RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DRAM1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020057

Ensembl transcript IDs: ENSMUST00000020249.2, ENSMUST00000156097.2

Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGTACACCACCCCGCAGACGAAAGCCAGAAGCGCACCGCCATCATaGACCACAGGCACGGCTAACTCCTGGAAGTTGGCTACGATGCCC +
Preference number: 1 (lower is better)
Translates to: VYTTPQTKARSAPPS*TTGTANSWKLATMP
Trigger: GGGCATCGTAGCCAACTTCCAGGAGTTAGCCGTGCCTGTGGTCCATGATGGCGGTGCGCTTCTGGCTTTCGTCTGCGGGGTGGTGTACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR CCA 90 bp GCCAGAAGCGCACCGCCATCATGGACCACAGGCACGGCTAACTCCTaGAAGTTGGCTACGATGCCCATTCCGATGCATCCCACCAATCCA +
Preference number: 1 (lower is better)
Translates to: ARSAPPSWTTGTANS*KLATMPIPMHPTNP
Trigger: TGGATTGGTGGGATGCATCGGAATGGGCATCGTAGCCAACTTCCAGGAGTTAGCCGTGCCTGTGGTCCATGATGGCGGTGCGCTTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR CCA 90 bp TGTGCCCCTTCATCGCCAGGTACCCTTTCACTAAGGCTGTCCAAATaGTCTCTGTCCTTGGAACGTGCCCTTGGGGCAGCTCCTACTGGC +
Preference number: 1 (lower is better)
Translates to: CAPSSPGTLSLRLSK*SLSLERALGAAPTG
Trigger: GCCAGTAGGAGCTGCCCCAAGGGCACGTTCCAAGGACAGAGACCATTTGGACAGCCTTAGTGAAAGGGTACCTGGCGATGAAGGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR TCA 90 bp GAAATTCAAGTCCCGGATGTGCCACAGATAAAGTCCCCATCAGGGTaGCATCCAAGCCCGTCCGTCCTCTGTCCACTTCCAGAAACTGTC +
Preference number: 1 (lower is better)
Translates to: EIQVPDVPQIKSPSG*HPSPSVLCPLPETV
Trigger: GACAGTTTCTGGAAGTGGACAGAGGACGGACGGGCTTGGATGTCACCCTGATGGGGACTTTATCTGTGGCACATCCGGGACTTGAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR GCA 90 bp TGGGAAGGCATCAACCAAGGCTCCCGCTCAAAGCAAAGAACAGCATaGATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCCT +
Preference number: 1 (lower is better)
Translates to: WEGINQGSRSKQRTA*IQSAPASTGNVSTP
Trigger: AGGAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTTGCTTTGAGCGGGAGCCTTGGTTGATGCCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR GCA 90 bp ACTTCTTCCTCCACAACAGCTGGCGTTTCTTTGCCATTGGTGAACTaGATGAAAGGTAGAGTCTCCAGGCCTTGCTTCGGAAAGGGCCTG +
Preference number: 1 (lower is better)
Translates to: TSSSTTAGVSLPLVN*MKGRVSRPCFGKGL
Trigger: CAGGCCCTTTCCGAAGCAAGGCCTGGAGACTCTACCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGAGGAAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CCA 90 bp TTTATTAAGCACCTATTGCATGCCACAAGGCACTGTGTTCCACTATaGGTAAAGGCACGTGGTCGGGTCTCCAGTGGAAGCGAAGAGAGC +
Preference number: 1 (lower is better)
Translates to: FIKHLLHATRHCVPL*VKARGRVSSGSEES
Trigger: GCTCTCTTCGCTTCCACTGGAGACCCGACCACGTGCCTTTACCCATAGTGGAACACAGTGCCTTGTGGCATGCAATAGGTGCTTAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CCA 90 bp ACAGGGATAAAACTAGAAGTCGCATGGAATCTGCAGAGTGTGATTTaGGGGCCTCCTCGGTTTGCCAAGACAGGTTTAGCCCATGTAACA +
Preference number: 1 (lower is better)
Translates to: TGIKLEVAWNLQSVI*GPPRFAKTGLAHVT
Trigger: TGTTACATGGGCTAAACCTGTCTTGGCAAACCGAGGAGGCCCCCAAATCACACTCTGCAGATTCCATGCGACTTCTAGTTTTATCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR GCA 90 bp TCTCTTTGGCTTACAGGGAAACTGAGAAGTGAATTGAACTTGTGCTaGCCGGTCACAGAGAAGGGCAGTTTGATCATTTCTAAGCTGGCC +
Preference number: 1 (lower is better)
Translates to: SLWLTGKLRSELNLC*PVTEKGSLIISKLA
Trigger: GGCCAGCTTAGAAATGATCAAACTGCCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAGCCAAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CCA 90 bp ATGTTCGGTACTGTGAAAAGTTACAGGGGACTCAGAAATGGACGTTaGTTGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCAT +
Preference number: 1 (lower is better)
Translates to: MFGTVKSYRGLRNGR*LPPLHTEEEDTGCH
Trigger: ATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGTCCCCTGTAACTTTTCACAGTACCGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR TCA 90 bp CAGCTTCCACAGGAAATGTATCGACTCCTCTCTCACTCATCAGAATaGCAGCCACTGTCTTTCTGTTCCAGTGTTACAATGGGCATGTTC +
Preference number: 1 (lower is better)
Translates to: QLPQEMYRLLSHSSE*QPLSFCSSVTMGMF
Trigger: GAACATGCCCATTGTAACACTGGAACAGAAAGACAGTGGCTGTCATTCTGATGAGTGAGAGAGGAGTCGATACATTTCCTGTGGAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR TCA 90 bp CCGTCCTCTGTCCACTTCCAGAAACTGTCTGCGACACTCCCTGAATaGGACAGGATTCTCGATCTTTCAAAAGTCGTCATTGATTTCTGT +
Preference number: 1 (lower is better)
Translates to: PSSVHFQKLSATLPE*DRILDLSKVVIDFC
Trigger: ACAGAAATCAATGACGACTTTTGAAAGATCGAGAATCCTGTCTCATTCAGGGAGTGTCGCAGACAGTTTCTGGAAGTGGACAGAGGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR CCA 90 bp AAGAAATGCAGAGAAGTTTATCATGAATCCAAAAATACCACTCTCTaGAGGAGTTGTTCCTGTGTCACTGGTCCCTCCCTCACGCTCCTC +
Preference number: 1 (lower is better)
Translates to: KKCREVYHESKNTTL*RSCSCVTGPSLTLL
Trigger: GAGGAGCGTGAGGGAGGGACCAGTGACACAGGAACAACTCCTCCAGAGAGTGGTATTTTTGGATTCATGATAAACTTCTCTGCATTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR GCA 90 bp CATTCTCTTTGGCTTACAGGGAAACTGAGAAGTGAATTGAACTTGTaGTGCCCGGTCACAGAGAAGGGCAGTTTGATCATTTCTAAGCTG +
Preference number: 1 (lower is better)
Translates to: HSLWLTGKLRSELNL*CPVTEKGSLIISKL
Trigger: CAGCTTAGAAATGATCAAACTGCCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAGCCAAAGAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CAA 90 bp TCGCCAGGTACCCTTTCACTAAGGCTGTCCAAATGGTCTCTGTCCTaGGAACGTGCCCTTGGGGCAGCTCCTACTGGCCCAGACTGGGGG +
Preference number: 2 (lower is better)
Translates to: SPGTLSLRLSKWSLS*ERALGAAPTGPDWG
Trigger: CCCCCAGTCTGGGCCAGTAGGAGCTGCCCCAAGGGCACGTTCCAAGGACAGAGACCATTTGGACAGCCTTAGTGAAAGGGTACCTGGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR TCA 90 bp GCTGTCCAAATGGTCTCTGTCCTTGGAACGTGCCCTTGGGGCAGCTCCTACTGGGCGACACTCCCTGAATaGGACAGGATTCTCGATCTT +
Preference number: 2 (lower is better)
Translates to: AVQMVSVLGTCPWGSSYWATLPE*DRILDL
Trigger: AAGATCGAGAATCCTGTCTCATTCAGGGAGTGTCGC...CCAGTAGGAGCTGCCCCAAGGGCACGTTCCAAGGACAGAGACCATTTGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR GCA 90 bp CGTTGGTTGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCATGGCAGATCTGTCCTTGGAACGTaGCCTTGGGGCAGCTCCTAC +
Preference number: 2 (lower is better)
Translates to: RWLPPLHTEEEDTGCHGRSVLGT*PWGSSY
Trigger: GTAGGAGCTGCCCCAAGGGCACGTTCCAAGGACAGA...TCTGCCATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CCA 90 bp AGCTGTGGGTCCCTTGGAGAAGTAAATGAGGGGGCTAAATTTTCGAACCGAGGTCTTGGAACGTGCCCTTaGGGCAGCTCCTACTGGCCC +
Preference number: 2 (lower is better)
Translates to: SCGSLGEVNEGAKFSNRGLGTCP*GSSYWP
Trigger: GGGCCAGTAGGAGCTGCCCCAAGGGCACGTTCCAAG...ACCTCGGTTCGAAAATTTAGCCCCCTCATTTACTTCTCCAAGGGACCCACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR TCA 90 bp GCAAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACGTCTGCGACACTCCCTaGATGAGACAGGATTCTCGA +
Preference number: 2 (lower is better)
Translates to: AKNSMHSVRPSFHRKCIDVCDTP*MRQDSR
Trigger: TCGAGAATCCTGTCTCATTCAGGGAGTGTCGCAGAC...GTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR TCA 90 bp AAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCGCCACCACTGCACACTaGGGAAGAAGACACAGGATG +
Preference number: 2 (lower is better)
Translates to: KEQHAFSPPQLPQEMYRLATTAH*GRRHRM
Trigger: CATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGC...GAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR GCA 90 bp TTCTGTGCTATCTGTCCAGGAGAGAGTTGTCACACAATCATGAAGCTCACACAGGGAGGCACTGCTGTGTaGCCCTTCATCGCCAGGTAC +
Preference number: 2 (lower is better)
Translates to: FCAICPGESCHTIMKLTQGGTAV*PFIARY
Trigger: GTACCTGGCGATGAAGGGGCACACAGCAGTGCCTCC...CTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCCTGGACAGATAGCACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR GCA 90 bp GCCACAAGGCACTGTGTTCCACTATGGGTAAAGGCACGTGGTCGGGTCTCCAGTTGTGTACATCGTAGCTaGGCCAAGAAATGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: ATRHCVPLWVKARGRVSSCVHRS*AKKCRE
Trigger: TTCTCTGCATTTCTTGGCGCAGCTACGATGTACACA...ACTGGAGACCCGACCACGTGCCTTTACCCATAGTGGAACACAGTGCCTTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR-3UTR CCA 90 bp AAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCAATGGTCTCTGTCCTTaGAACGTGCCCTTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: KEQHAFSPPQLPQEMYRLNGLCP*NVPLGQ
Trigger: CTGCCCCAAGGGCACGTTCCAAGGACAGAGACCATT...GAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CAA 90 bp GGGGTCTTGTTATCCACTTCTTCCTCCACAACAGCTGGCGTTTCTTaGCCATTGGTGAACTGCATGAAAGGTAGAGTCTCCAGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: GVLLSTSSSTTAGVS*PLVNCMKGRVSRPC
Trigger: GCAAGGCCTGGAGACTCTACCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGAGGAAGAAGTGGATAACAAGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR TCA 90 bp AATGGACGTTGGTTGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCATGTCTGCGACACTCCCTaGATGAGACAGGATTCTCGA +
Preference number: 2 (lower is better)
Translates to: NGRWLPPLHTEEEDTGCHVCDTP*MRQDSR
Trigger: TCGAGAATCCTGTCTCATTCAGGGAGTGTCGCAGAC...ATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR TCA 90 bp CGTTGGTTGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCATGGCAGAAGGGAAACTGAGAAGTaGATTGAACTTGTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: RWLPPLHTEEEDTGCHGRRETEK*IELVLP
Trigger: GGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCT...TCTGCCATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR TCA 90 bp ACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCCTCTCATCTGGAAGTTTCTATaGGCGCTCTCCTTTCTCCCT +
Preference number: 2 (lower is better)
Translates to: TACIQSAPASTGNVSTPLIWKFL*ALSFLP
Trigger: AGGGAGAAAGGAGAGCGCTCATAGAAACTTCCAGAT...GAGAGGAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR GCA 90 bp GCAAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACGTTGGTTGCCACCACTaGACACTGAGGAAGAAGACA +
Preference number: 2 (lower is better)
Translates to: AKNSMHSVRPSFHRKCIDVGCHH*TLRKKT
Trigger: TGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAAC...GTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CCA 90 bp AGCTGTGGGTCCCTTGGAGAAGTAAATGAGGGGGCTAAATTTTCGAACCGAGGTCGGTCCACTCACAGATaGCGCTCACCACGTGATATA +
Preference number: 2 (lower is better)
Translates to: SCGSLGEVNEGAKFSNRGRSTHR*RSPRDI
Trigger: TATATCACGTGGTGAGCGCCATCTGTGAGTGGACCG...ACCTCGGTTCGAAAATTTAGCCCCCTCATTTACTTCTCCAAGGGACCCACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR CAA 90 bp TTCGGTACTGTGAAAAGTTACAGGGGACTCAGAAATGGACGTTGGTaGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCATGGC +
Preference number: 2 (lower is better)
Translates to: FGTVKSYRGLRNGRW*PPLHTEEEDTGCHG
Trigger: GCCATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGTCCCCTGTAACTTTTCACAGTACCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR TCA 90 bp AAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCGCTCTCCTTTCTCCCTaGCTTGGATCTGCATTCTCT +
Preference number: 2 (lower is better)
Translates to: KEQHAFSPPQLPQEMYRLALLSP*LGSAFS
Trigger: AGAGAATGCAGATCCAAGTCAGGGAGAAAGGAGAGC...GAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR TCA 90 bp TGTATCGACTCCTCTCTCACTCATCAGAATGACAGCCACTGTCTTTCTGTTCCAGCCACCACTGCACACTaGGGAAGAAGACACAGGATG +
Preference number: 2 (lower is better)
Translates to: CIDSSLTHQNDSHCLSVPATTAH*GRRHRM
Trigger: CATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGC...TGGAACAGAAAGACAGTGGCTGTCATTCTGATGAGTGAGAGAGGAGTCGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR GCA 90 bp TGTGAAAAGTTACAGGGGACTCAGAAATGGACGTTGGTTGCCACCACTGCACACCTACAGTGTCGTTGGTaGTATCCATCCTCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: CEKLQGTQKWTLVATTAHLQCRW*YPSSRE
Trigger: TTCCCTGGAGGATGGATAGCACCAACGACACTGTAG...GTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGTCCCCTGTAACTTTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR GCA 90 bp GAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGAATGTCATGGCAGAAGTaGCTGCTGAGCAGCACCCTT +
Preference number: 2 (lower is better)
Translates to: ESCHTIMKLTQLEQVETRMSWQK*LLSSTL
Trigger: AAGGGTGCTGCTCAGCAGGCACTTCTGCCATGACAT...TCTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR GCA 90 bp TTCTGTGCTATCTGTCCAGGAGAGAGTTGTCACACAATCATGAAGCTCACACAGCGATGCCCATTCCGATaGATCCCACCAATCCAAGCG +
Preference number: 2 (lower is better)
Translates to: FCAICPGESCHTIMKLTQRCPFR*IPPIQA
Trigger: CGCTTGGATTGGTGGGATGCATCGGAATGGGCATCG...CTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCCTGGACAGATAGCACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR-3UTR CCA 90 bp GAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGAGAGCCAAGTGCATTCTaGGAAGGCATCAACCAAGGC +
Preference number: 2 (lower is better)
Translates to: ESCHTIMKLTQLEQVETREPSAF*EGINQG
Trigger: GCCTTGGTTGATGCCTTCCCAGAATGCACTTGGCTC...TCTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CAA 90 bp TTGTTATCCACTTCTTCCTCCACAACAGCTGGCGTTTCTTTGCCATaGGTGAACTGCATGAAAGGTAGAGTCTCCAGGCCTTGCTTCGGA +
Preference number: 2 (lower is better)
Translates to: LLSTSSSTTAGVSLP*VNCMKGRVSRPCFG
Trigger: TCCGAAGCAAGGCCTGGAGACTCTACCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGAGGAAGAAGTGGATAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CAA 90 bp AACAGGGATAAAACTAGAAGTCGCATGGAATCTGCAGAGTGTGATTaGGGGGCCTCCTCGGTTTGCCAAGACAGGTTTAGCCCATGTAAC +
Preference number: 2 (lower is better)
Translates to: NRDKTRSRMESAECD*GASSVCQDRFSPCN
Trigger: GTTACATGGGCTAAACCTGTCTTGGCAAACCGAGGAGGCCCCCAAATCACACTCTGCAGATTCCATGCGACTTCTAGTTTTATCCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR GCA 90 bp GCCTCCTCGGTTTGCCAAGACAGGTTTAGCCCATGTAACAATTTCTGTGCTATCCTACAGTGTCGTTGGTaGTATCCATCCTCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: ASSVCQDRFSPCNNFCAILQCRW*YPSSRE
Trigger: TTCCCTGGAGGATGGATAGCACCAACGACACTGTAG...GATAGCACAGAAATTGTTACATGGGCTAAACCTGTCTTGGCAAACCGAGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR GCA 90 bp GGCCCACAGGCATTGATAGGAGCAGATAAACAGCAGCCCACATCTGGAAGTTTCTTGCCATTGGTGAACTaGATGAAAGGTAGAGTCTCC +
Preference number: 2 (lower is better)
Translates to: GPQALIGADKQQPTSGSFLPLVN*MKGRVS
Trigger: GGAGACTCTACCTTTCATGCAGTTCACCAATGGCAA...GAAACTTCCAGATGTGGGCTGCTGTTTATCTGCTCCTATCAATGCCTGTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR GCA 90 bp TTCTTCCTCCACAACAGCTGGCGTTTCTTTGCCATTGGTGAACTGCATGAAAGGGCGAAGAGAGCCAAGTaGATTCTGGGAAGGCATCAA +
Preference number: 2 (lower is better)
Translates to: FFLHNSWRFFAIGELHERAKRAK*ILGRHQ
Trigger: TTGATGCCTTCCCAGAATGCACTTGGCTCTCTTCGC...CCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGAGGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CCA 90 bp AGAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGGCGGCAGTAAAGCTGTaGGTCCCTTGGAGAAGTAAA +
Preference number: 2 (lower is better)
Translates to: RELSHNHEAHTAGTGGNEAAVKL*VPWRSK
Trigger: TTTACTTCTCCAAGGGACCCACAGCTTTACTGCCGC...CTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CCA 90 bp GCCTCCTCGGTTTGCCAAGACAGGTTTAGCCCATGTAACAATTTCTGTGCTATCCCTTTCTCCCTGACTTaGATCTGCATTCTCTTTGGC +
Preference number: 2 (lower is better)
Translates to: ASSVCQDRFSPCNNFCAIPFSLT*ICILFG
Trigger: GCCAAAGAGAATGCAGATCCAAGTCAGGGAGAAAGG...GATAGCACAGAAATTGTTACATGGGCTAAACCTGTCTTGGCAAACCGAGGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR TCA 90 bp GAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGAGGTTATAGAAATGAGTaGAGCACAGGCAATCATGGG +
Preference number: 2 (lower is better)
Translates to: ESCHTIMKLTQLEQVETRGYRNE*STGNHG
Trigger: CCCATGATTGCCTGTGCTTCACTCATTTCTATAACC...TCTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR CAA 90 bp CTGCATTCTCTTTGGCTTACAGGGAAACTGAGAAGTGAATTGAACTaGTGCTGCCCGGTCACAGAGAAGGGCAGTTTGATCATTTCTAAG +
Preference number: 2 (lower is better)
Translates to: LHSLWLTGKLRSELN*CCPVTEKGSLIISK
Trigger: CTTAGAAATGATCAAACTGCCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAGCCAAAGAGAATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR GCA 90 bp GAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGATTATTAAGCACCTATTaGATGCCACAAGGCACTGTG +
Preference number: 2 (lower is better)
Translates to: ESCHTIMKLTQLEQVETRLLSTY*MPQGTV
Trigger: CACAGTGCCTTGTGGCATGCAATAGGTGCTTAATAA...TCTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CCA 90 bp GTTACAATGGGCATGTTCGGTACTGTGAAAAGTTACAGGGGACTCAGAAATGGACTAAGGCTGTCCAAATaGTCTCTGTCCTTGGAACGT +
Preference number: 2 (lower is better)
Translates to: VTMGMFGTVKSYRGLRNGLRLSK*SLSLER
Trigger: ACGTTCCAAGGACAGAGACCATTTGGACAGCCTTAG...TCCATTTCTGAGTCCCCTGTAACTTTTCACAGTACCGAACATGCCCATTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CCA 90 bp AACGAGAATAGTTCACAAAGCAAAACAGACAACATTACTAATTGGCACAGACTACTGCAGAGTGTGATTTaGGGGCCTCCTCGGTTTGCC +
Preference number: 2 (lower is better)
Translates to: NENSSQSKTDNITNWHRLLQSVI*GPPRFA
Trigger: GGCAAACCGAGGAGGCCCCCAAATCACACTCTGCAG...TAGTCTGTGCCAATTAGTAATGTTGTCTGTTTTGCTTTGTGAACTATTCTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CAA 90 bp CACTCCCTGAATGAGACAGGATTCTCGATCTTTCAAAAGTCGTCATaGATTTCTGTGGATATCCTTAGAGTGACACTCTGGAAATCTTGG +
Preference number: 2 (lower is better)
Translates to: HSLNETGFSIFQKSS*ISVDILRVTLWKSW
Trigger: CCAAGATTTCCAGAGTGTCACTCTAAGGATATCCACAGAAATCAATGACGACTTTTGAAAGATCGAGAATCCTGTCTCATTCAGGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR-3UTR TCA 90 bp CACATTCGCTGGTTAATGTGCACTGTAAATGGTTTTGAGTCCTTCACTATAAAAGCGACACTCCCTGAATaGGACAGGATTCTCGATCTT +
Preference number: 2 (lower is better)
Translates to: HIRWLMCTVNGFESFTIKATLPE*DRILDL
Trigger: AAGATCGAGAATCCTGTCTCATTCAGGGAGTGTCGC...TTTTATAGTGAAGGACTCAAAACCATTTACAGTGCACATTAACCAGCGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CCA 90 bp GAACAGGTGGAAACGAGAATAGTTCACAAAGCAAAACAGACAACATTACTAATTCTTAGAGTGACACTCTaGAAATCTTGGATGAATGTT +
Preference number: 2 (lower is better)
Translates to: EQVETRIVHKAKQTTLLILRVTL*KSWMNV
Trigger: AACATTCATCCAAGATTTCCAGAGTGTCACTCTAAG...AATTAGTAATGTTGTCTGTTTTGCTTTGTGAACTATTCTCGTTTCCACCTGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR CCA 72 bp GCACCGCCATCATGGACCACAGGCACGGCTAACTCCTaGAAGTTGGCTACGATGCCCATTCCGATGCATCCC +
Preference number: 3 (lower is better)
Translates to: APPSWTTGTANS*KLATMPIPMHP
Trigger: GGGATGCATCGGAATGGGCATCGTAGCCAACTTCCAGGAGTTAGCCGTGCCTGTGGTCCATGATGGCGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR CCA 72 bp GCTGCGCACGAAACAGCGGAGATGGCCATCCTGACATaGCACGTGGTGAGACTGTTCCACTGGGGACAGGAT +
Preference number: 3 (lower is better)
Translates to: AAHETAEMAILT*HVVRLFHWGQD
Trigger: ATCCTGTCCCCAGTGGAACAGTCTCACCACGTGCCATGTCAGGATGGCCATCTCCGCTGTTTCGTGCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR TCA 72 bp GTCCCGGATGTGCCACAGATAAAGTCCCCATCAGGGTaGCATCCAAGCCCGTCCGTCCTCTGTCCACTTCCA +
Preference number: 3 (lower is better)
Translates to: VPDVPQIKSPSG*HPSPSVLCPLP
Trigger: TGGAAGTGGACAGAGGACGGACGGGCTTGGATGTCACCCTGATGGGGACTTTATCTGTGGCACATCCGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CCA 72 bp GGTCTCCAGTGGAAGCGAAGAGAGCCAAGTGCATTCTaGGAAGGCATCAACCAAGGCTCCCGCTCAAAGCAA +
Preference number: 3 (lower is better)
Translates to: GLQWKRREPSAF*EGINQGSRSKQ
Trigger: TTGCTTTGAGCGGGAGCCTTGGTTGATGCCTTCCCAGAATGCACTTGGCTCTCTTCGCTTCCACTGGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CCA 72 bp CACAAGGCACTGTGTTCCACTATGGGTAAAGGCACGTaGTCGGGTCTCCAGTGGAAGCGAAGAGAGCCAAGT +
Preference number: 3 (lower is better)
Translates to: HKALCSTMGKGT*SGLQWKRREPS
Trigger: ACTTGGCTCTCTTCGCTTCCACTGGAGACCCGACCACGTGCCTTTACCCATAGTGGAACACAGTGCCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CAA 90 bp ACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCCTCTCCACTCTCTGGAGGAGTaGTTCCTGTGTCACTGGTCC +
Preference number: 3 (lower is better)
Translates to: TACIQSAPASTGNVSTPLHSLEE*FLCHWS
Trigger: GGACCAGTGACACAGGAACAACTCCTCCAGAGAGTG...GAGAGGAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR GCA 72 bp ACAGGGGACTCAGAAATGGACGTTGGTTGCCACCACTaGACACTGAGGAAGAAGACACAGGATGTCATGGCA +
Preference number: 3 (lower is better)
Translates to: TGDSEMDVGCHH*TLRKKTQDVMA
Trigger: TGCCATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGTCCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CAA 90 bp AATGGACGTTGGTTGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCATAAATGGTCTCTGTCCTaGGAACGTGCCCTTGGGGCA +
Preference number: 3 (lower is better)
Translates to: NGRWLPPLHTEEEDTGCHKWSLS*ERALGA
Trigger: TGCCCCAAGGGCACGTTCCAAGGACAGAGACCATTT...ATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR TCA 72 bp ACTCAGAAATGGACGTTGGTTGCCACCACTGCACACTaGGGAAGAAGACACAGGATGTCATGGCAGAAGTGC +
Preference number: 3 (lower is better)
Translates to: TQKWTLVATTAH*GRRHRMSWQKC
Trigger: GCACTTCTGCCATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR GCA 72 bp TCCACAACAGCTGGCGTTTCTTTGCCATTGGTGAACTaGATGAAAGGTAGAGTCTCCAGGCCTTGCTTCGGA +
Preference number: 3 (lower is better)
Translates to: STTAGVSLPLVN*MKGRVSRPCFG
Trigger: TCCGAAGCAAGGCCTGGAGACTCTACCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR GCA 72 bp ATCAACCAAGGCTCCCGCTCAAAGCAAAGAACAGCATaGATTCAGTCCGCCCCAGCTTCCACAGGAAATGTA +
Preference number: 3 (lower is better)
Translates to: INQGSRSKQRTA*IQSAPASTGNV
Trigger: TACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTTGCTTTGAGCGGGAGCCTTGGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CCA 72 bp AAACTAGAAGTCGCATGGAATCTGCAGAGTGTGATTTaGGGGCCTCCTCGGTTTGCCAAGACAGGTTTAGCC +
Preference number: 3 (lower is better)
Translates to: KLEVAWNLQSVI*GPPRFAKTGLA
Trigger: GGCTAAACCTGTCTTGGCAAACCGAGGAGGCCCCCAAATCACACTCTGCAGATTCCATGCGACTTCTAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CAA 90 bp TTCTGTGCTATCTGTCCAGGAGAGAGTTGTCACACAATCATGAAGCTCACACAGAAATGGTCTCTGTCCTaGGAACGTGCCCTTGGGGCA +
Preference number: 3 (lower is better)
Translates to: FCAICPGESCHTIMKLTQKWSLS*ERALGA
Trigger: TGCCCCAAGGGCACGTTCCAAGGACAGAGACCATTT...CTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCCTGGACAGATAGCACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CAA 90 bp GAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGAACAGCTGGCGTTTCTTaGCCATTGGTGAACTGCATG +
Preference number: 3 (lower is better)
Translates to: ESCHTIMKLTQLEQVETRTAGVS*PLVNCM
Trigger: CATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGT...TCTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CAA 90 bp TTCTGTGCTATCTGTCCAGGAGAGAGTTGTCACACAATCATGAAGCTCACACAGGTAGGAGATGATCGATaGCAGGAGCGTGTACACCAC +
Preference number: 3 (lower is better)
Translates to: FCAICPGESCHTIMKLTQVGDDR*QERVHH
Trigger: GTGGTGTACACGCTCCTGCAATCGATCATCTCCTAC...CTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCCTGGACAGATAGCACAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR TCA 72 bp TCTGCATTCTCTTTGGCTTACAGGGAAACTGAGAAGTaGATTGAACTTGTGCTGCCCGGTCACAGAGAAGGG +
Preference number: 3 (lower is better)
Translates to: SAFSLAYRETEK*IELVLPGHREG
Trigger: CCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAGCCAAAGAGAATGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR GCA 72 bp GAATCTGCAGAGTGTGATTTGGGGGCCTCCTCGGTTTaGCAAGACAGGTTTAGCCCATGTAACAATTTCTGT +
Preference number: 3 (lower is better)
Translates to: ESAECDLGASSV*QDRFSPCNNFC
Trigger: ACAGAAATTGTTACATGGGCTAAACCTGTCTTGGCAAACCGAGGAGGCCCCCAAATCACACTCTGCAGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CCA 72 bp ACTGTGAAAAGTTACAGGGGACTCAGAAATGGACGTTaGTTGCCACCACTGCACACTGAGGAAGAAGACACA +
Preference number: 3 (lower is better)
Translates to: TVKSYRGLRNGR*LPPLHTEEEDT
Trigger: TGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGTCCCCTGTAACTTTTCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CAA 90 bp GCAAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTTTATTAAGCACCTATaGCATGCCACAAGGCACTGT +
Preference number: 3 (lower is better)
Translates to: AKNSMHSVRPSFHRKCIDFIKHL*HATRHC
Trigger: ACAGTGCCTTGTGGCATGCAATAGGTGCTTAATAAA...GTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CAA 90 bp GGTTGCCACCACTGCACACTGAGGAAGAAGACACAGGATGTCATGGCAGAAGTGGGATTCCATTCCAGCTaGGTTATAGAAATGAGTGAA +
Preference number: 3 (lower is better)
Translates to: GCHHCTLRKKTQDVMAEVGFHSS*VIEMSE
Trigger: TTCACTCATTTCTATAACCAAGCTGGAATGGAATCC...CACTTCTGCCATGACATCCTGTGTCTTCTTCCTCAGTGTGCAGTGGTGGCAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR TCA 72 bp CTCTGTCCACTTCCAGAAACTGTCTGCGACACTCCCTaGATGAGACAGGATTCTCGATCTTTCAAAAGTCGT +
Preference number: 3 (lower is better)
Translates to: LCPLPETVCDTP*MRQDSRSFKSR
Trigger: ACGACTTTTGAAAGATCGAGAATCCTGTCTCATTCAGGGAGTGTCGCAGACAGTTTCTGGAAGTGGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR GCA 72 bp TGGCTTACAGGGAAACTGAGAAGTGAATTGAACTTGTaGTGCCCGGTCACAGAGAAGGGCAGTTTGATCATT +
Preference number: 3 (lower is better)
Translates to: WLTGKLRSELNL*CPVTEKGSLII
Trigger: AATGATCAAACTGCCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR TCA 72 bp TCTGTTCCAGTGTTACAATGGGCATGTTCGGTACTGTaGAAAGTTACAGGGGACTCAGAAATGGACGTTGGT +
Preference number: 3 (lower is better)
Translates to: SVPVLQWACSVL*KVTGDSEMDVG
Trigger: ACCAACGTCCATTTCTGAGTCCCCTGTAACTTTTCACAGTACCGAACATGCCCATTGTAACACTGGAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR GCA 72 bp CTTACAGGGAAACTGAGAAGTGAATTGAACTTGTGCTaGCCGGTCACAGAGAAGGGCAGTTTGATCATTTCT +
Preference number: 3 (lower is better)
Translates to: LTGKLRSELNLC*PVTEKGSLIIS
Trigger: AGAAATGATCAAACTGCCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CAA 90 bp GAACAGGTGGAAACGAGAATAGTTCACAAAGCAAAACAGACAACATTACTAATTTCTGCAGAGTGTGATTaGGGGGCCTCCTCGGTTTGC +
Preference number: 3 (lower is better)
Translates to: EQVETRIVHKAKQTTLLISAECD*GASSVC
Trigger: GCAAACCGAGGAGGCCCCCAAATCACACTCTGCAGA...AATTAGTAATGTTGTCTGTTTTGCTTTGTGAACTATTCTCGTTTCCACCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR TCA 72 bp CAGGAAATGTATCGACTCCTCTCTCACTCATCAGAATaGCAGCCACTGTCTTTCTGTTCCAGTGTTACAATG +
Preference number: 3 (lower is better)
Translates to: QEMYRLLSHSSE*QPLSFCSSVTM
Trigger: CATTGTAACACTGGAACAGAAAGACAGTGGCTGTCATTCTGATGAGTGAGAGAGGAGTCGATACATTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR-3UTR CAA 90 bp TTCTGTGCTATCTGTCCAGGAGAGAGTTGTCACACAATCATGAAGCTCACACAGTATAATCCTTTTCTTTaGGATTCCATTCCAGCTTGG +
Preference number: 3 (lower is better)
Translates to: FCAICPGESCHTIMKLTQYNPFL*DSIPAW
Trigger: CCAAGCTGGAATGGAATCCAAAAGAAAAGGATTATA...CTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCCTGGACAGATAGCACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
3UTR CCA 72 bp AATAGTTCACAAAGCAAAACAGACAACATTACTAATTaGCACAGACTAGCTGTTGACCTTAGAATACCCGTG +
Preference number: 3 (lower is better)
Translates to: NSSQSKTDNITN*HRLAVDLRIPV
Trigger: CACGGGTATTCTAAGGTCAACAGCTAGTCTGTGCCAATTAGTAATGTTGTCTGTTTTGCTTTGTGAACTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR TCA 72 bp CCACATTCGCTGGTTAATGTGCACTGTAAATGGTTTTaGGTCCTTCACTATAAAAGCATTTGTTTAATGCAC +
Preference number: 3 (lower is better)
Translates to: PHSLVNVHCKWF*VLHYKSICLMH
Trigger: GTGCATTAAACAAATGCTTTTATAGTGAAGGACTCAAAACCATTTACAGTGCACATTAACCAGCGAATGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR GCA 72 bp TTAGAAAATATAAAAATATTGCTACAGTGTCGTTGGTaGTATCCATCCTCCAGGGAAACATACCTTTGTAAA +
Preference number: 3 (lower is better)
Translates to: LENIKILLQCRW*YPSSRETYLCK
Trigger: TTTACAAAGGTATGTTTCCCTGGAGGATGGATAGCACCAACGACACTGTAGCAATATTTTTATATTTTCTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
CDS-3UTR GCA 90 bp ACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCCTCTCAGAAAGGGGTTGACGTaGCCAGAGAGCACCGCGACC +
Preference number: 4 (lower is better)
Translates to: TACIQSAPASTGNVSTPLRKGLT*PESTAT
Trigger: GGTCGCGGTGCTCTCTGGGCACGTCAACCCCTTTCT...GAGAGGAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
CDS-3UTR GCA 90 bp GCCACAAGGCACTGTGTTCCACTATGGGTAAAGGCACGTGGTCGGGTCTCCAGTCGATGCCCATTCCGATaGATCCCACCAATCCAAGCG +
Preference number: 4 (lower is better)
Translates to: ATRHCVPLWVKARGRVSSRCPFR*IPPIQA
Trigger: CGCTTGGATTGGTGGGATGCATCGGAATGGGCATCG...ACTGGAGACCCGACCACGTGCCTTTACCCATAGTGGAACACAGTGCCTTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020249.2
3UTR CAA 72 bp GTTCCACTGGGGACAGGATTTGTAGGAGATGATCGATaGCAGGAGCGTGTACACCACCCCGCAGACGAAAGC +
Preference number: 4 (lower is better)
Translates to: VPLGTGFVGDDR*QERVHHPADES
Trigger: GCTTTCGTCTGCGGGGTGGTGTACACGCTCCTGCAATCGATCATCTCCTACAAATCCTGTCCCCAGTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
CDS-3UTR GCA 90 bp ACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCCTCTCGGAGATGATGAAGGCTaGGGACGACCAAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: TACIQSAPASTGNVSTPLGDDEG*GRPSHQ
Trigger: CTGGTGACTTGGTCGTCCGCAGCCTTCATCATCTCC...GAGAGGAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
CDS-3UTR GCA 90 bp CCTTATAGTGGCCCACAGGCATTGATAGGAGCAGATAAACAGCAGCCCACATCTGGAGATGATGAAGGCTaGGGACGACCAAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: PYSGPQALIGADKQQPTSGDDEG*GRPSHQ
Trigger: CTGGTGACTTGGTCGTCCGCAGCCTTCATCATCTCC...AGATGTGGGCTGCTGTTTATCTGCTCCTATCAATGCCTGTGGGCCACTATAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
CDS-3UTR CCA 90 bp AGGGATAAAACTAGAAGTCGCATGGAATCTGCAGAGTGTGATTTGGGGGCCTCCCGGTCCACTCACAGATaGCGCTCACCACGTGATATA +
Preference number: 4 (lower is better)
Translates to: RDKTRSRMESAECDLGASRSTHR*RSPRDI
Trigger: TATATCACGTGGTGAGCGCCATCTGTGAGTGGACCG...GGAGGCCCCCAAATCACACTCTGCAGATTCCATGCGACTTCTAGTTTTATCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020249.2
CDS-3UTR GCA 90 bp ACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTCCTCTCTGTGTACATCGTAGCTaGGCCAAGAAATGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: TACIQSAPASTGNVSTPLCVHRS*AKKCRE
Trigger: TTCTCTGCATTTCTTGGCGCAGCTACGATGTACACA...GAGAGGAGTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020249.2
3UTR CAA 72 bp ACTTCTTCCTCCACAACAGCTGGCGTTTCTTTGCCATaGGTGAACTGCATGAAAGGTAGAGTCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TSSSTTAGVSLP*VNCMKGRVSRP
Trigger: AGGCCTGGAGACTCTACCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGAGGAAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CAA 72 bp AAAACTAGAAGTCGCATGGAATCTGCAGAGTGTGATTaGGGGGCCTCCTCGGTTTGCCAAGACAGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: KTRSRMESAECD*GASSVCQDRFS
Trigger: GCTAAACCTGTCTTGGCAAACCGAGGAGGCCCCCAAATCACACTCTGCAGATTCCATGCGACTTCTAGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CAA 72 bp CTTTGGCTTACAGGGAAACTGAGAAGTGAATTGAACTaGTGCTGCCCGGTCACAGAGAAGGGCAGTTTGATC +
Preference number: 4 (lower is better)
Translates to: LWLTGKLRSELN*CCPVTEKGSLI
Trigger: GATCAAACTGCCCTTCTCTGTGACCGGGCAGCACAAGTTCAATTCACTTCTCAGTTTCCCTGTAAGCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
CDS-3UTR GCA 90 bp AACATCCCTAGTCGTTACTTGTTCATCCATTTATGCGTGCATACATTCAATGAGAGAAAGGGGTTGACGTaGCCAGAGAGCACCGCGACC +
Preference number: 4 (lower is better)
Translates to: NIPSRYLFIHLCVHTFNERKGLT*PESTAT
Trigger: GGTCGCGGTGCTCTCTGGGCACGTCAACCCCTTTCT...CTCATTGAATGTATGCACGCATAAATGGATGAACAAGTAACGACTAGGGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
CDS-3UTR CCA 90 bp TGTGAAAAGTTACAGGGGACTCAGAAATGGACGTTGGTTGCCACCACTGCACACAAAAATACCACTCTCTaGAGGAGTTGTTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: CEKLQGTQKWTLVATTAHKNTTL*RSCSCV
Trigger: GACACAGGAACAACTCCTCCAGAGAGTGGTATTTTT...GTGTGCAGTGGTGGCAACCAACGTCCATTTCTGAGTCCCCTGTAACTTTTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000020249.2
3UTR CAA 72 bp TTATCCACTTCTTCCTCCACAACAGCTGGCGTTTCTTaGCCATTGGTGAACTGCATGAAAGGTAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LSTSSSTTAGVS*PLVNCMKGRVS
Trigger: GGAGACTCTACCTTTCATGCAGTTCACCAATGGCAAAGAAACGCCAGCTGTTGTGGAGGAAGAAGTGGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
CDS-3UTR TCA 90 bp TTCTGTGCTATCTGTCCAGGAGAGAGTTGTCACACAATCATGAAGCTCACACAGTGGATATCCTTAGAGTaGCACTCTGGAAATCTTGGA +
Preference number: 4 (lower is better)
Translates to: FCAICPGESCHTIMKLTQWISLE*HSGNLG
Trigger: TCCAAGATTTCCAGAGTGTCACTCTAAGGATATCCA...CTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCCTGGACAGATAGCACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020249.2
CDS-3UTR CCA 90 bp AGAGAGTTGTCACACAATCATGAAGCTCACACAGCTGGAACAGGTGGAAACGAGCTTAGAGTGACACTCTaGAAATCTTGGATGAATGTT +
Preference number: 4 (lower is better)
Translates to: RELSHNHEAHTAGTGGNELRVTL*KSWMNV
Trigger: AACATTCATCCAAGATTTCCAGAGTGTCACTCTAAG...CTCGTTTCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020249.2
CDS-3UTR TCA 90 bp CACATTCGCTGGTTAATGTGCACTGTAAATGGTTTTGAGTCCTTCACTATAAAAGGTTATAGAAATGAGTaGAGCACAGGCAATCATGGG +
Preference number: 4 (lower is better)
Translates to: HIRWLMCTVNGFESFTIKGYRNE*STGNHG
Trigger: CCCATGATTGCCTGTGCTTCACTCATTTCTATAACC...TTTTATAGTGAAGGACTCAAAACCATTTACAGTGCACATTAACCAGCGAATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020249.2
3UTR CAA 72 bp AAAACCCTTAGCACCTCAAACATCCCTAGTCGTTACTaGTTCATCCATTTATGCGTGCATACATTCAATGAG +
Preference number: 4 (lower is better)
Translates to: KTLSTSNIPSRY*FIHLCVHTFNE
Trigger: CTCATTGAATGTATGCACGCATAAATGGATGAACAAGTAACGACTAGGGATGTTTGAGGTGCTAAGGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020249.2
ENSMUST00000156097.2
3UTR CAA 72 bp AATGAGACAGGATTCTCGATCTTTCAAAAGTCGTCATaGATTTCTGTGGATATCCTTAGAGTGACACTCTGG +
Preference number: 4 (lower is better)
Translates to: NETGFSIFQKSS*ISVDILRVTLW
Trigger: CCAGAGTGTCACTCTAAGGATATCCACAGAAATCAATGACGACTTTTGAAAGATCGAGAATCCTGTCTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156097.2
CDS-3UTR CAA 90 bp GCTGTCCAAATGGTCTCTGTCCTTGGAACGTGCCCTTGGGGCAGCTCCTACTGGGTAGGAGATGATCGATaGCAGGAGCGTGTACACCAC +
Preference number: 5 (lower is better)
Translates to: AVQMVSVLGTCPWGSSYWVGDDR*QERVHH
Trigger: GTGGTGTACACGCTCCTGCAATCGATCATCTCCTAC...CCAGTAGGAGCTGCCCCAAGGGCACGTTCCAAGGACAGAGACCATTTGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020249.2
CDS-3UTR CAA 90 bp GGCCCACAGGCATTGATAGGAGCAGATAAACAGCAGCCCACATCTGGAAGTTTCGGATTCCATTCCAGCTaGGTTATAGAAATGAGTGAA +
Preference number: 5 (lower is better)
Translates to: GPQALIGADKQQPTSGSFGFHSS*VIEMSE
Trigger: TTCACTCATTTCTATAACCAAGCTGGAATGGAATCC...GAAACTTCCAGATGTGGGCTGCTGTTTATCTGCTCCTATCAATGCCTGTGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020249.2
CDS-3UTR CAA 90 bp GCAAAGAACAGCATGCATTCAGTCCGCCCCAGCTTCCACAGGAAATGTATCGACTATAATCCTTTTCTTTaGGATTCCATTCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: AKNSMHSVRPSFHRKCIDYNPFL*DSIPAW
Trigger: CCAAGCTGGAATGGAATCCAAAAGAAAAGGATTATA...GTCGATACATTTCCTGTGGAAGCTGGGGCGGACTGAATGCATGCTGTTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020249.2
CDS CCA 72 bp AGAGAAGTTTATCATGAATCCAAAAATACCACTCTCTaGAGGAGTTGTTCCTGTGTCACTGATATAGGGGAG +
Preference number: 6 (lower is better)
Translates to: REVYHESKNTTL*RSCSCVTDIGE
Trigger: CTCCCCTATATCAGTGACACAGGAACAACTCCTCCAGAGAGTGGTATTTTTGGATTCATGATAAACTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020249.2