Pregenerated sensors for DRAXIN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029005Ensembl transcript IDs: ENSMUST00000030862.5
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCTCAGTCCTCCACCAGGACCCCCTTTTACACACACACAAACCTaGTCCTGCATAGCCACAAGCTCTTCCAGCCCTGCCTCAGCCGGG | + |
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Preference number: 1 (lower is better) Translates to: LLSPPPGPPFTHTQT*SCIATSSSSPASAG Trigger: CCCGGCTGAGGCAGGGCTGGAAGAGCTTGTGGCTATGCAGGATCAGGTTTGTGTGTGTGTAAAAGGGGGTCCTGGTGGAGGACTGAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR TCA 90 bp | GGAGGAGCCTGGAGAGGACCCGAGGAGGCTTGGAGAAGGACTCAATaGAGCTCCTTAGCAGGAGAAGGGGTGAGGTCTTGGAACTCGACC | + |
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Preference number: 1 (lower is better) Translates to: GGAWRGPEEAWRRTQ*SSLAGEGVRSWNST Trigger: GGTCGAGTTCCAAGACCTCACCCCTTCTCCTGCTAAGGAGCTTCATTGAGTCCTTCTCCAAGCCTCCTCGGGTCCTCTCCAGGCTCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | AAACGACTGTCCCCGGCCCCCAGCATCTGTCCTCCATCTGTATCCTaGACCTGTGACACCCAACCCATCACACCCAAGAGCAACCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: KRLSPAPSICPPSVS*TCDTQPITPKSNLE Trigger: CTCCAGGTTGCTCTTGGGTGTGATGGGTTGGGTGTCACAGGTCCAGGATACAGATGGAGGACAGATGCTGGGGGCCGGGGACAGTCGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR TCA 90 bp | AGGAGGGGGAAACGGAATGGGAGCAAGCCCAGGGCCTCGCGCAGGTaGGGCAAACAGCTTACTTTGTTTTGCTTGAGATGCAGTCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: RRGKRNGSKPRASRR*GKQLTLFCLRCSLL Trigger: CAGCAGACTGCATCTCAAGCAAAACAAAGTAAGCTGTTTGCCTCACCTGCGCGAGGCCCTGGGCTTGCTCCCATTCCGTTTCCCCCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR TCA 90 bp | GGTCAGCAAAGTGAGTTGGAAGAACAGGCTCTTTACTGCAGCAGGTaGGAAGACAGGGGACCAAGGCAGCTCCCTGGGGGAGCTTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: GQQSELEEQALYCSR*EDRGPRQLPGGALE Trigger: CTCCAAAGCTCCCCCAGGGAGCTGCCTTGGTCCCCTGTCTTCTCACCTGCTGCAGTAAAGAGCCTGTTCTTCCAACTCACTTTGCTGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | TTCTCGATCTGCCAGCTTTCCTTGGAGCCTGACCCTGGACCAGACTaGTTATCCCAAAGCAGTAAACAGCCCTGGCATCCCACGGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: FSICQLSLEPDPGPD*LSQSSKQPWHPTGE Trigger: CTCACCCGTGGGATGCCAGGGCTGTTTACTGCTTTGGGATAACCAGTCTGGTCCAGGGTCAGGCTCCAAGGAAAGCTGGCAGATCGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | CGCGCACCTCAGGTGCGGGTCAGTGGTCTCTTACCACGGTCTCTGTaGAAATTCAGTAAAAATACATGTGGCGCTTGGCGTTTGCCTGCG | + |
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Preference number: 1 (lower is better) Translates to: RAPQVRVSGLLPRSL*KFSKNTCGAWRLPA Trigger: CGCAGGCAAACGCCAAGCGCCACATGTATTTTTACTGAATTTCCACAGAGACCGTGGTAAGAGACCACTGACCCGCACCTGAGGTGCGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | TCTTTACTGCAGCAGGTGAGAAGACAGGGGACCAAGGCAGCTCCCTaGGGGAGCTTTGGAGACTTTGAAGCCCAGACCAAGTTAGCACGT | + |
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Preference number: 1 (lower is better) Translates to: SLLQQVRRQGTKAAP*GSFGDFEAQTKLAR Trigger: ACGTGCTAACTTGGTCTGGGCTTCAAAGTCTCCAAAGCTCCCCCAGGGAGCTGCCTTGGTCCCCTGTCTTCTCACCTGCTGCAGTAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | ATTGAACATGGGTCCCCTGGGAGAGCATTCAGTGTTCCTAACCACTaGGCCCCACTTGTGTCCTCTAAGCAGAGCCAACAGCCCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: IEHGSPGRAFSVPNH*APLVSSKQSQQPRR Trigger: CCTTCTGGGCTGTTGGCTCTGCTTAGAGGACACAAGTGGGGCCCAGTGGTTAGGAACACTGAATGCTCTCCCAGGGGACCCATGTTCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | CACTTGTGTCCTCTAAGCAGAGCCAACAGCCCAGAAGGCAGGCTCTaGGTGTTAAGTTTGCCCTTGCTGATAGTTGCCAGGAAGCAGACC | + |
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Preference number: 1 (lower is better) Translates to: HLCPLSRANSPEGRL*VLSLPLLIVARKQT Trigger: GGTCTGCTTCCTGGCAACTATCAGCAAGGGCAAACTTAACACCCAGAGCCTGCCTTCTGGGCTGTTGGCTCTGCTTAGAGGACACAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR TCA 90 bp | CCAGGGCCTCGCGCAGGTGAGGCAAACAGCTTACTTTGTTTTGCTTaGGATGCAGTCTGCTGTGGTCTGGCCTCACACTCACTAATCAGA | + |
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Preference number: 1 (lower is better) Translates to: PGPRAGEANSLLCFA*DAVCCGLASHSLIR Trigger: TCTGATTAGTGAGTGTGAGGCCAGACCACAGCAGACTGCATCTCAAGCAAAACAAAGTAAGCTGTTTGCCTCACCTGCGCGAGGCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR GCA 90 bp | CCCATCACACCCAAGAGCAACCTGGAGATTGTATTAGAAGCCAGATaGTGGGAGTGGGGAAGGGGACACCCTTGTGACTGTGCTTCAGTA | + |
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Preference number: 1 (lower is better) Translates to: PITPKSNLEIVLEAR*WEWGRGHPCDCASV Trigger: TACTGAAGCACAGTCACAAGGGTGTCCCCTTCCCCACTCCCAGCATCTGGCTTCTAATACAATCTCCAGGTTGCTCTTGGGTGTGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR GCA 90 bp | GGAGAAACCAGAGAAAGAGAAAGCATCCTGAACTGTGCCTGGAGATaGACACCTTTAATCCCAGGACAGGAAAGGCAGAGGCAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GETRERESILNCAWR*TPLIPGQERQRQRQ Trigger: CTGCCTCTGCCTCTGCCTTTCCTGTCCTGGGATTAAAGGTGTGCATCTCCAGGCACAGTTCAGGATGCTTTCTCTTTCTCTGGTTTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | TCCCTGCAGTATAAACACCTTGTTCTGTACGCAGCCGGCTTAACCTaGCCTCCCATTTTCTGTGTCTTCACAACTGCCGTGGCCTACAGT | + |
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Preference number: 1 (lower is better) Translates to: SLQYKHLVLYAAGLT*PPIFCVFTTAVAYS Trigger: ACTGTAGGCCACGGCAGTTGTGAAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGCTGCGTACAGAACAAGGTGTTTATACTGCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | ATCACACCCAAGAGCAACCTGGAGATTGTATTAGAAGCCAGATGCTaGGAGTGGGGAAGGGGACACCCTTGTGACTGTGCTTCAGTAGGT | + |
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Preference number: 1 (lower is better) Translates to: ITPKSNLEIVLEARC*EWGRGHPCDCASVG Trigger: ACCTACTGAAGCACAGTCACAAGGGTGTCCCCTTCCCCACTCCCAGCATCTGGCTTCTAATACAATCTCCAGGTTGCTCTTGGGTGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | TGCTGTGGTCTGGCCTCACACTCACTAATCAGAAGAAGTCCAGCCTaGGCAGGATTCATGCATTCCAGGCAAGCATGTTACAAACGTAGC | + |
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Preference number: 1 (lower is better) Translates to: CCGLASHSLIRRSPA*AGFMHSRQACYKRS Trigger: GCTACGTTTGTAACATGCTTGCCTGGAATGCATGAATCCTGCCCAGGCTGGACTTCTTCTGATTAGTGAGTGTGAGGCCAGACCACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | TCCAGCCCTGCCTCAGCCGGGAATCCAAATGTGTCCCCAGCAAAGTaGCTTTGCTCTGTGCCGTACACTTTGGTTTTTGTTGTTGTTAGT | + |
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Preference number: 1 (lower is better) Translates to: SSPASAGNPNVSPAK*LCSVPYTLVFVVVS Trigger: ACTAACAACAACAAAAACCAAAGTGTACGGCACAGAGCAAAGCCACTTTGCTGGGGACACATTTGGATTCCCGGCTGAGGCAGGGCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR GCA 90 bp | GGTCTCTGTGGAAATTCAGTAAAAATACATGTGGCGCTTGGCGTTTaGCTGCGACATAGCATTCCAGATCCAGGACTGTCAGTTGTCCCC | + |
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Preference number: 1 (lower is better) Translates to: GLCGNSVKIHVALGV*LRHSIPDPGLSVVP Trigger: GGGGACAACTGACAGTCCTGGATCTGGAATGCTATGTCGCAGGCAAACGCCAAGCGCCACATGTATTTTTACTGAATTTCCACAGAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | GGGACAGAGACCTTAAGTAACTTCCCTAAGGTCAGCAAAGTGAGTTaGAAGAACAGGCTCTTTACTGCAGCAGGTGAGAAGACAGGGGAC | + |
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Preference number: 1 (lower is better) Translates to: GTETLSNFPKVSKVS*KNRLFTAAGEKTGD Trigger: GTCCCCTGTCTTCTCACCTGCTGCAGTAAAGAGCCTGTTCTTCCAACTCACTTTGCTGACCTTAGGGAAGTTACTTAAGGTCTCTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | CACTTTGGAGAAACCAGAGAAAGAGAAAGCATCCTGAACTGTGCCTaGAGATGCACACCTTTAATCCCAGGACAGGAAAGGCAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: HFGETRERESILNCA*RCTPLIPGQERQRQ Trigger: CTGCCTCTGCCTTTCCTGTCCTGGGATTAAAGGTGTGCATCTCCAGGCACAGTTCAGGATGCTTTCTCTTTCTCTGGTTTCTCCAAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | AGATTCACCTACCTCTGCCACCCGAGTGCTGGGATTAATGCACTTTaGAGAAACCAGAGAAAGAGAAAGCATCCTGAACTGTGCCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: RFTYLCHPSAGINAL*RNQRKRKHPELCLE Trigger: CTCCAGGCACAGTTCAGGATGCTTTCTCTTTCTCTGGTTTCTCCAAAGTGCATTAATCCCAGCACTCGGGTGGCAGAGGTAGGTGAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR GCA 90 bp | CCCAGCTTGGAAAGAAGAACAAGCATATTTGATTTCTTCTCGATCTaGCAGCTTTCCTTGGAGCCTGACCCTGGACCAGACTGGTTATCC | + |
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Preference number: 1 (lower is better) Translates to: PSLERRTSIFDFFSI*QLSLEPDPGPDWLS Trigger: GGATAACCAGTCTGGTCCAGGGTCAGGCTCCAAGGAAAGCTGGCAGATCGAGAAGAAATCAAATATGCTTGTTCTTCTTTCCAAGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | ACCCCTTTGCATCATCAGACAAAACCCAGACAAATAGTCCCTGTCTaGGGACAATGGAGATCTGTCAGAGTGTTCTTGAGGCATCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: TPLHHQTKPRQIVPV*GQWRSVRVFLRHQL Trigger: GAGCTGATGCCTCAAGAACACTCTGACAGATCTCCATTGTCCCCAGACAGGGACTATTTGTCTGGGTTTTGTCTGATGATGCAAAGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | AGGCTTGGCCATGGATCTGTCCCATGTCTGCTCTTCCTTGAGATTTaGAAACCTCATTCCCTGCAGTATAAACACCTTGTTCTGTACGCA | + |
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Preference number: 1 (lower is better) Translates to: RLGHGSVPCLLFLEI*KPHSLQYKHLVLYA Trigger: TGCGTACAGAACAAGGTGTTTATACTGCAGGGAATGAGGTTTCCAAATCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CCA 90 bp | GAAGAACAAGCATATTTGATTTCTTCTCGATCTGCCAGCTTTCCTTaGAGCCTGACCCTGGACCAGACTGGTTATCCCAAAGCAGTAAAC | + |
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Preference number: 1 (lower is better) Translates to: EEQAYLISSRSASFP*SLTLDQTGYPKAVN Trigger: GTTTACTGCTTTGGGATAACCAGTCTGGTCCAGGGTCAGGCTCCAAGGAAAGCTGGCAGATCGAGAAGAAATCAAATATGCTTGTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 90 bp | CGGGCGGGCTCTGGCGCACTGCTCTCTGCTAAACCGCTCTCCAGCTaGTGGTTGAGTGTACTGGGCGTACACCTGCTGCCTCAGCCATTG | + |
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Preference number: 2 (lower is better) Translates to: RAGSGALLSAKPLSS*WLSVLGVHLLPQPL Trigger: CAATGGCTGAGGCAGCAGGTGTACGCCCAGTACACTCAACCACAAGCTGGAGAGCGGTTTAGCAGAGAGCAGTGCGCCAGAGCCCGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 90 bp | GGCTCTGGCGCACTGCTCTCTGCTAAACCGCTCTCCAGCTTGTGGTaGAGTGTACTGGGCGTACACCTGCTGCCTCAGCCATTGGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: GSGALLSAKPLSSLW*SVLGVHLLPQPLVP Trigger: GGGAACCAATGGCTGAGGCAGCAGGTGTACGCCCAGTACACTCAACCACAAGCTGGAGAGCGGTTTAGCAGAGAGCAGTGCGCCAGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 90 bp | GGTCCCCTGGGAGAGCATTCAGTGTTCCTAACCACTGGGCCCCACTaGTGTCCTCTAAGCAGAGCCAACAGCCCAGAAGGCAGGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GPLGEHSVFLTTGPH*CPLSRANSPEGRLW Trigger: CCAGAGCCTGCCTTCTGGGCTGTTGGCTCTGCTTAGAGGACACAAGTGGGGCCCAGTGGTTAGGAACACTGAATGCTCTCCCAGGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGGGAGGAGGGGGAAACGGAATGGGAGCAAGCCCAGGGCCTCGCGCAGGTAGAAGAAGTCCAGCCTaGGCAGGATTCATGCATTCC | + |
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Preference number: 2 (lower is better) Translates to: EVGGGGNGMGASPGPRAGRRSPA*AGFMHS Trigger: GGAATGCATGAATCCTGCCCAGGCTGGACTTCTTCT...ACCTGCGCGAGGCCCTGGGCTTGCTCCCATTCCGTTTCCCCCTCCTCCCACTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCTTAACCTGGCCTCCCATTTTCTGTGTCTTCACAACTGCCGTGGCCTACGAGGGGGAAACGGAATaGGAGCAAGCCCAGGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: AGLTWPPIFCVFTTAVAYEGETE*EQAQGL Trigger: GAGGCCCTGGGCTTGCTCCCATTCCGTTTCCCCCTC...GTAGGCCACGGCAGTTGTGAAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR TCA 90 bp | GCCGGCTTAACCTGGCCTCCCATTTTCTGTGTCTTCACAACTGCCGTGGCCTACCAGCAGAGCAGAGACTaGGGACCACTGAGGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: AGLTWPPIFCVFTTAVAYQQSRD*GPLRRE Trigger: CTCCCTCCTCAGTGGTCCTCAGTCTCTGCTCTGCTG...GTAGGCCACGGCAGTTGTGAAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR TCA 90 bp | GCCGGCTTAACCTGGCCTCCCATTTTCTGTGTCTTCACAACTGCCGTGGCCTACTTCCCACCTTGGCCTTaGTCCTTCCGACTCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: AGLTWPPIFCVFTTAVAYFPPWP*SFRLLA Trigger: GGCCAGGAGTCGGAAGGATCAAGGCCAAGGTGGGAA...GTAGGCCACGGCAGTTGTGAAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 90 bp | ACTGTAGGCAGTGGTAGGAGGAGCCTGGAGAGGACCCGAGGAGGCTaGGAGAAGGACTCAATGAAGCTCCTTAGCAGGAGAAGGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: TVGSGRRSLERTRGG*EKDSMKLLSRRRGE Trigger: CTCACCCCTTCTCCTGCTAAGGAGCTTCATTGAGTCCTTCTCCAAGCCTCCTCGGGTCCTCTCCAGGCTCCTCCTACCACTGCCTACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR TCA 90 bp | AACCACTGGGCCCCACTTGTGTCCTCTAAGCAGAGCCAACAGCCCAGAAGGCAGCTTTACTGCAGCAGGTaGGAAGACAGGGGACCAAGG | + |
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Preference number: 2 (lower is better) Translates to: NHWAPLVSSKQSQQPRRQLYCSR*EDRGPR Trigger: CCTTGGTCCCCTGTCTTCTCACCTGCTGCAGTAAAG...CTGCCTTCTGGGCTGTTGGCTCTGCTTAGAGGACACAAGTGGGGCCCAGTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTGAACTGTCCAAACGACTGTCCCCGGCCCCCAGCATCTGTCCTCCATCTCGCTTGGCGTTTGCCTaGGACATAGCATTCCAGATC | + |
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Preference number: 2 (lower is better) Translates to: SAELSKRLSPAPSICPPSRLAFA*DIAFQI Trigger: GATCTGGAATGCTATGTCGCAGGCAAACGCCAAGCG...AGATGGAGGACAGATGCTGGGGGCCGGGGACAGTCGTTTGGACAGTTCAGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 90 bp | AGCTTGTGGTTGAGTGTACTGGGCGTACACCTGCTGCCTCAGCCATaGGTTCCCTACTCAGCCCAAGCTGAGCTAGTTACTAACACGGTC | + |
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Preference number: 2 (lower is better) Translates to: SLWLSVLGVHLLPQP*VPYSAQAELVTNTV Trigger: GACCGTGTTAGTAACTAGCTCAGCTTGGGCTGAGTAGGGAACCAATGGCTGAGGCAGCAGGTGTACGCCCAGTACACTCAACCACAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 90 bp | CTAAGCAGAGCCAACAGCCCAGAAGGCAGGCTCTGGGTGTTAAGTTaGCCCTTGCTGATAGTTGCCAGGAAGCAGACCTCAGAGTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LSRANSPEGRLWVLS*PLLIVARKQTSELP Trigger: TGGCAACTCTGAGGTCTGCTTCCTGGCAACTATCAGCAAGGGCAAACTTAACACCCAGAGCCTGCCTTCTGGGCTGTTGGCTCTGCTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR GCA 90 bp | GCCGGCTTAACCTGGCCTCCCATTTTCTGTGTCTTCACAACTGCCGTGGCCTACGAGGATTGTCTGAGTTaGCAGCTTGGCCAAAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: AGLTWPPIFCVFTTAVAYEDCLS*QLGQRV Trigger: CACTCTTTGGCCAAGCTGGCAACTCAGACAATCCTC...GTAGGCCACGGCAGTTGTGAAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR CCA 90 bp | AGTGCTGAACTGTCCAAACGACTGTCCCCGGCCCCCAGCATCTGTCCTCCATCTGACCCTGGACCAGACTaGTTATCCCAAAGCAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: SAELSKRLSPAPSICPPSDPGPD*LSQSSK Trigger: TTTACTGCTTTGGGATAACCAGTCTGGTCCAGGGTC...AGATGGAGGACAGATGCTGGGGGCCGGGGACAGTCGTTTGGACAGTTCAGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR CCA 90 bp | AGTGCTGAACTGTCCAAACGACTGTCCCCGGCCCCCAGCATCTGTCCTCCATCTCAAATAGTCCCTGTCTaGGGACAATGGAGATCTGTC | + |
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Preference number: 2 (lower is better) Translates to: SAELSKRLSPAPSICPPSQIVPV*GQWRSV Trigger: GACAGATCTCCATTGTCCCCAGACAGGGACTATTTG...AGATGGAGGACAGATGCTGGGGGCCGGGGACAGTCGTTTGGACAGTTCAGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR GCA 90 bp | AGCATATTTGATTTCTTCTCGATCTGCCAGCTTTCCTTGGAGCCTGACCCTGGACGGGCTCTGGCGCACTaGTCTCTGCTAAACCGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SIFDFFSICQLSLEPDPGRALAH*SLLNRS Trigger: AGAGCGGTTTAGCAGAGAGCAGTGCGCCAGAGCCCG...TCCAGGGTCAGGCTCCAAGGAAAGCTGGCAGATCGAGAAGAAATCAAATATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 90 bp | GAGAAGGACTCAATGAAGCTCCTTAGCAGGAGAAGGGGTGAGGTCTaGGAACTCGACCTCCTCAAAGGGCAGGCAAAGCTGTCATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: EKDSMKLLSRRRGEV*ELDLLKGQAKLSFS Trigger: GGAAAATGACAGCTTTGCCTGCCCTTTGAGGAGGTCGAGTTCCAAGACCTCACCCCTTCTCCTGCTAAGGAGCTTCATTGAGTCCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR GCA 90 bp | ACACCTTGTTCTGTACGCAGCCGGCTTAACCTGGCCTCCCATTTTCTGTGTCTTAGATTCACCTACCTCTaGCACCCGAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: TPCSVRSRLNLASHFLCLRFTYL*HPSAGI Trigger: AATCCCAGCACTCGGGTGGCAGAGGTAGGTGAATCT...AAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGCTGCGTACAGAACAAGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR GCA 90 bp | GCAACAAGAGGAGGCTTGGCCATGGATCTGTCCCATGTCTGCTCTTCCTTGAGACCAGCAAAGTGGCTTTaGTCTGTGCCGTACACTTTG | + |
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Preference number: 2 (lower is better) Translates to: ATRGGLAMDLSHVCSSLRPAKWL*SVPYTL Trigger: CAAAGTGTACGGCACAGAGCAAAGCCACTTTGCTGG...TCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCCTCCTCTTGTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGTGAGGTCTTGGAACTCGACCTCCTCAAAGGGCAGGCAAAGCTGTCATTTTTCTGAGTTGCCAGCTTaGCCAAAGAGTGAGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: GVRSWNSTSSKGRQSCHFSELPA*PKSETQ Trigger: CTGAGTCTCACTCTTTGGCCAAGCTGGCAACTCAGA...AAAATGACAGCTTTGCCTGCCCTTTGAGGAGGTCGAGTTCCAAGACCTCACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR-3UTR CCA 90 bp | AACCACTGGGCCCCACTTGTGTCCTCTAAGCAGAGCCAACAGCCCAGAAGGCAGGTCAGCAAAGTGAGTTaGAAGAACAGGCTCTTTACT | + |
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Preference number: 2 (lower is better) Translates to: NHWAPLVSSKQSQQPRRQVSKVS*KNRLFT Trigger: AGTAAAGAGCCTGTTCTTCCAACTCACTTTGCTGAC...CTGCCTTCTGGGCTGTTGGCTCTGCTTAGAGGACACAAGTGGGGCCCAGTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 90 bp | TTGGCGTTTGCCTGCGACATAGCATTCCAGATCCAGGACTGTCAGTaGTCCCCTCTCTTTCCAACCCTTTTCAGTCAAGGAAGCCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LAFACDIAFQIQDCQ*SPLFPTLFSQGSLL Trigger: CAAGAGGCTTCCTTGACTGAAAAGGGTTGGAAAGAGAGGGGACAACTGACAGTCCTGGATCTGGAATGCTATGTCGCAGGCAAACGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CAA 90 bp | GGAGGCTCTGTGATTCTACCAGATGACTTGGCAACAAGAGGAGGCTaGGCCATGGATCTGTCCCATGTCTGCTCTTCCTTGAGATTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GGSVILPDDLATRGG*AMDLSHVCSSLRFG Trigger: TCCAAATCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCCTCCTCTTGTTGCCAAGTCATCTGGTAGAATCACAGAGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCTATCAGACCCAGCTTGGAAAGAAGAACAAGCATATTTGATTTCTTCTCGCCACTGAGGAGGGAGTaGCGTGGCGTCTCAGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: RPIRPSLERRTSIFDFFSPLRRE*RGVSGL Trigger: CAGTCCTGAGACGCCACGTCACTCCCTCCTCAGTGG...CGAGAAGAAATCAAATATGCTTGTTCTTCTTTCCAAGCTGGGTCTGATAGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR TCA 90 bp | CTGATGCTCCCACGTTCCAAGGTGGAAGAGCTACAGCCCTCCAAGGAATTATTCGTCAGGGATGGAGGGTaGGAGTCATTACACAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: LMLPRSKVEELQPSKELFVRDGG*ESLHSM Trigger: CATACTGTGTAATGACTCTCACCCTCCATCCCTGAC...GAATAATTCCTTGGAGGGCTGTAGCTCTTCCACCTTGGAACGTGGGAGCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR TCA 90 bp | GCAACAAGAGGAGGCTTGGCCATGGATCTGTCCCATGTCTGCTCTTCCTTGAGACTAAGGTCAGCAAAGTaGGTTGGAAGAACAGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ATRGGLAMDLSHVCSSLRLRSAK*VGRTGS Trigger: AGAGCCTGTTCTTCCAACTCACTTTGCTGACCTTAG...TCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCCTCCTCTTGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR TCA 90 bp | GCAACAAGAGGAGGCTTGGCCATGGATCTGTCCCATGTCTGCTCTTCCTTGAGAAAAGAGAAAGCATCCTaGACTGTGCCTGGAGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: ATRGGLAMDLSHVCSSLRKEKAS*TVPGDA Trigger: TGCATCTCCAGGCACAGTTCAGGATGCTTTCTCTTT...TCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCCTCCTCTTGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTCCCACGTTCCAAGGTGGAAGAGCTACAGCCCTCCAAGGAATTATTCAAGGTGTGTGCATGCCTTTaGAGCAGAGCAGAGACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: MLPRSKVEELQPSKELFKVCACL*SRAETE Trigger: CTCAGTCTCTGCTCTGCTGCAAAGGCATGCACACAC...CTTGAATAATTCCTTGGAGGGCTGTAGCTCTTCCACCTTGGAACGTGGGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR GCA 90 bp | GACTCCACTTTTCTGGCACCCAGGACTCCTGGTTCCTTAGTTTCTAAACATGGTAACCTCTCCTCATCCTaGTCAGTCCTCCACCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: DSTFLAPRTPGSLVSKHGNLSSS*SVLHQD Trigger: GTCCTGGTGGAGGACTGAGCAGGATGAGGAGAGGTT...ACCATGTTTAGAAACTAAGGAACCAGGAGTCCTGGGTGCCAGAAAAGTGGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGACAGAGACCTTAAGTAACTTCCCTAAGGTCAGCAAAGTGAGTTGGAAGAACGGGGAGGGCTTGTCCTaGGAAGGCTTTTGTCCTTCG | + |
|
Preference number: 2 (lower is better) Translates to: GTETLSNFPKVSKVSWKNGEGLS*EGFCPS Trigger: CGAAGGACAAAAGCCTTCCCAGGACAAGCCCTCCCC...GTTCTTCCAACTCACTTTGCTGACCTTAGGGAAGTTACTTAAGGTCTCTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR TCA 90 bp | GGGGTGAGGTCTTGGAACTCGACCTCCTCAAAGGGCAGGCAAAGCTGTCATTTTAGCTTGGCCAAAGAGTaGGACTCAGTCCATCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: GVRSWNSTSSKGRQSCHFSLAKE*DSVHQK Trigger: TTTTTGATGGACTGAGTCTCACTCTTTGGCCAAGCT...AAAATGACAGCTTTGCCTGCCCTTTGAGGAGGTCGAGTTCCAAGACCTCACCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR TCA 90 bp | AGCTTGGAAAGAAGAACAAGCATATTTGATTTCTTCTCGATCTGCCAGCTTTCCGAGACTGAGGACCACTaGGGAGGGAGTGACGTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: SLERRTSIFDFFSICQLSETEDH*GGSDVA Trigger: CGCCACGTCACTCCCTCCTCAGTGGTCCTCAGTCTC...GGAAAGCTGGCAGATCGAGAAGAAATCAAATATGCTTGTTCTTCTTTCCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR GCA 90 bp | ACACCTTGTTCTGTACGCAGCCGGCTTAACCTGGCCTCCCATTTTCTGTGTCTTGATTTCTTCTCGATCTaGCAGCTTTCCTTGGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: TPCSVRSRLNLASHFLCLDFFSI*QLSLEP Trigger: AGGCTCCAAGGAAAGCTGGCAGATCGAGAAGAAATC...AAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGCTGCGTACAGAACAAGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR TCA 90 bp | GGGGTGAGGTCTTGGAACTCGACCTCCTCAAAGGGCAGGCAAAGCTGTCATTTTGGATTATTCTTCACTTaGAAACAGGTGCCCTGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: GVRSWNSTSSKGRQSCHFGLFFT*KQVPCV Trigger: TACACAGGGCACCTGTTTTCAAGTGAAGAATAATCC...AAAATGACAGCTTTGCCTGCCCTTTGAGGAGGTCGAGTTCCAAGACCTCACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCTAACCACTGGGCCCCACTTGTGTCCTCTAAGCAGAGCCAACAGCCCAGAAAGAACAAGCATATTTaGTTTCTTCTCGATCTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: VPNHWAPLVSSKQSQQPRKNKHI*FLLDLP Trigger: TGGCAGATCGAGAAGAAATCAAATATGCTTGTTCTT...TCTGGGCTGTTGGCTCTGCTTAGAGGACACAAGTGGGGCCCAGTGGTTAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGAGGAGGCTTGGCCATGGATCTGTCCCATGTCTGCTCTTCCTTGAGATTTTTGACGTTTGTTAGCTaGCACTCTAGGTGTGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: TRGGLAMDLSHVCSSLRFLTFVS*HSRCVC Trigger: GCACACACACCTAGAGTGCCAGCTAACAAACGTCAA...AAATCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCCTCCTCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CCA 90 bp | ACACCTTGTTCTGTACGCAGCCGGCTTAACCTGGCCTCCCATTTTCTGTGTCTTATCCTGAACTGTGCCTaGAGATGCACACCTTTAATC | + |
|
Preference number: 2 (lower is better) Translates to: TPCSVRSRLNLASHFLCLILNCA*RCTPLI Trigger: GATTAAAGGTGTGCATCTCCAGGCACAGTTCAGGAT...AAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGCTGCGTACAGAACAAGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGAGGAGGCTTGGCCATGGATCTGTCCCATGTCTGCTCTTCCTTGAGATTTGGTAAGAACCAGACATaGAAAGTCAAGGGACAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: TRGGLAMDLSHVCSSLRFGKNQT*KVKGQR Trigger: TCTCTGTCCCTTGACTTTTCATGTCTGGTTCTTACC...AAATCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCCTCCTCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGAGGAGGCTTGGCCATGGATCTGTCCCATGTCTGCTCTTCCTTGAGATTTTTTTCCTTTGAAGTTTaGGTCTCAGGTCACAGGACC | + |
|
Preference number: 2 (lower is better) Translates to: TRGGLAMDLSHVCSSLRFFSFEV*VSGHRT Trigger: GGTCCTGTGACCTGAGACTCAAACTTCAAAGGAAAA...AAATCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCCTCCTCTTGT 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR GCA 90 bp | GACTCCACTTTTCTGGCACCCAGGACTCCTGGTTCCTTAGTTTCTAAACATGGTAAGCATCCTGAACTGTaGCTGGAGATGCACACCTTT | + |
|
Preference number: 2 (lower is better) Translates to: DSTFLAPRTPGSLVSKHGKHPEL*LEMHTF Trigger: AAAGGTGTGCATCTCCAGGCACAGTTCAGGATGCTT...ACCATGTTTAGAAACTAAGGAACCAGGAGTCCTGGGTGCCAGAAAAGTGGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CCA 90 bp | GACTCCACTTTTCTGGCACCCAGGACTCCTGGTTCCTTAGTTTCTAAACATGGTTATGATGGATCACTGTaGAAGAAAAGGCCCGTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: DSTFLAPRTPGSLVSKHGYDGSL*KKRPVD Trigger: GTCAACGGGCCTTTTCTTCCACAGTGATCCATCATA...ACCATGTTTAGAAACTAAGGAACCAGGAGTCCTGGGTGCCAGAAAAGTGGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CAA 90 bp | AGAAGAACAAGCATATTTGATTTCTTCTCGATCTGCCAGCTTTCCTaGGAGCCTGACCCTGGACCAGACTGGTTATCCCAAAGCAGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: RRTSIFDFFSICQLS*EPDPGPDWLSQSSK Trigger: TTTACTGCTTTGGGATAACCAGTCTGGTCCAGGGTCAGGCTCCAAGGAAAGCTGGCAGATCGAGAAGAAATCAAATATGCTTGTTCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTGAGGTCTTGGAACTCGACCTCCTCAAAGGGCAGGCAAAGCTGTCATTTTTTACCACGGTCTCTGTaGAAATTCAGTAAAAATACA | + |
|
Preference number: 2 (lower is better) Translates to: GVRSWNSTSSKGRQSCHFLPRSL*KFSKNT Trigger: TGTATTTTTACTGAATTTCCACAGAGACCGTGGTAA...AAAATGACAGCTTTGCCTGCCCTTTGAGGAGGTCGAGTTCCAAGACCTCACCCC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCTATCAGACCCAGCTTGGAAAGAAGAACAAGCATATTTGATTTCTTCTCGCTCTTGGGAAAAGCCTaGGAACAGGTCAAGTCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: RPIRPSLERRTSIFDFFSLLGKA*EQVKSS Trigger: ACTAGACTTGACCTGTTCTCAGGCTTTTCCCAAGAG...CGAGAAGAAATCAAATATGCTTGTTCTTCTTTCCAAGCTGGGTCTGATAGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCTATCAGACCCAGCTTGGAAAGAAGAACAAGCATATTTGATTTCTTCTCGTTGAAACTGCTGCAATaGTGGTGTCGAGCAGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: RPIRPSLERRTSIFDFFSLKLLQ*WCRAEE Trigger: CTCTTCTGCTCGACACCAGCATTGCAGCAGTTTCAA...CGAGAAGAAATCAAATATGCTTGTTCTTCTTTCCAAGCTGGGTCTGATAGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGAGGAGGCTTGGCCATGGATCTGTCCCATGTCTGCTCTTCCTTGAGATTTCTGTGCCGTACACTTTaGTTTTTGTTGTTGTTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TRGGLAMDLSHVCSSLRFLCRTL*FLLLLV Trigger: AACTAACAACAACAAAAACCAAAGTGTACGGCACAG...AAATCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCCTCCTCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR TCA 90 bp | GACTCCACTTTTCTGGCACCCAGGACTCCTGGTTCCTTAGTTTCTAAACATGGTAAATCACTAGCTATATaGTGGATCACTGTGGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: DSTFLAPRTPGSLVSKHGKSLAI*WITVEE Trigger: TTCTTCCACAGTGATCCATCATATAGCTAGTGATTT...ACCATGTTTAGAAACTAAGGAACCAGGAGTCCTGGGTGCCAGAAAAGTGGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTGGAAAGAAGAACAAGCATATTTGATTTCTTCTCGATCTGCCAGCTTTCCATGGAGTGTCAGGGATaGAGGGTGAGAGTCATTACA | + |
|
Preference number: 2 (lower is better) Translates to: SLERRTSIFDFFSICQLSMECQG*RVRVIT Trigger: TGTAATGACTCTCACCCTCCATCCCTGACACTCCAT...GGAAAGCTGGCAGATCGAGAAGAAATCAAATATGCTTGTTCTTCTTTCCAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | AAGCCACCGCCGAGTCGAGCAGAATCAGGGAGCAGGTaGGGGTCCCACCCCGGACTGCGGGCGGGCGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KPPPSRAESGSR*GSHPGLRAGGL Trigger: GAGCCCGCCCGCCCGCAGTCCGGGGTGGGACCCCCACCTGCTCCCTGATTCTGCTCGACTCGGCGGTGGCTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | CAGCAGGTGAGAAGACAGGGGACCAAGGCAGCTCCCTaGGGGAGCTTTGGAGACTTTGAAGCCCAGACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QQVRRQGTKAAP*GSFGDFEAQTK Trigger: CTTGGTCTGGGCTTCAAAGTCTCCAAAGCTCCCCCAGGGAGCTGCCTTGGTCCCCTGTCTTCTCACCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | GGGTCCCCTGGGAGAGCATTCAGTGTTCCTAACCACTaGGCCCCACTTGTGTCCTCTAAGCAGAGCCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: GSPGRAFSVPNH*APLVSSKQSQQ Trigger: CTGTTGGCTCTGCTTAGAGGACACAAGTGGGGCCCAGTGGTTAGGAACACTGAATGCTCTCCCAGGGGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTGGGAGGAGGGGGAAACGGAATGGGAGCAAGCCCAGGGCCTCGCGCAGGTACAGCTTACTTTGTTTaGCTTGAGATGCAGTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: EVGGGGNGMGASPGPRAGTAYFV*LEMQSA Trigger: AGCAGACTGCATCTCAAGCAAAACAAAGTAAGCTGT...ACCTGCGCGAGGCCCTGGGCTTGCTCCCATTCCGTTTCCCCCTCCTCCCACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCTAACCACTGGGCCCCACTTGTGTCCTCTAAGCAGAGCCAACAGCCCAGAAAGCAGACCTCAGAGTaGCCAAGCCACAGCGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: VPNHWAPLVSSKQSQQPRKQTSE*PSHSEC Trigger: GCATTCGCTGTGGCTTGGCAACTCTGAGGTCTGCTT...TCTGGGCTGTTGGCTCTGCTTAGAGGACACAAGTGGGGCCCAGTGGTTAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR TCA 72 bp | AGTGAGTTGGAAGAACAGGCTCTTTACTGCAGCAGGTaGGAAGACAGGGGACCAAGGCAGCTCCCTGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SELEEQALYCSR*EDRGPRQLPGG Trigger: TCCCCCAGGGAGCTGCCTTGGTCCCCTGTCTTCTCACCTGCTGCAGTAAAGAGCCTGTTCTTCCAACTCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR TCA 72 bp | TGGAGAGGACCCGAGGAGGCTTGGAGAAGGACTCAATaGAGCTCCTTAGCAGGAGAAGGGGTGAGGTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: WRGPEEAWRRTQ*SSLAGEGVRSW Trigger: CCAAGACCTCACCCCTTCTCCTGCTAAGGAGCTTCATTGAGTCCTTCTCCAAGCCTCCTCGGGTCCTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR TCA 72 bp | CCCCAGCATCTGTCCTCCATCTGTATCCTGGACCTGTaGCACCCAACCCATCACACCCAAGAGCAACCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PQHLSSICILDL*HPTHHTQEQPG Trigger: TCCAGGTTGCTCTTGGGTGTGATGGGTTGGGTGTCACAGGTCCAGGATACAGATGGAGGACAGATGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | CAACTGCCGTGGCCTACAGTAATCACATACTCCCTGTaGCCTGTGAGCATGAAGGCTGTCATGGAGGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QLPWPTVITYSL*PVSMKAVMEGQ Trigger: CTGGCCCTCCATGACAGCCTTCATGCTCACAGGCCACAGGGAGTATGTGATTACTGTAGGCCACGGCAGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR GCA 72 bp | AACCTGATCCTGCATAGCCACAAGCTCTTCCAGCCCTaGCTCAGCCGGGAATCCAAATGTGTCCCCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NLILHSHKLFQP*LSRESKCVPSK Trigger: TTTGCTGGGGACACATTTGGATTCCCGGCTGAGGCAGGGCTGGAAGAGCTTGTGGCTATGCAGGATCAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | CAGGGATGGAGGGTGAGAGTCATTACACAGTATGTCTaGCGAGCATGTGGGGACGTGTGTGCATGCCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QGWRVRVITQYV*RACGDVCACLC Trigger: GCAAAGGCATGCACACACGTCCCCACATGCTCGCCAGACATACTGTGTAATGACTCTCACCCTCCATCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | CCTCTAAGCAGAGCCAACAGCCCAGAAGGCAGGCTCTaGGTGTTAAGTTTGCCCTTGCTGATAGTTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLSRANSPEGRL*VLSLPLLIVAR Trigger: CCTGGCAACTATCAGCAAGGGCAAACTTAACACCCAGAGCCTGCCTTCTGGGCTGTTGGCTCTGCTTAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | GCAACAAGAGGAGGCTTGGCCATGGATCTGTCCCATGTCTGCTCTTCCTTGAGACTCTCCAGCTTGTGGTaGAGTGTACTGGGCGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: ATRGGLAMDLSHVCSSLRLSSLW*SVLGVH Trigger: GTGTACGCCCAGTACACTCAACCACAAGCTGGAGAG...TCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCCTCCTCTTGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTGAGGTCTTGGAACTCGACCTCCTCAAAGGGCAGGCAAAGCTGTCATTTTAAACCGCTCTCCAGCTaGTGGTTGAGTGTACTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GVRSWNSTSSKGRQSCHFKPLSS*WLSVLG Trigger: GCCCAGTACACTCAACCACAAGCTGGAGAGCGGTTT...AAAATGACAGCTTTGCCTGCCCTTTGAGGAGGTCGAGTTCCAAGACCTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | ACACCTTGTTCTGTACGCAGCCGGCTTAACCTGGCCTCCCATTTTCTGTGTCTTATCTGCCAGCTTTCCTaGGAGCCTGACCCTGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: TPCSVRSRLNLASHFLCLICQLS*EPDPGP Trigger: TGGTCCAGGGTCAGGCTCCAAGGAAAGCTGGCAGAT...AAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGCTGCGTACAGAACAAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | ACACCTTGTTCTGTACGCAGCCGGCTTAACCTGGCCTCCCATTTTCTGTGTCTTTTTCCCACCTTGGCCTaGATCCTTCCGACTCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TPCSVRSRLNLASHFLCLFPTLA*ILPTPG Trigger: GCCAGGAGTCGGAAGGATCAAGGCCAAGGTGGGAAA...AAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGCTGCGTACAGAACAAGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR TCA 72 bp | AAACGGAATGGGAGCAAGCCCAGGGCCTCGCGCAGGTaGGGCAAACAGCTTACTTTGTTTTGCTTGAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: KRNGSKPRASRR*GKQLTLFCLRC Trigger: GCATCTCAAGCAAAACAAAGTAAGCTGTTTGCCTCACCTGCGCGAGGCCCTGGGCTTGCTCCCATTCCGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | GGAGGGAGTGACGTGGCGTCTCAGGACTGGATGATCTaGGCTATGGATAAGCATAGGAGCAGAGCAACGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GGSDVASQDWMI*AMDKHRSRATL Trigger: TAACGTTGCTCTGCTCCTATGCTTATCCATAGCCCAGATCATCCAGTCCTGAGACGCCACGTCACTCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | CCTGGCCTCCCATTTTCTGTGTCTTCACAACTGCCGTaGCCTACAGTAATCACATACTCCCTGTGGCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PGLPFSVSSQLP*PTVITYSLWPV Trigger: CACAGGCCACAGGGAGTATGTGATTACTGTAGGCCACGGCAGTTGTGAAGACACAGAAAATGGGAGGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | ACACCTTGTTCTGTACGCAGCCGGCTTAACCTGGCCTCCCATTTTCTGTGTCTTAGGACCCGAGGAGGCTaGGAGAAGGACTCAATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TPCSVRSRLNLASHFLCLRTRGG*EKDSMK Trigger: CTTCATTGAGTCCTTCTCCAAGCCTCCTCGGGTCCT...AAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGCTGCGTACAGAACAAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | GCCTCTTGTTTTCGCCAATTGAAACTGCTGCAATGCTaGTGTCGAGCAGAAGAGGGTGCGCTACACAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ASCFRQLKLLQC*CRAEEGALHKA Trigger: GGCTTTGTGTAGCGCACCCTCTTCTGCTCGACACCAGCATTGCAGCAGTTTCAATTGGCGAAAACAAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCTGAACTGTCCAAACGACTGTCCCCGGCCCCCAGCATCTGTCCTCCATCTAGTCAAGGAAGCCTCTaGTTTTCGCCAATTGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: SAELSKRLSPAPSICPPSSQGSL*FSPIET Trigger: AGTTTCAATTGGCGAAAACAAGAGGCTTCCTTGACT...AGATGGAGGACAGATGCTGGGGGCCGGGGACAGTCGTTTGGACAGTTCAGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | GCCGGCTTAACCTGGCCTCCCATTTTCTGTGTCTTCACAACTGCCGTGGCCTACGGGATTATTCTTCACTaGAAAACAGGTGCCCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: AGLTWPPIFCVFTTAVAYGIILH*KTGALC Trigger: ACACAGGGCACCTGTTTTCAAGTGAAGAATAATCCC...GTAGGCCACGGCAGTTGTGAAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTCCCACGTTCCAAGGTGGAAGAGCTACAGCCCTCCAAGGAATTATTCAAGGCAACAAGAGGAGGCTaGGCCATGGATCTGTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: MLPRSKVEELQPSKELFKATRGG*AMDLSH Trigger: ATGGGACAGATCCATGGCCAAGCCTCCTCTTGTTGC...CTTGAATAATTCCTTGGAGGGCTGTAGCTCTTCCACCTTGGAACGTGGGAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | GCAACAAGAGGAGGCTTGGCCATGGATCTGTCCCATGTCTGCTCTTCCTTGAGAGGTCAGCAAAGTGAGTaGGAAGAACAGGCTCTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: ATRGGLAMDLSHVCSSLRGQQSE*EEQALY Trigger: GTAAAGAGCCTGTTCTTCCAACTCACTTTGCTGACC...TCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCCTCCTCTTGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR TCA 72 bp | CATGCAAGGACCCAGCCATGGGGATTATTCTTCACTTaGAAACAGGTGCCCTGTGTAGGAGCTGAGGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HARTQPWGLFFT*KQVPCVGAEGK Trigger: CTTTCCCTCAGCTCCTACACAGGGCACCTGTTTTCAAGTGAAGAATAATCCCCATGGCTGGGTCCTTGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR GCA 72 bp | GCATTTGGAAGACTGAGGCAGGAGGATTGTCTGAGTTaGCAGCTTGGCCAAAGAGTGAGACTCAGTCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: AFGRLRQEDCLS*QLGQRVRLSPS Trigger: TGATGGACTGAGTCTCACTCTTTGGCCAAGCTGGCAACTCAGACAATCCTCCTGCCTCAGTCTTCCAAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | CAGGTGCGGGTCAGTGGTCTCTTACCACGGTCTCTGTaGAAATTCAGTAAAAATACATGTGGCGCTTGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: QVRVSGLLPRSL*KFSKNTCGAWR Trigger: ACGCCAAGCGCCACATGTATTTTTACTGAATTTCCACAGAGACCGTGGTAAGAGACCACTGACCCGCACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | CTGGCCTCACACTCACTAATCAGAAGAAGTCCAGCCTaGGCAGGATTCATGCATTCCAGGCAAGCATGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LASHSLIRRSPA*AGFMHSRQACY Trigger: GTAACATGCTTGCCTGGAATGCATGAATCCTGCCCAGGCTGGACTTCTTCTGATTAGTGAGTGTGAGGCCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | GCCTCAGCCGGGAATCCAAATGTGTCCCCAGCAAAGTaGCTTTGCTCTGTGCCGTACACTTTGGTTTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ASAGNPNVSPAK*LCSVPYTLVFV Trigger: AACAAAAACCAAAGTGTACGGCACAGAGCAAAGCCACTTTGCTGGGGACACATTTGGATTCCCGGCTGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | AACCTGGAGATTGTATTAGAAGCCAGATGCTGGGAGTaGGGAAGGGGACACCCTTGTGACTGTGCTTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: NLEIVLEARCWE*GRGHPCDCASV Trigger: TACTGAAGCACAGTCACAAGGGTGTCCCCTTCCCCACTCCCAGCATCTGGCTTCTAATACAATCTCCAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | GACTCCACTTTTCTGGCACCCAGGACTCCTGGTTCCTTAGTTTCTAAACATGGTATCCAGGACTGTCAGTaGTCCCCTCTCTTTCCAACC | + |
|
Preference number: 3 (lower is better) Translates to: DSTFLAPRTPGSLVSKHGIQDCQ*SPLFPT Trigger: GGTTGGAAAGAGAGGGGACAACTGACAGTCCTGGAT...ACCATGTTTAGAAACTAAGGAACCAGGAGTCCTGGGTGCCAGAAAAGTGGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTGAGGTCTTGGAACTCGACCTCCTCAAAGGGCAGGCAAAGCTGTCATTTTCCTATCAGACCCAGCTaGGAAAGAAGAACAAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: GVRSWNSTSSKGRQSCHFPIRPS*ERRTSI Trigger: TATGCTTGTTCTTCTTTCCAAGCTGGGTCTGATAGG...AAAATGACAGCTTTGCCTGCCCTTTGAGGAGGTCGAGTTCCAAGACCTCACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGATGCTCCCACGTTCCAAGGTGGAAGAGCTACAGCCCTCCAAGGAATTATTCGTGAGAACAACCCCTTaGCATCATCAGACAAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: LMLPRSKVEELQPSKELFVRTTP*HHQTKP Trigger: GGGTTTTGTCTGATGATGCAAAGGGGTTGTTCTCAC...GAATAATTCCTTGGAGGGCTGTAGCTCTTCCACCTTGGAACGTGGGAGCATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTCCCACGTTCCAAGGTGGAAGAGCTACAGCCCTCCAAGGAATTATTCAAGTGCAGTATAAACACCTaGTTCTGTACGCAGCCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: MLPRSKVEELQPSKELFKCSINT*FCTQPA Trigger: AGCCGGCTGCGTACAGAACAAGGTGTTTATACTGCA...CTTGAATAATTCCTTGGAGGGCTGTAGCTCTTCCACCTTGGAACGTGGGAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR GCA 72 bp | GAAGCCTCTTGTTTTCGCCAATTGAAACTGCTGCAATaGTGGTGTCGAGCAGAAGAGGGTGCGCTACACAAA | + |
|
Preference number: 3 (lower is better) Translates to: EASCFRQLKLLQ*WCRAEEGALHK Trigger: TTTGTGTAGCGCACCCTCTTCTGCTCGACACCAGCATTGCAGCAGTTTCAATTGGCGAAAACAAGAGGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR GCA 72 bp | AGAGAAAGAGAAAGCATCCTGAACTGTGCCTGGAGATaGACACCTTTAATCCCAGGACAGGAAAGGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RERESILNCAWR*TPLIPGQERQR Trigger: CCTCTGCCTTTCCTGTCCTGGGATTAAAGGTGTGCATCTCCAGGCACAGTTCAGGATGCTTTCTCTTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | TATAAACACCTTGTTCTGTACGCAGCCGGCTTAACCTaGCCTCCCATTTTCTGTGTCTTCACAACTGCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: YKHLVLYAAGLT*PPIFCVFTTAV Trigger: CACGGCAGTTGTGAAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGCTGCGTACAGAACAAGGTGTTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR GCA 72 bp | TGGAGAAACCAGAGAAAGAGAAAGCATCCTGAACTGTaGCTGGAGATGCACACCTTTAATCCCAGGACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: WRNQRKRKHPEL*LEMHTFNPRTG Trigger: TCCTGTCCTGGGATTAAAGGTGTGCATCTCCAGGCACAGTTCAGGATGCTTTCTCTTTCTCTGGTTTCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR GCA 72 bp | GCCGGGAATCCAAATGTGTCCCCAGCAAAGTGGCTTTaGTCTGTGCCGTACACTTTGGTTTTTGTTGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: AGNPNVSPAKWL*SVPYTLVFVVV Trigger: AACAACAACAAAAACCAAAGTGTACGGCACAGAGCAAAGCCACTTTGCTGGGGACACATTTGGATTCCCGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR GCA 72 bp | GTCTGCTCTTCCTTGAGATTTGGAAACCTCATTCCCTaGAGTATAAACACCTTGTTCTGTACGCAGCCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VCSSLRFGNLIP*SINTLFCTQPA Trigger: AGCCGGCTGCGTACAGAACAAGGTGTTTATACTGCAGGGAATGAGGTTTCCAAATCTCAAGGAAGAGCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTATaGGCCAGACACTGTACTAAACACCTGGTAAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVCVCVL*ARHCTKHLVRT Trigger: GGTTCTTACCAGGTGTTTAGTACAGTGTCTGGCCCATAACACACACACACACACACACACACACACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | GAAACCAGAGAAAGAGAAAGCATCCTGAACTGTGCCTaGAGATGCACACCTTTAATCCCAGGACAGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ETRERESILNCA*RCTPLIPGQER Trigger: CCTTTCCTGTCCTGGGATTAAAGGTGTGCATCTCCAGGCACAGTTCAGGATGCTTTCTCTTTCTCTGGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | ACACCTTGTTCTGTACGCAGCCGGCTTAACCTGGCCTCCCATTTTCTGTGTCTTTCTGTGCCGTACACTTaGGTTTTTGTTGTTGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: TPCSVRSRLNLASHFLCLSVPYT*VFVVVS Trigger: ACTAACAACAACAAAAACCAAAGTGTACGGCACAGA...AAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGCTGCGTACAGAACAAGGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR GCA 72 bp | GGAAATTCAGTAAAAATACATGTGGCGCTTGGCGTTTaGCTGCGACATAGCATTCCAGATCCAGGACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GNSVKIHVALGV*LRHSIPDPGLS Trigger: TGACAGTCCTGGATCTGGAATGCTATGTCGCAGGCAAACGCCAAGCGCCACATGTATTTTTACTGAATTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR GCA 72 bp | GAAAGAAGAACAAGCATATTTGATTTCTTCTCGATCTaGCAGCTTTCCTTGGAGCCTGACCCTGGACCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ERRTSIFDFFSI*QLSLEPDPGPD Trigger: GTCTGGTCCAGGGTCAGGCTCCAAGGAAAGCTGGCAGATCGAGAAGAAATCAAATATGCTTGTTCTTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | CAGCTTACTTTGTTTTGCTTGAGATGCAGTCTGCTGTaGTCTGGCCTCACACTCACTAATCAGAAGAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QLTLFCLRCSLL*SGLTLTNQKKS Trigger: GGACTTCTTCTGATTAGTGAGTGTGAGGCCAGACCACAGCAGACTGCATCTCAAGCAAAACAAAGTAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | CATCATCAGACAAAACCCAGACAAATAGTCCCTGTCTaGGGACAATGGAGATCTGTCAGAGTGTTCTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HHQTKPRQIVPV*GQWRSVRVFLR Trigger: CCTCAAGAACACTCTGACAGATCTCCATTGTCCCCAGACAGGGACTATTTGTCTGGGTTTTGTCTGATGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CCA 72 bp | ACCTTAAGTAACTTCCCTAAGGTCAGCAAAGTGAGTTaGAAGAACAGGCTCTTTACTGCAGCAGGTGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TLSNFPKVSKVS*KNRLFTAAGEK Trigger: CTTCTCACCTGCTGCAGTAAAGAGCCTGTTCTTCCAACTCACTTTGCTGACCTTAGGGAAGTTACTTAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR GCA 72 bp | TTTCTTGCAGGTTATGTAGATGGTCTTATTGGTACCTaGAGATGTAGACTAGGGAAAGTTGAAGGGAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FLAGYVDGLIGT*RCRLGKVEGRL Trigger: GAGCCTCCCTTCAACTTTCCCTAGTCTACATCTGCAGGTACCAATAAGACCATCTACATAACCTGCAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | ACGTTACTGTTTCTCCTATTCATGATGATGATTAGCACCTGTCACATGCAAGGATCTTGTTTTCGCCAATaGAAACTGCTGCAATGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TLLFLLFMMMISTCHMQGSCFRQ*KLLQCW Trigger: CCAGCATTGCAGCAGTTTCAATTGGCGAAAACAAGA...TCCTTGCATGTGACAGGTGCTAATCATCATCATGAATAGGAGAAACAGTAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR-3UTR CAA 90 bp | ACGTTACTGTTTCTCCTATTCATGATGATGATTAGCACCTGTCACATGCAAGGACTTACTTTGTTTTGCTaGAGATGCAGTCTGCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TLLFLLFMMMISTCHMQGLTLFC*RCSLLW Trigger: CCACAGCAGACTGCATCTCAAGCAAAACAAAGTAAG...TCCTTGCATGTGACAGGTGCTAATCATCATCATGAATAGGAGAAACAGTAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| CDS-3UTR TCA 90 bp | AACCACTGGGCCCCACTTGTGTCCTCTAAGCAGAGCCAACAGCCCAGAAGGCAGGCCCCTTCCTCCGAGTaGCCCTGCGGTTCCGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NHWAPLVSSKQSQQPRRQAPSSE*PCGSGG Trigger: TCCACCGGAACCGCAGGGTCACTCGGAGGAAGGGGC...CTGCCTTCTGGGCTGTTGGCTCTGCTTAGAGGACACAAGTGGGGCCCAGTGGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGAACTGTCCAAACGACTGTCCCCGGCCCCCAGCATCTGTCCTCCATCTGCAGAGCTGGGGAGGTaGGAGTGGGTCTCCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAELSKRLSPAPSICPPSAELGR*EWVSGR Trigger: CCTGCCGGAGACCCACTCCCACCTCCCCAGCTCTGC...AGATGGAGGACAGATGCTGGGGGCCGGGGACAGTCGTTTGGACAGTTCAGCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| CDS-3UTR CCA 90 bp | AACCACTGGGCCCCACTTGTGTCCTCTAAGCAGAGCCAACAGCCCAGAAGGCAGCCGGCTAGGCCTTCCTaGGCCCCTGTCTTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NHWAPLVSSKQSQQPRRQPARPS*APVFLP Trigger: GGGAAGAAAGACAGGGGCCCAGGAAGGCCTAGCCGG...CTGCCTTCTGGGCTGTTGGCTCTGCTTAGAGGACACAAGTGGGGCCCAGTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| CDS-3UTR TCA 90 bp | AACCACTGGGCCCCACTTGTGTCCTCTAAGCAGAGCCAACAGCCCAGAAGGCAGGGCAAGCAATCCTGGTaGTGGTCACACGGATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NHWAPLVSSKQSQQPRRQGKQSW*WSHGSP Trigger: GGGGGATCCGTGTGACCATCACCAGGATTGCTTGCC...CTGCCTTCTGGGCTGTTGGCTCTGCTTAGAGGACACAAGTGGGGCCCAGTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| CDS-3UTR GCA 90 bp | GTTCCTAACCACTGGGCCCCACTTGTGTCCTCTAAGCAGAGCCAACAGCCCAGACTGGGACACCCACAGTaGAGAGCTGGGGAGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPNHWAPLVSSKQSQQPRLGHPQ*RAGEVG Trigger: TCCCACCTCCCCAGCTCTGCACTGTGGGTGTCCCAG...TCTGGGCTGTTGGCTCTGCTTAGAGGACACAAGTGGGGCCCAGTGGTTAGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| CDS-3UTR CCA 90 bp | CTGATGCTCCCACGTTCCAAGGTGGAAGAGCTACAGCCCTCCAAGGAATTATTCCTGGGGAGGTGGGAGTaGGTCTCCGGCAGGTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LMLPRSKVEELQPSKELFLGRWE*VSGRFR Trigger: CCGGAACCTGCCGGAGACCCACTCCCACCTCCCCAG...GAATAATTCCTTGGAGGGCTGTAGCTCTTCCACCTTGGAACGTGGGAGCATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGAACTGTCCAAACGACTGTCCCCGGCCCCCAGCATCTGTCCTCCATCTCGAAACATTTGTTGTTaGGGCCGCGGTTGTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SAELSKRLSPAPSICPPSRNICC*GRGCGV Trigger: CACCCCACAACCGCGGCCTCAACAACAAATGTTTCG...AGATGGAGGACAGATGCTGGGGGCCGGGGACAGTCGTTTGGACAGTTCAGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| CDS-3UTR CCA 90 bp | GTTCCTAACCACTGGGCCCCACTTGTGTCCTCTAAGCAGAGCCAACAGCCCAGATTGAGGCCGCGGTTGTaGGGTGTGCAGAGATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPNHWAPLVSSKQSQQPRLRPRL*GVQRCS Trigger: GGAACATCTCTGCACACCCCACAACCGCGGCCTCAA...TCTGGGCTGTTGGCTCTGCTTAGAGGACACAAGTGGGGCCCAGTGGTTAGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CAA 72 bp | TCTGGCGCACTGCTCTCTGCTAAACCGCTCTCCAGCTaGTGGTTGAGTGTACTGGGCGTACACCTGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGALLSAKPLSS*WLSVLGVHLLP Trigger: AGGCAGCAGGTGTACGCCCAGTACACTCAACCACAAGCTGGAGAGCGGTTTAGCAGAGAGCAGTGCGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| CDS-3UTR GCA 90 bp | GCAACAAGAGGAGGCTTGGCCATGGATCTGTCCCATGTCTGCTCTTCCTTGAGAGGCAGAGGATCCAGATaGAAGGGTGCCTGCCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ATRGGLAMDLSHVCSSLRGRGSR*KGACRV Trigger: CACACGGCAGGCACCCTTGCATCTGGATCCTCTGCC...TCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCCTCCTCTTGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CAA 72 bp | AGTGGTAGGAGGAGCCTGGAGAGGACCCGAGGAGGCTaGGAGAAGGACTCAATGAAGCTCCTTAGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGRRSLERTRGG*EKDSMKLLSRR Trigger: TCTCCTGCTAAGGAGCTTCATTGAGTCCTTCTCCAAGCCTCCTCGGGTCCTCTCCAGGCTCCTCCTACCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CAA 72 bp | GGAGAGCATTCAGTGTTCCTAACCACTGGGCCCCACTaGTGTCCTCTAAGCAGAGCCAACAGCCCAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GEHSVFLTTGPH*CPLSRANSPEG Trigger: GCCTTCTGGGCTGTTGGCTCTGCTTAGAGGACACAAGTGGGGCCCAGTGGTTAGGAACACTGAATGCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| CDS-3UTR TCA 90 bp | CTGATGCTCCCACGTTCCAAGGTGGAAGAGCTACAGCCCTCCAAGGAATTATTCGTTCCACCTTCTTCATaGGGGAGCTGGGGCCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: LMLPRSKVEELQPSKELFVPPSS*GSWGHG Trigger: TCCGTGGCCCCAGCTCCCTCATGAAGAAGGTGGAAC...GAATAATTCCTTGGAGGGCTGTAGCTCTTCCACCTTGGAACGTGGGAGCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CAA 72 bp | TTGAGTGTACTGGGCGTACACCTGCTGCCTCAGCCATaGGTTCCCTACTCAGCCCAAGCTGAGCTAGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: LSVLGVHLLPQP*VPYSAQAELVT Trigger: AGTAACTAGCTCAGCTTGGGCTGAGTAGGGAACCAATGGCTGAGGCAGCAGGTGTACGCCCAGTACACTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CAA 72 bp | TCAATGAAGCTCCTTAGCAGGAGAAGGGGTGAGGTCTaGGAACTCGACCTCCTCAAAGGGCAGGCAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SMKLLSRRRGEV*ELDLLKGQAKL Trigger: CAGCTTTGCCTGCCCTTTGAGGAGGTCGAGTTCCAAGACCTCACCCCTTCTCCTGCTAAGGAGCTTCATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| 3UTR CAA 72 bp | AGCCCAGAAGGCAGGCTCTGGGTGTTAAGTTTGCCCTaGCTGATAGTTGCCAGGAAGCAGACCTCAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPEGRLWVLSLP*LIVARKQTSEL Trigger: CAACTCTGAGGTCTGCTTCCTGGCAACTATCAGCAAGGGCAAACTTAACACCCAGAGCCTGCCTTCTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAGGTCTTGGAACTCGACCTCCTCAAAGGGCAGGCAAAGCTGTCATTTTGTCATCTGGGAAGCCTaGTTGGTAGCAGTGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: GVRSWNSTSSKGRQSCHFVIWEA*LVAVTT Trigger: TGTGGTCACTGCTACCAAGCAGGCTTCCCAGATGAC...AAAATGACAGCTTTGCCTGCCCTTTGAGGAGGTCGAGTTCCAAGACCTCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| CDS-3UTR GCA 90 bp | GACTCCACTTTTCTGGCACCCAGGACTCCTGGTTCCTTAGTTTCTAAACATGGTCGCGGTTGTGGGGTGTaGAGAGATGTTCCCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DSTFLAPRTPGSLVSKHGRGCGV*RDVPGG Trigger: ACCTCCGGGAACATCTCTGCACACCCCACAACCGCG...ACCATGTTTAGAAACTAAGGAACCAGGAGTCCTGGGTGCCAGAAAAGTGGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
||
| CDS-3UTR CCA 90 bp | ACGTTACTGTTTCTCCTATTCATGATGATGATTAGCACCTGTCACATGCAAGGAACCACAGCCCCCTCCTaGGCCCGGCTAGGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLFLLFMMMISTCHMQGTTAPS*ARLGLP Trigger: AGGAAGGCCTAGCCGGGCCCAGGAGGGGGCTGTGGT...TCCTTGCATGTGACAGGTGCTAATCATCATCATGAATAGGAGAAACAGTAACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS-3UTR TCA 90 bp | GCCGGCTTAACCTGGCCTCCCATTTTCTGTGTCTTCACAACTGCCGTGGCCTACCCATCACTGGTAAAATaGCTCCAGTGTTTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGLTWPPIFCVFTTAVAYPSLVK*LQCFSF Trigger: GAAAGAGAAACACTGGAGTCATTTTACCAGTGATGG...GTAGGCCACGGCAGTTGTGAAGACACAGAAAATGGGAGGCCAGGTTAAGCCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS-3UTR CCA 90 bp | GACTCCACTTTTCTGGCACCCAGGACTCCTGGTTCCTTAGTTTCTAAACATGGTTGCCGTGTGGAGCTCTaGAAACAGCAGGAGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSTFLAPRTPGSLVSKHGCRVEL*KQQEDQ Trigger: CTGATCCTCCTGCTGTTTCCAGAGCTCCACACGGCA...ACCATGTTTAGAAACTAAGGAACCAGGAGTCCTGGGTGCCAGAAAAGTGGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 72 bp | GCCTGCGACATAGCATTCCAGATCCAGGACTGTCAGTaGTCCCCTCTCTTTCCAACCCTTTTCAGTCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ACDIAFQIQDCQ*SPLFPTLFSQG Trigger: TCCTTGACTGAAAAGGGTTGGAAAGAGAGGGGACAACTGACAGTCCTGGATCTGGAATGCTATGTCGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS-3UTR CCA 90 bp | AGCTTGGAAAGAAGAACAAGCATATTTGATTTCTTCTCGATCTGCCAGCTTTCCCCCACAGTGCAGAGCTaGGGAGGTGGGAGTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLERRTSIFDFFSICQLSPTVQS*GGGSGS Trigger: AGACCCACTCCCACCTCCCCAGCTCTGCACTGTGGG...GGAAAGCTGGCAGATCGAGAAGAAATCAAATATGCTTGTTCTTCTTTCCAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS-3UTR CCA 90 bp | AGCTTGGAAAGAAGAACAAGCATATTTGATTTCTTCTCGATCTGCCAGCTTTCCATCCCTGGTCCCCGTTaGCTGTCTCCGGTTCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: SLERRTSIFDFFSICQLSIPGPR*LSPVPR Trigger: GCGTGGAACCGGAGACAGCCAACGGGGACCAGGGAT...GGAAAGCTGGCAGATCGAGAAGAAATCAAATATGCTTGTTCTTCTTTCCAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 72 bp | CCCTTTTCAGTCAAGGAAGCCTCTTGTTTTCGCCAATaGAAACTGCTGCAATGCTGGTGTCGAGCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFSVKEASCFRQ*KLLQCWCRAEE Trigger: CTCTTCTGCTCGACACCAGCATTGCAGCAGTTTCAATTGGCGAAAACAAGAGGCTTCCTTGACTGAAAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 72 bp | AGCATATTTGATTTCTTCTCGATCTGCCAGCTTTCCTaGGAGCCTGACCCTGGACCAGACTGGTTATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIFDFFSICQLS*EPDPGPDWLSQ Trigger: TTGGGATAACCAGTCTGGTCCAGGGTCAGGCTCCAAGGAAAGCTGGCAGATCGAGAAGAAATCAAATATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 72 bp | GGCTTGGCCATGGATCTGTCCCATGTCTGCTCTTCCTaGAGATTTGGAAACCTCATTCCCTGCAGTATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLAMDLSHVCSS*RFGNLIPCSIN Trigger: GTTTATACTGCAGGGAATGAGGTTTCCAAATCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 72 bp | CCTCTCTTTCCAACCCTTTTCAGTCAAGGAAGCCTCTaGTTTTCGCCAATTGAAACTGCTGCAATGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLFPTLFSQGSL*FSPIETAAMLV Trigger: CACCAGCATTGCAGCAGTTTCAATTGGCGAAAACAAGAGGCTTCCTTGACTGAAAAGGGTTGGAAAGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS-3UTR CCA 90 bp | AGCTTGGAAAGAAGAACAAGCATATTTGATTTCTTCTCGATCTGCCAGCTTTCCTGGCACCGTCTGTCATaGTCAGGAAGAACATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLERRTSIFDFFSICQLSWHRLS*SGRTWW Trigger: CCACCATGTTCTTCCTGACCATGACAGACGGTGCCA...GGAAAGCTGGCAGATCGAGAAGAAATCAAATATGCTTGTTCTTCTTTCCAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS-3UTR CCA 90 bp | ACGTTACTGTTTCTCCTATTCATGATGATGATTAGCACCTGTCACATGCAAGGAGGTTCCGGTGGAATTTaGCATAGCAACGCAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLLFLLFMMMISTCHMQGGSGGI*HSNAAL Trigger: AAGGGCTGCGTTGCTATGCCAAATTCCACCGGAACC...TCCTTGCATGTGACAGGTGCTAATCATCATCATGAATAGGAGAAACAGTAACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| 3UTR CAA 72 bp | TGTTACAAACGTAGCCACATCCCCAGCCCTAATGTCTaGTTTTTAAGGAAGATACACCTGCCAAATATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CYKRSHIPSPNV*FLRKIHLPNML Trigger: CAGCATATTTGGCAGGTGTATCTTCCTTAAAAACAAGACATTAGGGCTGGGGATGTGGCTACGTTTGTAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS GCA 90 bp | TGCAGAAGGCCAGCAGGGGGCTGTCCGAGTGTCATCTGGGAAGCCTaGTTGGTAGCAGTGACCACAGCCCCCTCCTGGGCCCGGCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CRRPAGGCPSVIWEA*LVAVTTAPSWARLG Trigger: GCCTAGCCGGGCCCAGGAGGGGGCTGTGGTCACTGCTACCAAGCAGGCTTCCCAGATGACACTCGGACAGCCCCCTGCTGGCCTTCTGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS TCA 90 bp | TGGTACCCTCCAGCATCCGGTCTTCAGAGGGTTCCACCTTCTTCATaGGGGAGCTGGGGCCACGGATGGCAGCTCGGCCTCGGTGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WYPPASGLQRVPPSS*GSWGHGWQLGLGAV Trigger: GACTGCACCGAGGCCGAGCTGCCATCCGTGGCCCCAGCTCCCTCATGAAGAAGGTGGAACCCTCTGAAGACCGGATGCTGGAGGGTACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS GCA 90 bp | GGCCACGGATGGCAGCTCGGCCTCGGTGCAGTCGCAGACGGTCCCTaGGTCTCTTGTGTTCTCTGCCACGTTTCTTCACCCTCTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GHGWQLGLGAVADGP*VSCVLCHVSSPSPK Trigger: CTTGGGAGAGGGTGAAGAAACGTGGCAGAGAACACAAGAGACGCAGGGACCGTCTGCGACTGCACCGAGGCCGAGCTGCCATCCGTGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS CCA 90 bp | GGCAGGTTCCGGGCAGAGGATCCAGATGCAAGGGTGCCTGCCGTGTaGAGCTCTGGAAACAGCAGGAGGATCAGGAACAGCGTGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GRFRAEDPDARVPAV*SSGNSRRIRNSVGT Trigger: GGTCCCCACGCTGTTCCTGATCCTCCTGCTGTTTCCAGAGCTCCACACGGCAGGCACCCTTGCATCTGGATCCTCTGCCCGGAACCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS GCA 90 bp | GGTCTCCGGCAGGTTCCGGGCAGAGGATCCAGATGCAAGGGTGCCTaGCGTGTGGAGCTCTGGAAACAGCAGGAGGATCAGGAACAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GLRQVPGRGSRCKGA*RVELWKQQEDQEQR Trigger: ACGCTGTTCCTGATCCTCCTGCTGTTTCCAGAGCTCCACACGGCAGGCACCCTTGCATCTGGATCCTCTGCCCGGAACCTGCCGGAGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS CCA 90 bp | TCCTTATTCTGCAGAAGGCCAGCAGGGGGCTGTCCGAGTGTCATCTaGGAAGCCTGCTTGGTAGCAGTGACCACAGCCCCCTCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLFCRRPAGGCPSVI*EACLVAVTTAPSWA Trigger: GGCCCAGGAGGGGGCTGTGGTCACTGCTACCAAGCAGGCTTCCCAGATGACACTCGGACAGCCCCCTGCTGGCCTTCTGCAGAATAAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS GCA 90 bp | AGTGGGTCTCCGGCAGGTTCCGGGCAGAGGATCCAGATGCAAGGGTaGCTGCCGTGTGGAGCTCTGGAAACAGCAGGAGGATCAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: SGSPAGSGQRIQMQG*LPCGALETAGGSGT Trigger: TGTTCCTGATCCTCCTGCTGTTTCCAGAGCTCCACACGGCAGGCACCCTTGCATCTGGATCCTCTGCCCGGAACCTGCCGGAGACCCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS-3UTR CAA 90 bp | GAAGTGGGAGGAGGGGGAAACGGAATGGGAGCAAGCCCAGGGCCTCGCGCAGGTGTTTCTCTTTCTTCTTaGCAGAAGGCCAGACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EVGGGGNGMGASPGPRAGVSLSS*QKARPL Trigger: CAGAGGTCTGGCCTTCTGCAAAGAAGAAAGAGAAAC...ACCTGCGCGAGGCCCTGGGCTTGCTCCCATTCCGTTTCCCCCTCCTCCCACTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS TCA 90 bp | AACGCAGCCCTTCCATGCACATGCAGTCGTCGAAACATTTGTTGTTaGGGCCGCGGTTGTGGGGTGTGCAGAGATGTTCCCGGAGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: NAALPCTCSRRNICC*GRGCGVCRDVPGGH Trigger: GTGACCTCCGGGAACATCTCTGCACACCCCACAACCGCGGCCTCAACAACAAATGTTTCGACGACTGCATGTGCATGGAAGGGCTGCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS-3UTR CAA 90 bp | AGTGCTGAACTGTCCAAACGACTGTCCCCGGCCCCCAGCATCTGTCCTCCATCTTCGAAACATTTGTTGTaGAGGCCGCGGTTGTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SAELSKRLSPAPSICPPSSKHLL*RPRLWG Trigger: ACCCCACAACCGCGGCCTCAACAACAAATGTTTCGA...AGATGGAGGACAGATGCTGGGGGCCGGGGACAGTCGTTTGGACAGTTCAGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS CCA 90 bp | ATGCACATGCAGTCGTCGAAACATTTGTTGTTGAGGCCGCGGTTGTaGGGTGTGCAGAGATGTTCCCGGAGGTCACAGCAAGTTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MHMQSSKHLLLRPRL*GVQRCSRRSQQVPG Trigger: GCCAGGAACTTGCTGTGACCTCCGGGAACATCTCTGCACACCCCACAACCGCGGCCTCAACAACAAATGTTTCGACGACTGCATGTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS-3UTR CAA 90 bp | ACAAGAGGAGGCTTGGCCATGGATCTGTCCCATGTCTGCTCTTCCTTGAGATTTTTGTTGAGGCCGCGGTaGTGGGGTGTGCAGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: TRGGLAMDLSHVCSSLRFLLRPR*WGVQRC Trigger: ACATCTCTGCACACCCCACAACCGCGGCCTCAACAA...AAATCTCAAGGAAGAGCAGACATGGGACAGATCCATGGCCAAGCCTCCTCTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS-3UTR CAA 90 bp | GGGGTGAGGTCTTGGAACTCGACCTCCTCAAAGGGCAGGCAAAGCTGTCATTTTCAGTCGTCGAAACATTaGTTGTTGAGGCCGCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVRSWNSTSSKGRQSCHFQSSKH*LLRPRL Trigger: CAACCGCGGCCTCAACAACAAATGTTTCGACGACTG...AAAATGACAGCTTTGCCTGCCCTTTGAGGAGGTCGAGTTCCAAGACCTCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS GCA 72 bp | CCGACGGCCATGATGGCTTGCCTGGGACACCCACAGTaGAGAGCTGGGGAGGTGGGAGTGGGTCTCCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PTAMMACLGHPQ*RAGEVGVGLRQ Trigger: CTGCCGGAGACCCACTCCCACCTCCCCAGCTCTGCACTGTGGGTGTCCCAGGCAAGCCATCATGGCCGTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS GCA 72 bp | AGGGAGCTGGGGCCACGGATGGCAGCTCGGCCTCGGTaGAGTCGCAGACGGTCCCTGCGTCTCTTGTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RELGPRMAARPR*SRRRSLRLLCS Trigger: AGAACACAAGAGACGCAGGGACCGTCTGCGACTGCACCGAGGCCGAGCTGCCATCCGTGGCCCCAGCTCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS CAA 90 bp | AGAAGGCCAGCAGGGGGCTGTCCGAGTGTCATCTGGGAAGCCTGCTaGGTAGCAGTGACCACAGCCCCCTCCTGGGCCCGGCTAGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RRPAGGCPSVIWEAC*VAVTTAPSWARLGL Trigger: AAGGCCTAGCCGGGCCCAGGAGGGGGCTGTGGTCACTGCTACCAAGCAGGCTTCCCAGATGACACTCGGACAGCCCCCTGCTGGCCTTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS GCA 72 bp | GTGGGTCTCCGGCAGGTTCCGGGCAGAGGATCCAGATaGAAGGGTGCCTGCCGTGTGGAGCTCTGGAAACAG | + |
|
Preference number: 6 (lower is better) Translates to: VGLRQVPGRGSR*KGACRVELWKQ Trigger: CTGTTTCCAGAGCTCCACACGGCAGGCACCCTTGCATCTGGATCCTCTGCCCGGAACCTGCCGGAGACCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS CCA 72 bp | TGCAGAAGGCCAGCAGGGGGCTGTCCGAGTGTCATCTaGGAAGCCTGCTTGGTAGCAGTGACCACAGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: CRRPAGGCPSVI*EACLVAVTTAP Trigger: GGGGGCTGTGGTCACTGCTACCAAGCAGGCTTCCCAGATGACACTCGGACAGCCCCCTGCTGGCCTTCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS GCA 72 bp | CAGGTTCCGGGCAGAGGATCCAGATGCAAGGGTGCCTaGCGTGTGGAGCTCTGGAAACAGCAGGAGGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: QVPGRGSRCKGA*RVELWKQQEDQ Trigger: CTGATCCTCCTGCTGTTTCCAGAGCTCCACACGGCAGGCACCCTTGCATCTGGATCCTCTGCCCGGAACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS CAA 90 bp | CAACGCAGCCCTTCCATGCACATGCAGTCGTCGAAACATTTGTTGTaGAGGCCGCGGTTGTGGGGTGTGCAGAGATGTTCCCGGAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: QRSPSMHMQSSKHLL*RPRLWGVQRCSRRS Trigger: TGACCTCCGGGAACATCTCTGCACACCCCACAACCGCGGCCTCAACAACAAATGTTTCGACGACTGCATGTGCATGGAAGGGCTGCGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS CAA 72 bp | CGCAGCCCTTCCATGCACATGCAGTCGTCGAAACATTaGTTGTTGAGGCCGCGGTTGTGGGGTGTGCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSPSMHMQSSKH*LLRPRLWGVQR Trigger: TCTCTGCACACCCCACAACCGCGGCCTCAACAACAAATGTTTCGACGACTGCATGTGCATGGAAGGGCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS CCA 72 bp | CAGTCGTCGAAACATTTGTTGTTGAGGCCGCGGTTGTaGGGTGTGCAGAGATGTTCCCGGAGGTCACAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QSSKHLLLRPRL*GVQRCSRRSQQ Trigger: TTGCTGTGACCTCCGGGAACATCTCTGCACACCCCACAACCGCGGCCTCAACAACAAATGTTTCGACGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS CAA 72 bp | ATGCAGTCGTCGAAACATTTGTTGTTGAGGCCGCGGTaGTGGGGTGTGCAGAGATGTTCCCGGAGGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: MQSSKHLLLRPR*WGVQRCSRRSQ Trigger: CTGTGACCTCCGGGAACATCTCTGCACACCCCACAACCGCGGCCTCAACAACAAATGTTTCGACGACTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS CAA 90 bp | TCCATGCACATGCAGTCGTCGAAACATTTGTTGTTGAGGCCGCGGTaGTGGGGTGTGCAGAGATGTTCCCGGAGGTCACAGCAAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SMHMQSSKHLLLRPR*WGVQRCSRRSQQVP Trigger: AGGAACTTGCTGTGACCTCCGGGAACATCTCTGCACACCCCACAACCGCGGCCTCAACAACAAATGTTTCGACGACTGCATGTGCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS TCA 72 bp | CTTCCATGCACATGCAGTCGTCGAAACATTTGTTGTTaGGGCCGCGGTTGTGGGGTGTGCAGAGATGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPCTCSRRNICC*GRGCGVCRDVP Trigger: GGGAACATCTCTGCACACCCCACAACCGCGGCCTCAACAACAAATGTTTCGACGACTGCATGTGCATGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS CAA 72 bp | CCTTCCATGCACATGCAGTCGTCGAAACATTTGTTGTaGAGGCCGCGGTTGTGGGGTGTGCAGAGATGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSMHMQSSKHLL*RPRLWGVQRCS Trigger: GGAACATCTCTGCACACCCCACAACCGCGGCCTCAACAACAAATGTTTCGACGACTGCATGTGCATGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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| CDS CAA 72 bp | AGCCCTTCCATGCACATGCAGTCGTCGAAACATTTGTaGTTGAGGCCGCGGTTGTGGGGTGTGCAGAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: SPSMHMQSSKHL*LRPRLWGVQRC Trigger: ACATCTCTGCACACCCCACAACCGCGGCCTCAACAACAAATGTTTCGACGACTGCATGTGCATGGAAGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030862.5 |
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