATGCAGCTGGTGGAACAGCTGGAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS GCA 72 bp | AGGACAGCTTGTTGCCCTCCACATCCTCGGAATACATaGTGTCAAACAGGAAGGGGCCGTTCAGGTGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RTACCPPHPRNT*CQTGRGRSGAQ Trigger: TTGAGCACCTGAACGGCCCCTTCCTGTTTGACAGCATGTATTCCGAGGATGTGGAGGGCAACAAGCTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS CAA 72 bp | AGGGCATCTAGAGAGTCCACCTTGGAGATCCGGTTATaGGACAAGCTCAGGTCCTCCAGGTTGACCAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RASRESTLEIRL*DKLRSSRLTRV Trigger: TACCCTGGTCAACCTGGAGGACCTGAGCTTGTCCAATAACCGGATCTCCAAGGTGGACTCTCTAGATGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS GCA 72 bp | GCTTCTTCAGGTTCTCAAACTGCCAGAGGTTATCGATaGGGAGGATGTTCTGGAAGTCCAGCTGCAGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: ASSGSQTARGYR*GGCSGSPAAGT Trigger: TGTCCCTGCAGCTGGACTTCCAGAACATCCTCCGCATCGATAACCTCTGGCAGTTTGAGAACCTGAAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
||
| CDS GCA 72 bp | ATGTTGCTAATCTGGTTGTTGCCCAGTGACAGCACCTaGAGCTTCACCAGGGCATCTAGAGAGTCCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: MLLIWLLPSDST*SFTRASRESTL Trigger: CAAGGTGGACTCTCTAGATGCCCTGGTGAAGCTGCAGGTGCTGTCACTGGGCAACAACCAGATTAGCAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS CCA 72 bp | TGCTTTTCCTCAAACTTGGCAACCTTGAGCTTGCCCTaGTCCTGGTTTTCCAGGATGGCCTCCTGTATGCAC | + |
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Preference number: 6 (lower is better) Translates to: CFSSNLATLSLP*SWFSRMASCMH Trigger: GTGCATACAGGAGGCCATCCTGGAAAACCAGGACCAGGGCAAGCTCAAGGTTGCCAAGTTTGAGGAAAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS CAA 72 bp | TTGACCAGGGTATCCAGGCCCTCGATGGCCTCGATGTaGTTAAAGGACAAATCCAGCCAGACGAGGTGTATG | + |
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Preference number: 6 (lower is better) Translates to: LTRVSRPSMASM*LKDKSSQTRCM Trigger: CATACACCTCGTCTGGCTGGATTTGTCCTTTAACAACATCGAGGCCATCGAGGGCCTGGATACCCTGGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS CAA 90 bp | TCTTCCCGGATGGCATTTAAGTTCAGCAAGTGCTTTTCCTCAAACTaGGCAACCTTGAGCTTGCCCTGGTCCTGGTTTTCCAGGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: SSRMAFKFSKCFSSN*ATLSLPWSWFSRMA Trigger: GGCCATCCTGGAAAACCAGGACCAGGGCAAGCTCAAGGTTGCCAAGTTTGAGGAAAAGCACTTGCTGAACTTAAATGCCATCCGGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS CAA 90 bp | AGGTGGATGTCATGTGATGCCCCAACGGCATTAACAATTGTGTCTTaGTCAACAAAAAGCGCCCGCACGTCATCGGGTAAGTCCTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: RWMSCDAPTALTIVS*STKSARTSSGKSSS Trigger: GGACGAGGACTTACCCGATGACGTGCGGGCGCTTTTTGTTGACAAAGACACAATTGTTAATGCCGTTGGGGCATCACATGACATCCACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS CAA 90 bp | TGTGCACACCAAGAGTTGATTCCAGTCACCAGCTCATCTTCTCGGTaGTCAATCTTCAGGAGGTGGATGTCATGTGATGCCCCAACGGCA | + |
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Preference number: 6 (lower is better) Translates to: CAHQELIPVTSSSSR*SIFRRWMSCDAPTA Trigger: TGCCGTTGGGGCATCACATGACATCCACCTCCTGAAGATTGACAACCGAGAAGATGAGCTGGTGACTGGAATCAACTCTTGGTGTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS TCA 72 bp | TGTGCCTCGCGGTGCTTCAGCTCGTCAATGCTGTACTaGTGTTTCATCTTCGCCATCTCTCTCATCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: CASRCFSSSMLY*CFIFAISLICS Trigger: TGAGCAGATGAGAGAGATGGCGAAGATGAAACATCAGTACAGCATTGACGAGCTGAAGCACCGCGAGGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS TCA 72 bp | AGTTCAGCAAGTGCTTTTCCTCAAACTTGGCAACCTTaGGCTTGCCCTGGTCCTGGTTTTCCAGGATGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSASAFPQTWQP*ACPGPGFPGWP Trigger: AGGCCATCCTGGAAAACCAGGACCAGGGCAAGCTCAAGGTTGCCAAGTTTGAGGAAAAGCACTTGCTGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS CAA 90 bp | TTTAAGTTCAGCAAGTGCTTTTCCTCAAACTTGGCAACCTTGAGCTaGCCCTGGTCCTGGTTTTCCAGGATGGCCTCCTGTATGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: FKFSKCFSSNLATLS*PWSWFSRMASCMHS Trigger: TGAGTGCATACAGGAGGCCATCCTGGAAAACCAGGACCAGGGCAAGCTCAAGGTTGCCAAGTTTGAGGAAAAGCACTTGCTGAACTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS CAA 90 bp | ATGGCATTTAAGTTCAGCAAGTGCTTTTCCTCAAACTTGGCAACCTaGAGCTTGCCCTGGTCCTGGTTTTCCAGGATGGCCTCCTGTATG | + |
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Preference number: 6 (lower is better) Translates to: MAFKFSKCFSSNLAT*SLPWSWFSRMASCM Trigger: CATACAGGAGGCCATCCTGGAAAACCAGGACCAGGGCAAGCTCAAGGTTGCCAAGTTTGAGGAAAAGCACTTGCTGAACTTAAATGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS TCA 72 bp | AGGTTGTCCAGTTCACTCTGCATGTGGTCGACGAATTaGTTGATCTCCTTCACTCGCTTACGGTTCCTCATG | + |
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Preference number: 6 (lower is better) Translates to: RLSSSLCMWSTN*LISFTRLRFLM Trigger: CATGAGGAACCGTAAGCGAGTGAAGGAGATCAATCAATTCGTCGACCACATGCAGAGTGAACTGGACAACCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS GCA 72 bp | TCAGTCTCTTCCCGGATGGCATTTAAGTTCAGCAAGTaGTTTTCCTCAAACTTGGCAACCTTGAGCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SVSSRMAFKFSK*FSSNLATLSLP Trigger: GGGCAAGCTCAAGGTTGCCAAGTTTGAGGAAAAGCACTTGCTGAACTTAAATGCCATCCGGGAAGAGACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS CAA 72 bp | TCATGTGATGCCCCAACGGCATTAACAATTGTGTCTTaGTCAACAAAAAGCGCCCGCACGTCATCGGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: SCDAPTALTIVS*STKSARTSSGK Trigger: CTTACCCGATGACGTGCGGGCGCTTTTTGTTGACAAAGACACAATTGTTAATGCCGTTGGGGCATCACATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS CAA 72 bp | CAAGAGTTGATTCCAGTCACCAGCTCATCTTCTCGGTaGTCAATCTTCAGGAGGTGGATGTCATGTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: QELIPVTSSSSR*SIFRRWMSCDA Trigger: GGCATCACATGACATCCACCTCCTGAAGATTGACAACCGAGAAGATGAGCTGGTGACTGGAATCAACTCTTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS CAA 72 bp | CAGGTTGTCCAGTTCACTCTGCATGTGGTCGACGAATaGATTGATCTCCTTCACTCGCTTACGGTTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: QVVQFTLHVVDE*IDLLHSLTVPH Trigger: ATGAGGAACCGTAAGCGAGTGAAGGAGATCAATCAATTCGTCGACCACATGCAGAGTGAACTGGACAACCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS CAA 90 bp | TCCACATTCCAGGTTGTCCAGTTCACTCTGCATGTGGTCGACGAATaGATTGATCTCCTTCACTCGCTTACGGTTCCTCATGATCTCATC | + |
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Preference number: 6 (lower is better) Translates to: STFQVVQFTLHVVDE*IDLLHSLTVPHDLI Trigger: GATGAGATCATGAGGAACCGTAAGCGAGTGAAGGAGATCAATCAATTCGTCGACCACATGCAGAGTGAACTGGACAACCTGGAATGTGGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS GCA 72 bp | AGAAAGATAGGCATAGATGAACATCTTGTACTCCTCTaGCTCAGAAACGGGATTCCCAGCGAGACTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: RKIGIDEHLVLL*LRNGIPSETEC Trigger: ACACTCAGTCTCGCTGGGAATCCCGTTTCTGAGGCAGAGGAGTACAAGATGTTCATCTATGCCTATCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS GCA 72 bp | AATATGTTTATGGTCTCCTCCAGCTGTTCCACCAGCTaGATCTCCAGGATCATGAGTGTGTTGAACAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: NMFMVSSSCSTS*ISRIMSVLNSS Trigger: TGAGCTGTTCAACACACTCATGATCCTGGAGATGCAGCTGGTGGAACAGCTGGAGGAGACCATAAACATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS CAA 72 bp | ATGGCATTTAAGTTCAGCAAGTGCTTTTCCTCAAACTaGGCAACCTTGAGCTTGCCCTGGTCCTGGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: MAFKFSKCFSSN*ATLSLPWSWFS Trigger: GGAAAACCAGGACCAGGGCAAGCTCAAGGTTGCCAAGTTTGAGGAAAAGCACTTGCTGAACTTAAATGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS TCA 72 bp | AGTCCAAGTACACGAGGTCAGAAAGATAGGCATAGATaGACATCTTGTACTCCTCTGCCTCAGAAACGGGAT | + |
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Preference number: 6 (lower is better) Translates to: SPSTRGQKDRHR*TSCTPLPQKRD Trigger: ATCCCGTTTCTGAGGCAGAGGAGTACAAGATGTTCATCTATGCCTATCTTTCTGACCTCGTGTACTTGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070805.13 ENSMUST00000094140.9 ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS TCA 72 bp | CCTGGTTTTCCAGGATGGCCTCCTGTATGCACTCATTaGAAGTGTCTAACTCTACCTTCCGTTTTTCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: PGFPGWPPVCTH*KCLTLPSVFLA Trigger: AGCAAGAAAAACGGAAGGTAGAGTTAGACACTTTCAATGAGTGCATACAGGAGGCCATCCTGGAAAACCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS TCA 72 bp | TGTGAATCTTGTCTACTAGATGTGCACACCAAGAGTTaGTTCCAGTCACCAGCTCATCTTCTCGGTTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: CESCLLDVHTKS*FQSPAHLLGCQ Trigger: TTGACAACCGAGAAGATGAGCTGGTGACTGGAATCAACTCTTGGTGTGCACATCTAGTAGACAAGATTCACA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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| CDS TCA 72 bp | TTCACTCGCTTACGGTTCCTCATGATCTCATCTTTGTaGATCTTGTCTACTAGATGTGCACACCAAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: FTRLRFLMISSL*ILSTRCAHQEL Trigger: CAACTCTTGGTGTGCACATCTAGTAGACAAGATTCACAAAGATGAGATCATGAGGAACCGTAAGCGAGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108722.5 ENSMUST00000108723.9 |
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