Pregenerated sensors for DR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029265Ensembl transcript IDs: ENSMUST00000031190.5
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCATTACTGAACTGGAGTaGAACAGTAAGAATTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: PNTLDPSHKHYHTLCTGTITELE*NSKNCD Trigger: GTCACAATTCTTACTGTTTCACTCCAGTTCAGTAAT...GGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| 3UTR-3UTR CCA 90 bp | AATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCAAAAGCCAGTCTCTGAAATaGCATAGTGTAGTTCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: NTLDPSHKHYHTLCTGTKSQSLK*HSVVQD Trigger: ATCTTGAACTACACTATGCCATTTCAGAGACTGGCT...TTTGGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| 3UTR-3UTR TCA 90 bp | AATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCAAAACTTTTTCACCAACCTaGTTCAATGTATTCTGCATC | + |
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Preference number: 2 (lower is better) Translates to: NTLDPSHKHYHTLCTGTKTFSPT*FNVFCI Trigger: GATGCAGAATACATTGAATCAGGTTGGTGAAAAAGT...TTTGGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| 3UTR-3UTR CAA 90 bp | CCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCTCTTTCACTGTTTTCTaGAAAGCCCAGGTGGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: PNTLDPSHKHYHTLCTGTSFTVF*KAQVVN Trigger: ATTCACCACCTGGGCTTTCAAGAAAACAGTGAAAGA...GGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| 3UTR-3UTR CAA 90 bp | AATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCAAATCCCCTAGCAAAGGTTaGAATATCCAGCAACCTCAG | + |
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Preference number: 3 (lower is better) Translates to: NTLDPSHKHYHTLCTGTKSPSKG*NIQQPQ Trigger: CTGAGGTTGCTGGATATTCAAACCTTTGCTAGGGGA...TTTGGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| 3UTR-3UTR CAA 90 bp | CCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCTATCAAAAGTTAGCATaGGATTCTTTAGGCCACCTA | + |
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Preference number: 3 (lower is better) Translates to: PNTLDPSHKHYHTLCTGTYQKLA*DSLGHL Trigger: TAGGTGGCCTAAAGAATCCAATGCTAACTTTTGATA...GGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| 3UTR CCA 72 bp | CAAAATATAAGTAATATGCCATTTCACCAAATACACTaGATCCCTCTCACAAACACTACCACACTTTATGCA | + |
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Preference number: 3 (lower is better) Translates to: QNISNMPFHQIH*IPLTNTTTLYA Trigger: TGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGGTGAAATGGCATATTACTTATATTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR TCA 90 bp | ACCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACAGTGGACGCGCTGGCTaGGGCTGCAGCCAGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: TKYTGSLSQTLPHFMHWNSGRAG*GCSQLG Trigger: GCCCAGCTGGCTGCAGCCTCAGCCAGCGCGTCCACT...GTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR CCA 90 bp | AATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCAAACTTGAGTGGACGCGCTaGCTGAGGCTGCAGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: NTLDPSHKHYHTLCTGTKLEWTR*LRLQPA Trigger: AGCTGGCTGCAGCCTCAGCCAGCGCGTCCACTCAAG...TTTGGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR CCA 90 bp | CCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCAAGATCCTGCTTGAGTaGACGCGCTGGCTGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PNTLDPSHKHYHTLCTGTKILLE*TRWLRL Trigger: CAGCCTCAGCCAGCGCGTCCACTCAAGCAGGATCTT...GGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR GCA 90 bp | CCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCCTGGGCTTGTTGAGCTaGTTGCTGCATTTGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PNTLDPSHKHYHTLCTGTLGLLS*LLHLKP Trigger: TGGCTTCAAATGCAGCAAGCAGCTCAACAAGCCCAG...GGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR TCA 90 bp | CCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCTCAGAAGATATAAGGTaGATGAATTCCGTGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PNTLDPSHKHYHTLCTGTSEDIR*MNSVQQ Trigger: CTGCTGCACGGAATTCATTCACCTTATATCTTCTGA...GGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR TCA 90 bp | CCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCCTTCTTTTACTTCACTaGTGTAAGAGCCAAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PNTLDPSHKHYHTLCTGTLLLLH*CKSQSP Trigger: TGGGCTTTGGCTCTTACATCAGTGAAGTAAAAGAAG...GGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR GCA 90 bp | ACCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACATTCCTCTTCAGGAATaGCGAGGTTTTCCAAACGAG | + |
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Preference number: 4 (lower is better) Translates to: TKYTGSLSQTLPHFMHWNIPLQE*RGFPNE Trigger: CTCGTTTGGAAAACCTCGGCATTCCTGAAGAGGAAT...GTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR GCA 90 bp | ACCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCTGTTGGGCCAATTCTaGTTGTTGCTGTCTAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: TKYTGSLSQTLPHFMHWNLLGQF*LLLSSF Trigger: AAAGCTAGACAGCAACAAGCAGAATTGGCCCAACAG...GTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR TCA 90 bp | AATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCAAAATCTTCTTCGTCTTGTaGAGATCCTGCTTGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: NTLDPSHKHYHTLCTGTKIFFVL*RSCLSG Trigger: TCCACTCAAGCAGGATCTTCACAAGACGAAGAAGAT...TTTGGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR GCA 90 bp | ACCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACGCCAATTCTGCTTGTTaGTGTCTAGCTTTTGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: TKYTGSLSQTLPHFMHWNANSAC*CLAFAN Trigger: ATTTGCAAAAGCTAGACAGCAACAAGCAGAATTGGC...GTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR CCA 90 bp | CCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCTTTCCAAACGAGAACTaGCCTTTCTTCTTTTTAATG | + |
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Preference number: 4 (lower is better) Translates to: PNTLDPSHKHYHTLCTGTFPNEN*PFFFLM Trigger: CATTAAAAAGAAGAAAGGCCAGTTCTCGTTTGGAAA...GGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR CAA 90 bp | CCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCAGCTCTCGGGCATCGTaGGCCACCCGGACATTAGGA | + |
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Preference number: 5 (lower is better) Translates to: PNTLDPSHKHYHTLCTGTSSRAS*ATRTLG Trigger: TCCTAATGTCCGGGTGGCCAACGATGCCCGAGAGCT...GGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR CAA 90 bp | ACCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACAGCCAGCTGGGCTTGTaGAGCTGCTTGCTGCATTTG | + |
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Preference number: 5 (lower is better) Translates to: TKYTGSLSQTLPHFMHWNSQLGL*SCLLHL Trigger: CAAATGCAGCAAGCAGCTCAACAAGCCCAGCTGGCT...GTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR CAA 90 bp | ACCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACAGCTGCTTGCTGCATTaGAAGCCATTCCTGTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: TKYTGSLSQTLPHFMHWNSCLLH*KPFLLG Trigger: GCCCAACAGGAATGGCTTCAAATGCAGCAAGCAGCT...GTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR CAA 90 bp | CCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCGGCTTGTTGAGCTGCTaGCTGCATTTGAAGCCATTC | + |
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Preference number: 5 (lower is better) Translates to: PNTLDPSHKHYHTLCTGTGLLSC*LHLKPF Trigger: GAATGGCTTCAAATGCAGCAAGCAGCTCAACAAGCC...GGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR CAA 90 bp | CCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCTTGGGCCAATTCTGCTaGTTGCTGTCTAGCTTTTGC | + |
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Preference number: 5 (lower is better) Translates to: PNTLDPSHKHYHTLCTGTLGQFC*LLSSFC Trigger: GCAAAAGCTAGACAGCAACAAGCAGAATTGGCCCAA...GGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR CAA 90 bp | CCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCTTGAAGCCATTCCTGTaGGGCCAATTCTGCTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: PNTLDPSHKHYHTLCTGTLKPFL*GQFCLL Trigger: CAACAAGCAGAATTGGCCCAACAGGAATGGCTTCAA...GGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR CAA 90 bp | ACCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACGGCCAATTCTGCTTGTaGCTGTCTAGCTTTTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: TKYTGSLSQTLPHFMHWNGQFCL*LSSFCK Trigger: TTTGCAAAAGCTAGACAGCAACAAGCAGAATTGGCC...GTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR CAA 90 bp | CCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACCGTCTTCTTTTCTGACTaGTTACAAATCTCGTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: PNTLDPSHKHYHTLCTGTVFFSD*LQISLA Trigger: AGCCAACGAGATTTGTAACAAGTCAGAAAAGAAGAC...GGTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS-3UTR CAA 90 bp | ACCAAATACACTGGATCCCTCTCACAAACACTACCACACTTTATGCACTGGAACTTGTTACAAATCTCGTaGGCTTCAGAAGATATAAGG | + |
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Preference number: 5 (lower is better) Translates to: TKYTGSLSQTLPHFMHWNLLQIS*ASEDIR Trigger: CCTTATATCTTCTGAAGCCAACGAGATTTGTAACAA...GTTCCAGTGCATAAAGTGTGGTAGTGTTTGTGAGAGGGATCCAGTGTATTTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS GCA 90 bp | TTGCAAATAATTCCTGTTGCTGTCTCAATAATTCCTCTTCAGGAATaGCGAGGTTTTCCAAACGAGAACTGGCCTTTCTTCTTTTTAATG | + |
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Preference number: 5 (lower is better) Translates to: LQIIPVAVSIIPLQE*RGFPNENWPFFFLM Trigger: CATTAAAAAGAAGAAAGGCCAGTTCTCGTTTGGAAAACCTCGGCATTCCTGAAGAGGAATTATTGAGACAGCAACAGGAATTATTTGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS CCA 72 bp | CTTCGTCTTGTGAAGATCCTGCTTGAGTGGACGCGCTaGCTGAGGCTGCAGCCAGCTGGGCTTGTTGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRLVKILLEWTR*LRLQPAGLVEL Trigger: CAGCTCAACAAGCCCAGCTGGCTGCAGCCTCAGCCAGCGCGTCCACTCAAGCAGGATCTTCACAAGACGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS CAA 72 bp | TCCGTGCAGCAGTTCACTACCAGCTCTCGGGCATCGTaGGCCACCCGGACATTAGGAAGAGTCTCTTTGATC | + |
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Preference number: 6 (lower is better) Translates to: SVQQFTTSSRAS*ATRTLGRVSLI Trigger: GATCAAAGAGACTCTTCCTAATGTCCGGGTGGCCAACGATGCCCGAGAGCTGGTAGTGAACTGCTGCACGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS CAA 90 bp | AGCTCTCGGGCATCGTTGGCCACCCGGACATTAGGAAGAGTCTCTTaGATCATCTTATTTATAGCAGCTCTGGGGATAGTGAGATCATCG | + |
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Preference number: 6 (lower is better) Translates to: SSRASLATRTLGRVS*IILFIAALGIVRSS Trigger: CGATGATCTCACTATCCCCAGAGCTGCTATAAATAAGATGATCAAAGAGACTCTTCCTAATGTCCGGGTGGCCAACGATGCCCGAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS CAA 72 bp | GCATCGTTGGCCACCCGGACATTAGGAAGAGTCTCTTaGATCATCTTATTTATAGCAGCTCTGGGGATAGTG | + |
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Preference number: 6 (lower is better) Translates to: ASLATRTLGRVS*IILFIAALGIV Trigger: CACTATCCCCAGAGCTGCTATAAATAAGATGATCAAAGAGACTCTTCCTAATGTCCGGGTGGCCAACGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS CAA 72 bp | TTGTTGAGCTGCTTGCTGCATTTGAAGCCATTCCTGTaGGGCCAATTCTGCTTGTTGCTGTCTAGCTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: LLSCLLHLKPFL*GQFCLLLSSFC Trigger: GCAAAAGCTAGACAGCAACAAGCAGAATTGGCCCAACAGGAATGGCTTCAAATGCAGCAAGCAGCTCAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS GCA 72 bp | ATTCCTGTTGCTGTCTCAATAATTCCTCTTCAGGAATaGCGAGGTTTTCCAAACGAGAACTGGCCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: IPVAVSIIPLQE*RGFPNENWPFF Trigger: GAAGAAAGGCCAGTTCTCGTTTGGAAAACCTCGGCATTCCTGAAGAGGAATTATTGAGACAGCAACAGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS CCA 72 bp | CCTCTTCAGGAATGCCGAGGTTTTCCAAACGAGAACTaGCCTTTCTTCTTTTTAATGCTACTGTCTTGCATT | + |
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Preference number: 6 (lower is better) Translates to: PLQECRGFPNEN*PFFFLMLLSCI Trigger: AATGCAAGACAGTAGCATTAAAAAGAAGAAAGGCCAGTTCTCGTTTGGAAAACCTCGGCATTCCTGAAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS TCA 72 bp | TTGTTACAAATCTCGTTGGCTTCAGAAGATATAAGGTaGATGAATTCCGTGCAGCAGTTCACTACCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LLQISLASEDIR*MNSVQQFTTSS Trigger: AGAGCTGGTAGTGAACTGCTGCACGGAATTCATTCACCTTATATCTTCTGAAGCCAACGAGATTTGTAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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| CDS TCA 72 bp | CTGTCTTGCATTCTTGTAAGACTTCTTTTACTTCACTaGTGTAAGAGCCAAAGCCCAAACTTTCCAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LSCILVRLLLLH*CKSQSPNFPVL Trigger: AAGCACTGGAAAGTTTGGGCTTTGGCTCTTACATCAGTGAAGTAAAAGAAGTCTTACAAGAATGCAAGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031190.5 |
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