Pregenerated sensors for DRAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024914Ensembl transcript IDs: ENSMUST00000025853.16, ENSMUST00000113673.9, ENSMUST00000113674.8, ENSMUST00000136579.3, ENSMUST00000148219.9
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTaGGGTACAGGGGCACAGGGCGCTAGGAGTCATAAT | + |
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Preference number: 3 (lower is better) Translates to: PKQLILTRREHG*GTGAQGARSHN Trigger: ATTATGACTCCTAGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTAGGAGTCATTCTTCCTGCCGCTGCTaGCCGGTTTCCGGCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LTRREHGWGTGAQGARSHSSCRC*PVSGPF Trigger: GAAGGGGCCGGAAACCGGGCAGCAGCGGCAGGAAGA...ATGACTCCTAGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTAGGAGTCATAATCTCTTCCTGCCGCTGCTaGCCGGTTTCCGGCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LEESMAGVQGHRALGVIISSCRC*PVSGPF Trigger: GAAGGGGCCGGAAACCGGGCAGCAGCGGCAGGAAGA...GATTATGACTCCTAGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | ACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTAGGAGTCATAATCGTTCTTCCTGCCGCTaGTGCCCGGTTTCCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: TRREHGWGTGAQGARSHNRSSCR*CPVSGP Trigger: GGGGCCGGAAACCGGGCAGCAGCGGCAGGAAGAACG...ATTATGACTCCTAGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTAGGAGTCATTGCCTTTGCTTCCCGTaGCTCCGTTCTTCCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LTRREHGWGTGAQGARSHCLCFP*LRSSCR Trigger: GCGGCAGGAAGAACGGAGGCACGGGAAGCAAAGGCA...ATGACTCCTAGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | AGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTAGGAGTCATAATCCTGATGACAGGCACAGCTaGCGCCACCTTCCCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RREHGWGTGAQGARSHNPDDRHS*RHLPNL Trigger: GAGATTGGGAAGGTGGCGGCAGCTGTGCCTGTCATC...AGGATTATGACTCCTAGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | AAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCCGTTCTTCCTGCCGCTaGTGCCCGGTTTCCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: KQLILTRREHGWGTGAQGRSSCR*CPVSGP Trigger: GGGGCCGGAAACCGGGCAGCAGCGGCAGGAAGAACG...GCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTTCCTCCCCATCCCCCTaGATGTCAGGCACTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: QLILTRREHGWGTGAQGASSPSP*MSGTDA Trigger: GGCATCAGTGCCTGACATGCAGGGGGATGGGGAGGA...AGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGTCTTCCTGCCGCTGCTaGCCGGTTTCCGGCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKQLILTRREHGWGTGAQSSCRC*PVSGPF Trigger: GAAGGGGCCGGAAACCGGGCAGCAGCGGCAGGAAGA...CTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR CCA 90 bp | ATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTAGGAGTCGAGACTGGGTCACCTaGCAAGCCTTCTTCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILTRREHGWGTGAQGARSRDWVT*QAFFNR Trigger: CCTGTTGAAGAAGGCTTGCCAGGTGACCCAGTCTCG...ACTCCTAGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
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| CDS-3UTR CCA 90 bp | CAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTTTGTCCCCATCCACGTaGTTGTCCTCCCCATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QLILTRREHGWGTGAQGALSPST*LSSPSP Trigger: GGGGGATGGGGAGGACAACCACGTGGATGGGGACAA...AGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACATCTTCCTGCCGCTGCTaGCCGGTTTCCGGCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LLSPKQLILTRREHGWGTSSCRC*PVSGPF Trigger: GAAGGGGCCGGAAACCGGGCAGCAGCGGCAGGAAGA...TGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | AGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTAGGAGTCATAATCCTACAGCTTCTTGTCTTTaGCTTTGCTTCCCGTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RREHGWGTGAQGARSHNPTASCL*LCFPCL Trigger: GAGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGT...AGGATTATGACTCCTAGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
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| CDS-3UTR CCA 90 bp | CCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGGCAGGAGGGTGACTaGCTTGGGGTGGAAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PKQLILTRREHGWGTGAQGQEGD*LGVEAV Trigger: CACAGCTTCCACCCCAAGCCAGTCACCCTCCTGCCC...CTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGTGCCTTTGCTTCCCGTaGCTCCGTTCTTCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPKQLILTRREHGWGTGCLCFP*LRSSCR Trigger: GCGGCAGGAAGAACGGAGGCACGGGAAGCAAAGGCA...CCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | ATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTAGGAGTACAGCTTCTTGTCTTTaGCTTTGCTTCCCGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILTRREHGWGTGAQGARSTASCL*LCFPCL Trigger: GAGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGT...ACTCCTAGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
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| CDS-3UTR CCA 90 bp | CTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGTTGTCCCCATCCACGTaGTTGTCCTCCCCATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPKQLILTRREHGWGTGLSPST*LSSPSP Trigger: GGGGGATGGGGAGGACAACCACGTGGATGGGGACAA...CCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR CCA 90 bp | CTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGCAGGAGGGTGACTaGCTTGGGGTGGAAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LLSPKQLILTRREHGWGTGQEGD*LGVEAV Trigger: CACAGCTTCCACCCCAAGCCAGTCACCCTCCTGCCC...TGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTAGGAGTCATAAGAAGTCAAACTGCTaGTCGAGTTCAATGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTRREHGWGTGAQGARSHKKSNC*SSSMHC Trigger: GCAGTGCATTGAACTCGAGCAGCAGTTTGACTTCTT...ATGACTCCTAGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTCCTCCCCATCCCCCTaGATGTCAGGCACTGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTFLLSPKQLILTRREHGSSPSP*MSGTDA Trigger: GGCATCAGTGCCTGACATGCAGGGGGATGGGGAGGA...GCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACATCCTCCCCATCCCCCTaGATGTCAGGCACTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: LLSPKQLILTRREHGWGTSSPSP*MSGTDA Trigger: GGCATCAGTGCCTGACATGCAGGGGGATGGGGAGGA...TGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | AAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGACGTTCTTCCTGCCGCTaGTGCCCGGTTTCCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: KNNPTFLLSPKQLILTRRRSSCR*CPVSGP Trigger: GGGGCCGGAAACCGGGCAGCAGCGGCAGGAAGAACG...TCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | TTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTTGCCTTTGCTTCCCGTaGCTCCGTTCTTCCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: FLLSPKQLILTRREHGWGCLCFP*LRSSCR Trigger: GCGGCAGGAAGAACGGAGGCACGGGAAGCAAAGGCA...ACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGTCAGACTCATCCTCCTaGTCAGAGTCTGTCCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: PKQLILTRREHGWGTGAQSDSSS*SESVPD Trigger: GTCCGGGACAGACTCTGAGCAGGAGGATGAGTCTGA...CTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR CCA 90 bp | CTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGCGAGACTGGGTCACCTaGCAAGCCTTCTTCAACAGG | + |
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Preference number: 4 (lower is better) Translates to: LSPKQLILTRREHGWGTGRDWVT*QAFFNR Trigger: CCTGTTGAAGAAGGCTTGCCAGGTGACCCAGTCTCG...CCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR CCA 90 bp | AAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCTTGGCATTTCGAGACTaGGTCACCTGGCAAGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: KQLILTRREHGWGTGAQGLAFRD*VTWQAF Trigger: GAAGGCTTGCCAGGTGACCCAGTCTCGAAATGCCAA...GCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | AAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGATCTTCCTGCCGCTGCTaGCCGGTTTCCGGCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: KNNPTFLLSPKQLILTRRSSCRC*PVSGPF Trigger: GAAGGGGCCGGAAACCGGGCAGCAGCGGCAGGAAGA...TCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTCAGACTCATCCTCCTaGTCAGAGTCTGTCCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: PTFLLSPKQLILTRREHGSDSSS*SESVPD Trigger: GTCCGGGACAGACTCTGAGCAGGAGGATGAGTCTGA...GCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR CCA 90 bp | CCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCCGAGACTGGGTCACCTaGCAAGCCTTCTTCAACAGG | + |
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Preference number: 4 (lower is better) Translates to: PTFLLSPKQLILTRREHGRDWVT*QAFFNR Trigger: CCTGTTGAAGAAGGCTTGCCAGGTGACCCAGTCTCG...GCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR CCA 90 bp | CCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCGGGTATGAAGGGAGTTaGAGGGCTCTGAAAGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PTFLLSPKQLILTRREHGGYEGS*RALKVG Trigger: GCCCACTTTCAGAGCCCTCCAACTCCCTTCATACCC...GCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025853.16 ENSMUST00000113674.8 ENSMUST00000136579.3 |
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| CDS-3UTR GCA 90 bp | AACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGTCCTCCCCATCCCCCTaGATGTCAGGCACTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: NNPTFLLSPKQLILTRRESSPSP*MSGTDA Trigger: GGCATCAGTGCCTGACATGCAGGGGGATGGGGAGGA...CTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | AAATTTAAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTCGTTCTTCCTGCCGCTaGTGCCCGGTTTCCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: KFKNNPTFLLSPKQLILTRSSCR*CPVSGP Trigger: GGGGCCGGAAACCGGGCAGCAGCGGCAGGAAGAACG...AGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTTAAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | AATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATTGCCTTTGCTTCCCGTaGCTCCGTTCTTCCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: NPTFLLSPKQLILTRREHCLCFP*LRSSCR Trigger: GCGGCAGGAAGAACGGAGGCACGGGAAGCAAAGGCA...ATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGTCTTGTCTTTGCCTTTaGTTCCCGTGCCTCCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PKQLILTRREHGWGTGAQSCLCL*FPCLRS Trigger: AGAACGGAGGCACGGGAAGCAAAGGCAAAGACAAGA...CTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR CCA 90 bp | AACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGTTGTCCCCATCCACGTaGTTGTCCTCCCCATCCCCC | + |
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Preference number: 4 (lower is better) Translates to: NNPTFLLSPKQLILTRRELSPST*LSSPSP Trigger: GGGGGATGGGGAGGACAACCACGTGGATGGGGACAA...CTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR TCA 90 bp | CCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCCTGCATGTCAGGCACTaGTGCCACCAAGTCTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: PTFLLSPKQLILTRREHGLHVRH*CHQVFQ Trigger: TTGAAAGACTTGGTGGCATCAGTGCCTGACATGCAG...GCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR TCA 90 bp | CTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACACTGCATGTCAGGCACTaGTGCCACCAAGTCTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: LLSPKQLILTRREHGWGTLHVRH*CHQVFQ Trigger: TTGAAAGACTTGGTGGCATCAGTGCCTGACATGCAG...TGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | AATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGATGACAGGCACAGCTaGCGCCACCTTCCCAATCTC | + |
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Preference number: 4 (lower is better) Translates to: NPTFLLSPKQLILTRREHDDRHS*RHLPNL Trigger: GAGATTGGGAAGGTGGCGGCAGCTGTGCCTGTCATC...ATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | AAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCAAGAAGTCAAACTGCTaGTCGAGTTCAATGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: KQLILTRREHGWGTGAQGKKSNC*SSSMHC Trigger: GCAGTGCATTGAACTCGAGCAGCAGTTTGACTTCTT...GCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | CCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTCTTGTCTTTGCCTTTaGTTCCCGTGCCTCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTFLLSPKQLILTRREHGSCLCL*FPCLRS Trigger: AGAACGGAGGCACGGGAAGCAAAGGCAAAGACAAGA...GCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR GCA 90 bp | CCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCACAGCTTCTTGTCTTTaGCTTTGCTTCCCGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTFLLSPKQLILTRREHGTASCL*LCFPCL Trigger: GAGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGT...GCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGACGTGGTCATGGTTTTaGCATTTCGAGACTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPKQLILTRREHGWGTGTWSWF*HFETGS Trigger: TGACCCAGTCTCGAAATGCCAAAACCATGACCACGT...CCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR CCA 90 bp | CCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGACGTGGTCATGGTTTTaGCATTTCGAGACTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKQLILTRREHGWGTGAQTWSWF*HFETGS Trigger: TGACCCAGTCTCGAAATGCCAAAACCATGACCACGT...CTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR TCA 90 bp | TTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTCTGCATGTCAGGCACTaGTGCCACCAAGTCTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLLSPKQLILTRREHGWGLHVRH*CHQVFQ Trigger: TTGAAAGACTTGGTGGCATCAGTGCCTGACATGCAG...ACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGATCTCTTCGTCCGTCTaGATGATCTTTTTGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPKQLILTRREHGWGTGISSSV*MIFLIR Trigger: GCGGATCAAAAAGATCATGCAGACGGACGAAGAGAT...CCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025853.16 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGAAGAAGTCAAACTGCTaGTCGAGTTCAATGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPKQLILTRREHGWGTGKKSNC*SSSMHC Trigger: GCAGTGCATTGAACTCGAGCAGCAGTTTGACTTCTT...CCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR GCA 90 bp | AAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCTTCAAGAAGTCAAACTaGTGCTCGAGTTCAATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQLILTRREHGWGTGAQGFKKSN*CSSSMH Trigger: GTGCATTGAACTCGAGCAGCAGTTTGACTTCTTGAA...GCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGCTTCTTGTCTTTaGCTTTGCTTCCCGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLLSPKQLILTRREHGWGTASCL*LCFPCL Trigger: GAGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGT...ACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR CCA 90 bp | AACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCGAGACTGGGTCACCTaGCAAGCCTTCTTCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NNPTFLLSPKQLILTRRERDWVT*QAFFNR Trigger: CCTGTTGAAGAAGGCTTGCCAGGTGACCCAGTCTCG...CTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS-3UTR CCA 90 bp | CTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAACGTGGTCATGGTTTTaGCATTTCGAGACTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSPKQLILTRREHGWGTTWSWF*HFETGS Trigger: TGACCCAGTCTCGAAATGCCAAAACCATGACCACGT...TGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR CCA 90 bp | AAATTTAAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTGGGCAGGAGGGTGACTaGCTTGGGGTGGAAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KFKNNPTFLLSPKQLILTGQEGD*LGVEAV Trigger: CACAGCTTCCACCCCAAGCCAGTCACCCTCCTGCCC...AGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTTAAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS-3UTR CCA 90 bp | AACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGGGGTATGAAGGGAGTTaGAGGGCTCTGAAAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NNPTFLLSPKQLILTRREGYEGS*RALKVG Trigger: GCCCACTTTCAGAGCCCTCCAACTCCCTTCATACCC...CTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025853.16 ENSMUST00000113674.8 |
||
| CDS-3UTR GCA 90 bp | CCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCATCTCTTCGTCCGTCTaGATGATCTTTTTGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PTFLLSPKQLILTRREHGISSSV*MIFLIR Trigger: GCGGATCAAAAAGATCATGCAGACGGACGAAGAGAT...GCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025853.16 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGTTCAAGAAGTCAAACTaGTGCTCGAGTTCAATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSPKQLILTRREHGWGTGFKKSN*CSSSMH Trigger: GTGCATTGAACTCGAGCAGCAGTTTGACTTCTTGAA...CCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR GCA 90 bp | AAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGATCAGACTCATCCTCCTaGTCAGAGTCTGTCCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KNNPTFLLSPKQLILTRRSDSSS*SESVPD Trigger: GTCCGGGACAGACTCTGAGCAGGAGGATGAGTCTGA...TCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACGTGGTCATGGTTTTaGCATTTCGAGACTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLLSPKQLILTRREHGWGTWSWF*HFETGS Trigger: TGACCCAGTCTCGAAATGCCAAAACCATGACCACGT...ACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR CCA 90 bp | AAATTTAAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTTTGTCCCCATCCACGTaGTTGTCCTCCCCATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KFKNNPTFLLSPKQLILTLSPST*LSSPSP Trigger: GGGGGATGGGGAGGACAACCACGTGGATGGGGACAA...AGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTTAAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTAAGAAGTCAAACTGCTaGTCGAGTTCAATGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLLSPKQLILTRREHGWGKKSNC*SSSMHC Trigger: GCAGTGCATTGAACTCGAGCAGCAGTTTGACTTCTT...ACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR GCA 90 bp | AACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGTCTTGTCTTTGCCTTTaGTTCCCGTGCCTCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NNPTFLLSPKQLILTRRESCLCL*FPCLRS Trigger: AGAACGGAGGCACGGGAAGCAAAGGCAAAGACAAGA...CTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | TTTAAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGATCAGACTCATCCTCCTaGTCAGAGTCTGTCCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FKNNPTFLLSPKQLILTRSDSSS*SESVPD Trigger: GTCCGGGACAGACTCTGAGCAGGAGGATGAGTCTGA...TCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS-3UTR GCA 90 bp | TTTAAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGATCTTGTCTTTGCCTTTaGTTCCCGTGCCTCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKNNPTFLLSPKQLILTRSCLCL*FPCLRS Trigger: AGAACGGAGGCACGGGAAGCAAAGGCAAAGACAAGA...TCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | AAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAATCTCTTCGTCCGTCTaGATGATCTTTTTGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KNNPTFLLSPKQLILTRRISSSV*MIFLIR Trigger: GCGGATCAAAAAGATCATGCAGACGGACGAAGAGAT...TCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025853.16 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | AAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAAAGAAGTCAAACTGCTaGTCGAGTTCAATGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KNNPTFLLSPKQLILTRRKKSNC*SSSMHC Trigger: GCAGTGCATTGAACTCGAGCAGCAGTTTGACTTCTT...TCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS-3UTR GCA 90 bp | AACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGTTCAAGAAGTCAAACTaGTGCTCGAGTTCAATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NNPTFLLSPKQLILTRREFKKSN*CSSSMH Trigger: GTGCATTGAACTCGAGCAGCAGTTTGACTTCTTGAA...CTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS-3UTR GCA 90 bp | AAATTTAAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTTCTTGTCTTTGCCTTTaGTTCCCGTGCCTCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KFKNNPTFLLSPKQLILTSCLCL*FPCLRS Trigger: AGAACGGAGGCACGGGAAGCAAAGGCAAAGACAAGA...AGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTTAAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS-3UTR GCA 90 bp | AAATTTAAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTACAGCTTCTTGTCTTTaGCTTTGCTTCCCGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KFKNNPTFLLSPKQLILTTASCL*LCFPCL Trigger: GAGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGT...AGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTTAAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR GCA 90 bp | AAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGATTCAAGAAGTCAAACTaGTGCTCGAGTTCAATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KNNPTFLLSPKQLILTRRFKKSN*CSSSMH Trigger: GTGCATTGAACTCGAGCAGCAGTTTGACTTCTTGAA...TCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS-3UTR CCA 90 bp | AAATTTAAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTACGTGGTCATGGTTTTaGCATTTCGAGACTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KFKNNPTFLLSPKQLILTTWSWF*HFETGS Trigger: TGACCCAGTCTCGAAATGCCAAAACCATGACCACGT...AGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTTAAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS GCA 90 bp | CCTCCTGCTCAGAGTCTGTCCCGGACAGCTTCTTGTCTTTGCCTTTaGTTCCCGTGCCTCCGTTCTTCCTGCCGCTGCTGCCCGGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPAQSLSRTASCLCL*FPCLRSSCRCCPVS Trigger: GGAAACCGGGCAGCAGCGGCAGGAAGAACGGAGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGTCCGGGACAGACTCTGAGCAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS GCA 90 bp | TGTCTTTGCCTTTGCTTCCCGTGCCTCCGTTCTTCCTGCCGCTGCTaGCCGGTTTCCGGCCCCTTCGGGAAGGTACAGTCCATCTTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLCLCFPCLRSSCRC*PVSGPFGKVQSIFE Trigger: CTCGAAGATGGACTGTACCTTCCCGAAGGGGCCGGAAACCGGGCAGCAGCGGCAGGAAGAACGGAGGCACGGGAAGCAAAGGCAAAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113674.8 |
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| CDS GCA 90 bp | ACTCATCCTCCTGCTCAGAGTCTGTCCCGGACAGCTTCTTGTCTTTaGCTTTGCTTCCCGTGCCTCCGTTCTTCCTGCCGCTGCTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: THPPAQSLSRTASCL*LCFPCLRSSCRCCP Trigger: CGGGCAGCAGCGGCAGGAAGAACGGAGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGTCCGGGACAGACTCTGAGCAGGAGGATGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR CAA 90 bp | CTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTAGGAGTCATCCCCTTCGAGGACCCTaGTCCCCATCCACGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTRREHGWGTGAQGARSHPLRGP*SPSTWL Trigger: CAACCACGTGGATGGGGACAAGGGTCCTCGAAGGGG...ATGACTCCTAGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
||
| CDS GCA 90 bp | ATGACAGGCACAGCTGCCGCCACCTTCCCAATCTCTTCGTCCGTCTaGATGATCTTTTTGATCCGCGCCGGCGGAAACCGCGCGTTATAC | + |
|
Preference number: 5 (lower is better) Translates to: MTGTAAATFPISSSV*MIFLIRAGGNRALY Trigger: GTATAACGCGCGGTTTCCGCCGGCGCGGATCAAAAAGATCATGCAGACGGACGAAGAGATTGGGAAGGTGGCGGCAGCTGTGCCTGTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025853.16 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS GCA 90 bp | CTCCAGGAAGAGCTCAAGGGCCCGGGAGATGATGACAGGCACAGCTaGCGCCACCTTCCCAATCTCTTCGTCCGTCTGCATGATCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQEELKGPGDDDRHS*RHLPNLFVRLHDLF Trigger: AAAAAGATCATGCAGACGGACGAAGAGATTGGGAAGGTGGCGGCAGCTGTGCCTGTCATCATCTCCCGGGCCCTTGAGCTCTTCCTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025853.16 ENSMUST00000113674.8 ENSMUST00000148219.9 |
||
| CDS CCA 90 bp | AGGTGGGACGTGGTCATGGTTTTGGCATTTCGAGACTGGGTCACCTaGCAAGCCTTCTTCAACAGGGACTCCAGGAAGAGCTCAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RWDVVMVLAFRDWVT*QAFFNRDSRKSSRA Trigger: GGCCCTTGAGCTCTTCCTGGAGTCCCTGTTGAAGAAGGCTTGCCAGGTGACCCAGTCTCGAAATGCCAAAACCATGACCACGTCCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS CCA 90 bp | CACTGCTTCAGGTGGGACGTGGTCATGGTTTTGGCATTTCGAGACTaGGTCACCTGGCAAGCCTTCTTCAACAGGGACTCCAGGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HCFRWDVVMVLAFRD*VTWQAFFNRDSRKS Trigger: GCTCTTCCTGGAGTCCCTGTTGAAGAAGGCTTGCCAGGTGACCCAGTCTCGAAATGCCAAAACCATGACCACGTCCCACCTGAAGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR CAA 90 bp | CAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTAGGAGGGTGACTGGCTaGGGGTGGAAGCTGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QLILTRREHGWGTGAQGARRVTG*GWKLWC Trigger: ACACCACAGCTTCCACCCCAAGCCAGTCACCCTCCT...AGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
||
| CDS CCA 90 bp | GCTCGAGTTCAATGCACTGCTTCAGGTGGGACGTGGTCATGGTTTTaGCATTTCGAGACTGGGTCACCTGGCAAGCCTTCTTCAACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARVQCTASGGTWSWF*HFETGSPGKPSSTG Trigger: CCCTGTTGAAGAAGGCTTGCCAGGTGACCCAGTCTCGAAATGCCAAAACCATGACCACGTCCCACCTGAAGCAGTGCATTGAACTCGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGCCCCTTCGAGGACCCTaGTCCCCATCCACGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSPKQLILTRREHGWGTGPLRGP*SPSTWL Trigger: CAACCACGTGGATGGGGACAAGGGTCCTCGAAGGGG...CCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000136579.3 ENSMUST00000148219.9 |
||
| CDS-3UTR CAA 90 bp | ACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGCTAGGAGTCATAATGACAGCTTCTTGTCTTaGCCTTTGCTTCCCGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRREHGWGTGAQGARSHNDSFLS*PLLPVP Trigger: AGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGTC...ATTATGACTCCTAGCGCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113673.9 ENSMUST00000148219.9 |
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| CDS-3UTR CAA 90 bp | CCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCAGGAGGGTGACTGGCTaGGGGTGGAAGCTGTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: PTFLLSPKQLILTRREHGRRVTG*GWKLWC Trigger: ACACCACAGCTTCCACCCCAAGCCAGTCACCCTCCT...GCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS GCA 90 bp | TGCATGTCAGGCACTGATGCCACCAAGTCTTTCAAGAAGTCAAACTaGTGCTCGAGTTCAATGCACTGCTTCAGGTGGGACGTGGTCATG | + |
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Preference number: 5 (lower is better) Translates to: CMSGTDATKSFKKSN*CSSSMHCFRWDVVM Trigger: CATGACCACGTCCCACCTGAAGCAGTGCATTGAACTCGAGCAGCAGTTTGACTTCTTGAAAGACTTGGTGGCATCAGTGCCTGACATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR CAA 90 bp | AAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGGGGCACAGGGCGACAGCTTCTTGTCTTaGCCTTTGCTTCCCGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: KQLILTRREHGWGTGAQGDSFLS*PLLPVP Trigger: AGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGTC...GCCCTGTGCCCCTGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR CAA 90 bp | TTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTAGGAGGGTGACTGGCTaGGGGTGGAAGCTGTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: FLLSPKQLILTRREHGWGRRVTG*GWKLWC Trigger: ACACCACAGCTTCCACCCCAAGCCAGTCACCCTCCT...ACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS GCA 90 bp | ATGTCAGGCACTGATGCCACCAAGTCTTTCAAGAAGTCAAACTGCTaGTCGAGTTCAATGCACTGCTTCAGGTGGGACGTGGTCATGGTT | + |
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Preference number: 5 (lower is better) Translates to: MSGTDATKSFKKSNC*SSSMHCFRWDVVMV Trigger: AACCATGACCACGTCCCACCTGAAGCAGTGCATTGAACTCGAGCAGCAGTTTGACTTCTTGAAAGACTTGGTGGCATCAGTGCCTGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR CAA 90 bp | CTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTACAGTCTGCATGATCTTTTaGATCCGCGCCGGCGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: LLSPKQLILTRREHGWGTVCMIF*IRAGGN Trigger: GTTTCCGCCGGCGCGGATCAAAAAGATCATGCAGAC...TGTACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025853.16 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS GCA 90 bp | ATGCCACCAAGTCTTTCAAGAAGTCAAACTGCTGCTCGAGTTCAATaGACTGCTTCAGGTGGGACGTGGTCATGGTTTTGGCATTTCGAG | + |
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Preference number: 5 (lower is better) Translates to: MPPSLSRSQTAARVQ*TASGGTWSWFWHFE Trigger: CTCGAAATGCCAAAACCATGACCACGTCCCACCTGAAGCAGTGCATTGAACTCGAGCAGCAGTTTGACTTCTTGAAAGACTTGGTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR CAA 90 bp | TTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGAGCATGGCTGGGGTGACAGCTTCTTGTCTTaGCCTTTGCTTCCCGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLLSPKQLILTRREHGWGDSFLS*PLLPVP Trigger: AGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGTC...ACCCCAGCCATGCTCTCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS-3UTR CAA 90 bp | AAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAAGGAGGGTGACTGGCTaGGGGTGGAAGCTGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KNNPTFLLSPKQLILTRRRRVTG*GWKLWC Trigger: ACACCACAGCTTCCACCCCAAGCCAGTCACCCTCCT...TCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR CAA 90 bp | TTTAAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGGAGGGTGACTGGCTaGGGGTGGAAGCTGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FKNNPTFLLSPKQLILTRRRVTG*GWKLWC Trigger: ACACCACAGCTTCCACCCCAAGCCAGTCACCCTCCT...TCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR CAA 90 bp | AAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGTCTGCATGATCTTTTaGATCCGCGCCGGCGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KNNPTFLLSPKQLILTRRVCMIF*IRAGGN Trigger: GTTTCCGCCGGCGCGGATCAAAAAGATCATGCAGAC...TCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025853.16 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR CAA 90 bp | TTTAAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGACATCTTCGAGGACCCTaGTCCCCATCCACGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FKNNPTFLLSPKQLILTRHLRGP*SPSTWL Trigger: CAACCACGTGGATGGGGACAAGGGTCCTCGAAGATG...TCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113674.8 |
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| CDS-3UTR CAA 90 bp | AAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAAGAGACAGCTTCTTGTCTTaGCCTTTGCTTCCCGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KNNPTFLLSPKQLILTRRDSFLS*PLLPVP Trigger: AGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGTC...TCTTCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR CAA 90 bp | AAATTTAAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTGTCTGCATGATCTTTTaGATCCGCGCCGGCGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KFKNNPTFLLSPKQLILTVCMIF*IRAGGN Trigger: GTTTCCGCCGGCGCGGATCAAAAAGATCATGCAGAC...AGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTTAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025853.16 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS-3UTR CAA 90 bp | TTTAAGAACAATCCCACCTTTCTCCTCTCCCCAAAGCAATTAATACTAACTAGAGACAGCTTCTTGTCTTaGCCTTTGCTTCCCGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FKNNPTFLLSPKQLILTRDSFLS*PLLPVP Trigger: AGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGTC...TCTAGTTAGTATTAATTGCTTTGGGGAGAGGAGAAAGGTGGGATTGTTCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS GCA 72 bp | TGCCTTTGCTTCCCGTGCCTCCGTTCTTCCTGCCGCTaGTGCCCGGTTTCCGGCCCCTTCGAGGACCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: CLCFPCLRSSCR*CPVSGPFEDPC Trigger: ACAAGGGTCCTCGAAGGGGCCGGAAACCGGGCAGCAGCGGCAGGAAGAACGGAGGCACGGGAAGCAAAGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS GCA 72 bp | TGCCTTTGCTTCCCGTGCCTCCGTTCTTCCTGCCGCTaGTGCCCGGTTTCCGGCCCCTTCGGGAAGGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: CLCFPCLRSSCR*CPVSGPFGKVQ Trigger: CTGTACCTTCCCGAAGGGGCCGGAAACCGGGCAGCAGCGGCAGGAAGAACGGAGGCACGGGAAGCAAAGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113674.8 |
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| CDS GCA 72 bp | GAGCTCAAGGGCCCGGGAGATGATGACAGGCACAGCTaGCGCCACCTTCCCAATCTCTTCGTCCGTCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: ELKGPGDDDRHS*RHLPNLFVRLH Trigger: ATGCAGACGGACGAAGAGATTGGGAAGGTGGCGGCAGCTGTGCCTGTCATCATCTCCCGGGCCCTTGAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS CAA 90 bp | TCCTCCTGCTCAGAGTCTGTCCCGGACAGCTTCTTGTCTTTGCCTTaGCTTCCCGTGCCTCCGTTCTTCCTGCCGCTGCTGCCCGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSCSESVPDSFLSLP*LPVPPFFLPLLPGF Trigger: GAAACCGGGCAGCAGCGGCAGGAAGAACGGAGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGTCCGGGACAGACTCTGAGCAGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS CAA 90 bp | GACTCATCCTCCTGCTCAGAGTCTGTCCCGGACAGCTTCTTGTCTTaGCCTTTGCTTCCCGTGCCTCCGTTCTTCCTGCCGCTGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: DSSSCSESVPDSFLS*PLLPVPPFFLPLLP Trigger: GGGCAGCAGCGGCAGGAAGAACGGAGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGTCCGGGACAGACTCTGAGCAGGAGGATGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS GCA 72 bp | ACAGCTGCCGCCACCTTCCCAATCTCTTCGTCCGTCTaGATGATCTTTTTGATCCGCGCCGGCGGAAACCGC | + |
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Preference number: 6 (lower is better) Translates to: TAAATFPISSSV*MIFLIRAGGNR Trigger: GCGGTTTCCGCCGGCGCGGATCAAAAAGATCATGCAGACGGACGAAGAGATTGGGAAGGTGGCGGCAGCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025853.16 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS GCA 72 bp | CAGAGTCTGTCCCGGACAGCTTCTTGTCTTTGCCTTTaGTTCCCGTGCCTCCGTTCTTCCTGCCGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QSLSRTASCLCL*FPCLRSSCRCC Trigger: GCAGCAGCGGCAGGAAGAACGGAGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGTCCGGGACAGACTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS CAA 90 bp | TCCTCAGACTCATCCTCCTGCTCAGAGTCTGTCCCGGACAGCTTCTaGTCTTTGCCTTTGCTTCCCGTGCCTCCGTTCTTCCTGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSDSSSCSESVPDSF*SLPLLPVPPFFLPL Trigger: CAGCGGCAGGAAGAACGGAGGCACGGGAAGCAAAGGCAAAGACAAGAAGCTGTCCGGGACAGACTCTGAGCAGGAGGATGAGTCTGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS CAA 90 bp | GAAGGGAGTTGGAGGGCTCTGAAAGTGGGCAGGAGGGTGACTGGCTaGGGGTGGAAGCTGTGGTGTCTCTTCTTCCCCATCAGTATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: EGSWRALKVGRRVTG*GWKLWCLFFPISIC Trigger: ACAGATACTGATGGGGAAGAAGAGACACCACAGCTTCCACCCCAAGCCAGTCACCCTCCTGCCCACTTTCAGAGCCCTCCAACTCCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025853.16 ENSMUST00000113674.8 ENSMUST00000136579.3 |
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| CDS CCA 72 bp | AGGTGGGACGTGGTCATGGTTTTGGCATTTCGAGACTaGGTCACCTGGCAAGCCTTCTTCAACAGGGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: RWDVVMVLAFRD*VTWQAFFNRDS Trigger: GGAGTCCCTGTTGAAGAAGGCTTGCCAGGTGACCCAGTCTCGAAATGCCAAAACCATGACCACGTCCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS CCA 72 bp | GTGGTCATGGTTTTGGCATTTCGAGACTGGGTCACCTaGCAAGCCTTCTTCAACAGGGACTCCAGGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VVMVLAFRDWVT*QAFFNRDSRKS Trigger: GCTCTTCCTGGAGTCCCTGTTGAAGAAGGCTTGCCAGGTGACCCAGTCTCGAAATGCCAAAACCATGACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS CCA 72 bp | CAATGCACTGCTTCAGGTGGGACGTGGTCATGGTTTTaGCATTTCGAGACTGGGTCACCTGGCAAGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QCTASGGTWSWF*HFETGSPGKPS Trigger: AGAAGGCTTGCCAGGTGACCCAGTCTCGAAATGCCAAAACCATGACCACGTCCCACCTGAAGCAGTGCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS CCA 72 bp | CGAGTTCAATGCACTGCTTCAGGTGGGACGTGGTCATaGTTTTGGCATTTCGAGACTGGGTCACCTGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RVQCTASGGTWS*FWHFETGSPGK Trigger: CTTGCCAGGTGACCCAGTCTCGAAATGCCAAAACCATGACCACGTCCCACCTGAAGCAGTGCATTGAACTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS CCA 72 bp | GCTGCTCGAGTTCAATGCACTGCTTCAGGTGGGACGTaGTCATGGTTTTGGCATTTCGAGACTGGGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: AARVQCTASGGT*SWFWHFETGSP Trigger: AGGTGACCCAGTCTCGAAATGCCAAAACCATGACCACGTCCCACCTGAAGCAGTGCATTGAACTCGAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS CAA 72 bp | ACCTTCCCAATCTCTTCGTCCGTCTGCATGATCTTTTaGATCCGCGCCGGCGGAAACCGCGCGTTATACTTC | + |
|
Preference number: 6 (lower is better) Translates to: TFPISSSVCMIF*IRAGGNRALYF Trigger: GAAGTATAACGCGCGGTTTCCGCCGGCGCGGATCAAAAAGATCATGCAGACGGACGAAGAGATTGGGAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025853.16 ENSMUST00000113674.8 ENSMUST00000148219.9 |
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| CDS CAA 72 bp | TCAATGCACTGCTTCAGGTGGGACGTGGTCATGGTTTaGGCATTTCGAGACTGGGTCACCTGGCAAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SMHCFRWDVVMV*AFRDWVTWQAF Trigger: GAAGGCTTGCCAGGTGACCCAGTCTCGAAATGCCAAAACCATGACCACGTCCCACCTGAAGCAGTGCATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS CAA 90 bp | TGCTCGAGTTCAATGCACTGCTTCAGGTGGGACGTGGTCATGGTTTaGGCATTTCGAGACTGGGTCACCTGGCAAGCCTTCTTCAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: CSSSMHCFRWDVVMV*AFRDWVTWQAFFNR Trigger: CCTGTTGAAGAAGGCTTGCCAGGTGACCCAGTCTCGAAATGCCAAAACCATGACCACGTCCCACCTGAAGCAGTGCATTGAACTCGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS GCA 72 bp | GGCACTGATGCCACCAAGTCTTTCAAGAAGTCAAACTaGTGCTCGAGTTCAATGCACTGCTTCAGGTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GTDATKSFKKSN*CSSSMHCFRWD Trigger: GTCCCACCTGAAGCAGTGCATTGAACTCGAGCAGCAGTTTGACTTCTTGAAAGACTTGGTGGCATCAGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS GCA 72 bp | ACTGATGCCACCAAGTCTTTCAAGAAGTCAAACTGCTaGTCGAGTTCAATGCACTGCTTCAGGTGGGACGTG | + |
|
Preference number: 6 (lower is better) Translates to: TDATKSFKKSNC*SSSMHCFRWDV Trigger: CACGTCCCACCTGAAGCAGTGCATTGAACTCGAGCAGCAGTTTGACTTCTTGAAAGACTTGGTGGCATCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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| CDS GCA 72 bp | AGTCTTTCAAGAAGTCAAACTGCTGCTCGAGTTCAATaGACTGCTTCAGGTGGGACGTGGTCATGGTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSRSQTAARVQ*TASGGTWSWFW Trigger: CCAAAACCATGACCACGTCCCACCTGAAGCAGTGCATTGAACTCGAGCAGCAGTTTGACTTCTTGAAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025853.16 ENSMUST00000113673.9 ENSMUST00000113674.8 ENSMUST00000136579.3 ENSMUST00000148219.9 |
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