Pregenerated sensors for DRAM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020057Ensembl transcript IDs: ENSMUST00000020249.2, ENSMUST00000156097.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GTGTACACCACCCCGCAGACGAAAGCCAGAAGCGCACCGCCATCATaGACCACAGGCACGGCTAACTCCTGGAAGTTGGCTACGATGCCC | + |
Preference number: 1 (lower is better) Translates to: VYTTPQTKARSAPPS*TTGTANSWKLATMP Trigger: GGGCATCGTAGCCAACTTCCAGGAGTTAGCCGTGCCTGTGGTCCATGATGGCGGTGCGCTTCTGGCTTTCGTCTGCGGGGTGGTGTACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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3UTR CCA 90 bp | GCCAGAAGCGCACCGCCATCATGGACCACAGGCACGGCTAACTCCTaGAAGTTGGCTACGATGCCCATTCCGATGCATCCCACCAATCCA | + |
Preference number: 1 (lower is better) Translates to: ARSAPPSWTTGTANS*KLATMPIPMHPTNP Trigger: TGGATTGGTGGGATGCATCGGAATGGGCATCGTAGCCAACTTCCAGGAGTTAGCCGTGCCTGTGGTCCATGATGGCGGTGCGCTTCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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3UTR CCA 90 bp | TGTGCCCCTTCATCGCCAGGTACCCTTTCACTAAGGCTGTCCAAATaGTCTCTGTCCTTGGAACGTGCCCTTGGGGCAGCTCCTACTGGC | + |
Preference number: 1 (lower is better) Translates to: CAPSSPGTLSLRLSK*SLSLERALGAAPTG Trigger: GCCAGTAGGAGCTGCCCCAAGGGCACGTTCCAAGGACAGAGACCATTTGGACAGCCTTAGTGAAAGGGTACCTGGCGATGAAGGGGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR TCA 90 bp | GAAATTCAAGTCCCGGATGTGCCACAGATAAAGTCCCCATCAGGGTaGCATCCAAGCCCGTCCGTCCTCTGTCCACTTCCAGAAACTGTC | + |
Preference number: 1 (lower is better) Translates to: EIQVPDVPQIKSPSG*HPSPSVLCPLPETV Trigger: GACAGTTTCTGGAAGTGGACAGAGGACGGACGGGCTTGGATGTCACCCTGATGGGGACTTTATCTGTGGCACATCCGGGACTTGAATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR GCA 90 bp | TGGGAAGGCATCAACCAAGGCTCCCGCTCAAAGCAAAGAACAGCATaGATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCCT | + |
Preference number: 1 (lower is better) Translates to: WEGINQGSRSKQRTA*IQSAPASTGNVSTP Trigger: AGGAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTTGCTTTGAGCGGGAGCCTTGGTTGATGCCTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR GCA 90 bp | ACTTCTTCCTCCACAACAGCTGGCGTTTCTTTGCCATTGGTGAACTaGATGAAAGGTAGAGTCTCCAGGCCTTGCTTCGGAAAGGGCCTG | + |
Preference number: 1 (lower is better) Translates to: TSSSTTAGVSLPLVN*MKGRVSRPCFGKGL Trigger: CAGGCCCTTTCCGAAGCAAGGCCTGGAGACTCTACCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGAGGAAGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR CCA 90 bp | TTTATTAAGCACCTATTGCATGCCACAAGGCACTGTGTTCCACTATaGGTAAAGGCACGTGGTCGGGTCTCCAGTGGAAGCGAAGAGAGC | + |
Preference number: 1 (lower is better) Translates to: FIKHLLHATRHCVPL*VKARGRVSSGSEES Trigger: GCTCTCTTCGCTTCCACTGGAGACCCGACCACGTGCCTTTACCCATAGTGGAACACAGTGCCTTGTGGCATGCAATAGGTGCTTAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR CCA 90 bp | ACAGGGATAAAACTAGAAGTCGCATGGAATCTGCAGAGTGTGATTTaGGGGCCTCCTCGGTTTGCCAAGACAGGTTTAGCCCATGTAACA | + |
Preference number: 1 (lower is better) Translates to: TGIKLEVAWNLQSVI*GPPRFAKTGLAHVT Trigger: TGTTACATGGGCTAAACCTGTCTTGGCAAACCGAGGAGGCCCCCAAATCACACTCTGCAGATTCCATGCGACTTCTAGTTTTATCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR GCA 90 bp | TCTCTTTGGCTTACAGGGAAACTGAGAAGTGAATTGAACTTGTGCTaGCCGGTCACAGAGAAGGGCAGTTTGATCATTTCTAAGCTGGCC | + |
Preference number: 1 (lower is better) Translates to: SLWLTGKLRSELNLC*PVTEKGSLIISKLA Trigger: GGCCAGCTTAGAAATGATCAAACTGCCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAGCCAAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR CCA 90 bp | ATGTTCGGTACTGTGAAAAGTTACAGGGGACTCAGAAATGGACGTTaGTTGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCAT | + |
Preference number: 1 (lower is better) Translates to: MFGTVKSYRGLRNGR*LPPLHTEEEDTGCH Trigger: ATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGTCCCCTGTAACTTTTCACAGTACCGAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR TCA 90 bp | CAGCTTCCACAGGAAATGTATCGACTCCTCTCTCACTCATCAGAATaGCAGCCACTGTCTTTCTGTTCCAGTGTTACAATGGGCATGTTC | + |
Preference number: 1 (lower is better) Translates to: QLPQEMYRLLSHSSE*QPLSFCSSVTMGMF Trigger: GAACATGCCCATTGTAACACTGGAACAGAAAGACAGTGGCTGTCATTCTGATGAGTGAGAGAGGAGTCGATACATTTCCTGTGGAAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR TCA 90 bp | CCGTCCTCTGTCCACTTCCAGAAACTGTCTGCGACACTCCCTGAATaGGACAGGATTCTCGATCTTTCAAAAGTCGTCATTGATTTCTGT | + |
Preference number: 1 (lower is better) Translates to: PSSVHFQKLSATLPE*DRILDLSKVVIDFC Trigger: ACAGAAATCAATGACGACTTTTGAAAGATCGAGAATCCTGTCTCATTCAGGGAGTGTCGCAGACAGTTTCTGGAAGTGGACAGAGGACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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3UTR CCA 90 bp | AAGAAATGCAGAGAAGTTTATCATGAATCCAAAAATACCACTCTCTaGAGGAGTTGTTCCTGTGTCACTGGTCCCTCCCTCACGCTCCTC | + |
Preference number: 1 (lower is better) Translates to: KKCREVYHESKNTTL*RSCSCVTGPSLTLL Trigger: GAGGAGCGTGAGGGAGGGACCAGTGACACAGGAACAACTCCTCCAGAGAGTGGTATTTTTGGATTCATGATAAACTTCTCTGCATTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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3UTR GCA 90 bp | CATTCTCTTTGGCTTACAGGGAAACTGAGAAGTGAATTGAACTTGTaGTGCCCGGTCACAGAGAAGGGCAGTTTGATCATTTCTAAGCTG | + |
Preference number: 1 (lower is better) Translates to: HSLWLTGKLRSELNL*CPVTEKGSLIISKL Trigger: CAGCTTAGAAATGATCAAACTGCCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAGCCAAAGAGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR CAA 90 bp | TCGCCAGGTACCCTTTCACTAAGGCTGTCCAAATGGTCTCTGTCCTaGGAACGTGCCCTTGGGGCAGCTCCTACTGGCCCAGACTGGGGG | + |
Preference number: 2 (lower is better) Translates to: SPGTLSLRLSKWSLS*ERALGAAPTGPDWG Trigger: CCCCCAGTCTGGGCCAGTAGGAGCTGCCCCAAGGGCACGTTCCAAGGACAGAGACCATTTGGACAGCCTTAGTGAAAGGGTACCTGGCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR TCA 90 bp | GCTGTCCAAATGGTCTCTGTCCTTGGAACGTGCCCTTGGGGCAGCTCCTACTGGGCGACACTCCCTGAATaGGACAGGATTCTCGATCTT | + |
Preference number: 2 (lower is better) Translates to: AVQMVSVLGTCPWGSSYWATLPE*DRILDL Trigger: AAGATCGAGAATCCTGTCTCATTCAGGGAGTGTCGC...CCAGTAGGAGCTGCCCCAAGGGCACGTTCCAAGGACAGAGACCATTTGGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR GCA 90 bp | CGTTGGTTGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCATGGCAGATCTGTCCTTGGAACGTaGCCTTGGGGCAGCTCCTAC | + |
Preference number: 2 (lower is better) Translates to: RWLPPLHTEEEDTGCHGRSVLGT*PWGSSY Trigger: GTAGGAGCTGCCCCAAGGGCACGTTCCAAGGACAGA...TCTGCCATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR CCA 90 bp | AGCTGTGGGTCCCTTGGAGAAGTAAATGAGGGGGCTAAATTTTCGAACCGAGGTCTTGGAACGTGCCCTTaGGGCAGCTCCTACTGGCCC | + |
Preference number: 2 (lower is better) Translates to: SCGSLGEVNEGAKFSNRGLGTCP*GSSYWP Trigger: GGGCCAGTAGGAGCTGCCCCAAGGGCACGTTCCAAG...ACCTCGGTTCGAAAATTTAGCCCCCTCATTTACTTCTCCAAGGGACCCACAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR TCA 90 bp | GCAAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACGTCTGCGACACTCCCTaGATGAGACAGGATTCTCGA | + |
Preference number: 2 (lower is better) Translates to: AKNSMHSVRPSFHRKCIDVCDTP*MRQDSR Trigger: TCGAGAATCCTGTCTCATTCAGGGAGTGTCGCAGAC...GTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR TCA 90 bp | AAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCGCCACCACTGCACACTaGGGAAGAAGACACAGGATG | + |
Preference number: 2 (lower is better) Translates to: KEQHAFSPPQLPQEMYRLATTAH*GRRHRM Trigger: CATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGC...GAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR GCA 90 bp | TTCTGTGCTATCTGTCCAGGAGAGAGTTGTCACACAATCATGAAGCTCACACAGGGAGGCACTGCTGTGTaGCCCTTCATCGCCAGGTAC | + |
Preference number: 2 (lower is better) Translates to: FCAICPGESCHTIMKLTQGGTAV*PFIARY Trigger: GTACCTGGCGATGAAGGGGCACACAGCAGTGCCTCC...CTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCCTGGACAGATAGCACAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR GCA 90 bp | GCCACAAGGCACTGTGTTCCACTATGGGTAAAGGCACGTGGTCGGGTCTCCAGTTGTGTACATCGTAGCTaGGCCAAGAAATGCAGAGAA | + |
Preference number: 2 (lower is better) Translates to: ATRHCVPLWVKARGRVSSCVHRS*AKKCRE Trigger: TTCTCTGCATTTCTTGGCGCAGCTACGATGTACACA...ACTGGAGACCCGACCACGTGCCTTTACCCATAGTGGAACACAGTGCCTTGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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3UTR-3UTR CCA 90 bp | AAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCAATGGTCTCTGTCCTTaGAACGTGCCCTTGGGGCAG | + |
Preference number: 2 (lower is better) Translates to: KEQHAFSPPQLPQEMYRLNGLCP*NVPLGQ Trigger: CTGCCCCAAGGGCACGTTCCAAGGACAGAGACCATT...GAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR CAA 90 bp | GGGGTCTTGTTATCCACTTCTTCCTCCACAACAGCTGGCGTTTCTTaGCCATTGGTGAACTGCATGAAAGGTAGAGTCTCCAGGCCTTGC | + |
Preference number: 2 (lower is better) Translates to: GVLLSTSSSTTAGVS*PLVNCMKGRVSRPC Trigger: GCAAGGCCTGGAGACTCTACCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGAGGAAGAAGTGGATAACAAGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR TCA 90 bp | AATGGACGTTGGTTGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCATGTCTGCGACACTCCCTaGATGAGACAGGATTCTCGA | + |
Preference number: 2 (lower is better) Translates to: NGRWLPPLHTEEEDTGCHVCDTP*MRQDSR Trigger: TCGAGAATCCTGTCTCATTCAGGGAGTGTCGCAGAC...ATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR TCA 90 bp | CGTTGGTTGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCATGGCAGAAGGGAAACTGAGAAGTaGATTGAACTTGTGCTGCCC | + |
Preference number: 2 (lower is better) Translates to: RWLPPLHTEEEDTGCHGRRETEK*IELVLP Trigger: GGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCT...TCTGCCATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR TCA 90 bp | ACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCCTCTCATCTGGAAGTTTCTATaGGCGCTCTCCTTTCTCCCT | + |
Preference number: 2 (lower is better) Translates to: TACIQSAPASTGNVSTPLIWKFL*ALSFLP Trigger: AGGGAGAAAGGAGAGCGCTCATAGAAACTTCCAGAT...GAGAGGAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR GCA 90 bp | GCAAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACGTTGGTTGCCACCACTaGACACTGAGGAAGAAGACA | + |
Preference number: 2 (lower is better) Translates to: AKNSMHSVRPSFHRKCIDVGCHH*TLRKKT Trigger: TGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAAC...GTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR CCA 90 bp | AGCTGTGGGTCCCTTGGAGAAGTAAATGAGGGGGCTAAATTTTCGAACCGAGGTCGGTCCACTCACAGATaGCGCTCACCACGTGATATA | + |
Preference number: 2 (lower is better) Translates to: SCGSLGEVNEGAKFSNRGRSTHR*RSPRDI Trigger: TATATCACGTGGTGAGCGCCATCTGTGAGTGGACCG...ACCTCGGTTCGAAAATTTAGCCCCCTCATTTACTTCTCCAAGGGACCCACAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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3UTR CAA 90 bp | TTCGGTACTGTGAAAAGTTACAGGGGACTCAGAAATGGACGTTGGTaGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCATGGC | + |
Preference number: 2 (lower is better) Translates to: FGTVKSYRGLRNGRW*PPLHTEEEDTGCHG Trigger: GCCATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGTCCCCTGTAACTTTTCACAGTACCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR TCA 90 bp | AAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCGCTCTCCTTTCTCCCTaGCTTGGATCTGCATTCTCT | + |
Preference number: 2 (lower is better) Translates to: KEQHAFSPPQLPQEMYRLALLSP*LGSAFS Trigger: AGAGAATGCAGATCCAAGTCAGGGAGAAAGGAGAGC...GAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR TCA 90 bp | TGTATCGACTCCTCTCTCACTCATCAGAATGACAGCCACTGTCTTTCTGTTCCAGCCACCACTGCACACTaGGGAAGAAGACACAGGATG | + |
Preference number: 2 (lower is better) Translates to: CIDSSLTHQNDSHCLSVPATTAH*GRRHRM Trigger: CATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGC...TGGAACAGAAAGACAGTGGCTGTCATTCTGATGAGTGAGAGAGGAGTCGATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR GCA 90 bp | TGTGAAAAGTTACAGGGGACTCAGAAATGGACGTTGGTTGCCACCACTGCACACCTACAGTGTCGTTGGTaGTATCCATCCTCCAGGGAA | + |
Preference number: 2 (lower is better) Translates to: CEKLQGTQKWTLVATTAHLQCRW*YPSSRE Trigger: TTCCCTGGAGGATGGATAGCACCAACGACACTGTAG...GTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGTCCCCTGTAACTTTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR GCA 90 bp | GAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGAATGTCATGGCAGAAGTaGCTGCTGAGCAGCACCCTT | + |
Preference number: 2 (lower is better) Translates to: ESCHTIMKLTQLEQVETRMSWQK*LLSSTL Trigger: AAGGGTGCTGCTCAGCAGGCACTTCTGCCATGACAT...TCTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR GCA 90 bp | TTCTGTGCTATCTGTCCAGGAGAGAGTTGTCACACAATCATGAAGCTCACACAGCGATGCCCATTCCGATaGATCCCACCAATCCAAGCG | + |
Preference number: 2 (lower is better) Translates to: FCAICPGESCHTIMKLTQRCPFR*IPPIQA Trigger: CGCTTGGATTGGTGGGATGCATCGGAATGGGCATCG...CTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCCTGGACAGATAGCACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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3UTR-3UTR CCA 90 bp | GAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGAGAGCCAAGTGCATTCTaGGAAGGCATCAACCAAGGC | + |
Preference number: 2 (lower is better) Translates to: ESCHTIMKLTQLEQVETREPSAF*EGINQG Trigger: GCCTTGGTTGATGCCTTCCCAGAATGCACTTGGCTC...TCTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR CAA 90 bp | TTGTTATCCACTTCTTCCTCCACAACAGCTGGCGTTTCTTTGCCATaGGTGAACTGCATGAAAGGTAGAGTCTCCAGGCCTTGCTTCGGA | + |
Preference number: 2 (lower is better) Translates to: LLSTSSSTTAGVSLP*VNCMKGRVSRPCFG Trigger: TCCGAAGCAAGGCCTGGAGACTCTACCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGAGGAAGAAGTGGATAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR CAA 90 bp | AACAGGGATAAAACTAGAAGTCGCATGGAATCTGCAGAGTGTGATTaGGGGGCCTCCTCGGTTTGCCAAGACAGGTTTAGCCCATGTAAC | + |
Preference number: 2 (lower is better) Translates to: NRDKTRSRMESAECD*GASSVCQDRFSPCN Trigger: GTTACATGGGCTAAACCTGTCTTGGCAAACCGAGGAGGCCCCCAAATCACACTCTGCAGATTCCATGCGACTTCTAGTTTTATCCCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR GCA 90 bp | GCCTCCTCGGTTTGCCAAGACAGGTTTAGCCCATGTAACAATTTCTGTGCTATCCTACAGTGTCGTTGGTaGTATCCATCCTCCAGGGAA | + |
Preference number: 2 (lower is better) Translates to: ASSVCQDRFSPCNNFCAILQCRW*YPSSRE Trigger: TTCCCTGGAGGATGGATAGCACCAACGACACTGTAG...GATAGCACAGAAATTGTTACATGGGCTAAACCTGTCTTGGCAAACCGAGGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR GCA 90 bp | GGCCCACAGGCATTGATAGGAGCAGATAAACAGCAGCCCACATCTGGAAGTTTCTTGCCATTGGTGAACTaGATGAAAGGTAGAGTCTCC | + |
Preference number: 2 (lower is better) Translates to: GPQALIGADKQQPTSGSFLPLVN*MKGRVS Trigger: GGAGACTCTACCTTTCATGCAGTTCACCAATGGCAA...GAAACTTCCAGATGTGGGCTGCTGTTTATCTGCTCCTATCAATGCCTGTGGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR GCA 90 bp | TTCTTCCTCCACAACAGCTGGCGTTTCTTTGCCATTGGTGAACTGCATGAAAGGGCGAAGAGAGCCAAGTaGATTCTGGGAAGGCATCAA | + |
Preference number: 2 (lower is better) Translates to: FFLHNSWRFFAIGELHERAKRAK*ILGRHQ Trigger: TTGATGCCTTCCCAGAATGCACTTGGCTCTCTTCGC...CCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGAGGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR CCA 90 bp | AGAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGGCGGCAGTAAAGCTGTaGGTCCCTTGGAGAAGTAAA | + |
Preference number: 2 (lower is better) Translates to: RELSHNHEAHTAGTGGNEAAVKL*VPWRSK Trigger: TTTACTTCTCCAAGGGACCCACAGCTTTACTGCCGC...CTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR CCA 90 bp | GCCTCCTCGGTTTGCCAAGACAGGTTTAGCCCATGTAACAATTTCTGTGCTATCCCTTTCTCCCTGACTTaGATCTGCATTCTCTTTGGC | + |
Preference number: 2 (lower is better) Translates to: ASSVCQDRFSPCNNFCAIPFSLT*ICILFG Trigger: GCCAAAGAGAATGCAGATCCAAGTCAGGGAGAAAGG...GATAGCACAGAAATTGTTACATGGGCTAAACCTGTCTTGGCAAACCGAGGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR TCA 90 bp | GAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGAGGTTATAGAAATGAGTaGAGCACAGGCAATCATGGG | + |
Preference number: 2 (lower is better) Translates to: ESCHTIMKLTQLEQVETRGYRNE*STGNHG Trigger: CCCATGATTGCCTGTGCTTCACTCATTTCTATAACC...TCTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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3UTR CAA 90 bp | CTGCATTCTCTTTGGCTTACAGGGAAACTGAGAAGTGAATTGAACTaGTGCTGCCCGGTCACAGAGAAGGGCAGTTTGATCATTTCTAAG | + |
Preference number: 2 (lower is better) Translates to: LHSLWLTGKLRSELN*CCPVTEKGSLIISK Trigger: CTTAGAAATGATCAAACTGCCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAGCCAAAGAGAATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
||
3UTR-3UTR GCA 90 bp | GAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGATTATTAAGCACCTATTaGATGCCACAAGGCACTGTG | + |
Preference number: 2 (lower is better) Translates to: ESCHTIMKLTQLEQVETRLLSTY*MPQGTV Trigger: CACAGTGCCTTGTGGCATGCAATAGGTGCTTAATAA...TCTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
||
3UTR-3UTR CCA 90 bp | GTTACAATGGGCATGTTCGGTACTGTGAAAAGTTACAGGGGACTCAGAAATGGACTAAGGCTGTCCAAATaGTCTCTGTCCTTGGAACGT | + |
Preference number: 2 (lower is better) Translates to: VTMGMFGTVKSYRGLRNGLRLSK*SLSLER Trigger: ACGTTCCAAGGACAGAGACCATTTGGACAGCCTTAG...TCCATTTCTGAGTCCCCTGTAACTTTTCACAGTACCGAACATGCCCATTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
||
3UTR-3UTR CCA 90 bp | AACGAGAATAGTTCACAAAGCAAAACAGACAACATTACTAATTGGCACAGACTACTGCAGAGTGTGATTTaGGGGCCTCCTCGGTTTGCC | + |
Preference number: 2 (lower is better) Translates to: NENSSQSKTDNITNWHRLLQSVI*GPPRFA Trigger: GGCAAACCGAGGAGGCCCCCAAATCACACTCTGCAG...TAGTCTGTGCCAATTAGTAATGTTGTCTGTTTTGCTTTGTGAACTATTCTCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
||
3UTR CAA 90 bp | CACTCCCTGAATGAGACAGGATTCTCGATCTTTCAAAAGTCGTCATaGATTTCTGTGGATATCCTTAGAGTGACACTCTGGAAATCTTGG | + |
Preference number: 2 (lower is better) Translates to: HSLNETGFSIFQKSS*ISVDILRVTLWKSW Trigger: CCAAGATTTCCAGAGTGTCACTCTAAGGATATCCACAGAAATCAATGACGACTTTTGAAAGATCGAGAATCCTGTCTCATTCAGGGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
||
3UTR-3UTR TCA 90 bp | CACATTCGCTGGTTAATGTGCACTGTAAATGGTTTTGAGTCCTTCACTATAAAAGCGACACTCCCTGAATaGGACAGGATTCTCGATCTT | + |
Preference number: 2 (lower is better) Translates to: HIRWLMCTVNGFESFTIKATLPE*DRILDL Trigger: AAGATCGAGAATCCTGTCTCATTCAGGGAGTGTCGC...TTTTATAGTGAAGGACTCAAAACCATTTACAGTGCACATTAACCAGCGAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
||
3UTR-3UTR CCA 90 bp | GAACAGGTGGAAACGAGAATAGTTCACAAAGCAAAACAGACAACATTACTAATTCTTAGAGTGACACTCTaGAAATCTTGGATGAATGTT | + |
Preference number: 2 (lower is better) Translates to: EQVETRIVHKAKQTTLLILRVTL*KSWMNV Trigger: AACATTCATCCAAGATTTCCAGAGTGTCACTCTAAG...AATTAGTAATGTTGTCTGTTTTGCTTTGTGAACTATTCTCGTTTCCACCTGTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
||
3UTR CCA 72 bp | GCACCGCCATCATGGACCACAGGCACGGCTAACTCCTaGAAGTTGGCTACGATGCCCATTCCGATGCATCCC | + |
Preference number: 3 (lower is better) Translates to: APPSWTTGTANS*KLATMPIPMHP Trigger: GGGATGCATCGGAATGGGCATCGTAGCCAACTTCCAGGAGTTAGCCGTGCCTGTGGTCCATGATGGCGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
||
3UTR CCA 72 bp | GCTGCGCACGAAACAGCGGAGATGGCCATCCTGACATaGCACGTGGTGAGACTGTTCCACTGGGGACAGGAT | + |
Preference number: 3 (lower is better) Translates to: AAHETAEMAILT*HVVRLFHWGQD Trigger: ATCCTGTCCCCAGTGGAACAGTCTCACCACGTGCCATGTCAGGATGGCCATCTCCGCTGTTTCGTGCGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
||
3UTR TCA 72 bp | GTCCCGGATGTGCCACAGATAAAGTCCCCATCAGGGTaGCATCCAAGCCCGTCCGTCCTCTGTCCACTTCCA | + |
Preference number: 3 (lower is better) Translates to: VPDVPQIKSPSG*HPSPSVLCPLP Trigger: TGGAAGTGGACAGAGGACGGACGGGCTTGGATGTCACCCTGATGGGGACTTTATCTGTGGCACATCCGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
||
3UTR CCA 72 bp | GGTCTCCAGTGGAAGCGAAGAGAGCCAAGTGCATTCTaGGAAGGCATCAACCAAGGCTCCCGCTCAAAGCAA | + |
Preference number: 3 (lower is better) Translates to: GLQWKRREPSAF*EGINQGSRSKQ Trigger: TTGCTTTGAGCGGGAGCCTTGGTTGATGCCTTCCCAGAATGCACTTGGCTCTCTTCGCTTCCACTGGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
||
3UTR CCA 72 bp | CACAAGGCACTGTGTTCCACTATGGGTAAAGGCACGTaGTCGGGTCTCCAGTGGAAGCGAAGAGAGCCAAGT | + |
Preference number: 3 (lower is better) Translates to: HKALCSTMGKGT*SGLQWKRREPS Trigger: ACTTGGCTCTCTTCGCTTCCACTGGAGACCCGACCACGTGCCTTTACCCATAGTGGAACACAGTGCCTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
||
3UTR-3UTR CAA 90 bp | ACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCCTCTCCACTCTCTGGAGGAGTaGTTCCTGTGTCACTGGTCC | + |
Preference number: 3 (lower is better) Translates to: TACIQSAPASTGNVSTPLHSLEE*FLCHWS Trigger: GGACCAGTGACACAGGAACAACTCCTCCAGAGAGTG...GAGAGGAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
||
3UTR GCA 72 bp | ACAGGGGACTCAGAAATGGACGTTGGTTGCCACCACTaGACACTGAGGAAGAAGACACAGGATGTCATGGCA | + |
Preference number: 3 (lower is better) Translates to: TGDSEMDVGCHH*TLRKKTQDVMA Trigger: TGCCATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGTCCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR CAA 90 bp | AATGGACGTTGGTTGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCATAAATGGTCTCTGTCCTaGGAACGTGCCCTTGGGGCA | + |
Preference number: 3 (lower is better) Translates to: NGRWLPPLHTEEEDTGCHKWSLS*ERALGA Trigger: TGCCCCAAGGGCACGTTCCAAGGACAGAGACCATTT...ATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR TCA 72 bp | ACTCAGAAATGGACGTTGGTTGCCACCACTGCACACTaGGGAAGAAGACACAGGATGTCATGGCAGAAGTGC | + |
Preference number: 3 (lower is better) Translates to: TQKWTLVATTAH*GRRHRMSWQKC Trigger: GCACTTCTGCCATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR GCA 72 bp | TCCACAACAGCTGGCGTTTCTTTGCCATTGGTGAACTaGATGAAAGGTAGAGTCTCCAGGCCTTGCTTCGGA | + |
Preference number: 3 (lower is better) Translates to: STTAGVSLPLVN*MKGRVSRPCFG Trigger: TCCGAAGCAAGGCCTGGAGACTCTACCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR GCA 72 bp | ATCAACCAAGGCTCCCGCTCAAAGCAAAGAACAGCATaGATTCAGTCCGCCCCAGCTTCCACAGGAAATGTA | + |
Preference number: 3 (lower is better) Translates to: INQGSRSKQRTA*IQSAPASTGNV Trigger: TACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTTGCTTTGAGCGGGAGCCTTGGTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR CCA 72 bp | AAACTAGAAGTCGCATGGAATCTGCAGAGTGTGATTTaGGGGCCTCCTCGGTTTGCCAAGACAGGTTTAGCC | + |
Preference number: 3 (lower is better) Translates to: KLEVAWNLQSVI*GPPRFAKTGLA Trigger: GGCTAAACCTGTCTTGGCAAACCGAGGAGGCCCCCAAATCACACTCTGCAGATTCCATGCGACTTCTAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR CAA 90 bp | TTCTGTGCTATCTGTCCAGGAGAGAGTTGTCACACAATCATGAAGCTCACACAGAAATGGTCTCTGTCCTaGGAACGTGCCCTTGGGGCA | + |
Preference number: 3 (lower is better) Translates to: FCAICPGESCHTIMKLTQKWSLS*ERALGA Trigger: TGCCCCAAGGGCACGTTCCAAGGACAGAGACCATTT...CTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCCTGGACAGATAGCACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR CAA 90 bp | GAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGAACAGCTGGCGTTTCTTaGCCATTGGTGAACTGCATG | + |
Preference number: 3 (lower is better) Translates to: ESCHTIMKLTQLEQVETRTAGVS*PLVNCM Trigger: CATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGT...TCTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR CAA 90 bp | TTCTGTGCTATCTGTCCAGGAGAGAGTTGTCACACAATCATGAAGCTCACACAGGTAGGAGATGATCGATaGCAGGAGCGTGTACACCAC | + |
Preference number: 3 (lower is better) Translates to: FCAICPGESCHTIMKLTQVGDDR*QERVHH Trigger: GTGGTGTACACGCTCCTGCAATCGATCATCTCCTAC...CTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCCTGGACAGATAGCACAGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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3UTR TCA 72 bp | TCTGCATTCTCTTTGGCTTACAGGGAAACTGAGAAGTaGATTGAACTTGTGCTGCCCGGTCACAGAGAAGGG | + |
Preference number: 3 (lower is better) Translates to: SAFSLAYRETEK*IELVLPGHREG Trigger: CCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAGCCAAAGAGAATGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR GCA 72 bp | GAATCTGCAGAGTGTGATTTGGGGGCCTCCTCGGTTTaGCAAGACAGGTTTAGCCCATGTAACAATTTCTGT | + |
Preference number: 3 (lower is better) Translates to: ESAECDLGASSV*QDRFSPCNNFC Trigger: ACAGAAATTGTTACATGGGCTAAACCTGTCTTGGCAAACCGAGGAGGCCCCCAAATCACACTCTGCAGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
||
3UTR CCA 72 bp | ACTGTGAAAAGTTACAGGGGACTCAGAAATGGACGTTaGTTGCCACCACTGCACACTGAGGAAGAAGACACA | + |
Preference number: 3 (lower is better) Translates to: TVKSYRGLRNGR*LPPLHTEEEDT Trigger: TGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGTCCCCTGTAACTTTTCACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR CAA 90 bp | GCAAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTTTATTAAGCACCTATaGCATGCCACAAGGCACTGT | + |
Preference number: 3 (lower is better) Translates to: AKNSMHSVRPSFHRKCIDFIKHL*HATRHC Trigger: ACAGTGCCTTGTGGCATGCAATAGGTGCTTAATAAA...GTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR CAA 90 bp | GGTTGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCATGGCAGAAGTGGGATTCCATTCCAGCTaGGTTATAGAAATGAGTGAA | + |
Preference number: 3 (lower is better) Translates to: GCHHCTLRKKTQDVMAEVGFHSS*VIEMSE Trigger: TTCACTCATTTCTATAACCAAGCTGGAATGGAATCC...CACTTCTGCCATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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3UTR TCA 72 bp | CTCTGTCCACTTCCAGAAACTGTCTGCGACACTCCCTaGATGAGACAGGATTCTCGATCTTTCAAAAGTCGT | + |
Preference number: 3 (lower is better) Translates to: LCPLPETVCDTP*MRQDSRSFKSR Trigger: ACGACTTTTGAAAGATCGAGAATCCTGTCTCATTCAGGGAGTGTCGCAGACAGTTTCTGGAAGTGGACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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3UTR GCA 72 bp | TGGCTTACAGGGAAACTGAGAAGTGAATTGAACTTGTaGTGCCCGGTCACAGAGAAGGGCAGTTTGATCATT | + |
Preference number: 3 (lower is better) Translates to: WLTGKLRSELNL*CPVTEKGSLII Trigger: AATGATCAAACTGCCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR TCA 72 bp | TCTGTTCCAGTGTTACAATGGGCATGTTCGGTACTGTaGAAAGTTACAGGGGACTCAGAAATGGACGTTGGT | + |
Preference number: 3 (lower is better) Translates to: SVPVLQWACSVL*KVTGDSEMDVG Trigger: ACCAACGTCCATTTCTGAGTCCCCTGTAACTTTTCACAGTACCGAACATGCCCATTGTAACACTGGAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR GCA 72 bp | CTTACAGGGAAACTGAGAAGTGAATTGAACTTGTGCTaGCCGGTCACAGAGAAGGGCAGTTTGATCATTTCT | + |
Preference number: 3 (lower is better) Translates to: LTGKLRSELNLC*PVTEKGSLIIS Trigger: AGAAATGATCAAACTGCCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR CAA 90 bp | GAACAGGTGGAAACGAGAATAGTTCACAAAGCAAAACAGACAACATTACTAATTTCTGCAGAGTGTGATTaGGGGGCCTCCTCGGTTTGC | + |
Preference number: 3 (lower is better) Translates to: EQVETRIVHKAKQTTLLISAECD*GASSVC Trigger: GCAAACCGAGGAGGCCCCCAAATCACACTCTGCAGA...AATTAGTAATGTTGTCTGTTTTGCTTTGTGAACTATTCTCGTTTCCACCTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR TCA 72 bp | CAGGAAATGTATCGACTCCTCTCTCACTCATCAGAATaGCAGCCACTGTCTTTCTGTTCCAGTGTTACAATG | + |
Preference number: 3 (lower is better) Translates to: QEMYRLLSHSSE*QPLSFCSSVTM Trigger: CATTGTAACACTGGAACAGAAAGACAGTGGCTGTCATTCTGATGAGTGAGAGAGGAGTCGATACATTTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR-3UTR CAA 90 bp | TTCTGTGCTATCTGTCCAGGAGAGAGTTGTCACACAATCATGAAGCTCACACAGTATAATCCTTTTCTTTaGGATTCCATTCCAGCTTGG | + |
Preference number: 3 (lower is better) Translates to: FCAICPGESCHTIMKLTQYNPFL*DSIPAW Trigger: CCAAGCTGGAATGGAATCCAAAAGAAAAGGATTATA...CTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCCTGGACAGATAGCACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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3UTR CCA 72 bp | AATAGTTCACAAAGCAAAACAGACAACATTACTAATTaGCACAGACTAGCTGTTGACCTTAGAATACCCGTG | + |
Preference number: 3 (lower is better) Translates to: NSSQSKTDNITN*HRLAVDLRIPV Trigger: CACGGGTATTCTAAGGTCAACAGCTAGTCTGTGCCAATTAGTAATGTTGTCTGTTTTGCTTTGTGAACTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR TCA 72 bp | CCACATTCGCTGGTTAATGTGCACTGTAAATGGTTTTaGGTCCTTCACTATAAAAGCATTTGTTTAATGCAC | + |
Preference number: 3 (lower is better) Translates to: PHSLVNVHCKWF*VLHYKSICLMH Trigger: GTGCATTAAACAAATGCTTTTATAGTGAAGGACTCAAAACCATTTACAGTGCACATTAACCAGCGAATGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR GCA 72 bp | TTAGAAAATATAAAAATATTGCTACAGTGTCGTTGGTaGTATCCATCCTCCAGGGAAACATACCTTTGTAAA | + |
Preference number: 3 (lower is better) Translates to: LENIKILLQCRW*YPSSRETYLCK Trigger: TTTACAAAGGTATGTTTCCCTGGAGGATGGATAGCACCAACGACACTGTAGCAATATTTTTATATTTTCTAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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CDS-3UTR GCA 90 bp | ACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCCTCTCAGAAAGGGGTTGACGTaGCCAGAGAGCACCGCGACC | + |
Preference number: 4 (lower is better) Translates to: TACIQSAPASTGNVSTPLRKGLT*PESTAT Trigger: GGTCGCGGTGCTCTCTGGGCACGTCAACCCCTTTCT...GAGAGGAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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CDS-3UTR GCA 90 bp | GCCACAAGGCACTGTGTTCCACTATGGGTAAAGGCACGTGGTCGGGTCTCCAGTCGATGCCCATTCCGATaGATCCCACCAATCCAAGCG | + |
Preference number: 4 (lower is better) Translates to: ATRHCVPLWVKARGRVSSRCPFR*IPPIQA Trigger: CGCTTGGATTGGTGGGATGCATCGGAATGGGCATCG...ACTGGAGACCCGACCACGTGCCTTTACCCATAGTGGAACACAGTGCCTTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020249.2 |
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3UTR CAA 72 bp | GTTCCACTGGGGACAGGATTTGTAGGAGATGATCGATaGCAGGAGCGTGTACACCACCCCGCAGACGAAAGC | + |
Preference number: 4 (lower is better) Translates to: VPLGTGFVGDDR*QERVHHPADES Trigger: GCTTTCGTCTGCGGGGTGGTGTACACGCTCCTGCAATCGATCATCTCCTACAAATCCTGTCCCCAGTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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CDS-3UTR GCA 90 bp | ACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCCTCTCGGAGATGATGAAGGCTaGGGACGACCAAGTCACCAG | + |
Preference number: 4 (lower is better) Translates to: TACIQSAPASTGNVSTPLGDDEG*GRPSHQ Trigger: CTGGTGACTTGGTCGTCCGCAGCCTTCATCATCTCC...GAGAGGAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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CDS-3UTR GCA 90 bp | CCTTATAGTGGCCCACAGGCATTGATAGGAGCAGATAAACAGCAGCCCACATCTGGAGATGATGAAGGCTaGGGACGACCAAGTCACCAG | + |
Preference number: 4 (lower is better) Translates to: PYSGPQALIGADKQQPTSGDDEG*GRPSHQ Trigger: CTGGTGACTTGGTCGTCCGCAGCCTTCATCATCTCC...AGATGTGGGCTGCTGTTTATCTGCTCCTATCAATGCCTGTGGGCCACTATAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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CDS-3UTR CCA 90 bp | AGGGATAAAACTAGAAGTCGCATGGAATCTGCAGAGTGTGATTTGGGGGCCTCCCGGTCCACTCACAGATaGCGCTCACCACGTGATATA | + |
Preference number: 4 (lower is better) Translates to: RDKTRSRMESAECDLGASRSTHR*RSPRDI Trigger: TATATCACGTGGTGAGCGCCATCTGTGAGTGGACCG...GGAGGCCCCCAAATCACACTCTGCAGATTCCATGCGACTTCTAGTTTTATCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020249.2 |
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CDS-3UTR GCA 90 bp | ACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCCTCTCTGTGTACATCGTAGCTaGGCCAAGAAATGCAGAGAA | + |
Preference number: 4 (lower is better) Translates to: TACIQSAPASTGNVSTPLCVHRS*AKKCRE Trigger: TTCTCTGCATTTCTTGGCGCAGCTACGATGTACACA...GAGAGGAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020249.2 |
||
3UTR CAA 72 bp | ACTTCTTCCTCCACAACAGCTGGCGTTTCTTTGCCATaGGTGAACTGCATGAAAGGTAGAGTCTCCAGGCCT | + |
Preference number: 4 (lower is better) Translates to: TSSSTTAGVSLP*VNCMKGRVSRP Trigger: AGGCCTGGAGACTCTACCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGAGGAAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR CAA 72 bp | AAAACTAGAAGTCGCATGGAATCTGCAGAGTGTGATTaGGGGGCCTCCTCGGTTTGCCAAGACAGGTTTAGC | + |
Preference number: 4 (lower is better) Translates to: KTRSRMESAECD*GASSVCQDRFS Trigger: GCTAAACCTGTCTTGGCAAACCGAGGAGGCCCCCAAATCACACTCTGCAGATTCCATGCGACTTCTAGTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
||
3UTR CAA 72 bp | CTTTGGCTTACAGGGAAACTGAGAAGTGAATTGAACTaGTGCTGCCCGGTCACAGAGAAGGGCAGTTTGATC | + |
Preference number: 4 (lower is better) Translates to: LWLTGKLRSELN*CCPVTEKGSLI Trigger: GATCAAACTGCCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAGCCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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CDS-3UTR GCA 90 bp | AACATCCCTAGTCGTTACTTGTTCATCCATTTATGCGTGCATACATTCAATGAGAGAAAGGGGTTGACGTaGCCAGAGAGCACCGCGACC | + |
Preference number: 4 (lower is better) Translates to: NIPSRYLFIHLCVHTFNERKGLT*PESTAT Trigger: GGTCGCGGTGCTCTCTGGGCACGTCAACCCCTTTCT...CTCATTGAATGTATGCACGCATAAATGGATGAACAAGTAACGACTAGGGATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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CDS-3UTR CCA 90 bp | TGTGAAAAGTTACAGGGGACTCAGAAATGGACGTTGGTTGCCACCACTGCACACAAAAATACCACTCTCTaGAGGAGTTGTTCCTGTGTC | + |
Preference number: 4 (lower is better) Translates to: CEKLQGTQKWTLVATTAHKNTTL*RSCSCV Trigger: GACACAGGAACAACTCCTCCAGAGAGTGGTATTTTT...GTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGTCCCCTGTAACTTTTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020249.2 |
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3UTR CAA 72 bp | TTATCCACTTCTTCCTCCACAACAGCTGGCGTTTCTTaGCCATTGGTGAACTGCATGAAAGGTAGAGTCTCC | + |
Preference number: 4 (lower is better) Translates to: LSTSSSTTAGVS*PLVNCMKGRVS Trigger: GGAGACTCTACCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGAGGAAGAAGTGGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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CDS-3UTR TCA 90 bp | TTCTGTGCTATCTGTCCAGGAGAGAGTTGTCACACAATCATGAAGCTCACACAGTGGATATCCTTAGAGTaGCACTCTGGAAATCTTGGA | + |
Preference number: 4 (lower is better) Translates to: FCAICPGESCHTIMKLTQWISLE*HSGNLG Trigger: TCCAAGATTTCCAGAGTGTCACTCTAAGGATATCCA...CTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCCTGGACAGATAGCACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020249.2 |
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CDS-3UTR CCA 90 bp | AGAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGCTTAGAGTGACACTCTaGAAATCTTGGATGAATGTT | + |
Preference number: 4 (lower is better) Translates to: RELSHNHEAHTAGTGGNELRVTL*KSWMNV Trigger: AACATTCATCCAAGATTTCCAGAGTGTCACTCTAAG...CTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020249.2 |
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CDS-3UTR TCA 90 bp | CACATTCGCTGGTTAATGTGCACTGTAAATGGTTTTGAGTCCTTCACTATAAAAGGTTATAGAAATGAGTaGAGCACAGGCAATCATGGG | + |
Preference number: 4 (lower is better) Translates to: HIRWLMCTVNGFESFTIKGYRNE*STGNHG Trigger: CCCATGATTGCCTGTGCTTCACTCATTTCTATAACC...TTTTATAGTGAAGGACTCAAAACCATTTACAGTGCACATTAACCAGCGAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020249.2 |
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3UTR CAA 72 bp | AAAACCCTTAGCACCTCAAACATCCCTAGTCGTTACTaGTTCATCCATTTATGCGTGCATACATTCAATGAG | + |
Preference number: 4 (lower is better) Translates to: KTLSTSNIPSRY*FIHLCVHTFNE Trigger: CTCATTGAATGTATGCACGCATAAATGGATGAACAAGTAACGACTAGGGATGTTTGAGGTGCTAAGGGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020249.2 ENSMUST00000156097.2 |
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3UTR CAA 72 bp | AATGAGACAGGATTCTCGATCTTTCAAAAGTCGTCATaGATTTCTGTGGATATCCTTAGAGTGACACTCTGG | + |
Preference number: 4 (lower is better) Translates to: NETGFSIFQKSS*ISVDILRVTLW Trigger: CCAGAGTGTCACTCTAAGGATATCCACAGAAATCAATGACGACTTTTGAAAGATCGAGAATCCTGTCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156097.2 |
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CDS-3UTR CAA 90 bp | GCTGTCCAAATGGTCTCTGTCCTTGGAACGTGCCCTTGGGGCAGCTCCTACTGGGTAGGAGATGATCGATaGCAGGAGCGTGTACACCAC | + |
Preference number: 5 (lower is better) Translates to: AVQMVSVLGTCPWGSSYWVGDDR*QERVHH Trigger: GTGGTGTACACGCTCCTGCAATCGATCATCTCCTAC...CCAGTAGGAGCTGCCCCAAGGGCACGTTCCAAGGACAGAGACCATTTGGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020249.2 |
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CDS-3UTR CAA 90 bp | GGCCCACAGGCATTGATAGGAGCAGATAAACAGCAGCCCACATCTGGAAGTTTCGGATTCCATTCCAGCTaGGTTATAGAAATGAGTGAA | + |
Preference number: 5 (lower is better) Translates to: GPQALIGADKQQPTSGSFGFHSS*VIEMSE Trigger: TTCACTCATTTCTATAACCAAGCTGGAATGGAATCC...GAAACTTCCAGATGTGGGCTGCTGTTTATCTGCTCCTATCAATGCCTGTGGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020249.2 |
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CDS-3UTR CAA 90 bp | GCAAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTATAATCCTTTTCTTTaGGATTCCATTCCAGCTTGG | + |
Preference number: 5 (lower is better) Translates to: AKNSMHSVRPSFHRKCIDYNPFL*DSIPAW Trigger: CCAAGCTGGAATGGAATCCAAAAGAAAAGGATTATA...GTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020249.2 |
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CDS CCA 72 bp | AGAGAAGTTTATCATGAATCCAAAAATACCACTCTCTaGAGGAGTTGTTCCTGTGTCACTGATATAGGGGAG | + |
Preference number: 6 (lower is better) Translates to: REVYHESKNTTL*RSCSCVTDIGE Trigger: CTCCCCTATATCAGTGACACAGGAACAACTCCTCCAGAGAGTGGTATTTTTGGATTCATGATAAACTTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020249.2 |