Pregenerated sensors for DQX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009145Ensembl transcript IDs: ENSMUST00000077502.5, ENSMUST00000204803.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGCGCCGCATGGGTGGGGTGAGTGGCATCTGCTCCCATGTCCATaGACAGAGAAGAAAAGTATGCTTGTTCTGAACTGTGGCGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: EAPHGWGEWHLLPCP*TEKKSMLVLNCGAL Trigger: GAGAGCGCCACAGTTCAGAACAAGCATACTTTTCTTCTCTGTCCATGGACATGGGAGCAGATGCCACTCACCCCACCCATGCGGCGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR TCA 90 bp | GCTGACACACCAGAAGAGGGTACTGGATCCAATTACAGATGGTCATaGGCCACCATGTGGTTGCTGGGAATTGAACTCATGACCTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: ADTPEEGTGSNYRWS*ATMWLLGIELMTSG Trigger: TCCAGAGGTCATGAGTTCAATTCCCAGCAACCACATGGTGGCTCATGACCATCTGTAATTGGATCCAGTACCCTCTTCTGGTGTGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR CCA 90 bp | CCCATGTCCATGGACAGAGAAGAAAAGTATGCTTGTTCTGAACTGTaGCGCTCTCTTCCCCCACTCCTAACAGTTCTTGGCTCTTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: PMSMDREEKYACSEL*RSLPPLLTVLGSWV Trigger: AACCCAAGAGCCAAGAACTGTTAGGAGTGGGGGAAGAGAGCGCCACAGTTCAGAACAAGCATACTTTTCTTCTCTGTCCATGGACATGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR-3UTR TCA 90 bp | CGCCGCATGGGTGGGGTGAGTGGCATCTGCTCCCATGTCCATGGACAGAGAAGATTCCAGGAGTATATCTaGCCCTACACTTTGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: RRMGGVSGICSHVHGQRRFQEYI*PYTLGL Trigger: GAGACCCAAAGTGTAGGGTCAGATATACTCCTGGAA...TCTTCTCTGTCCATGGACATGGGAGCAGATGCCACTCACCCCACCCATGCGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR-3UTR TCA 90 bp | TCGGCCTTTCCTTTTGTGTCACCTCTGACTCATGGATGTTGTATATGGCACTACGCCGCATGGGTGGGGTaGGTGGCATCTGCTCCCATG | + |
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Preference number: 2 (lower is better) Translates to: SAFPFVSPLTHGCCIWHYAAWVG*VASAPM Trigger: CATGGGAGCAGATGCCACTCACCCCACCCATGCGGC...GTAGTGCCATATACAACATCCATGAGTCAGAGGTGACACAAAAGGAAAGGCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR-3UTR CCA 90 bp | GTGTCACCTCTGACTCATGGATGTTGTATATGGCACTACAGAACTAAAAATCAACATGGGTGGGGTGAGTaGCATCTGCTCCCATGTCCA | + |
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Preference number: 2 (lower is better) Translates to: VSPLTHGCCIWHYRTKNQHGWGE*HLLPCP Trigger: TGGACATGGGAGCAGATGCCACTCACCCCACCCATG...TTGATTTTTAGTTCTGTAGTGCCATATACAACATCCATGAGTCAGAGGTGACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR-3UTR CCA 90 bp | GTGTCACCTCTGACTCATGGATGTTGTATATGGCACTACAGAACTAAAAATCAAACTCCTAACAGTTCTTaGCTCTTGGGTTCCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: VSPLTHGCCIWHYRTKNQTPNSS*LLGSRS Trigger: ACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGT...TTGATTTTTAGTTCTGTAGTGCCATATACAACATCCATGAGTCAGAGGTGACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR GCA 72 bp | TGTGTGAGGCGCCGCATGGGTGGGGTGAGTGGCATCTaGTCCCATGTCCATGGACAGAGAAGAAAAGTATGC | + |
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Preference number: 3 (lower is better) Translates to: CVRRRMGGVSGI*SHVHGQRRKVC Trigger: GCATACTTTTCTTCTCTGTCCATGGACATGGGAGCAGATGCCACTCACCCCACCCATGCGGCGCCTCACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR CCA 72 bp | ACAAGGTTGTGTGAGGCGCCGCATGGGTGGGGTGAGTaGCATCTGCTCCCATGTCCATGGACAGAGAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: TRLCEAPHGWGE*HLLPCPWTEKK Trigger: TTTCTTCTCTGTCCATGGACATGGGAGCAGATGCCACTCACCCCACCCATGCGGCGCCTCACACAACCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR TCA 72 bp | CATGAGCCACCATGTGGTTGCTGGGAATTGAACTCATaGCCTCTGGAAGAGCAGTCAGTGAGTGCTCTTAAC | + |
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Preference number: 3 (lower is better) Translates to: HEPPCGCWELNS*PLEEQSVSALN Trigger: GTTAAGAGCACTCACTGACTGCTCTTCCAGAGGTCATGAGTTCAATTCCCAGCAACCACATGGTGGCTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR TCA 72 bp | CATGTCCATGGACAGAGAAGAAAAGTATGCTTGTTCTaGACTGTGGCGCTCTCTTCCCCCACTCCTAACAGT | + |
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Preference number: 3 (lower is better) Translates to: HVHGQRRKVCLF*TVALSSPTPNS Trigger: ACTGTTAGGAGTGGGGGAAGAGAGCGCCACAGTTCAGAACAAGCATACTTTTCTTCTCTGTCCATGGACATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR TCA 72 bp | CCAGAAGAGGGTACTGGATCCAATTACAGATGGTCATaGGCCACCATGTGGTTGCTGGGAATTGAACTCATG | + |
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Preference number: 3 (lower is better) Translates to: PEEGTGSNYRWS*ATMWLLGIELM Trigger: CATGAGTTCAATTCCCAGCAACCACATGGTGGCTCATGACCATCTGTAATTGGATCCAGTACCCTCTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR CCA 72 bp | ATGGACAGAGAAGAAAAGTATGCTTGTTCTGAACTGTaGCGCTCTCTTCCCCCACTCCTAACAGTTCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: MDREEKYACSEL*RSLPPLLTVLG Trigger: GCCAAGAACTGTTAGGAGTGGGGGAAGAGAGCGCCACAGTTCAGAACAAGCATACTTTTCTTCTCTGTCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR-3UTR CAA 90 bp | ACCATGTGGTTGCTGGGAATTGAACTCATGACCTCTGGAAGAGCAGTCAGTGAGAACAGTTCTTGGCTCTaGGGTTCCAGGAGTATATCT | + |
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Preference number: 3 (lower is better) Translates to: TMWLLGIELMTSGRAVSENSSWL*GSRSIS Trigger: AGATATACTCCTGGAACCCAAGAGCCAAGAACTGTT...CTCACTGACTGCTCTTCCAGAGGTCATGAGTTCAATTCCCAGCAACCACATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR-3UTR CAA 90 bp | ATTTATTTATTTAATGTATATGAGCACACTGTAGCTGACACACCAGAAGAGGGTCTAAGTCTGACTGCCTaGGCGCTCTCTGATGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: IYLFNVYEHTVADTPEEGLSLTA*ALSDEV Trigger: AACCTCATCAGAGAGCGCCAAGGCAGTCAGACTTAG...ACCCTCTTCTGGTGTGTCAGCTACAGTGTGCTCATATACATTAAATAAATAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | CGCCGCATGGGTGGGGTGAGTGGCATCTGCTCCCATGTCCATGGACAGAGAAGACCGCGGTGGAGGCCCTaGGACAGCCAGCGTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: RRMGGVSGICSHVHGQRRPRWRP*DSQRSH Trigger: ATGGGAACGCTGGCTGTCCCAGGGCCTCCACCGCGG...TCTTCTCTGTCCATGGACATGGGAGCAGATGCCACTCACCCCACCCATGCGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | CGCCGCATGGGTGGGGTGAGTGGCATCTGCTCCCATGTCCATGGACAGAGAAGAGCTGTGATCACCGTCTaGGTGTTCCAGAGCCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: RRMGGVSGICSHVHGQRRAVITV*VFQSPA Trigger: CGCCGGGCTCTGGAACACGCAGACGGTGATCACAGC...TCTTCTCTGTCCATGGACATGGGAGCAGATGCCACTCACCCCACCCATGCGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | CGCCGCATGGGTGGGGTGAGTGGCATCTGCTCCCATGTCCATGGACAGAGAAGAGGCCGGTCCAGGAAGTaGCATTCCCCTGGCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RRMGGVSGICSHVHGQRRGRSRK*HSPGSA Trigger: TGCAGAGCCAGGGGAATGCCACTTCCTGGACCGGCC...TCTTCTCTGTCCATGGACATGGGAGCAGATGCCACTCACCCCACCCATGCGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | CGCCGCATGGGTGGGGTGAGTGGCATCTGCTCCCATGTCCATGGACAGAGAAGAGGAAGTTTCAGTCGCTaGTGCTGGTGGCTCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RRMGGVSGICSHVHGQRRGSFSR*CWWLCC Trigger: ACAGCAGAGCCACCAGCAGCAGCGACTGAAACTTCC...TCTTCTCTGTCCATGGACATGGGAGCAGATGCCACTCACCCCACCCATGCGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | CGCCGCATGGGTGGGGTGAGTGGCATCTGCTCCCATGTCCATGGACAGAGAAGACTGTCTGGAATCCTCTaGCCAGCGCAAACTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: RRMGGVSGICSHVHGQRRLSGIL*PAQTLH Trigger: GTGCAGAGTTTGCGCTGGCCAGAGGATTCCAGACAG...TCTTCTCTGTCCATGGACATGGGAGCAGATGCCACTCACCCCACCCATGCGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | CCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTGACCCTACAAGGCCAGCAGGGCTTTaGCCAGCTCCGGGGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PTPNSSWLLGSRSISDPTRPAGL*PAPGAG Trigger: CCCTGCCCCCGGAGCTGGCCAAAGCCCTGCTGGCCT...TGTAGGGTCAGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR TCA 90 bp | CGCCGCATGGGTGGGGTGAGTGGCATCTGCTCCCATGTCCATGGACAGAGAAGATTTAGACCCCGAGCCTaGCACCAAGCTTCATCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RRMGGVSGICSHVHGQRRFRPRA*HQASSA Trigger: AGCAGATGAAGCTTGGTGTCAGGCTCGGGGTCTAAA...TCTTCTCTGTCCATGGACATGGGAGCAGATGCCACTCACCCCACCCATGCGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | CCCATGTCCATGGACAGAGAAGAAAAGTATGCTTGTTCTGAACTGTGGCGCTCTCAGCACCCACGTGGGTaGCTGGGCTGGAGTCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: PMSMDREEKYACSELWRSQHPRG*LGWSPA Trigger: CGCAGGACTCCAGCCCAGCCACCCACGTGGGTGCTG...AGAGCGCCACAGTTCAGAACAAGCATACTTTTCTTCTCTGTCCATGGACATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | GGGTCTCTAAGTCTGACTGCCTTGGCGCTCTCTGATGAGGTTTGGCTCCATTCCACTGAGGAATCTGGGTaGTCTTGCCAGAGCCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: GSLSLTALALSDEVWLHSTEESG*SCQSQG Trigger: ACCCTGGCTCTGGCAAGAGCACCCAGATTCCTCAGT...GGAATGGAGCCAAACCTCATCAGAGAGCGCCAAGGCAGTCAGACTTAGAGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | GGGTCTCTAAGTCTGACTGCCTTGGCGCTCTCTGATGAGGTTTGGCTCCATTCCGTAACCTGTCCTGTCTaGAATCCTCTGGCCAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: GSLSLTALALSDEVWLHSVTCPV*NPLASA Trigger: TGCGCTGGCCAGAGGATTCCAGACAGGACAGGTTAC...GGAATGGAGCCAAACCTCATCAGAGAGCGCCAAGGCAGTCAGACTTAGAGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCCCCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTACCCACGTGGGTGGCTaGGCTGGAGTCCTGCGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LSSPTPNSSWLLGSRSISTHVGG*AGVLRF Trigger: AAACCGCAGGACTCCAGCCCAGCCACCCACGTGGGT...AGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGGGGAAGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | GAACTGTGGCGCTCTCTTCCCCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGAGATGGAGAAGCTGTaGTACAGCACCCACGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: ELWRSLPPLLTVLGSWVPEMEKL*YSTHVG Trigger: ACCCACGTGGGTGCTGTACCACAGCTTCTCCATCTC...TGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGGGGAAGAGAGCGCCACAGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | GAACTGTGGCGCTCTCTTCCCCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGTTACTCAGGAAGTATaGAGGGGCGAGCTCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: ELWRSLPPLLTVLGSWVPVTQEV*RGELHQ Trigger: CTGGTGGAGCTCGCCCCTCCATACTTCCTGAGTAAC...TGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGGGGAAGAGAGCGCCACAGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | GAACTGTGGCGCTCTCTTCCCCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAAGTCGCTGCTGCTGGTaGCTCTGCTGTTCCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ELWRSLPPLLTVLGSWVPSRCCW*LCCSFS Trigger: AGAGAAGGAACAGCAGAGCCACCAGCAGCAGCGACT...TGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGGGGAAGAGAGCGCCACAGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | ACCATGTGGTTGCTGGGAATTGAACTCATGACCTCTGGAAGAGCAGTCAGTGAGGAATCTGGGTGCTCTTaGCAGAGCCAGGGTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TMWLLGIELMTSGRAVSEESGCS*QSQGPQ Trigger: CTGGGGACCCTGGCTCTGGCAAGAGCACCCAGATTC...CTCACTGACTGCTCTTCCAGAGGTCATGAGTTCAATTCCCAGCAACCACATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | TCGGCCTTTCCTTTTGTGTCACCTCTGACTCATGGATGTTGTATATGGCACTACGGTACAGCACCCACGTaGGTGGCTGGGCTGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SAFPFVSPLTHGCCIWHYGTAPT*VAGLES Trigger: GGACTCCAGCCCAGCCACCCACGTGGGTGCTGTACC...GTAGTGCCATATACAACATCCATGAGTCAGAGGTGACACAAAAGGAAAGGCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR TCA 90 bp | CCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTGACCCTACAGGTGCCTCTTCCTGCTaGCACAGCTCAAGCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: PTPNSSWLLGSRSISDPTGASSC*HSSSTA Trigger: AGCTGTGCTTGAGCTGTGTCAGCAGGAAGAGGCACC...TGTAGGGTCAGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | GAACTGTGGCGCTCTCTTCCCCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAAGTCTTGCCTCTGCCTaGCACTTGCTAATTGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: ELWRSLPPLLTVLGSWVPSLASA*HLLIGL Trigger: GAGACCAATTAGCAAGTGCCAGGCAGAGGCAAGACT...TGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGGGGAAGAGAGCGCCACAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | CCCATGTCCATGGACAGAGAAGAAAAGTATGCTTGTTCTGAACTGTGGCGCTCTTCACACACTTTGGGGTaGGGCAGTGGGGGAGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PMSMDREEKYACSELWRSSHTLG*GSGGAS Trigger: AGAGGCTCCCCCACTGCCCCACCCCAAAGTGTGTGA...AGAGCGCCACAGTTCAGAACAAGCATACTTTTCTTCTCTGTCCATGGACATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCCCCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTTCTCTTCACACACTTTaGGGTGGGGCAGTGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSSPTPNSSWLLGSRSISSLHTL*GGAVGE Trigger: CTCCCCCACTGCCCCACCCCAAAGTGTGTGAAGAGA...AGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGGGGAAGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | GGGTCTCTAAGTCTGACTGCCTTGGCGCTCTCTGATGAGGTTTGGCTCCATTCCGAAGTGGCATTCCCCTaGCTCTGCAATCTGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GSLSLTALALSDEVWLHSEVAFP*LCNLFP Trigger: AGGAAACAGATTGCAGAGCCAGGGGAATGCCACTTC...GGAATGGAGCCAAACCTCATCAGAGAGCGCCAAGGCAGTCAGACTTAGAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR CAA 72 bp | ACCAAAGTCTTTTATAGTCTCACCAAGGAGACAAGGTaGTGTGAGGCGCCGCATGGGTGGGGTGAGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: TKVFYSLTKETR*CEAPHGWGEWH Trigger: ATGCCACTCACCCCACCCATGCGGCGCCTCACACAACCTTGTCTCCTTGGTGAGACTATAAAAGACTTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR TCA 90 bp | CATGGGTGGGGTGAGTGGCATCTGCTCCCATGTCCATGGACAGAGAAGAAAAGTCCAGTCCTGAGTCAATaGCGTGTTGGATGGAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: HGWGEWHLLPCPWTEKKSPVLSQ*RVGWKE Trigger: TTCCTTCCATCCAACACGTCATTGACTCAGGACTGG...ACTTTTCTTCTCTGTCCATGGACATGGGAGCAGATGCCACTCACCCCACCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | CCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTGACCCTACAGGCCAGCGCAAACTCTaGACACCACTGAGGAATCTG | + |
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Preference number: 4 (lower is better) Translates to: PTPNSSWLLGSRSISDPTGQRKL*TPLRNL Trigger: CAGATTCCTCAGTGGTGTGCAGAGTTTGCGCTGGCC...TGTAGGGTCAGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | CTCTCTTCCCCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTAGTTTCAGTCGCTGCTaGTGGTGGCTCTGCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LSSPTPNSSWLLGSRSISSFSRC*WWLCCS Trigger: GGAACAGCAGAGCCACCAGCAGCAGCGACTGAAACT...AGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGGGGAAGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | ACCATGTGGTTGCTGGGAATTGAACTCATGACCTCTGGAAGAGCAGTCAGTGAGCCAGCACCACTCCAGTaGGGCTACTCTCCAAATGCT | + |
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Preference number: 4 (lower is better) Translates to: TMWLLGIELMTSGRAVSEPAPLQ*GYSPNA Trigger: AGCATTTGGAGAGTAGCCCCACTGGAGTGGTGCTGG...CTCACTGACTGCTCTTCCAGAGGTCATGAGTTCAATTCCCAGCAACCACATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCCCCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTCACCAGCACATCTCCTaGTGCCTCTTCCTGCTGACA | + |
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Preference number: 4 (lower is better) Translates to: LSSPTPNSSWLLGSRSISHQHIS*CLFLLT Trigger: TGTCAGCAGGAAGAGGCACCAGGAGATGTGCTGGTG...AGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGGGGAAGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | ACCATGTGGTTGCTGGGAATTGAACTCATGACCTCTGGAAGAGCAGTCAGTGAGGGTCTCTGCTCTCACTaGGGGGCAAGTTACTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TMWLLGIELMTSGRAVSEGLCSH*GASYSG Trigger: TCCTGAGTAACTTGCCCCCCAGTGAGAGCAGAGACC...CTCACTGACTGCTCTTCCAGAGGTCATGAGTTCAATTCCCAGCAACCACATGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | ACCATGTGGTTGCTGGGAATTGAACTCATGACCTCTGGAAGAGCAGTCAGTGAGTTCAGTCGCTGCTGCTaGTGGCTCTGCTGTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TMWLLGIELMTSGRAVSEFSRCC*WLCCSF Trigger: GAAGGAACAGCAGAGCCACCAGCAGCAGCGACTGAA...CTCACTGACTGCTCTTCCAGAGGTCATGAGTTCAATTCCCAGCAACCACATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR TCA 90 bp | CCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTGACCCTACAAACTCTGCACACCACTaGGGAATCTGGGTGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: PTPNSSWLLGSRSISDPTNSAHH*GIWVLL Trigger: CAAGAGCACCCAGATTCCTCAGTGGTGTGCAGAGTT...TGTAGGGTCAGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR TCA 90 bp | ACCATGTGGTTGCTGGGAATTGAACTCATGACCTCTGGAAGAGCAGTCAGTGAGCTGTATCCAATCTCATaGCCCAGGGTCAGGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: TMWLLGIELMTSGRAVSELYPIS*PRVRSI Trigger: GATGGACCTGACCCTGGGTCATGAGATTGGATACAG...CTCACTGACTGCTCTTCCAGAGGTCATGAGTTCAATTCCCAGCAACCACATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR TCA 90 bp | TCGGCCTTTCCTTTTGTGTCACCTCTGACTCATGGATGTTGTATATGGCACTACTGTCCCAGCAAAACCTaGGCATGGTGTTGGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SAFPFVSPLTHGCCIWHYCPSKT*AWCWAQ Trigger: CTGGGCCCAACACCATGCTCAGGTTTTGCTGGGACA...GTAGTGCCATATACAACATCCATGAGTCAGAGGTGACACAAAAGGAAAGGCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR TCA 90 bp | CATGGGTGGGGTGAGTGGCATCTGCTCCCATGTCCATGGACAGAGAAGAAAAGTACGAAGTTCCAGTCCTaGGTCAATGACGTGTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HGWGEWHLLPCPWTEKKSTKFQS*VNDVLD Trigger: ATCCAACACGTCATTGACTCAGGACTGGAACTTCGT...ACTTTTCTTCTCTGTCCATGGACATGGGAGCAGATGCCACTCACCCCACCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR TCA 90 bp | CCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTGACCCTACAGCATGGCAGCCAGAGTaGGCATTTCATCCACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PTPNSSWLLGSRSISDPTAWQPE*AFHPHS Trigger: ACTGTGTGGATGAAATGCTCACTCTGGCTGCCATGC...TGTAGGGTCAGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR TCA 90 bp | CCCATGTCCATGGACAGAGAAGAAAAGTATGCTTGTTCTGAACTGTGGCGCTCTTGGATCAGAGAGCTGTaGTCACCGTCTGCGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PMSMDREEKYACSELWRSWIREL*SPSACS Trigger: GGAACACGCAGACGGTGATCACAGCTCTCTGATCCA...AGAGCGCCACAGTTCAGAACAAGCATACTTTTCTTCTCTGTCCATGGACATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | GGGTCTCTAAGTCTGACTGCCTTGGCGCTCTCTGATGAGGTTTGGCTCCATTCCAGTCTTCCTGAGGGATaGTGTATCCAATCTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSLSLTALALSDEVWLHSSLPEG*CIQSHD Trigger: GTCATGAGATTGGATACAGCATCCCTCAGGAAGACT...GGAATGGAGCCAAACCTCATCAGAGAGCGCCAAGGCAGTCAGACTTAGAGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | TCGGCCTTTCCTTTTGTGTCACCTCTGACTCATGGATGTTGTATATGGCACTACTGCCCGAAGCAGTCTTaGCTCTGCCTGGCACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAFPFVSPLTHGCCIWHYCPKQS*LCLALA Trigger: AGCAAGTGCCAGGCAGAGGCAAGACTGCTTCGGGCA...GTAGTGCCATATACAACATCCATGAGTCAGAGGTGACACAAAAGGAAAGGCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | CATGGGTGGGGTGAGTGGCATCTGCTCCCATGTCCATGGACAGAGAAGAAAAGTCTTTCTGAAGGTCTCTaGGATTCTGCTCAGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HGWGEWHLLPCPWTEKKSLSEGL*DSAQSQ Trigger: TTGGCTCTGAGCAGAATCGCAGAGACCTTCAGAAAG...ACTTTTCTTCTCTGTCCATGGACATGGGAGCAGATGCCACTCACCCCACCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | CCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTGACCCTACATGGGCACACGCACAATaGGAGAATTGCCCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTPNSSWLLGSRSISDPTWAHAQ*ENCPRK Trigger: CTTTCTGGGGCAATTCTCCCATTGTGCGTGTGCCCA...TGTAGGGTCAGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| 3UTR CAA 72 bp | CTGACCCTACACTTTGGGTCTCTAAGTCTGACTGCCTaGGCGCTCTCTGATGAGGTTTGGCTCCATTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LTLHFGSLSLTA*ALSDEVWLHSL Trigger: TAAGGAATGGAGCCAAACCTCATCAGAGAGCGCCAAGGCAGTCAGACTTAGAGACCCAAAGTGTAGGGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR TCA 90 bp | ATGGACAGAGAAGAAAAGTATGCTTGTTCTGAACTGTGGCGCTCTCTTCCCCCAGACAGCAGTGCTTTCTaGAGGTCTCTGCGATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MDREEKYACSELWRSLPPDSSAF*RSLRFC Trigger: GCAGAATCGCAGAGACCTTCAGAAAGCACTGCTGTC...TGGGGGAAGAGAGCGCCACAGTTCAGAACAAGCATACTTTTCTTCTCTGTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | ACCATGTGGTTGCTGGGAATTGAACTCATGACCTCTGGAAGAGCAGTCAGTGAGGGGCTACTCTCCAAATaGTCCAAGAACAGGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TMWLLGIELMTSGRAVSEGLLSK*SKNRKR Trigger: TCGCTTCCTGTTCTTGGAGCATTTGGAGAGTAGCCC...CTCACTGACTGCTCTTCCAGAGGTCATGAGTTCAATTCCCAGCAACCACATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | CCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTGACCCTACAAAGCAGTCTTGCCTCTaGCTGGCACTTGCTAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPNSSWLLGSRSISDPTKQSCL*LALANW Trigger: CCAATTAGCAAGTGCCAGGCAGAGGCAAGACTGCTT...TGTAGGGTCAGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR TCA 90 bp | ACCATGTGGTTGCTGGGAATTGAACTCATGACCTCTGGAAGAGCAGTCAGTGAGCTTGAGGAAGTATCCTaGCAGCAGTGCTTTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TMWLLGIELMTSGRAVSELEEVS*QQCFLK Trigger: CTTCAGAAAGCACTGCTGTCAGGATACTTCCTCAAG...CTCACTGACTGCTCTTCCAGAGGTCATGAGTTCAATTCCCAGCAACCACATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | CCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTGACCCTACAGCACAATGGGAGAATTaGCCCAGAAAGCCTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: PTPNSSWLLGSRSISDPTAQWEN*PRKPGI Trigger: AATTCCAGGCTTTCTGGGGCAATTCTCCCATTGTGC...TGTAGGGTCAGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | GTGTCACCTCTGACTCATGGATGTTGTATATGGCACTACAGAACTAAAAATCAACTCCACCAGGCTCCCTaGGCACACGCACAATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSPLTHGCCIWHYRTKNQLHQAP*AHAQWE Trigger: CTCCCATTGTGCGTGTGCCCAGGGAGCCTGGTGGAG...TTGATTTTTAGTTCTGTAGTGCCATATACAACATCCATGAGTCAGAGGTGACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCCCCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTACCAGCATCTCAGGCTaGATCTCAGAGACAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSSPTPNSSWLLGSRSISTSISG*ISETMQ Trigger: TTGCATTGTCTCTGAGATCCAGCCTGAGATGCTGGT...AGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGGGGAAGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | CCCATGTCCATGGACAGAGAAGAAAAGTATGCTTGTTCTGAACTGTGGCGCTCTGTTCCTTCTCTCAGCTaGTTCAAGAGGTCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PMSMDREEKYACSELWRSVPSLS*FKRSLL Trigger: GAGCAGAGACCTCTTGAACCAGCTGAGAGAAGGAAC...AGAGCGCCACAGTTCAGAACAAGCATACTTTTCTTCTCTGTCCATGGACATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | ATGGACAGAGAAGAAAAGTATGCTTGTTCTGAACTGTGGCGCTCTCTTCCCCCATTGCCCCAGAAAGCCTaGAATTTTGGTTCAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MDREEKYACSELWRSLPPLPQKA*NFGSSA Trigger: AGCGCTTGAACCAAAATTCCAGGCTTTCTGGGGCAA...TGGGGGAAGAGAGCGCCACAGTTCAGAACAAGCATACTTTTCTTCTCTGTCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | CCCATGTCCATGGACAGAGAAGAAAAGTATGCTTGTTCTGAACTGTGGCGCTCTGAGTCAATGACGTGTTaGATGGAAGGAAGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PMSMDREEKYACSELWRSESMTC*MEGREK Trigger: CTTCTCCCTTCCTTCCATCCAACACGTCATTGACTC...AGAGCGCCACAGTTCAGAACAAGCATACTTTTCTTCTCTGTCCATGGACATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | TCGGCCTTTCCTTTTGTGTCACCTCTGACTCATGGATGTTGTATATGGCACTACCCATCTCCATACTCCTaGGGAGAGGAAGTTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAFPFVSPLTHGCCIWHYPSPYS*GEEVSV Trigger: GACTGAAACTTCCTCTCCCCAGGAGTATGGAGATGG...GTAGTGCCATATACAACATCCATGAGTCAGAGGTGACACAAAAGGAAAGGCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR TCA 90 bp | CCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTGACCCTACACTACGTGTTTATGGGTaGGAAGCAGATAATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTPNSSWLLGSRSISDPTLRVYG*EADNFL Trigger: CAGGAAATTATCTGCTTCTCACCCATAAACACGTAG...TGTAGGGTCAGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | CCCATGTCCATGGACAGAGAAGAAAAGTATGCTTGTTCTGAACTGTGGCGCTCTGGATCTCAGAGACAATaGAAAGGCAGTTGTCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PMSMDREEKYACSELWRSGSQRQ*KGSCLS Trigger: CGAAAGACAACTGCCTTTGCATTGTCTCTGAGATCC...AGAGCGCCACAGTTCAGAACAAGCATACTTTTCTTCTCTGTCCATGGACATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTATTTAATGTATATGAGCACACTGTAGCTGACACACCAGAAGAGGGTAGCCAGGCTCATGGCTaGCAGAGGGTAGGGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IYLFNVYEHTVADTPEEGSQAHG*QRVGLS Trigger: ACTCAGCCCTACCCTCTGGCAGCCATGAGCCTGGCT...ACCCTCTTCTGGTGTGTCAGCTACAGTGTGCTCATATACATTAAATAAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | ATTTATTTATTTAATGTATATGAGCACACTGTAGCTGACACACCAGAAGAGGGTCCGCATCAGTGCTTCTaGTGCAGGCCGGTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IYLFNVYEHTVADTPEEGPHQCF*CRPVQE Trigger: TTCCTGGACCGGCCTGCACCAGAAGCACTGATGCGG...ACCCTCTTCTGGTGTGTCAGCTACAGTGTGCTCATATACATTAAATAAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | GTGTCACCTCTGACTCATGGATGTTGTATATGGCACTACAGAACTAAAAATCAATCGGTAGCTGCAGTATaGAGACAGCTGGGCTACGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSPLTHGCCIWHYRTKNQSVAAV*RQLGYV Trigger: CACGTAGCCCAGCTGTCTCCATACTGCAGCTACCGA...TTGATTTTTAGTTCTGTAGTGCCATATACAACATCCATGAGTCAGAGGTGACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | GTGTCACCTCTGACTCATGGATGTTGTATATGGCACTACAGAACTAAAAATCAAGAGCCAAAGGCTGGCTaGGACAAAGGAAGCTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: VSPLTHGCCIWHYRTKNQEPKAG*DKGSSI Trigger: GATTGAGCTTCCTTTGTCCCAGCCAGCCTTTGGCTC...TTGATTTTTAGTTCTGTAGTGCCATATACAACATCCATGAGTCAGAGGTGACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | GTGTCACCTCTGACTCATGGATGTTGTATATGGCACTACAGAACTAAAAATCAAGCAGGTTTCTCAGTCTaGTATCTCTCAAGAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSPLTHGCCIWHYRTKNQAGFSV*YLSRAP Trigger: AGGGGCTCTTGAGAGATACCAGACTGAGAAACCTGC...TTGATTTTTAGTTCTGTAGTGCCATATACAACATCCATGAGTCAGAGGTGACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CCA 90 bp | ATTTATTTATTTAATGTATATGAGCACACTGTAGCTGACACACCAGAAGAGGGTCTGGCACTTGCTAATTaGTCTCAACACCTGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: IYLFNVYEHTVADTPEEGLALAN*SQHLGF Trigger: GAATCCCAGGTGTTGAGACCAATTAGCAAGTGCCAG...ACCCTCTTCTGGTGTGTCAGCTACAGTGTGCTCATATACATTAAATAAATAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS TCA 90 bp | TCTCTCAAGAGCCCCTGTAGTAAATCTGAGGCCACTGACCGCTCCTaGGCCTCATCCAGTATCAGCACACTCCAGGCTCCAGGGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLKSPCSKSEATDRS*ASSSISTLQAPGPR Trigger: CCGGGGCCCTGGAGCCTGGAGTGTGCTGATACTGGATGAGGCTCAGGAGCGGTCAGTGGCCTCAGATTTACTACAGGGGCTCTTGAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
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| CDS GCA 90 bp | GCAGGATCCTGGTGGGAACCCCTTTGCCCGAAGCAGTCTTGCCTCTaGCTGGCACTTGCTAATTGGTCTCAACACCTGGGATTCTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AGSWWEPLCPKQSCL*LALANWSQHLGFCP Trigger: CGGGCAGAATCCCAGGTGTTGAGACCAATTAGCAAGTGCCAGGCAGAGGCAAGACTGCTTCGGGCAAAGGGGTTCCCACCAGGATCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS GCA 90 bp | GCGGAGGCAGGATCCTGGTGGGAACCCCTTTGCCCGAAGCAGTCTTaGCTCTGCCTGGCACTTGCTAATTGGTCTCAACACCTGGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: AEAGSWWEPLCPKQS*LCLALANWSQHLGF Trigger: GAATCCCAGGTGTTGAGACCAATTAGCAAGTGCCAGGCAGAGGCAAGACTGCTTCGGGCAAAGGGGTTCCCACCAGGATCCTGCCTCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 90 bp | GGCAGTTGTCTTTCGAGATGGAGAAGCTGTGGTACAGCACCCACGTaGGTGGCTGGGCTGGAGTCCTGCGGTTTCGGTAGCTGCAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: GSCLSRWRSCGTAPT*VAGLESCGFGSCSM Trigger: CATACTGCAGCTACCGAAACCGCAGGACTCCAGCCCAGCCACCCACGTGGGTGCTGTACCACAGCTTCTCCATCTCGAAAGACAACTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS GCA 90 bp | TACAAAGGCTTCATAGACCTGGATCAGAGAGCTGTGATCACCGTCTaGGTGTTCCAGAGCCCGGCGCAAGGCAGCTTCTCCCGCACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YKGFIDLDQRAVITV*VFQSPAQGSFSRTQ Trigger: CTGAGTGCGGGAGAAGCTGCCTTGCGCCGGGCTCTGGAACACGCAGACGGTGATCACAGCTCTCTGATCCAGGTCTATGAAGCCTTTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 90 bp | GGCTACTCTCCAAATGCTCCAAGAACAGGAAGCGAGCAGCCCAGATaGGCAGGGCTCTACGCTGCTCAAGCAGCTCATAGTAGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GYSPNAPRTGSEQPR*AGLYAAQAAHSSRR Trigger: CCTCCTGCTACTATGAGCTGCTTGAGCAGCGTAGAGCCCTGCCCATCTGGGCTGCTCGCTTCCTGTTCTTGGAGCATTTGGAGAGTAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
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| CDS CCA 90 bp | AGGCAAGGGTGGGATCTCCACCAGGCTCCCTGGGCACACGCACAATaGGAGAATTGCCCCAGAAAGCCTGGAATTTTGGTTCAAGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RQGWDLHQAPWAHAQ*ENCPRKPGILVQAL Trigger: CAGCGCTTGAACCAAAATTCCAGGCTTTCTGGGGCAATTCTCCCATTGTGCGTGTGCCCAGGGAGCCTGGTGGAGATCCCACCCTTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
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| CDS CCA 90 bp | GGACAGTGTCCTTGTAGGCAAGGGTGGGATCTCCACCAGGCTCCCTaGGCACACGCACAATGGGAGAATTGCCCCAGAAAGCCTGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: GQCPCRQGWDLHQAP*AHAQWENCPRKPGI Trigger: AATTCCAGGCTTTCTGGGGCAATTCTCCCATTGTGCGTGTGCCCAGGGAGCCTGGTGGAGATCCCACCCTTGCCTACAAGGACACTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
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| CDS CCA 90 bp | GATCCTGGTGGGAACCCCTTTGCCCGAAGCAGTCTTGCCTCTGCCTaGCACTTGCTAATTGGTCTCAACACCTGGGATTCTGCCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: DPGGNPFARSSLASA*HLLIGLNTWDSARI Trigger: GATCCGGGCAGAATCCCAGGTGTTGAGACCAATTAGCAAGTGCCAGGCAGAGGCAAGACTGCTTCGGGCAAAGGGGTTCCCACCAGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 90 bp | GTTGTCTTTCGAGATGGAGAAGCTGTGGTACAGCACCCACGTGGGTaGCTGGGCTGGAGTCCTGCGGTTTCGGTAGCTGCAGTATGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VVFRDGEAVVQHPRG*LGWSPAVSVAAVWR Trigger: TCTCCATACTGCAGCTACCGAAACCGCAGGACTCCAGCCCAGCCACCCACGTGGGTGCTGTACCACAGCTTCTCCATCTCGAAAGACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS TCA 90 bp | GTGTCTCGGGCCACCTTGAGGAAGTATCCTGACAGCAGTGCTTTCTaGAGGTCTCTGCGATTCTGCTCAGAGCCAAAGGCTGGCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VSRATLRKYPDSSAF*RSLRFCSEPKAGWD Trigger: GTCCCAGCCAGCCTTTGGCTCTGAGCAGAATCGCAGAGACCTTCAGAAAGCACTGCTGTCAGGATACTTCCTCAAGGTGGCCCGAGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 90 bp | CGATTTTGCGAACACTCACGTCTGTGTCTTCATACACTGTCTGGATaGCTTGAGCACAGCCAGGGTGAAGGGGTAGCACCCGCGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RFCEHSRLCLHTLSG*LEHSQGEGVAPAVE Trigger: CTCCACCGCGGGTGCTACCCCTTCACCCTGGCTGTGCTCAAGCCATCCAGACAGTGTATGAAGACACAGACGTGAGTGTTCGCAAAATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 90 bp | CAGGCTGGATCTCAGAGACAATGCAAAGGCAGTTGTCTTTCGAGATaGAGAAGCTGTGGTACAGCACCCACGTGGGTGGCTGGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QAGSQRQCKGSCLSR*RSCGTAPTWVAGLE Trigger: CTCCAGCCCAGCCACCCACGTGGGTGCTGTACCACAGCTTCTCCATCTCGAAAGACAACTGCCTTTGCATTGTCTCTGAGATCCAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 90 bp | CCTTTCGTTTACCTCTTCGCTGGGCAGATACACCAGCACATCTCCTaGTGCCTCTTCCTGCTGACACAGCTCAAGCACAGCTTGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PFVYLFAGQIHQHIS*CLFLLTQLKHSLAG Trigger: GCCTGCCAAGCTGTGCTTGAGCTGTGTCAGCAGGAAGAGGCACCAGGAGATGTGCTGGTGTATCTGCCCAGCGAAGAGGTAAACGAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204803.2 |
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| CDS GCA 90 bp | ACAGCCATCTCCATACTCCTGGGGAGAGGAAGTTTCAGTCGCTGCTaGTGGTGGCTCTGCTGTTCCTTCTCTCAGCTGGTTCAAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TAISILLGRGSFSRC*WWLCCSFSQLVQEV Trigger: GACCTCTTGAACCAGCTGAGAGAAGGAACAGCAGAGCCACCAGCAGCAGCGACTGAAACTTCCTCTCCCCAGGAGTATGGAGATGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 90 bp | GGGCACACGCACAATGGGAGAATTGCCCCAGAAAGCCTGGAATTTTaGTTCAAGCGCTGGGTCGGTAACTACAACCACTCTGGGATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GHTHNGRIAPESLEF*FKRWVGNYNHSGIP Trigger: GGGGATCCCAGAGTGGTTGTAGTTACCGACCCAGCGCTTGAACCAAAATTCCAGGCTTTCTGGGGCAATTCTCCCATTGTGCGTGTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
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| CDS CCA 90 bp | CAGAGAAATTTCCTCTTCGCTGGGCAGATACACCAGCACATCTCCTaGTGCCTCTTCCTGCTGACACAGCTCAAGCACAGCTTGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRNFLFAGQIHQHIS*CLFLLTQLKHSLAG Trigger: GCCTGCCAAGCTGTGCTTGAGCTGTGTCAGCAGGAAGAGGCACCAGGAGATGTGCTGGTGTATCTGCCCAGCGAAGAGGAAATTTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 90 bp | CCCCTTTGCCCGAAGCAGTCTTGCCTCTGCCTGGCACTTGCTAATTaGTCTCAACACCTGGGATTCTGCCCGGATCCGAGGATTGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PLCPKQSCLCLALAN*SQHLGFCPDPRIVN Trigger: GTTTACAATCCTCGGATCCGGGCAGAATCCCAGGTGTTGAGACCAATTAGCAAGTGCCAGGCAGAGGCAAGACTGCTTCGGGCAAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 90 bp | TCAGAGACAATGCAAAGGCAGTTGTCTTTCGAGATGGAGAAGCTGTaGTACAGCACCCACGTGGGTGGCTGGGCTGGAGTCCTGCGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SETMQRQLSFEMEKL*YSTHVGGWAGVLRF Trigger: AAACCGCAGGACTCCAGCCCAGCCACCCACGTGGGTGCTGTACCACAGCTTCTCCATCTCGAAAGACAACTGCCTTTGCATTGTCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 90 bp | GCCATCTCCATACTCCTGGGGAGAGGAAGTTTCAGTCGCTGCTGCTaGTGGCTCTGCTGTTCCTTCTCTCAGCTGGTTCAAGAGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AISILLGRGSFSRCC*WLCCSFSQLVQEVS Trigger: AGAGACCTCTTGAACCAGCTGAGAGAAGGAACAGCAGAGCCACCAGCAGCAGCGACTGAAACTTCCTCTCCCCAGGAGTATGGAGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS GCA 90 bp | GAGGGGCGAGCTCCACCAGCATCTCAGGCTGGATCTCAGAGACAATaGAAAGGCAGTTGTCTTTCGAGATGGAGAAGCTGTGGTACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EGRAPPASQAGSQRQ*KGSCLSRWRSCGTA Trigger: TGCTGTACCACAGCTTCTCCATCTCGAAAGACAACTGCCTTTGCATTGTCTCTGAGATCCAGCCTGAGATGCTGGTGGAGCTCGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS GCA 90 bp | AACACAGCCATCTCCATACTCCTGGGGAGAGGAAGTTTCAGTCGCTaGTGCTGGTGGCTCTGCTGTTCCTTCTCTCAGCTGGTTCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NTAISILLGRGSFSR*CWWLCCSFSQLVQE Trigger: CTCTTGAACCAGCTGAGAGAAGGAACAGCAGAGCCACCAGCAGCAGCGACTGAAACTTCCTCTCCCCAGGAGTATGGAGATGGCTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 90 bp | ATCTCCATACTCCTGGGGAGAGGAAGTTTCAGTCGCTGCTGCTGGTaGCTCTGCTGTTCCTTCTCTCAGCTGGTTCAAGAGGTCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISILLGRGSFSRCCW*LCCSFSQLVQEVSA Trigger: AGCAGAGACCTCTTGAACCAGCTGAGAGAAGGAACAGCAGAGCCACCAGCAGCAGCGACTGAAACTTCCTCTCCCCAGGAGTATGGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CAA 90 bp | CCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTGACCCTACATTGCCCGAAGCAGTCTaGCCTCTGCCTGGCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PTPNSSWLLGSRSISDPTLPEAV*PLPGTC Trigger: GCAAGTGCCAGGCAGAGGCAAGACTGCTTCGGGCAA...TGTAGGGTCAGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS TCA 90 bp | ATTTCCTGTCCCATCTGTGTCTCGGGCCACCTTGAGGAAGTATCCTaGCAGCAGTGCTTTCTGAAGGTCTCTGCGATTCTGCTCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISCPICVSGHLEEVS*QQCFLKVSAILLRA Trigger: GGCTCTGAGCAGAATCGCAGAGACCTTCAGAAAGCACTGCTGTCAGGATACTTCCTCAAGGTGGCCCGAGACACAGATGGGACAGGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS TCA 90 bp | CAGAGCCAAAGGCTGGCTGGGACAAAGGAAGCTCAATCCGTTGCATaGGTTCCACAAGCTCTGCTCGGAGTTTACGGGCTTGACATAATG | + |
|
Preference number: 5 (lower is better) Translates to: QSQRLAGTKEAQSVA*VPQALLGVYGLDIM Trigger: CATTATGTCAAGCCCGTAAACTCCGAGCAGAGCTTGTGGAACTCATGCAACGGATTGAGCTTCCTTTGTCCCAGCCAGCCTTTGGCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS TCA 90 bp | TTCGGTAGCTGCAGTATGGAGACAGCTGGGCTACGTGTTTATGGGTaGGAAGCAGATAATTTCCTGTCCCATCTGTGTCTCGGGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: FGSCSMETAGLRVYG*EADNFLSHLCLGPP Trigger: AGGTGGCCCGAGACACAGATGGGACAGGAAATTATCTGCTTCTCACCCATAAACACGTAGCCCAGCTGTCTCCATACTGCAGCTACCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
||
| CDS-3UTR CAA 90 bp | CCCACTCCTAACAGTTCTTGGCTCTTGGGTTCCAGGAGTATATCTGACCCTACAAACCTGAGCATGGTGTaGGGCCCAGTACAGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTPNSSWLLGSRSISDPTNLSMV*GPVQSS Trigger: GGAAGACTGTACTGGGCCCAACACCATGCTCAGGTT...TGTAGGGTCAGATATACTCCTGGAACCCAAGAGCCAAGAACTGTTAGGAGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CAA 90 bp | TCGGCCTTTCCTTTTGTGTCACCTCTGACTCATGGATGTTGTATATGGCACTACTCTCATCAGCCACCCTaGAAGCCAGGCTCATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAFPFVSPLTHGCCIWHYSHQPP*KPGSWL Trigger: CAGCCATGAGCCTGGCTTCAAGGGTGGCTGATGAGA...GTAGTGCCATATACAACATCCATGAGTCAGAGGTGACACAAAAGGAAAGGCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS-3UTR CAA 90 bp | ACCATGTGGTTGCTGGGAATTGAACTCATGACCTCTGGAAGAGCAGTCAGTGAGCGCACAATGGGAGAATaGCCCCAGAAAGCCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TMWLLGIELMTSGRAVSERTMGE*PQKAWN Trigger: ATTCCAGGCTTTCTGGGGCAATTCTCCCATTGTGCG...CTCACTGACTGCTCTTCCAGAGGTCATGAGTTCAATTCCCAGCAACCACATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS GCA 90 bp | GTTCCTAAGATATGTTGCCTCTGGGACGGGAAAGCAGCACAGGAATaGTTCCCATATCTGCTTTTTCCTTTCGTTTACCTCTTCGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPKICCLWDGKAAQE*FPYLLFPFVYLFAG Trigger: CCCAGCGAAGAGGTAAACGAAAGGAAAAAGCAGATATGGGAAGCATTCCTGTGCTGCTTTCCCGTCCCAGAGGCAACATATCTTAGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204803.2 |
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| CDS-3UTR CAA 90 bp | ATTTATTTATTTAATGTATATGAGCACACTGTAGCTGACACACCAGAAGAGGGTCACTGTCTGGATGGCTaGAGCACAGCCAGGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IYLFNVYEHTVADTPEEGHCLDG*STARVK Trigger: CTTCACCCTGGCTGTGCTCAAGCCATCCAGACAGTG...ACCCTCTTCTGGTGTGTCAGCTACAGTGTGCTCATATACATTAAATAAATAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
||
| CDS GCA 72 bp | GGTACAGCACCCACGTGGGTGGCTGGGCTGGAGTCCTaGGGTTTCGGTAGCTGCAGTATGGAGACAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GTAPTWVAGLES*GFGSCSMETAG Trigger: CCCAGCTGTCTCCATACTGCAGCTACCGAAACCGCAGGACTCCAGCCCAGCCACCCACGTGGGTGCTGTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
||
| CDS CCA 72 bp | CGAGATGGAGAAGCTGTGGTACAGCACCCACGTGGGTaGCTGGGCTGGAGTCCTGCGGTTTCGGTAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RDGEAVVQHPRG*LGWSPAVSVAA Trigger: TGCAGCTACCGAAACCGCAGGACTCCAGCCCAGCCACCCACGTGGGTGCTGTACCACAGCTTCTCCATCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 72 bp | CCTTGTAGGCAAGGGTGGGATCTCCACCAGGCTCCCTaGGCACACGCACAATGGGAGAATTGCCCCAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PCRQGWDLHQAP*AHAQWENCPRK Trigger: CTTTCTGGGGCAATTCTCCCATTGTGCGTGTGCCCAGGGAGCCTGGTGGAGATCCCACCCTTGCCTACAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
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| CDS CAA 90 bp | GGTGGGAACCCCTTTGCCCGAAGCAGTCTTGCCTCTGCCTGGCACTaGCTAATTGGTCTCAACACCTGGGATTCTGCCCGGATCCGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGNPFARSSLASAWH*LIGLNTWDSARIRG Trigger: TCCTCGGATCCGGGCAGAATCCCAGGTGTTGAGACCAATTAGCAAGTGCCAGGCAGAGGCAAGACTGCTTCGGGCAAAGGGGTTCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CAA 90 bp | CACATCTCCTGGTGCCTCTTCCTGCTGACACAGCTCAAGCACAGCTaGGCAGGCAGCTTCCACCAGGTCGGTAGGGACAGTGTCCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: HISWCLFLLTQLKHS*AGSFHQVGRDSVLV Trigger: TACAAGGACACTGTCCCTACCGACCTGGTGGAAGCTGCCTGCCAAGCTGTGCTTGAGCTGTGTCAGCAGGAAGAGGCACCAGGAGATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
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| CDS GCA 72 bp | TTCATAGACCTGGATCAGAGAGCTGTGATCACCGTCTaGGTGTTCCAGAGCCCGGCGCAAGGCAGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FIDLDQRAVITV*VFQSPAQGSFS Trigger: GGAGAAGCTGCCTTGCGCCGGGCTCTGGAACACGCAGACGGTGATCACAGCTCTCTGATCCAGGTCTATGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 72 bp | CCGAAGCAGTCTTGCCTCTGCCTGGCACTTGCTAATTaGTCTCAACACCTGGGATTCTGCCCGGATCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PKQSCLCLALAN*SQHLGFCPDPR Trigger: CCTCGGATCCGGGCAGAATCCCAGGTGTTGAGACCAATTAGCAAGTGCCAGGCAGAGGCAAGACTGCTTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS GCA 72 bp | CTGTCCTGTCTGGAATCCTCTGGCCAGCGCAAACTCTaGACACCACTGAGGAATCTGGGTGCTCTTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSCLESSGQRKL*TPLRNLGALAR Trigger: TCTGGCAAGAGCACCCAGATTCCTCAGTGGTGTGCAGAGTTTGCGCTGGCCAGAGGATTCCAGACAGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
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| CDS GCA 72 bp | CACCAGGCTCCCTGGGCACACGCACAATGGGAGAATTaGCCCAGAAAGCCTGGAATTTTGGTTCAAGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HQAPWAHAQWEN*PRKPGILVQAL Trigger: CAGCGCTTGAACCAAAATTCCAGGCTTTCTGGGGCAATTCTCCCATTGTGCGTGTGCCCAGGGAGCCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
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| CDS GCA 72 bp | TGGTGGGAACCCCTTTGCCCGAAGCAGTCTTGCCTCTaGCTGGCACTTGCTAATTGGTCTCAACACCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: WWEPLCPKQSCL*LALANWSQHLG Trigger: TCCCAGGTGTTGAGACCAATTAGCAAGTGCCAGGCAGAGGCAAGACTGCTTCGGGCAAAGGGGTTCCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS GCA 72 bp | GGATCCTGGTGGGAACCCCTTTGCCCGAAGCAGTCTTaGCTCTGCCTGGCACTTGCTAATTGGTCTCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: GSWWEPLCPKQS*LCLALANWSQH Trigger: GTGTTGAGACCAATTAGCAAGTGCCAGGCAGAGGCAAGACTGCTTCGGGCAAAGGGGTTCCCACCAGGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 72 bp | CCAAATGCTCCAAGAACAGGAAGCGAGCAGCCCAGATaGGCAGGGCTCTACGCTGCTCAAGCAGCTCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: PNAPRTGSEQPR*AGLYAAQAAHS Trigger: ACTATGAGCTGCTTGAGCAGCGTAGAGCCCTGCCCATCTGGGCTGCTCGCTTCCTGTTCTTGGAGCATTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
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| CDS CCA 72 bp | TTCCTCTTCGCTGGGCAGATACACCAGCACATCTCCTaGTGCCTCTTCCTGCTGACACAGCTCAAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLFAGQIHQHIS*CLFLLTQLKHS Trigger: GCTGTGCTTGAGCTGTGTCAGCAGGAAGAGGCACCAGGAGATGTGCTGGTGTATCTGCCCAGCGAAGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 72 bp | GCAACACCAGAGAGCTCAGATTCTCTTCACACACTTTaGGGTGGGGCAGTGGGGGAGCCTCTAGTTCTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ATPESSDSLHTL*GGAVGEPLVLG Trigger: CCCTAGAACTAGAGGCTCCCCCACTGCCCCACCCCAAAGTGTGTGAAGAGAATCTGAGCTCTCTGGTGTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 72 bp | CGCATCAGTGCTTCTGGTGCAGGCCGGTCCAGGAAGTaGCATTCCCCTGGCTCTGCAATCTGTTTCCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: RISASGAGRSRK*HSPGSAICFLI Trigger: AATGAGGAAACAGATTGCAGAGCCAGGGGAATGCCACTTCCTGGACCGGCCTGCACCAGAAGCACTGATGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 72 bp | ATGCAAAGGCAGTTGTCTTTCGAGATGGAGAAGCTGTaGTACAGCACCCACGTGGGTGGCTGGGCTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: MQRQLSFEMEKL*YSTHVGGWAGV Trigger: GACTCCAGCCCAGCCACCCACGTGGGTGCTGTACCACAGCTTCTCCATCTCGAAAGACAACTGCCTTTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 72 bp | CTCCTGGGGAGAGGAAGTTTCAGTCGCTGCTGCTGGTaGCTCTGCTGTTCCTTCTCTCAGCTGGTTCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLGRGSFSRCCW*LCCSFSQLVQE Trigger: CTCTTGAACCAGCTGAGAGAAGGAACAGCAGAGCCACCAGCAGCAGCGACTGAAACTTCCTCTCCCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 72 bp | TACCTCTTCGCTGGGCAGATACACCAGCACATCTCCTaGTGCCTCTTCCTGCTGACACAGCTCAAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: YLFAGQIHQHIS*CLFLLTQLKHS Trigger: GCTGTGCTTGAGCTGTGTCAGCAGGAAGAGGCACCAGGAGATGTGCTGGTGTATCTGCCCAGCGAAGAGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204803.2 |
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| CDS GCA 72 bp | GCATGGTGTTGGGCCCAGTACAGTCTTCCTGAGGGATaGTGTATCCAATCTCATGACCCAGGGTCAGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AWCWAQYSLPEG*CIQSHDPGSGP Trigger: TGGACCTGACCCTGGGTCATGAGATTGGATACAGCATCCCTCAGGAAGACTGTACTGGGCCCAACACCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
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| CDS GCA 72 bp | GGGAGAGGAAGTTTCAGTCGCTGCTGCTGGTGGCTCTaGTGTTCCTTCTCTCAGCTGGTTCAAGAGGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GRGSFSRCCWWL*CSFSQLVQEVS Trigger: AGAGACCTCTTGAACCAGCTGAGAGAAGGAACAGCAGAGCCACCAGCAGCAGCGACTGAAACTTCCTCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 72 bp | TGGGATCTCCACCAGGCTCCCTGGGCACACGCACAATaGGAGAATTGCCCCAGAAAGCCTGGAATTTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: WDLHQAPWAHAQ*ENCPRKPGILV Trigger: AACCAAAATTCCAGGCTTTCTGGGGCAATTCTCCCATTGTGCGTGTGCCCAGGGAGCCTGGTGGAGATCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
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| CDS CCA 72 bp | GAACACTCACGTCTGTGTCTTCATACACTGTCTGGATaGCTTGAGCACAGCCAGGGTGAAGGGGTAGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: EHSRLCLHTLSG*LEHSQGEGVAP Trigger: GGGTGCTACCCCTTCACCCTGGCTGTGCTCAAGCCATCCAGACAGTGTATGAAGACACAGACGTGAGTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CAA 90 bp | CTGCTCAGAGCCAAAGGCTGGCTGGGACAAAGGAAGCTCAATCCGTaGCATGAGTTCCACAAGCTCTGCTCGGAGTTTACGGGCTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LLRAKGWLGQRKLNP*HEFHKLCSEFTGLT Trigger: TGTCAAGCCCGTAAACTCCGAGCAGAGCTTGTGGAACTCATGCAACGGATTGAGCTTCCTTTGTCCCAGCCAGCCTTTGGCTCTGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS TCA 72 bp | CCCATCTGTGTCTCGGGCCACCTTGAGGAAGTATCCTaGCAGCAGTGCTTTCTGAAGGTCTCTGCGATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PICVSGHLEEVS*QQCFLKVSAIL Trigger: CAGAATCGCAGAGACCTTCAGAAAGCACTGCTGTCAGGATACTTCCTCAAGGTGGCCCGAGACACAGATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 72 bp | AGGTCTCTGCGATTCTGCTCAGAGCCAAAGGCTGGCTaGGACAAAGGAAGCTCAATCCGTTGCATGAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSLRFCSEPKAG*DKGSSIRCMSS Trigger: GGAACTCATGCAACGGATTGAGCTTCCTTTGTCCCAGCCAGCCTTTGGCTCTGAGCAGAATCGCAGAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 72 bp | CAACCACTCTGGGATCCCCTGGCAGGTTTCTCAGTCTaGTATCTCTCAAGAGCCCCTGTAGTAAATCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QPLWDPLAGFSV*YLSRAPVVNLR Trigger: CCTCAGATTTACTACAGGGGCTCTTGAGAGATACCAGACTGAGAAACCTGCCAGGGGATCCCAGAGTGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
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| CDS CCA 72 bp | TCTCAGAGACAATGCAAAGGCAGTTGTCTTTCGAGATaGAGAAGCTGTGGTACAGCACCCACGTGGGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SQRQCKGSCLSR*RSCGTAPTWVA Trigger: AGCCACCCACGTGGGTGCTGTACCACAGCTTCTCCATCTCGAAAGACAACTGCCTTTGCATTGTCTCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS CCA 72 bp | AAGTATGGAGGGGCGAGCTCCACCAGCATCTCAGGCTaGATCTCAGAGACAATGCAAAGGCAGTTGTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: KYGGASSTSISG*ISETMQRQLSF Trigger: GAAAGACAACTGCCTTTGCATTGTCTCTGAGATCCAGCCTGAGATGCTGGTGGAGCTCGCCCCTCCATACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS GCA 72 bp | GCTCCACCAGCATCTCAGGCTGGATCTCAGAGACAATaGAAAGGCAGTTGTCTTTCGAGATGGAGAAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: APPASQAGSQRQ*KGSCLSRWRSC Trigger: ACAGCTTCTCCATCTCGAAAGACAACTGCCTTTGCATTGTCTCTGAGATCCAGCCTGAGATGCTGGTGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS GCA 72 bp | GGGACGGGAAAGCAGCACAGGAATGCTTCCCATATCTaGTTTTTCCTTTCGTTTACCTCTTCGCTGGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GTGKQHRNASHI*FFLSFTSSLGR Trigger: TCTGCCCAGCGAAGAGGTAAACGAAAGGAAAAAGCAGATATGGGAAGCATTCCTGTGCTGCTTTCCCGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204803.2 |
||
| CDS TCA 72 bp | ATGGAAGGAAGGGAGAAGGAGAAATCGGCCAGCCAATaGGTGACTACGATTTTGCGAACACTCACGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: MEGREKEKSASQ*VTTILRTLTSV Trigger: CACAGACGTGAGTGTTCGCAAAATCGTAGTCACTCATTGGCTGGCCGATTTCTCCTTCTCCCTTCCTTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
||
| CDS TCA 72 bp | GATAATTTCCTGTCCCATCTGTGTCTCGGGCCACCTTaGGGAAGTATCCTGACAGCAGTGCTTTCTGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: DNFLSHLCLGPP*GSILTAVLSEG Trigger: ACCTTCAGAAAGCACTGCTGTCAGGATACTTCCTCAAGGTGGCCCGAGACACAGATGGGACAGGAAATTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
||
| CDS GCA 72 bp | CTGGCACTTGCTAATTGGTCTCAACACCTGGGATTCTaGCCGGATCCGAGGATTGTAAACACTACGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LALANWSQHLGF*PDPRIVNTTKF Trigger: GAACTTCGTAGTGTTTACAATCCTCGGATCCGGGCAGAATCCCAGGTGTTGAGACCAATTAGCAAGTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
||
| CDS CCA 72 bp | CACAATGGGAGAATTGCCCCAGAAAGCCTGGAATTTTaGTTCAAGCGCTGGGTCGGTAACTACAACCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: HNGRIAPESLEF*FKRWVGNYNHS Trigger: AGAGTGGTTGTAGTTACCGACCCAGCGCTTGAACCAAAATTCCAGGCTTTCTGGGGCAATTCTCCCATTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077502.5 ENSMUST00000204803.2 |
||
| CDS CCA 72 bp | CCCATATCTGCTTTTTCCTTTCGTTTACCTCTTCGCTaGGCAGATACACCAGCACATCTCCTGGTGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PISAFSFRLPLR*ADTPAHLLVPL Trigger: AAGAGGCACCAGGAGATGTGCTGGTGTATCTGCCCAGCGAAGAGGTAAACGAAAGGAAAAAGCAGATATGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204803.2 |
||
| CDS CAA 72 bp | ATCTCAGGCTGGATCTCAGAGACAATGCAAAGGCAGTaGTCTTTCGAGATGGAGAAGCTGTGGTACAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: ISGWISETMQRQ*SFEMEKLWYST Trigger: GGTGCTGTACCACAGCTTCTCCATCTCGAAAGACAACTGCCTTTGCATTGTCTCTGAGATCCAGCCTGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS TCA 72 bp | AAGGAAGGGAGAAGGAGAAATCGGCCAGCCAATGAGTaGCTACGATTTTGCGAACACTCACGTCTGTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: KEGRRRNRPANE*LRFCEHSRLCL Trigger: AAGACACAGACGTGAGTGTTCGCAAAATCGTAGTCACTCATTGGCTGGCCGATTTCTCCTTCTCCCTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS TCA 72 bp | TGCAGTATGGAGACAGCTGGGCTACGTGTTTATGGGTaGGAAGCAGATAATTTCCTGTCCCATCTGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: CSMETAGLRVYG*EADNFLSHLCL Trigger: GAGACACAGATGGGACAGGAAATTATCTGCTTCTCACCCATAAACACGTAGCCCAGCTGTCTCCATACTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077502.5 |
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| CDS GCA 72 bp | CAAAGAGTAAACAGAGCCACTGTTCCTAAGATATGTTaGCTCTGGGACGGGAAAGCAGCACAGGAATGCTTC | + |
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Preference number: 6 (lower is better) Translates to: QRVNRATVPKIC*LWDGKAAQECF Trigger: GAAGCATTCCTGTGCTGCTTTCCCGTCCCAGAGGCAACATATCTTAGGAACAGTGGCTCTGTTTACTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204803.2 |
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