RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DPYSL3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024501

Ensembl transcript IDs: ENSMUST00000118043.8, ENSMUST00000121805.9, ENSMUST00000237707.2

Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCCTAGTACACGTCCCACCCCAGCCCCTTTGTGCCCTCCATCTTaGCCTGGGCTCCCACCACCCAATCATCCAAAGGCCCTTCGTGCC +
Preference number: 1 (lower is better)
Translates to: LPSTRPTPAPLCPPS*PGLPPPNHPKALRA
Trigger: GGCACGAAGGGCCTTTGGATGATTGGGTGGTGGGAGCCCAGGGCAAGATGGAGGGCACAAAGGGGCTGGGGTGGGACGTGTACTAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 90 bp GGGACTTGGTGGAAAGCCCCGATGACAGAGCTACTTGAGAGAAGATaGTACCAGCACGCTCTCCCACCCTGGAATGCGGCTGTCTGCCTG +
Preference number: 1 (lower is better)
Translates to: GTWWKAPMTELLERR*YQHALPPWNAAVCL
Trigger: CAGGCAGACAGCCGCATTCCAGGGTGGGAGAGCGTGCTGGTACCATCTTCTCTCAAGTAGCTCTGTCATCGGGGCTTTCCACCAAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR GCA 90 bp CCCCCTTGGGGGTGGTGGTCAAGTCAAACACTGGTCCATCATACATaGCTCTTGGGACTGCATGCAGGTCTGCCATCTTCCTCCTTGCTT +
Preference number: 1 (lower is better)
Translates to: PPWGWWSSQTLVHHT*LLGLHAGLPSSSLL
Trigger: AAGCAAGGAGGAAGATGGCAGACCTGCATGCAGTCCCAAGAGGCATGTATGATGGACCAGTGTTTGACTTGACCACCACCCCCAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR TCA 90 bp GGGAAATGCGCTCAGGTGTGGGATGAGGAGGTTAGCCATTCGCCATaGGCAAAGGAAGCCTTTGGCTCTAGCTCTGCCATGGTCCTAACT +
Preference number: 1 (lower is better)
Translates to: GKCAQVWDEEVSHSP*AKEAFGSSSAMVLT
Trigger: AGTTAGGACCATGGCAGAGCTAGAGCCAAAGGCTTCCTTTGCTCATGGCGAATGGCTAACCTCCTCATCCCACACCTGAGCGCATTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 90 bp CATCTTCCTCCTTGCTTTAATGCGCTTATAGACATAGTCAGAGAATaGGCTGCAGGGAATGAAGCGGCCAGCCCCCTGGGTCACGTGCAG +
Preference number: 1 (lower is better)
Translates to: HLPPCFNALIDIVRE*AAGNEAASPLGHVQ
Trigger: CTGCACGTGACCCAGGGGGCTGGCCGCTTCATTCCCTGCAGCCCATTCTCTGACTATGTCTATAAGCGCATTAAAGCAAGGAGGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR GCA 90 bp TCTACTAGGAAAGGACATGACAAAGTCCAGAACCCAAAGACCTCCTaGCATCTCTGCAGATCCCAGGGGACTGTGATGGAGCACCACTGC +
Preference number: 1 (lower is better)
Translates to: STRKGHDKVQNPKTS*HLCRSQGTVMEHHC
Trigger: GCAGTGGTGCTCCATCACAGTCCCCTGGGATCTGCAGAGATGGCAGGAGGTCTTTGGGTTCTGGACTTTGTCATGTCCTTTCCTAGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR TCA 90 bp AGAACCCAAAGACCTCCTGCCATCTCTGCAGATCCCAGGGGACTGTaGTGGAGCACCACTGCCATATGTGACCATCCTCCATGGAAATTA +
Preference number: 1 (lower is better)
Translates to: RTQRPPAISADPRGL*WSTTAICDHPPWKL
Trigger: TAATTTCCATGGAGGATGGTCACATATGGCAGTGGTGCTCCATCACAGTCCCCTGGGATCTGCAGAGATGGCAGGAGGTCTTTGGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR TCA 90 bp GAACACCCACACACCATGTCTCAAAGGGGAATTACGAGGAATGCATaGCTGCATCAGGACTCAAGCTGGGACGGTCTAAGGGGAGGAGAT +
Preference number: 1 (lower is better)
Translates to: EHPHTMSQRGITRNA*LHQDSSWDGLRGGD
Trigger: ATCTCCTCCCCTTAGACCGTCCCAGCTTGAGTCCTGATGCAGTCATGCATTCCTCGTAATTCCCCTTTGAGACATGGTGTGTGGGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR TCA 90 bp TCACAGGGAGACGCACTGTCTGTCCATAGCCACCAGACACAGAACTaGACACCCACACACCATGTCTCAAAGGGGAATTACGAGGAATGC +
Preference number: 1 (lower is better)
Translates to: SQGDALSVHSHQTQN*TPTHHVSKGNYEEC
Trigger: GCATTCCTCGTAATTCCCCTTTGAGACATGGTGTGTGGGTGTTCAGTTCTGTGTCTGGTGGCTATGGACAGACAGTGCGTCTCCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR GCA 90 bp AGTTTTCTTCACGGTTCAAACCAAACAGCTCTTCCATATCCGAGCTaGCTCACAGCTAGCACAGGTCACAGGGAGACGCACTGTCTGTCC +
Preference number: 1 (lower is better)
Translates to: SFLHGSNQTALPYPS*LTASTGHRETHCLS
Trigger: GGACAGACAGTGCGTCTCCCTGTGACCTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAACCGTGAAGAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 90 bp AGGAGGCGCAGAATTACAGTTCATTTACATGTCTCTTCCCCCATCTaGTGGCCACAGATGGTACTACAACCTATGCTGCTGCCGAGCCTA +
Preference number: 1 (lower is better)
Translates to: RRRRITVHLHVSSPI*WPQMVLQPMLLPSL
Trigger: TAGGCTCGGCAGCAGCATAGGTTGTAGTACCATCTGTGGCCACCAGATGGGGGAAGAGACATGTAAATGAACTGTAATTCTGCGCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR TCA 90 bp TCTCGGCATGAACTTGAGCAATGGCCCCCAGCTCTCCCAGGCAGGTaGAGATCTCATAGAGCTCTGTGTTGGACACTTGATATAAATCCT +
Preference number: 1 (lower is better)
Translates to: SRHELEQWPPALPGR*RSHRALCWTLDINP
Trigger: AGGATTTATATCAAGTGTCCAACACAGAGCTCTATGAGATCTTCACCTGCCTGGGAGAGCTGGGGGCCATTGCTCAAGTTCATGCCGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR GCA 90 bp TATACAGTGCACTCCTGCTACTCAAAGCTGGGTTCCCTACATCTCTaGTGTACTCTCCCTCGGAAGCAGAGATTACTGTTGGGAGCAAAG +
Preference number: 1 (lower is better)
Translates to: YTVHSCYSKLGSLHL*CTLPRKQRLLLGAK
Trigger: CTTTGCTCCCAACAGTAATCTCTGCTTCCGAGGGAGAGTACAGCAGAGATGTAGGGAACCCAGCTTTGAGTAGCAGGAGTGCACTGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR TCA 90 bp CTCTGCAGATCCCAGGGGACTGTGATGGAGCACCACTGCCATATGTaGCCATCCTCCATGGAAATTAACACACATCATAATACAACACAC +
Preference number: 1 (lower is better)
Translates to: LCRSQGTVMEHHCHM*PSSMEINTHHNTTH
Trigger: GTGTGTTGTATTATGATGTGTGTTAATTTCCATGGAGGATGGTCACATATGGCAGTGGTGCTCCATCACAGTCCCCTGGGATCTGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR TCA 90 bp AGCGTACTGGGACATCCAGGAAAGACCCAAGAAAACTCAGAGCTTTaGCGACCGGCTTCAAACCATCTGCTCTGGATTTTGTATTGTCTC +
Preference number: 1 (lower is better)
Translates to: SVLGHPGKTQENSEL*RPASNHLLWILYCL
Trigger: GAGACAATACAAAATCCAGAGCAGATGGTTTGAAGCCGGTCGTCAAAGCTCTGAGTTTTCTTGGGTCTTTCCTGGATGTCCCAGTACGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR GCA 90 bp GATGGAGTTTTCTCTAAGTACTTCGAAGGTGTACGAGGCCTGCTCTaGTCTTCAGAGTACTTAATGCGCAGTGTGATATTTCTCACCGAG +
Preference number: 1 (lower is better)
Translates to: DGVFSKYFEGVRGLL*SSEYLMRSVIFLTE
Trigger: CTCGGTGAGAAATATCACACTGCGCATTAAGTACTCTGAAGAGCAGAGCAGGCCTCGTACACCTTCGAAGTACTTAGAGAAAACTCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 90 bp CCCTACATCTCTGCTGTACTCTCCCTCGGAAGCAGAGATTACTGTTaGGAGCAAAGTTTAGGAACAATAGAGAAAGTCAGCTCTCCCAAA +
Preference number: 1 (lower is better)
Translates to: PYISAVLSLGSRDYC*EQSLGTIEKVSSPK
Trigger: TTTGGGAGAGCTGACTTTCTCTATTGTTCCTAAACTTTGCTCCCAACAGTAATCTCTGCTTCCGAGGGAGAGTACAGCAGAGATGTAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 90 bp GATCTGCTAGCAGACGAGGAAACACTTGGCTTAGCATTGAAAATGTaGTTATACAGTGCACTCCTGCTACTCAAAGCTGGGTTCCCTACA +
Preference number: 1 (lower is better)
Translates to: DLLADEETLGLALKM*LYSALLLLKAGFPT
Trigger: TGTAGGGAACCCAGCTTTGAGTAGCAGGAGTGCACTGTATAACCACATTTTCAATGCTAAGCCAAGTGTTTCCTCGTCTGCTAGCAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 90 bp TTCACAACACTAAACCATCTAACGCACATTGCTCTCAGAGCGTACTaGGACATCCAGGAAAGACCCAAGAAAACTCAGAGCTTTGACGAC +
Preference number: 1 (lower is better)
Translates to: FTTLNHLTHIALRAY*DIQERPKKTQSFDD
Trigger: GTCGTCAAAGCTCTGAGTTTTCTTGGGTCTTTCCTGGATGTCCCAGTACGCTCTGAGAGCAATGTGCGTTAGATGGTTTAGTGTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR GCA 90 bp AGACGAGGAAACACTTGGCTTAGCATTGAAAATGTGGTTATACAGTaGACTCCTGCTACTCAAAGCTGGGTTCCCTACATCTCTGCTGTA +
Preference number: 1 (lower is better)
Translates to: RRGNTWLSIENVVIQ*TPATQSWVPYISAV
Trigger: TACAGCAGAGATGTAGGGAACCCAGCTTTGAGTAGCAGGAGTGCACTGTATAACCACATTTTCAATGCTAAGCCAAGTGTTTCCTCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR GCA 90 bp CTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATaGAGAATCTACCTTAGTGGCCTGTCTGATCGCATGCATGTAAGT +
Preference number: 1 (lower is better)
Translates to: LVVRCSATYALNTII*RIYLSGLSDRMHVS
Trigger: ACTTACATGCATGCGATCAGACAGGCCACTAAGGTAGATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000121805.9
ENSMUST00000237707.2
3UTR TCA 90 bp ATTCAGGCCTTGGGAGATAGACCTCTGCATATCTTGATAAAGAAATaGCCCATAGAACCAGTGGACTTTGAAGTTAGAGAAAGGCCATTT +
Preference number: 1 (lower is better)
Translates to: IQALGDRPLHILIKK*PIEPVDFEVRERPF
Trigger: AAATGGCCTTTCTCTAACTTCAAAGTCCACTGGTTCTATGGGTCATTTCTTTATCAAGATATGCAGAGGTCTATCTCCCAAGGCCTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR TCA 90 bp CTGGAATGCGGCTGTCTGCCTGTGAAGCAGAAGCAATTTGCATTTTaGTTTGTAGCTCAAGTAACATGTTGCTTAGAAAAATTCTCATGT +
Preference number: 1 (lower is better)
Translates to: LECGCLPVKQKQFAF*FVAQVTCCLEKFSC
Trigger: ACATGAGAATTTTTCTAAGCAACATGTTACTTGAGCTACAAATCAAAATGCAAATTGCTTCTGCTTCACAGGCAGACAGCCGCATTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CCA 90 bp GCAGGGAATGAAGCGGCCAGCCCCCTGGGTCACGTGCAGGTTGCCATCTTCCAGCATCCATCTTCCCCGTaGCCACAGCCTTGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: AGNEAASPLGHVQVAIFQHPSSP*PQPCPR
Trigger: TCTGGGACAAGGCTGTGGCCACGGGGAAGATGGATG...CTGGAAGATGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATTCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR CAA 90 bp CCAGCCCCCTGGGTCACGTGCAGGTTGCCATCTTCCAGCATGATCTaGCCCTGGCAGATAACCACCAGAGGTGCACCACGCAGCTCCATC +
Preference number: 2 (lower is better)
Translates to: PAPWVTCRLPSSSMI*PWQITTRGAPRSSI
Trigger: GATGGAGCTGCGTGGTGCACCTCTGGTGGTTATCTGCCAGGGCAAGATCATGCTGGAAGATGGCAACCTGCACGTGACCCAGGGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CCA 90 bp TTAGAACGGCCTCCAGGGGGTGCCACAATGCGTTTGCTAGCTGAGCGGACACCCCATGAACTTGAGCAATaGCCCCCAGCTCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: LERPPGGATMRLLAERTPHELEQ*PPALPG
Trigger: GCCTGGGAGAGCTGGGGGCCATTGCTCAAGTTCATG...GGGTGTCCGCTCAGCTAGCAAACGCATTGTGGCACCCCCTGGAGGCCGTTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CCA 90 bp GTTCCTCACTGGCGGGTTTGGCCGAGTGGGAGAGCCCCGAGTAGAGCCAGCTGGAGCATGATCTTGCCCTaGCAGATAACCACCAGAGGT +
Preference number: 2 (lower is better)
Translates to: VPHWRVWPSGRAPSRASWSMILP*QITTRG
Trigger: ACCTCTGGTGGTTATCTGCCAGGGCAAGATCATGCT...CCAGCTGGCTCTACTCGGGGCTCTCCCACTCGGCCAAACCCGCCAGTGAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CCA 90 bp TTAGAACGGCCTCCAGGGGGTGCCACAATGCGTTTGCTAGCTGAGCGGACACCCCCCCCTTGGGGGTGGTaGTCAAGTCAAACACTGGTC +
Preference number: 2 (lower is better)
Translates to: LERPPGGATMRLLAERTPPPWGW*SSQTLV
Trigger: GACCAGTGTTTGACTTGACCACCACCCCCAAGGGGG...GGGTGTCCGCTCAGCTAGCAAACGCATTGTGGCACCCCCTGGAGGCCGTTCTAA
60% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR CAA 90 bp AGGGATGTGATGTTAGAACGGCCTCCAGGGGGTGCCACAATGCGTTaGCTAGCTGAGCGGACACCCTCATCCACTTGGGTGCCTGACAGG +
Preference number: 2 (lower is better)
Translates to: RDVMLERPPGGATMR*LAERTPSSTWVPDR
Trigger: CCTGTCAGGCACCCAAGTGGATGAGGGTGTCCGCTCAGCTAGCAAACGCATTGTGGCACCCCCTGGAGGCCGTTCTAACATCACATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CCA 90 bp GTTCCTCACTGGCGGGTTTGGCCGAGTGGGAGAGCCCCGAGTAGAGCCAGCTGGACGCTGTCATTCCAGTaGGTGATGTCCACATGCAAA +
Preference number: 2 (lower is better)
Translates to: VPHWRVWPSGRAPSRASWTLSFQ*VMSTCK
Trigger: TTTGCATGTGGACATCACCCACTGGAATGACAGCGT...CCAGCTGGCTCTACTCGGGGCTCTCCCACTCGGCCAAACCCGCCAGTGAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CCA 90 bp CGGCAACCGACTGGTGGTTCTTGGCAGAGACAATCTTCAAGGCATCTGGATCCCGCTCCTCCACGCCATTaGTGCCTTCAGGGATGGCTG +
Preference number: 2 (lower is better)
Translates to: RQPTGGSWQRQSSRHLDPAPPRH*CLQGWL
Trigger: CAGCCATCCCTGAAGGCACCAATGGCGTGGAGGAGC...GGGATCCAGATGCCTTGAAGATTGTCTCTGCCAAGAACCACCAGTCGGTTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR TCA 90 bp CTACTTGAGAGAAGATGGTACCAGCACGCTCTCCCACCCTGGAATGCGGCTGTCACGGGCTTCCAACTCTaGCAGACAAAGAGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: LLERRWYQHALPPWNAAVTGFQL*QTKREA
Trigger: AGCCTCCCTCTTTGTCTGTCAGAGTTGGAAGCCCGT...GACAGCCGCATTCCAGGGTGGGAGAGCGTGCTGGTACCATCTTCTCTCAAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR GCA 90 bp CTACTTGAGAGAAGATGGTACCAGCACGCTCTCCCACCCTGGAATGCGGCTGTCACCACTGCTGCCCACTaGCCTTATGTGTTGCACACC +
Preference number: 2 (lower is better)
Translates to: LLERRWYQHALPPWNAAVTTAAH*PYVLHT
Trigger: GGTGTGCAACACATAAGGGCAGTGGGCAGCAGTGGT...GACAGCCGCATTCCAGGGTGGGAGAGCGTGCTGGTACCATCTTCTCTCAAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CCA 90 bp CGGCAACCGACTGGTGGTTCTTGGCAGAGACAATCTTCAAGGCATCTGGATCCCGGTCTGCTCAGAACGTaGCCTTCTGGGCCGGTTATC +
Preference number: 2 (lower is better)
Translates to: RQPTGGSWQRQSSRHLDPGLLRT*PSGPVI
Trigger: GATAACCGGCCCAGAAGGCCACGTTCTGAGCAGACC...GGGATCCAGATGCCTTGAAGATTGTCTCTGCCAAGAACCACCAGTCGGTTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR TCA 90 bp CTCAGCTTCCAGCTCTTCCGGTCTGCTCAGAACGTGGCCTTCTGGGCCGGTTATGAAAACTCAGAGCTTTaGCGACCGGCTTCAAACCAT +
Preference number: 2 (lower is better)
Translates to: LSFQLFRSAQNVAFWAGYENSEL*RPASNH
Trigger: ATGGTTTGAAGCCGGTCGTCAAAGCTCTGAGTTTTC...ATAACCGGCCCAGAAGGCCACGTTCTGAGCAGACCGGAAGAGCTGGAAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR TCA 90 bp GCAGAGACAATCTTCAAGGCATCTGGATCCCAGATGACAAGGTCGCTGTCAGAGGTACCACGTGGTCAATaGTCATGGTGGTGCCTCCCG +
Preference number: 2 (lower is better)
Translates to: AETIFKASGSQMTRSLSEVPRGQ*SWWCLP
Trigger: CGGGAGGCACCACCATGATCATTGACCACGTGGTAC...CTCTGACAGCGACCTTGTCATCTGGGATCCAGATGCCTTGAAGATTGTCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR GCA 90 bp GTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGGTCACCTCCTGCCATCTCTaGAGATCCCAGGGGACTGTG +
Preference number: 2 (lower is better)
Translates to: VQTKQLFHIRAASQLAQVTSCHL*RSQGTV
Trigger: CACAGTCCCCTGGGATCTGCAGAGATGGCAGGAGGT...GACCTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR GCA 90 bp GTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGGTCTCTCCCACCCTGGAATaGGGCTGTCTGCCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: VQTKQLFHIRAASQLAQVSPTLE*GCLPVK
Trigger: CTTCACAGGCAGACAGCCGCATTCCAGGGTGGGAGA...GACCTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR GCA 90 bp GAACGTGGCCTTCTGGGCCGGTTATCCCCATTTCCAGCATCCGTGCCTGCTCCTTGTTGTAAGATGCAGTaGTACATACGCTCTCAACAC +
Preference number: 2 (lower is better)
Translates to: ERGLLGRLSPFPASVPAPCCKMQ*YIRSQH
Trigger: GTGTTGAGAGCGTATGTAGCACTGCATCTTACAACA...AGGAGCAGGCACGGATGCTGGAAATGGGGATAACCGGCCCAGAAGGCCACGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR GCA 90 bp CTACTTGAGAGAAGATGGTACCAGCACGCTCTCCCACCCTGGAATGCGGCTGTCAATAACATCGGGAAATaGGCTCAGGTGTGGGATGAG +
Preference number: 2 (lower is better)
Translates to: LLERRWYQHALPPWNAAVNNIGK*AQVWDE
Trigger: CTCATCCCACACCTGAGCGCATTTCCCGATGTTATT...GACAGCCGCATTCCAGGGTGGGAGAGCGTGCTGGTACCATCTTCTCTCAAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR TCA 90 bp GCAGAGACAATCTTCAAGGCATCTGGATCCCAGATGACAAGGTCGCTGTCAGAGCTTCAGGGATGGCTGTaGAGTTGTCCTTCCCAATGG +
Preference number: 2 (lower is better)
Translates to: AETIFKASGSQMTRSLSELQGWL*SCPSQW
Trigger: CCATTGGGAAGGACAACTTCACAGCCATCCCTGAAG...CTCTGACAGCGACCTTGTCATCTGGGATCCAGATGCCTTGAAGATTGTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR GCA 90 bp GAACGTGGCCTTCTGGGCCGGTTATCCCCATTTCCAGCATCCGTGCCTGCTCCTTCTTTAGATCTCAACTaGATGGATTCACGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: ERGLLGRLSPFPASVPAPSLDLN*MDSRSF
Trigger: GAAGGAACGTGAATCCATGCAGTTGAGATCTAAAGA...AGGAGCAGGCACGGATGCTGGAAATGGGGATAACCGGCCCAGAAGGCCACGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR GCA 90 bp ACGGTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGAACCCAAAGACCTCCTaGCATCTCTGCAGATCCCAG +
Preference number: 2 (lower is better)
Translates to: TVQTKQLFHIRAASQLAQNPKTS*HLCRSQ
Trigger: CTGGGATCTGCAGAGATGGCAGGAGGTCTTTGGGTT...CTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CCA 90 bp CATGTTAAGAAAACAGTTGGGGAGTTGCCAAGGGATTCTCAGGATTTACGAGGCGGGCTGCATTCTCCATaGCAGCCTTGGAAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: HVKKTVGELPRDSQDLRGGLHSP*QPWKSP
Trigger: GGGGCTCTTCCAAGGCTGCCATGGAGAATGCAGCCC...GCCTCGTAAATCCTGAGAATCCCTTGGCAACTCCCCAACTGTTTTCTTAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR GCA 90 bp CGCAGAATTACAGTTCATTTACATGTCTCTTCCCCCATCTGGTGGCCACAGATGGGAGGCTACCACTGCTaGCCACTGCCCTTATGTGTT +
Preference number: 2 (lower is better)
Translates to: RRITVHLHVSSPIWWPQMGGYHC*PLPLCV
Trigger: AACACATAAGGGCAGTGGGCAGCAGTGGTAGCCTCC...CATCTGTGGCCACCAGATGGGGGAAGAGACATGTAAATGAACTGTAATTCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR GCA 90 bp GCAGAGACAATCTTCAAGGCATCTGGATCCCAGATGACAAGGTCGCTGTCAGAGTCTTGGCAGCATTGGTaGTTGTCACGGCCACAAACT +
Preference number: 2 (lower is better)
Translates to: AETIFKASGSQMTRSLSESWQHW*LSRPQT
Trigger: AGTTTGTGGCCGTGACAAGCACCAATGCTGCCAAGA...CTCTGACAGCGACCTTGTCATCTGGGATCCAGATGCCTTGAAGATTGTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR CAA 90 bp AGCCCCTGGGATCTGCTAGCAGACGAGGAAACACTTGGCTTAGCATaGAAAATGTGGTTATACAGTGCACTCCTGCTACTCAAAGCTGGG +
Preference number: 2 (lower is better)
Translates to: SPWDLLADEETLGLA*KMWLYSALLLLKAG
Trigger: CCCAGCTTTGAGTAGCAGGAGTGCACTGTATAACCACATTTTCAATGCTAAGCCAAGTGTTTCCTCGTCTGCTAGCAGATCCCAGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CAA 90 bp CAGACAAAGAGGGAGGCTACCACTGCTGCCCACTGCCCTTATGTGTaGCACACCAAGAAAACTGCATCATGTCGCTTTATCCATATCACC +
Preference number: 2 (lower is better)
Translates to: QTKREATTAAHCPYV*HTKKTASCRFIHIT
Trigger: GGTGATATGGATAAAGCGACATGATGCAGTTTTCTTGGTGTGCAACACATAAGGGCAGTGGGCAGCAGTGGTAGCCTCCCTCTTTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR TCA 90 bp ACGGTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGCACCACTGCCATATGTaGCCATCCTCCATGGAAATT +
Preference number: 2 (lower is better)
Translates to: TVQTKQLFHIRAASQLAQHHCHM*PSSMEI
Trigger: AATTTCCATGGAGGATGGTCACATATGGCAGTGGTG...CTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR TCA 90 bp TTTTTCTCGACATCCCAGCTTTGTCTGTCCCCTTGTTGTAAGATGCAGTGCTACTCTGTACCTCCTGCTTaGCGCTGTCATTCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: FFSTSQLCLSPCCKMQCYSVPPA*RCHSSG
Trigger: CCCACTGGAATGACAGCGTCAAGCAGGAGGTACAGA...GTAGCACTGCATCTTACAACAAGGGGACAGACAAAGCTGGGATGTCGAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR TCA 90 bp TTTTTCTCGACATCCCAGCTTTGTCTGTCCCCTTGTTGTAAGATGCAGTGCTACCGCCTTTTTCCTTGCTaGGGCTCTGTACCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: FFSTSQLCLSPCCKMQCYRLFPC*GSVPPA
Trigger: AGCAGGAGGTACAGAGCCTCAGCAAGGAAAAAGGCG...GTAGCACTGCATCTTACAACAAGGGGACAGACAAAGCTGGGATGTCGAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR TCA 90 bp GCAGAGACAATCTTCAAGGCATCTGGATCCCAGATGACAAGGTCGCTGTCAGAGTTCGAGGGTACAGGTTaGATATCTTGGCAGCATTGG +
Preference number: 2 (lower is better)
Translates to: AETIFKASGSQMTRSLSEFEGTG*ISWQHW
Trigger: CCAATGCTGCCAAGATATTCAACCTGTACCCTCGAA...CTCTGACAGCGACCTTGTCATCTGGGATCCAGATGCCTTGAAGATTGTCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR TCA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATTCTGGCTGGCGACGGTaGTGGCACGGAACACAGCCT +
Preference number: 2 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNSGWRR*WHGTQP
Trigger: AGGCTGTGTTCCGTGCCATCACCGTCGCCAGCCAGA...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR TCA 90 bp TTTTTCTCGACATCCCAGCTTTGTCTGTCCCCTTGTTGTAAGATGCAGTGCTACTTTCTTCCTGGCTTGTaGGATGAGATCAGCCGCGCT +
Preference number: 2 (lower is better)
Translates to: FFSTSQLCLSPCCKMQCYFLPGL*DEISRA
Trigger: AGCGCGGCTGATCTCATCTCACAAGCCAGGAAGAAA...GTAGCACTGCATCTTACAACAAGGGGACAGACAAAGCTGGGATGTCGAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR GCA 90 bp CTGAGCAAGCAACTGGCATCACAGGTGGAAGAAATGGCTGGATTCTGTCATTCATTTTCTTCTTGCTTCTaGCTCCCTCTTTGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: LSKQLASQVEEMAGFCHSFSSCF*LPLWEG
Trigger: GCCCTCCCAAAGAGGGAGGCAGAAGCAAGAAGAAAA...TGAATGACAGAATCCAGCCATTTCTTCCACCTGTGATGCCAGTTGCTTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CCA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATAGGGGGCAGTTGGTCTaGCTGGCGACGGTGATGGCA +
Preference number: 2 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNRGQLV*LATVMA
Trigger: TGCCATCACCGTCGCCAGCCAGACCAACTGCCCCCT...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR CAA 90 bp GAGCGTACTGGGACATCCAGGAAAGACCCAAGAAAACTCAGAGCTTaGACGACCGGCTTCAAACCATCTGCTCTGGATTTTGTATTGTCT +
Preference number: 2 (lower is better)
Translates to: ERTGTSRKDPRKLRA*TTGFKPSALDFVLS
Trigger: AGACAATACAAAATCCAGAGCAGATGGTTTGAAGCCGGTCGTCAAAGCTCTGAGTTTTCTTGGGTCTTTCCTGGATGTCCCAGTACGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR GCA 90 bp CCCCTTGGGGGTGGTGGTCAAGTCAAACACTGGTCCATCATACATGCCTCTTGGAGATTGTCTCCAATTTaGTTTATTAAGCCATCCTCC +
Preference number: 2 (lower is better)
Translates to: PLGGGGQVKHWSIIHASWRLSPI*FIKPSS
Trigger: GGAGGATGGCTTAATAAAGCAAATTGGAGACAATCT...CCAAGAGGCATGTATGATGGACCAGTGTTTGACTTGACCACCACCCCCAAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CCA 90 bp CATGTTAAGAAAACAGTTGGGGAGTTGCCAAGGGATTCTCAGGATTTACGAGGCAAATGCGCTCAGGTGTaGGATGAGGAGGTTAGCCAT +
Preference number: 2 (lower is better)
Translates to: HVKKTVGELPRDSQDLRGKCAQV*DEEVSH
Trigger: ATGGCTAACCTCCTCATCCCACACCTGAGCGCATTT...GCCTCGTAAATCCTGAGAATCCCTTGGCAACTCCCCAACTGTTTTCTTAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CCA 90 bp TTTTTCTCGACATCCCAGCTTTGTCTGTCCCCTTGTTGTAAGATGCAGTGCTACATCCGTGCCTGCTCCTaGGCAATGATATCTCCATTC +
Preference number: 2 (lower is better)
Translates to: FFSTSQLCLSPCCKMQCYIRACS*AMISPF
Trigger: GAATGGAGATATCATTGCCCAGGAGCAGGCACGGAT...GTAGCACTGCATCTTACAACAAGGGGACAGACAAAGCTGGGATGTCGAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR TCA 90 bp TTTGGAGACTGCAGAGTATTCTTAGAGGGGACTTGGTGGAAAGCCCCGATGACAACTACTCATAGTGAATaGAGAAAGAGACGCATCCTG +
Preference number: 2 (lower is better)
Translates to: FGDCRVFLEGTWWKAPMTTTHSE*RKRRIL
Trigger: CAGGATGCGTCTCTTTCTTCATTCACTATGAGTAGT...TGTCATCGGGGCTTTCCACCAAGTCCCCTCTAAGAATACTCTGCAGTCTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR TCA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATTCCTGGCTTGTGAGATaGGATCAGCCGCGCTCTTGC +
Preference number: 2 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNSWLVR*DQPRSC
Trigger: GCAAGAGCGCGGCTGATCTCATCTCACAAGCCAGGA...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR GCA 90 bp ACGGTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGTCTTTAGATCTCAACTaGATGGATTCACGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: TVQTKQLFHIRAASQLAQSLDLN*MDSRSF
Trigger: GAAGGAACGTGAATCCATGCAGTTGAGATCTAAAGA...CTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR GCA 90 bp GTCATTCAATACATGGTAAGGAAACAAGATCTACTAGGAAAGGACATGACAAAGCACACAATGCCCTTCTaGTCACCCCACCCACCCACC +
Preference number: 2 (lower is better)
Translates to: VIQYMVRKQDLLGKDMTKHTMPF*SPHPPT
Trigger: GGTGGGTGGGTGGGGTGAGCAGAAGGGCATTGTGTG...CTTTGTCATGTCCTTTCCTAGTAGATCTTGTTTCCTTACCATGTATTGAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CCA 90 bp ACGGTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGAGACGAGGAAACACTTaGCTTAGCATTGAAAATGTG +
Preference number: 2 (lower is better)
Translates to: TVQTKQLFHIRAASQLAQRRGNT*LSIENV
Trigger: CACATTTTCAATGCTAAGCCAAGTGTTTCCTCGTCT...CTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CCA 90 bp CATGTTAAGAAAACAGTTGGGGAGTTGCCAAGGGATTCTCAGGATTTACGAGGCCTTGCTCACAGAATCTaGCTCACGGTTGATTTTGGA +
Preference number: 2 (lower is better)
Translates to: HVKKTVGELPRDSQDLRGLAHRI*LTVDFG
Trigger: TCCAAAATCAACCGTGAGCCAGATTCTGTGAGCAAG...GCCTCGTAAATCCTGAGAATCCCTTGGCAACTCCCCAACTGTTTTCTTAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CCA 90 bp GTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATCTACCAGAACGTGGCCTTCTaGGCCGGTTATCCCCATTTC +
Preference number: 2 (lower is better)
Translates to: VVRCSATYALNTIICRIYQNVAF*AGYPHF
Trigger: GAAATGGGGATAACCGGCCCAGAAGGCCACGTTCTG...GTAGATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR GCA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTTTTTCTTCTTGCTTCTaGCTCCCTCTTTGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLFSSCF*LPLWEG
Trigger: GCCCTCCCAAAGAGGGAGGCAGAAGCAAGAAGAAAA...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
ENSMUST00000237707.2
3UTR-3UTR GCA 90 bp TCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTTTTCTTCTTGCTTCTaGCTCCCTCTTTGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: SQLHGFTFLLKYRCTILAFSSCF*LPLWEG
Trigger: GCCCTCCCAAAGAGGGAGGCAGAAGCAAGAAGAAAA...AGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
ENSMUST00000237707.2
3UTR-3UTR GCA 90 bp TTTTTCTCGACATCCCAGCTTTGTCTGTCCCCTTGTTGTAAGATGCAGTGCTACAAACCAAACAACACCTaGAGGCAGAGATGGAGTTTT +
Preference number: 2 (lower is better)
Translates to: FFSTSQLCLSPCCKMQCYKPNNT*RQRWSF
Trigger: AAAACTCCATCTCTGCCTGCAGGTGTTGTTTGGTTT...GTAGCACTGCATCTTACAACAAGGGGACAGACAAAGCTGGGATGTCGAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR GCA 90 bp GTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATCTACCTGGTCCATCATACATaGCTCTTGGGACTGCATGCA +
Preference number: 2 (lower is better)
Translates to: VVRCSATYALNTIICRIYLVHHT*LLGLHA
Trigger: TGCATGCAGTCCCAAGAGGCATGTATGATGGACCAG...GTAGATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CCA 90 bp GTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATCTACGCAGCCTTTGTCCCTTaGAAGAAATCGTCCACTGTG +
Preference number: 2 (lower is better)
Translates to: VVRCSATYALNTIICRIYAAFVP*KKSSTV
Trigger: CACAGTGGACGATTTCTTCCAAGGGACAAAGGCTGC...GTAGATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CCA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATCCGACTGGTGGTTCTTaGCAGAGACAATCTTCAAGG +
Preference number: 2 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNPTGGS*QRQSSR
Trigger: CCTTGAAGATTGTCTCTGCCAAGAACCACCAGTCGG...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CCA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATTTCCCAATGGCTTTCTaGGCAGTGCTAAAGGTACAG +
Preference number: 2 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNFPMAF*AVLKVQ
Trigger: CTGTACCTTTAGCACTGCCCAGAAAGCCATTGGGAA...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR CAA 90 bp CCTGGAATGCGGCTGTCTGCCTGTGAAGCAGAAGCAATTTGCATTTaGATTTGTAGCTCAAGTAACATGTTGCTTAGAAAAATTCTCATG +
Preference number: 2 (lower is better)
Translates to: PGMRLSACEAEAICI*ICSSSNMLLRKILM
Trigger: CATGAGAATTTTTCTAAGCAACATGTTACTTGAGCTACAAATCAAAATGCAAATTGCTTCTGCTTCACAGGCAGACAGCCGCATTCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR GCA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATTGCCATCTTCCTCCTTaGTTTAATGCGCTTATAGAC +
Preference number: 2 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNCHLPP*FNALID
Trigger: GTCTATAAGCGCATTAAAGCAAGGAGGAAGATGGCA...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CCA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATTACAAGCTTCAGATCTaGCAAACTCCCTTTGCGTAT +
Preference number: 2 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNYKLQI*QTPFAY
Trigger: ATACGCAAAGGGAGTTTGCCAGATCTGAAGCTTGTA...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR GCA 90 bp TTGAGGTATTTAGTATACAAGCTTCAGATCTGGCAAACTCCCTTTGCGTATAAATGTTGTAAGATGCAGTaGTACATACGCTCTCAACAC +
Preference number: 2 (lower is better)
Translates to: LRYLVYKLQIWQTPFAYKCCKMQ*YIRSQH
Trigger: GTGTTGAGAGCGTATGTAGCACTGCATCTTACAACA...TTTATACGCAAAGGGAGTTTGCCAGATCTGAAGCTTGTATACTAAATACCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CCA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATGGTGGAAGAAATGGCTaGATTCTGTCATTCAATACA +
Preference number: 2 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNGGRNG*ILSFNT
Trigger: TGTATTGAATGACAGAATCCAGCCATTTCTTCCACC...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CCA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATTGTGACCATCCTCCATaGAAATTAACACACATCATA +
Preference number: 2 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNCDHPP*KLTHII
Trigger: TATGATGTGTGTTAATTTCCATGGAGGATGGTCACA...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR GCA 72 bp ACACGTCCCACCCCAGCCCCTTTGTGCCCTCCATCTTaGCCTGGGCTCCCACCACCCAATCATCCAAAGGCC +
Preference number: 3 (lower is better)
Translates to: TRPTPAPLCPPS*PGLPPPNHPKA
Trigger: GGCCTTTGGATGATTGGGTGGTGGGAGCCCAGGGCAAGATGGAGGGCACAAAGGGGCTGGGGTGGGACGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CAA 90 bp GCAGGGAATGAAGCGGCCAGCCCCCTGGGTCACGTGCAGGTTGCCATCTTCCAGACCGACTGGTGGTTCTaGGCAGAGACAATCTTCAAG +
Preference number: 3 (lower is better)
Translates to: AGNEAASPLGHVQVAIFQTDWWF*AETIFK
Trigger: CTTGAAGATTGTCTCTGCCAAGAACCACCAGTCGGT...CTGGAAGATGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTTCATTCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CAA 90 bp GGCCTTCTGGGCCGGTTATCCCCATTTCCAGCATCCGTGCCTGCTCCTGGGCAATTAACGCCTTTTTCCTaGCTGAGGCTCTGTACCTCC +
Preference number: 3 (lower is better)
Translates to: GLLGRLSPFPASVPAPGQLTPFS*LRLCTS
Trigger: GGAGGTACAGAGCCTCAGCAAGGAAAAAGGCGTTAA...TTGCCCAGGAGCAGGCACGGATGCTGGAAATGGGGATAACCGGCCCAGAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CAA 90 bp TTAGAACGGCCTCCAGGGGGTGCCACAATGCGTTTGCTAGCTGAGCGGACACCCGGGATGGCTGTGAAGTaGTCCTTCCCAATGGCTTTC +
Preference number: 3 (lower is better)
Translates to: LERPPGGATMRLLAERTPGMAVK*SFPMAF
Trigger: GAAAGCCATTGGGAAGGACAACTTCACAGCCATCCC...GGGTGTCCGCTCAGCTAGCAAACGCATTGTGGCACCCCCTGGAGGCCGTTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR CCA 72 bp TGGGACGGTCTAAGGGGAGGAGATCTGGGAGGCTTGTaGCAAGAAGCAACGTTGGCAAGCACTCGCCTCTTG +
Preference number: 3 (lower is better)
Translates to: WDGLRGGDLGGL*QEATLASTRLL
Trigger: CAAGAGGCGAGTGCTTGCCAACGTTGCTTCTTGCCACAAGCCTCCCAGATCTCCTCCCCTTAGACCGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR TCA 72 bp AGACCTCCTGCCATCTCTGCAGATCCCAGGGGACTGTaGTGGAGCACCACTGCCATATGTGACCATCCTCCA +
Preference number: 3 (lower is better)
Translates to: RPPAISADPRGL*WSTTAICDHPP
Trigger: TGGAGGATGGTCACATATGGCAGTGGTGCTCCATCACAGTCCCCTGGGATCTGCAGAGATGGCAGGAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR TCA 72 bp TCATCCACTTGGGTGCCTGACAGGCTAAATCCTGACTaGTGGAGGTTCCTCACTGGCGGGTTTGGCCGAGTG +
Preference number: 3 (lower is better)
Translates to: SSTWVPDRLNPD*WRFLTGGFGRV
Trigger: CACTCGGCCAAACCCGCCAGTGAGGAACCTCCATCAGTCAGGATTTAGCCTGTCAGGCACCCAAGTGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR CCA 72 bp GAGGAGATCTGGGAGGCTTGTGGCAAGAAGCAACGTTaGCAAGCACTCGCCTCTTGGAAGGGACTGAGCAGA +
Preference number: 3 (lower is better)
Translates to: EEIWEACGKKQR*QALASWKGLSR
Trigger: TCTGCTCAGTCCCTTCCAAGAGGCGAGTGCTTGCCAACGTTGCTTCTTGCCACAAGCCTCCCAGATCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR TCA 72 bp GCTCAGGTGTGGGATGAGGAGGTTAGCCATTCGCCATaGGCAAAGGAAGCCTTTGGCTCTAGCTCTGCCATG +
Preference number: 3 (lower is better)
Translates to: AQVWDEEVSHSP*AKEAFGSSSAM
Trigger: CATGGCAGAGCTAGAGCCAAAGGCTTCCTTTGCTCATGGCGAATGGCTAACCTCCTCATCCCACACCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR GCA 72 bp GAGAAGATGGTACCAGCACGCTCTCCCACCCTGGAATaGGGCTGTCTGCCTGTGAAGCAGAAGCAATTTGCA +
Preference number: 3 (lower is better)
Translates to: EKMVPARSPTLE*GCLPVKQKQFA
Trigger: TGCAAATTGCTTCTGCTTCACAGGCAGACAGCCGCATTCCAGGGTGGGAGAGCGTGCTGGTACCATCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR GCA 72 bp CACGGTTCAAACCAAACAGCTCTTCCATATCCGAGCTaGCTCACAGCTAGCACAGGTCACAGGGAGACGCAC +
Preference number: 3 (lower is better)
Translates to: HGSNQTALPYPS*LTASTGHRETH
Trigger: GTGCGTCTCCCTGTGACCTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAACCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CAA 90 bp CCCCTTGGGGGTGGTGGTCAAGTCAAACACTGGTCCATCATACATGCCTCTTGGGGCAGCCTTTGTCCCTaGGAAGAAATCGTCCACTGT +
Preference number: 3 (lower is better)
Translates to: PLGGGGQVKHWSIIHASWGSLCP*EEIVHC
Trigger: ACAGTGGACGATTTCTTCCAAGGGACAAAGGCTGCC...CCAAGAGGCATGTATGATGGACCAGTGTTTGACTTGACCACCACCCCCAAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CAA 90 bp CCCCTTGGGGGTGGTGGTCAAGTCAAACACTGGTCCATCATACATGCCTCTTGGCCGCTAAGGCAGCCTTaGTCCCTTGGAAGAAATCGT +
Preference number: 3 (lower is better)
Translates to: PLGGGGQVKHWSIIHASWPLRQP*SLGRNR
Trigger: ACGATTTCTTCCAAGGGACAAAGGCTGCCTTAGCGG...CCAAGAGGCATGTATGATGGACCAGTGTTTGACTTGACCACCACCCCCAAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR GCA 72 bp GGGTGGTGGTCAAGTCAAACACTGGTCCATCATACATaGCTCTTGGGACTGCATGCAGGTCTGCCATCTTCC +
Preference number: 3 (lower is better)
Translates to: GWWSSQTLVHHT*LLGLHAGLPSS
Trigger: GGAAGATGGCAGACCTGCATGCAGTCCCAAGAGGCATGTATGATGGACCAGTGTTTGACTTGACCACCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR CCA 72 bp CCTTGCTTTAATGCGCTTATAGACATAGTCAGAGAATaGGCTGCAGGGAATGAAGCGGCCAGCCCCCTGGGT +
Preference number: 3 (lower is better)
Translates to: PCFNALIDIVRE*AAGNEAASPLG
Trigger: ACCCAGGGGGCTGGCCGCTTCATTCCCTGCAGCCCATTCTCTGACTATGTCTATAAGCGCATTAAAGCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR TCA 72 bp CAGGATTTACGAGGCTTGGGCACTACTCATAGTGAATaGAGAAAGAGACGCATCCTGAGATGGCGCCTGCCC +
Preference number: 3 (lower is better)
Translates to: QDLRGLGTTHSE*RKRRILRWRLP
Trigger: GGGCAGGCGCCATCTCAGGATGCGTCTCTTTCTTCATTCACTATGAGTAGTGCCCAAGCCTCGTAAATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR TCA 72 bp TCCCCATTTCCAGCATCCGTGCCTGCTCCTGGGCAATaGTATCTCCATTCTCGGCATGAACTTGAGCAATGG +
Preference number: 3 (lower is better)
Translates to: SPFPASVPAPGQ*YLHSRHELEQW
Trigger: CCATTGCTCAAGTTCATGCCGAGAATGGAGATATCATTGCCCAGGAGCAGGCACGGATGCTGGAAATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR GCA 72 bp GGGAGGCTACCACTGCTGCCCACTGCCCTTATGTGTTaGACACCAAGAAAACTGCATCATGTCGCTTTATCC +
Preference number: 3 (lower is better)
Translates to: GRLPLLPTALMC*TPRKLHHVALS
Trigger: GGATAAAGCGACATGATGCAGTTTTCTTGGTGTGCAACACATAAGGGCAGTGGGCAGCAGTGGTAGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 72 bp GGTCAAGTCAAACACTGGTCCATCATACATGCCTCTTaGGACTGCATGCAGGTCTGCCATCTTCCTCCTTGC +
Preference number: 3 (lower is better)
Translates to: GQVKHWSIIHAS*DCMQVCHLPPC
Trigger: GCAAGGAGGAAGATGGCAGACCTGCATGCAGTCCCAAGAGGCATGTATGATGGACCAGTGTTTGACTTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CAA 90 bp CGGCAACCGACTGGTGGTTCTTGGCAGAGACAATCTTCAAGGCATCTGGATCCCCAAGCGAGCATAACATaGGGAAACATAAGGCTTGAG +
Preference number: 3 (lower is better)
Translates to: RQPTGGSWQRQSSRHLDPQASIT*GNIRLE
Trigger: CTCAAGCCTTATGTTTCCCAATGTTATGCTCGCTTG...GGGATCCAGATGCCTTGAAGATTGTCTCTGCCAAGAACCACCAGTCGGTTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CAA 90 bp GTACGAGGCCTGCTCTGCTCTTCAGAGTACTTAATGCGCAGTGTGATATTTCTCTTCTCCATGGCAGCCTaGGAAGAGCCCCAAAGAAGC +
Preference number: 3 (lower is better)
Translates to: VRGLLCSSEYLMRSVIFLFSMAA*EEPQRS
Trigger: GCTTCTTTGGGGCTCTTCCAAGGCTGCCATGGAGAA...GAGAAATATCACACTGCGCATTAAGTACTCTGAAGAGCAGAGCAGGCCTCGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CAA 90 bp GAACGTGGCCTTCTGGGCCGGTTATCCCCATTTCCAGCATCCGTGCCTGCTCCTCATCTGCTCTGGATTTaGTATTGTCTCTTGGATTTT +
Preference number: 3 (lower is better)
Translates to: ERGLLGRLSPFPASVPAPHLLWI*YCLLDF
Trigger: AAAATCCAAGAGACAATACAAAATCCAGAGCAGATG...AGGAGCAGGCACGGATGCTGGAAATGGGGATAACCGGCCCAGAAGGCCACGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR TCA 72 bp ACCCTGGAAGGGCTCAGGCATGGGGAACCACACAGTTaGGGAGGCGCAGAATTACAGTTCATTTACATGTCT +
Preference number: 3 (lower is better)
Translates to: TLEGLRHGEPHS*GGAELQFIYMS
Trigger: AGACATGTAAATGAACTGTAATTCTGCGCCTCCTCAACTGTGTGGTTCCCCATGCCTGAGCCCTTCCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR TCA 72 bp GACGCACTGTCTGTCCATAGCCACCAGACACAGAACTaGACACCCACACACCATGTCTCAAAGGGGAATTAC +
Preference number: 3 (lower is better)
Translates to: DALSVHSHQTQN*TPTHHVSKGNY
Trigger: GTAATTCCCCTTTGAGACATGGTGTGTGGGTGTTCAGTTCTGTGTCTGGTGGCTATGGACAGACAGTGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR GCA 72 bp CACTCCTGCTACTCAAAGCTGGGTTCCCTACATCTCTaGTGTACTCTCCCTCGGAAGCAGAGATTACTGTTG +
Preference number: 3 (lower is better)
Translates to: HSCYSKLGSLHL*CTLPRKQRLLL
Trigger: CAACAGTAATCTCTGCTTCCGAGGGAGAGTACAGCAGAGATGTAGGGAACCCAGCTTTGAGTAGCAGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 72 bp GCGTTTGGAGACTGCAGAGTATTCTTAGAGGGGACTTaGTGGAAAGCCCCGATGACAGAGCTACTTGAGAGA +
Preference number: 3 (lower is better)
Translates to: AFGDCRVFLEGT*WKAPMTELLER
Trigger: TCTCTCAAGTAGCTCTGTCATCGGGGCTTTCCACCAAGTCCCCTCTAAGAATACTCTGCAGTCTCCAAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 72 bp TGTGGCAAGAAGCAACGTTGGCAAGCACTCGCCTCTTaGAAGGGACTGAGCAGAATGATTAGAATGGAGTCC +
Preference number: 3 (lower is better)
Translates to: CGKKQRWQALAS*KGLSRMIRMES
Trigger: GGACTCCATTCTAATCATTCTGCTCAGTCCCTTCCAAGAGGCGAGTGCTTGCCAACGTTGCTTCTTGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 72 bp AATGTGGTTATACAGTGCACTCCTGCTACTCAAAGCTaGGTTCCCTACATCTCTGCTGTACTCTCCCTCGGA +
Preference number: 3 (lower is better)
Translates to: NVVIQCTPATQS*VPYISAVLSLG
Trigger: TCCGAGGGAGAGTACAGCAGAGATGTAGGGAACCCAGCTTTGAGTAGCAGGAGTGCACTGTATAACCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 72 bp CAGCCCCTGGGATCTGCTAGCAGACGAGGAAACACTTaGCTTAGCATTGAAAATGTGGTTATACAGTGCACT +
Preference number: 3 (lower is better)
Translates to: QPLGSASRRGNT*LSIENVVIQCT
Trigger: AGTGCACTGTATAACCACATTTTCAATGCTAAGCCAAGTGTTTCCTCGTCTGCTAGCAGATCCCAGGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 72 bp TTTGGAGACTGCAGAGTATTCTTAGAGGGGACTTGGTaGAAAGCCCCGATGACAGAGCTACTTGAGAGAAGA +
Preference number: 3 (lower is better)
Translates to: FGDCRVFLEGTW*KAPMTELLERR
Trigger: TCTTCTCTCAAGTAGCTCTGTCATCGGGGCTTTCCACCAAGTCCCCTCTAAGAATACTCTGCAGTCTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 72 bp CTAAACCATCTAACGCACATTGCTCTCAGAGCGTACTaGGACATCCAGGAAAGACCCAAGAAAACTCAGAGC +
Preference number: 3 (lower is better)
Translates to: LNHLTHIALRAY*DIQERPKKTQS
Trigger: GCTCTGAGTTTTCTTGGGTCTTTCCTGGATGTCCCAGTACGCTCTGAGAGCAATGTGCGTTAGATGGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR CCA 72 bp CAAAGATGTTGTATTCGGCAACCGACTGGTGGTTCTTaGCAGAGACAATCTTCAAGGCATCTGGATCCCAGA +
Preference number: 3 (lower is better)
Translates to: QRCCIRQPTGGS*QRQSSRHLDPR
Trigger: TCTGGGATCCAGATGCCTTGAAGATTGTCTCTGCCAAGAACCACCAGTCGGTTGCCGAATACAACATCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CAA 90 bp CGGCAACCGACTGGTGGTTCTTGGCAGAGACAATCTTCAAGGCATCTGGATCCCGCTCTGGATTTTGTATaGTCTCTTGGATTTTGTGAT +
Preference number: 3 (lower is better)
Translates to: RQPTGGSWQRQSSRHLDPALDFV*SLGFCD
Trigger: ATCACAAAATCCAAGAGACAATACAAAATCCAGAGC...GGGATCCAGATGCCTTGAAGATTGTCTCTGCCAAGAACCACCAGTCGGTTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR TCA 72 bp AAGATGAAGCACCGTGACAGAGTTTTGCCTAGCATTTaGGAGGCCCTGGACTCAATTGTCCAGCTCTACAAA +
Preference number: 3 (lower is better)
Translates to: KMKHRDRVLPSI*EALDSIVQLYK
Trigger: TTTGTAGAGCTGGACAATTGAGTCCAGGGCCTCTCAAATGCTAGGCAAAACTCTGTCACGGTGCTTCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 72 bp GCAGACGAGGAAACACTTGGCTTAGCATTGAAAATGTaGTTATACAGTGCACTCCTGCTACTCAAAGCTGGG +
Preference number: 3 (lower is better)
Translates to: ADEETLGLALKM*LYSALLLLKAG
Trigger: CCCAGCTTTGAGTAGCAGGAGTGCACTGTATAACCACATTTTCAATGCTAAGCCAAGTGTTTCCTCGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 72 bp AGAAGCTGTTCCTTGCACAGGAAAGGAACACTTGAGTaGAACATAAGGTTTCGGCACAGTGGTACACTTTGG +
Preference number: 3 (lower is better)
Translates to: RSCSLHRKGTLE*NIRFRHSGTLW
Trigger: CCAAAGTGTACCACTGTGCCGAAACCTTATGTTCCACTCAAGTGTTCCTTTCCTGTGCAAGGAACAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CCA 72 bp ATCCCTTCAAAGATGTTGTATTCGGCAACCGACTGGTaGTTCTTGGCAGAGACAATCTTCAAGGCATCTGGA +
Preference number: 3 (lower is better)
Translates to: IPSKMLYSATDW*FLAETIFKASG
Trigger: TCCAGATGCCTTGAAGATTGTCTCTGCCAAGAACCACCAGTCGGTTGCCGAATACAACATCTTTGAAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR-3UTR CAA 90 bp CATGTTAAGAAAACAGTTGGGGAGTTGCCAAGGGATTCTCAGGATTTACGAGGCCAAGCGAGCATAACATaGGGAAACATAAGGCTTGAG +
Preference number: 3 (lower is better)
Translates to: HVKKTVGELPRDSQDLRGQASIT*GNIRLE
Trigger: CTCAAGCCTTATGTTTCCCAATGTTATGCTCGCTTG...GCCTCGTAAATCCTGAGAATCCCTTGGCAACTCCCCAACTGTTTTCTTAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CAA 90 bp TTTTTCTCGACATCCCAGCTTTGTCTGTCCCCTTGTTGTAAGATGCAGTGCTACAAGAGACCTGTCCATTaGTTCATCTGTGTGTGGTCT +
Preference number: 3 (lower is better)
Translates to: FFSTSQLCLSPCCKMQCYKRPVH*FICVWS
Trigger: AGACCACACACAGATGAACAAATGGACAGGTCTCTT...GTAGCACTGCATCTTACAACAAGGGGACAGACAAAGCTGGGATGTCGAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR TCA 72 bp CCATATCACCCTAGAGATTTAGTACCAATTAAAAAGTaGTATCCCAGCCCCTGGGATCTGCTAGCAGACGAG +
Preference number: 3 (lower is better)
Translates to: PYHPRDLVPIKK*YPSPWDLLADE
Trigger: CTCGTCTGCTAGCAGATCCCAGGGGCTGGGATATCACTTTTTAATTGGTACTAAATCTCTAGGGTGATATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR GCA 72 bp CGACATCCCAGCTTTGTCTGTCCCCTTGTTGTAAGATaGAGTGCTACATACGCTCTCAACACTATAATATGC +
Preference number: 3 (lower is better)
Translates to: RHPSFVCPLVVR*SATYALNTIIC
Trigger: GCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGGGGACAGACAAAGCTGGGATGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000121805.9
ENSMUST00000237707.2
3UTR CCA 72 bp AGAATTACAGTTCATTTACATGTCTCTTCCCCCATCTaGTGGCCACAGATGGTACTACAACCTATGCTGCTG +
Preference number: 3 (lower is better)
Translates to: RITVHLHVSSPI*WPQMVLQPMLL
Trigger: CAGCAGCATAGGTTGTAGTACCATCTGTGGCCACCAGATGGGGGAAGAGACATGTAAATGAACTGTAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR-3UTR CAA 90 bp CTCATGTTAAGAAAACAGTTGGGGAGTTGCCAAGGGATTCTCAGGATTTACGAGTCAAGAAGCTGTTCCTaGCACAGGAAAGGAACACTT +
Preference number: 3 (lower is better)
Translates to: LMLRKQLGSCQGILRIYESRSCS*HRKGTL
Trigger: AAGTGTTCCTTTCCTGTGCAAGGAACAGCTTCTTGA...CTCGTAAATCCTGAGAATCCCTTGGCAACTCCCCAACTGTTTTCTTAACATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR GCA 72 bp AGATGCAGTGCTACATACGCTCTCAACACTATAATATaGAGAATCTACCTTAGTGGCCTGTCTGATCGCATG +
Preference number: 3 (lower is better)
Translates to: RCSATYALNTII*RIYLSGLSDRM
Trigger: CATGCGATCAGACAGGCCACTAAGGTAGATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000121805.9
ENSMUST00000237707.2
3UTR GCA 72 bp AACACTTGGCTTAGCATTGAAAATGTGGTTATACAGTaGACTCCTGCTACTCAAAGCTGGGTTCCCTACATC +
Preference number: 3 (lower is better)
Translates to: NTWLSIENVVIQ*TPATQSWVPYI
Trigger: GATGTAGGGAACCCAGCTTTGAGTAGCAGGAGTGCACTGTATAACCACATTTTCAATGCTAAGCCAAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR GCA 72 bp TTCTCTAAGTACTTCGAAGGTGTACGAGGCCTGCTCTaGTCTTCAGAGTACTTAATGCGCAGTGTGATATTT +
Preference number: 3 (lower is better)
Translates to: FSKYFEGVRGLL*SSEYLMRSVIF
Trigger: AAATATCACACTGCGCATTAAGTACTCTGAAGAGCAGAGCAGGCCTCGTACACCTTCGAAGTACTTAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR GCA 72 bp TCCCAGCTTTGTCTGTCCCCTTGTTGTAAGATGCAGTaGTACATACGCTCTCAACACTATAATATGCAGAAT +
Preference number: 3 (lower is better)
Translates to: SQLCLSPCCKMQ*YIRSQHYNMQN
Trigger: ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGGGGACAGACAAAGCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000121805.9
ENSMUST00000237707.2
3UTR-3UTR CAA 90 bp GTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATCTACCCGGGGACAATCAGATaGTCTCCAATTTGCTTTATT +
Preference number: 3 (lower is better)
Translates to: VVRCSATYALNTIICRIYPGTIR*SPICFI
Trigger: AATAAAGCAAATTGGAGACAATCTGATTGTCCCCGG...GTAGATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR TCA 72 bp TTGGGAGATAGACCTCTGCATATCTTGATAAAGAAATaGCCCATAGAACCAGTGGACTTTGAAGTTAGAGAA +
Preference number: 3 (lower is better)
Translates to: LGDRPLHILIKK*PIEPVDFEVRE
Trigger: TTCTCTAACTTCAAAGTCCACTGGTTCTATGGGTCATTTCTTTATCAAGATATGCAGAGGTCTATCTCCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CAA 72 bp TACACGTCCCACCCCAGCCCCTTTGTGCCCTCCATCTaGCCCTGGGCTCCCACCACCCAATCATCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: YTSHPSPFVPSI*PWAPTTQSSKG
Trigger: GCCTTTGGATGATTGGGTGGTGGGAGCCCAGGGCAAGATGGAGGGCACAAAGGGGCTGGGGTGGGACGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp ACGGTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGCCTCACTGGCGGGTTTaGCCGAGTGGGAGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: TVQTKQLFHIRAASQLAQPHWRV*PSGRAP
Trigger: CGGGGCTCTCCCACTCGGCCAAACCCGCCAGTGAGG...CTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp GAAATAACATCGGGAAATGCGCTCAGGTGTGGGATGAGGAGGTTAGCCATTCGCTTCTGCCGTGGGACCTaGTCTGTGGTGCCCGGACGG +
Preference number: 4 (lower is better)
Translates to: EITSGNALRCGMRRLAIRFCRGT*SVVPGR
Trigger: CCGTCCGGGCACCACAGATCAGGTCCCACGGCAGAA...GCGAATGGCTAACCTCCTCATCCCACACCTGAGCGCATTTCCCGATGTTATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CAA 72 bp ATGTTAGAACGGCCTCCAGGGGGTGCCACAATGCGTTaGCTAGCTGAGCGGACACCCTCATCCACTTGGGTG +
Preference number: 4 (lower is better)
Translates to: MLERPPGGATMR*LAERTPSSTWV
Trigger: CACCCAAGTGGATGAGGGTGTCCGCTCAGCTAGCAAACGCATTGTGGCACCCCCTGGAGGCCGTTCTAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
CDS-3UTR TCA 90 bp CTACCACTGCTGCCCACTGCCCTTATGTGTTGCACACCAAGAAAACTGCATCATTCTGGCTGGCGACGGTaGTGGCACGGAACACAGCCT +
Preference number: 4 (lower is better)
Translates to: LPLLPTALMCCTPRKLHHSGWRR*WHGTQP
Trigger: AGGCTGTGTTCCGTGCCATCACCGTCGCCAGCCAGA...ATGATGCAGTTTTCTTGGTGTGCAACACATAAGGGCAGTGGGCAGCAGTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CTACCACTGCTGCCCACTGCCCTTATGTGTTGCACACCAAGAAAACTGCATCATAGGGGGCAGTTGGTCTaGCTGGCGACGGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: LPLLPTALMCCTPRKLHHRGQLV*LATVMA
Trigger: TGCCATCACCGTCGCCAGCCAGACCAACTGCCCCCT...ATGATGCAGTTTTCTTGGTGTGCAACACATAAGGGCAGTGGGCAGCAGTGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp AGTGCACTCCTGCTACTCAAAGCTGGGTTCCCTACATCTCTGCTGTACTCTCCCAATGCGTTTGCTAGCTaGGCGGACACCCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: SALLLLKAGFPTSLLYSPNAFAS*ADTLIH
Trigger: GTGGATGAGGGTGTCCGCTCAGCTAGCAAACGCATT...GGGAGAGTACAGCAGAGATGTAGGGAACCCAGCTTTGAGTAGCAGGAGTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CTGAGCAAGCAACTGGCATCACAGGTGGAAGAAATGGCTGGATTCTGTCATTCAGGCAGGTCGTCCTCGTaGGAGCTGTCCCAACCCCTT +
Preference number: 4 (lower is better)
Translates to: LSKQLASQVEEMAGFCHSGRSSS*ELSQPL
Trigger: AAGGGGTTGGGACAGCTCCCACGAGGACGACCTGCC...TGAATGACAGAATCCAGCCATTTCTTCCACCTGTGATGCCAGTTGCTTGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp ATGATTAGAATGGAGTCCAGAGTTAGGATTCAGGCCTTGGGAGATAGACCTCTGAGACCTCCTTGCCGGTaGCGCTCCGGATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: MIRMESRVRIQALGDRPLRPPCR*RSGSPP
Trigger: GGGTGGAGATCCGGAGCGCCACCGGCAAGGAGGTCT...CAGAGGTCTATCTCCCAAGGCCTGAATCCTAACTCTGGACTCCATTCTAATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp ACGGTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGGCTCTCCCAGGCAGGTaGAGATCTCATAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TVQTKQLFHIRAASQLAQALPGR*RSHRAL
Trigger: CAGAGCTCTATGAGATCTTCACCTGCCTGGGAGAGC...CTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp ACGGTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGCATCTGGATCCCAGATaGCAAGGTCGCTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TVQTKQLFHIRAASQLAQHLDPR*QGRCQS
Trigger: GCTCTGACAGCGACCTTGTCATCTGGGATCCAGATG...CTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp GTACGAGGCCTGCTCTGCTCTTCAGAGTACTTAATGCGCAGTGTGATATTTCTCTCTGCAAGACCTCCTTaGCGGTGGCGCTCCGGATCT +
Preference number: 4 (lower is better)
Translates to: VRGLLCSSEYLMRSVIFLSARPP*RWRSGS
Trigger: AGATCCGGAGCGCCACCGGCAAGGAGGTCTTGCAGA...GAGAAATATCACACTGCGCATTAAGTACTCTGAAGAGCAGAGCAGGCCTCGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp GAGGCGCAGAATTACAGTTCATTTACATGTCTCTTCCCCCATCTGGTGGCCACACATCCATCTTCCCCGTaGCCACAGCCTTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EAQNYSSFTCLFPHLVATHPSSP*PQPCPR
Trigger: TCTGGGACAAGGCTGTGGCCACGGGGAAGATGGATG...TGTGGCCACCAGATGGGGGAAGAGACATGTAAATGAACTGTAATTCTGCGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CAA 72 bp GACCCTGGAAGGGCTCAGGCATGGGGAACCACACAGTaGAGGAGGCGCAGAATTACAGTTCATTTACATGTC +
Preference number: 4 (lower is better)
Translates to: DPGRAQAWGTTQ*RRRRITVHLHV
Trigger: GACATGTAAATGAACTGTAATTCTGCGCCTCCTCAACTGTGTGGTTCCCCATGCCTGAGCCCTTCCAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CAA 72 bp AGAAAGAGACGCATCCTGAGATGGCGCCTGCCCACCTaGAGGACTTCAAGAAGCTGTTCCTTGCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: RKRRILRWRLPT*RTSRSCSLHRK
Trigger: TTTCCTGTGCAAGGAACAGCTTCTTGAAGTCCTCAAGGTGGGCAGGCGCCATCTCAGGATGCGTCTCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp GTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGGTCAGGCTAAATCCTGACTaGTGGAGGTTCCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: VQTKQLFHIRAASQLAQVRLNPD*WRFLTG
Trigger: GCCAGTGAGGAACCTCCATCAGTCAGGATTTAGCCT...GACCTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp GAGGCGCAGAATTACAGTTCATTTACATGTCTCTTCCCCCATCTGGTGGCCACACCTCTTGGGACTGCATaGAGGTCTGCCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EAQNYSSFTCLFPHLVATPLGTA*RSAIFL
Trigger: GAGGAAGATGGCAGACCTGCATGCAGTCCCAAGAGG...TGTGGCCACCAGATGGGGGAAGAGACATGTAAATGAACTGTAATTCTGCGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp GTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGGTCTCGGCAACCGACTGGTaGTTCTTGGCAGAGACAATC +
Preference number: 4 (lower is better)
Translates to: VQTKQLFHIRAASQLAQVSATDW*FLAETI
Trigger: GATTGTCTCTGCCAAGAACCACCAGTCGGTTGCCGA...GACCTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp AGTGCACTCCTGCTACTCAAAGCTGGGTTCCCTACATCTCTGCTGTACTCTCCCACGCTGTCATTCCAGTaGGTGATGTCCACATGCAAA +
Preference number: 4 (lower is better)
Translates to: SALLLLKAGFPTSLLYSPTLSFQ*VMSTCK
Trigger: TTTGCATGTGGACATCACCCACTGGAATGACAGCGT...GGGAGAGTACAGCAGAGATGTAGGGAACCCAGCTTTGAGTAGCAGGAGTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CTCATGTTAAGAAAACAGTTGGGGAGTTGCCAAGGGATTCTCAGGATTTACGAGGCTCCTCCACGCCATTaGTGCCTTCAGGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: LMLRKQLGSCQGILRIYEAPPRH*CLQGWL
Trigger: CAGCCATCCCTGAAGGCACCAATGGCGTGGAGGAGC...CTCGTAAATCCTGAGAATCCCTTGGCAACTCCCCAACTGTTTTCTTAACATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp GAAATAACATCGGGAAATGCGCTCAGGTGTGGGATGAGGAGGTTAGCCATTCGCCCGACTGGTGGTTCTTaGCAGAGACAATCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: EITSGNALRCGMRRLAIRPTGGS*QRQSSR
Trigger: CCTTGAAGATTGTCTCTGCCAAGAACCACCAGTCGG...GCGAATGGCTAACCTCCTCATCCCACACCTGAGCGCATTTCCCGATGTTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CAA 72 bp AGGGAGGCTACCACTGCTGCCCACTGCCCTTATGTGTaGCACACCAAGAAAACTGCATCATGTCGCTTTATC +
Preference number: 4 (lower is better)
Translates to: REATTAAHCPYV*HTKKTASCRFI
Trigger: GATAAAGCGACATGATGCAGTTTTCTTGGTGTGCAACACATAAGGGCAGTGGGCAGCAGTGGTAGCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CAA 72 bp TGGTCAAGTCAAACACTGGTCCATCATACATGCCTCTaGGGACTGCATGCAGGTCTGCCATCTTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WSSQTLVHHTCL*GLHAGLPSSSL
Trigger: CAAGGAGGAAGATGGCAGACCTGCATGCAGTCCCAAGAGGCATGTATGATGGACCAGTGTTTGACTTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
CDS-3UTR GCA 90 bp GATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGGCCCCCTGGGTCACGTaGAGGTTGCCATCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: DLNCMDSRSFLNIGVPFWAPWVT*RLPSSS
Trigger: GCTGGAAGATGGCAACCTGCACGTGACCCAGGGGGC...CCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp CATGTTAAGAAAACAGTTGGGGAGTTGCCAAGGGATTCTCAGGATTTACGAGGCAGGCACCCTCCACGTTaGAGAACATGCCACCGTACT +
Preference number: 4 (lower is better)
Translates to: HVKKTVGELPRDSQDLRGRHPPR*RTCHRT
Trigger: AGTACGGTGGCATGTTCTGCAACGTGGAGGGTGCCT...GCCTCGTAAATCCTGAGAATCCCTTGGCAACTCCCCAACTGTTTTCTTAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTAGGGGGCAGTTGGTCTaGCTGGCGACGGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLRGQLV*LATVMA
Trigger: TGCCATCACCGTCGCCAGCCAGACCAACTGCCCCCT...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp TTTGGAGACTGCAGAGTATTCTTAGAGGGGACTTGGTGGAAAGCCCCGATGACATATTCGGCAACCGACTaGTGGTTCTTGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: FGDCRVFLEGTWWKAPMTYSATD*WFLAET
Trigger: TGTCTCTGCCAAGAACCACCAGTCGGTTGCCGAATA...TGTCATCGGGGCTTTCCACCAAGTCCCCTCTAAGAATACTCTGCAGTCTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CTACCACTGCTGCCCACTGCCCTTATGTGTTGCACACCAAGAAAACTGCATCATGACATAGTCAGAGAATaGGCTGCAGGGAATGAAGCG +
Preference number: 4 (lower is better)
Translates to: LPLLPTALMCCTPRKLHHDIVRE*AAGNEA
Trigger: CGCTTCATTCCCTGCAGCCCATTCTCTGACTATGTC...ATGATGCAGTTTTCTTGGTGTGCAACACATAAGGGCAGTGGGCAGCAGTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp ACGCCACTTTTCATAGGCCTCTGTCAGGCTAGACTCAGGTTCAGGTACCACGTGGGGAAGAACATTCCATaGACCACCCAGATAAAGGAT +
Preference number: 4 (lower is better)
Translates to: TPLFIGLCQARLRFRYHVGKNIP*TTQIKD
Trigger: ATCCTTTATCTGGGTGGTCCATGGAATGTTCTTCCC...CACGTGGTACCTGAACCTGAGTCTAGCCTGACAGAGGCCTATGAAAAGTGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
CDS-3UTR TCA 90 bp AAATTAACACACATCATAATACAACACACAATGCCCTTCTGCTCACCCCACCCAGTACCACGTGGTCAATaGTCATGGTGGTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: KLTHIIIQHTMPFCSPHPVPRGQ*SWWCLP
Trigger: CGGGAGGCACCACCATGATCATTGACCACGTGGTAC...TGGGTGGGGTGAGCAGAAGGGCATTGTGTGTTGTATTATGATGTGTGTTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATGCACTTCCAGAGAGCTaGAGATCCCCGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNALPES*RSPLAS
Trigger: GCTGGCCAGCGGGGATCTGCAGCTCTCTGGAAGTGC...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp AGATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCCCCCTGGGTCACGTaGAGGTTGCCATCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RSQLHGFTFLLKYRCTILAPWVT*RLPSSS
Trigger: GCTGGAAGATGGCAACCTGCACGTGACCCAGGGGGC...CAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTGCTCCTCCACGCCATTaGTGCCTTCAGGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLAPPRH*CLQGWL
Trigger: CAGCCATCCCTGAAGGCACCAATGGCGTGGAGGAGC...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp TATTTAGTATACAAGCTTCAGATCTGGCAAACTCCCTTTGCGTATAAAAGTCCTAAGCGGCCAGCCCCCTaGGTCACGTGCAGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: YLVYKLQIWQTPFAYKSPKRPAP*VTCRLP
Trigger: TGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTT...AGGACTTTTATACGCAAAGGGAGTTTGCCAGATCTGAAGCTTGTATACTAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTCCTCACTGGCGGGTTTaGCCGAGTGGGAGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: HGFTFLLKYRCTILASIFPHWRV*PSGRAP
Trigger: CGGGGCTCTCCCACTCGGCCAAACCCGCCAGTGAGG...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
3UTR CAA 72 bp ATGTCAATAGGTTGCCATTGGGGGCTCAGCAATAACTaGGCGTTTGGAGACTGCAGAGTATTCTTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: MSIGCHWGLSNN*AFGDCRVFLEG
Trigger: CCCCTCTAAGAATACTCTGCAGTCTCCAAACGCCAAGTTATTGCTGAGCCCCCAATGGCAACCTATTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CAA 72 bp GGGACATCCAGGAAAGACCCAAGAAAACTCAGAGCTTaGACGACCGGCTTCAAACCATCTGCTCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: GTSRKDPRKLRA*TTGFKPSALDF
Trigger: AAAATCCAGAGCAGATGGTTTGAAGCCGGTCGTCAAAGCTCTGAGTTTTCTTGGGTCTTTCCTGGATGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
3UTR CAA 72 bp TCAAAGATGTTGTATTCGGCAACCGACTGGTGGTTCTaGGCAGAGACAATCTTCAAGGCATCTGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: SKMLYSATDWWF*AETIFKASGSQ
Trigger: CTGGGATCCAGATGCCTTGAAGATTGTCTCTGCCAAGAACCACCAGTCGGTTGCCGAATACAACATCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
CDS-3UTR TCA 90 bp AGCACCATGAGAGCTTTAAAGAAGCAAGATTCCTCTTCTGAGGTGAAAGCCTTTTCTGTACCTCCTGCTTaGCGCTGTCATTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: STMRALKKQDSSSEVKAFSVPPA*RCHSSG
Trigger: CCCACTGGAATGACAGCGTCAAGCAGGAGGTACAGA...AAAGGCTTTCACCTCAGAAGAGGAATCTTGCTTCTTTAAAGCTCTCATGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp TGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTCTGGCTGGCGACGGTaGTGGCACGGAACACAGCCT +
Preference number: 4 (lower is better)
Translates to: CMDSRSFLNIGVPFWLQFSGWRR*WHGTQP
Trigger: AGGCTGTGTTCCGTGCCATCACCGTCGCCAGCCAGA...AAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp TCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCCTGGCTTGTGAGATaGGATCAGCCGCGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SQLHGFTFLLKYRCTILASWLVR*DQPRSC
Trigger: GCAAGAGCGCGGCTGATCTCATCTCACAAGCCAGGA...AGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp TGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTGCACTTCCAGAGAGCTaGAGATCCCCGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CMDSRSFLNIGVPFWLQFALPES*RSPLAS
Trigger: GCTGGCCAGCGGGGATCTGCAGCTCTCTGGAAGTGC...AAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp GATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCATGAACTTGAGCAATaGCCCCCAGCTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: DLNCMDSRSFLNIGVPFWHELEQ*PPALPG
Trigger: GCCTGGGAGAGCTGGGGGCCATTGCTCAAGTTCATG...CCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp TCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTGTCAGGGCTCAGAGGTaGGGATGTCACAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: SQLHGFTFLLKYRCTILAVRAQR*GCHKRS
Trigger: GCTGCGTTTGTGACATCCCCACCTCTGAGCCCTGAC...AGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp TCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTCATCCATCTTCCCCGTaGCCACAGCCTTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SQLHGFTFLLKYRCTILAHPSSP*PQPCPR
Trigger: TCTGGGACAAGGCTGTGGCCACGGGGAAGATGGATG...AGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTAAGCGGCCAGCCCCCTaGGTCACGTGCAGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: HGFTFLLKYRCTILASIFKRPAP*VTCRLP
Trigger: TGGCAACCTGCACGTGACCCAGGGGGCTGGCCGCTT...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp GATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGTCTGTACCTCCTGCTTaGCGCTGTCATTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: DLNCMDSRSFLNIGVPFWSVPPA*RCHSSG
Trigger: CCCACTGGAATGACAGCGTCAAGCAGGAGGTACAGA...CCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp GATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCGCCTTTTTCCTTGCTaGGGCTCTGTACCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DLNCMDSRSFLNIGVPFWRLFPC*GSVPPA
Trigger: AGCAGGAGGTACAGAGCCTCAGCAAGGAAAAAGGCG...CCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp GATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGGCTCTCCCAGGCAGGTaGAGATCTCATAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: DLNCMDSRSFLNIGVPFWALPGR*RSHRAL
Trigger: CAGAGCTCTATGAGATCTTCACCTGCCTGGGAGAGC...CCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp AGATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGTCCTGGCTTGTGAGATaGGATCAGCCGCGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RSQLHGFTFLLKYRCTILSWLVR*DQPRSC
Trigger: GCAAGAGCGCGGCTGATCTCATCTCACAAGCCAGGA...CAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp CATGTTAAGAAAACAGTTGGGGAGTTGCCAAGGGATTCTCAGGATTTACGAGGCTTCGAGGGTACAGGTTaGATATCTTGGCAGCATTGG +
Preference number: 4 (lower is better)
Translates to: HVKKTVGELPRDSQDLRGFEGTG*ISWQHW
Trigger: CCAATGCTGCCAAGATATTCAACCTGTACCCTCGAA...GCCTCGTAAATCCTGAGAATCCCTTGGCAACTCCCCAACTGTTTTCTTAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCATCTGGATCCCAGATaGCAAGGTCGCTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLHLDPR*QGRCQS
Trigger: GCTCTGACAGCGACCTTGTCATCTGGGATCCAGATG...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp AGCACCATGAGAGCTTTAAAGAAGCAAGATTCCTCTTCTGAGGTGAAAGCCTTTATCTGGAAGTGGGTATaGACGTCAATGCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: STMRALKKQDSSSEVKAFIWKWV*TSMPPG
Trigger: CCCTGGAGGCATTGACGTCCATACCCACTTCCAGAT...AAAGGCTTTCACCTCAGAAGAGGAATCTTGCTTCTTTAAAGCTCTCATGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATCATGAACTTGAGCAATaGCCCCCAGCTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNHELEQ*PPALPG
Trigger: GCCTGGGAGAGCTGGGGGCCATTGCTCAAGTTCATG...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp TCCAGAGTTAGGATTCAGGCCTTGGGAGATAGACCTCTGCATATCTTGATAAAGATCCGTGCCTGCTCCTaGGCAATGATATCTCCATTC +
Preference number: 4 (lower is better)
Translates to: SRVRIQALGDRPLHILIKIRACS*AMISPF
Trigger: GAATGGAGATATCATTGCCCAGGAGCAGGCACGGAT...CTTTATCAAGATATGCAGAGGTCTATCTCCCAAGGCCTGAATCCTAACTCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATGTCAGGGCTCAGAGGTaGGGATGTCACAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNVRAQR*GCHKRS
Trigger: GCTGCGTTTGTGACATCCCCACCTCTGAGCCCTGAC...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CATGTTAAGAAAACAGTTGGGGAGTTGCCAAGGGATTCTCAGGATTTACGAGGCATATCTTGGCAGCATTaGTGCTTGTCACGGCCACAA +
Preference number: 4 (lower is better)
Translates to: HVKKTVGELPRDSQDLRGISWQH*CLSRPQ
Trigger: TTGTGGCCGTGACAAGCACCAATGCTGCCAAGATAT...GCCTCGTAAATCCTGAGAATCCCTTGGCAACTCCCCAACTGTTTTCTTAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp AGATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGCCCCCTTGGGGGTGGTaGTCAAGTCAAACACTGGTC +
Preference number: 4 (lower is better)
Translates to: RSQLHGFTFLLKYRCTILPPWGW*SSQTLV
Trigger: GACCAGTGTTTGACTTGACCACCACCCCCAAGGGGG...CAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp TCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTCTTCAGGGATGGCTGTaGAGTTGTCCTTCCCAATGG +
Preference number: 4 (lower is better)
Translates to: SQLHGFTFLLKYRCTILALQGWL*SCPSQW
Trigger: CCATTGGGAAGGACAACTTCACAGCCATCCCTGAAG...AGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp TCCATGGAAATTAACACACATCATAATACAACACACAATGCCCTTCTGCTCACCCTTCAGGGATGGCTGTaGAGTTGTCCTTCCCAATGG +
Preference number: 4 (lower is better)
Translates to: SMEINTHHNTTHNALLLTLQGWL*SCPSQW
Trigger: CCATTGGGAAGGACAACTTCACAGCCATCCCTGAAG...GGTGAGCAGAAGGGCATTGTGTGTTGTATTATGATGTGTGTTAATTTCCATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp GATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGAGGCTAAATCCTGACTaGTGGAGGTTCCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: DLNCMDSRSFLNIGVPFWRLNPD*WRFLTG
Trigger: GCCAGTGAGGAACCTCCATCAGTCAGGATTTAGCCT...CCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp GATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGATCTGGAAGTGGGTATaGACGTCAATGCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DLNCMDSRSFLNIGVPFWIWKWV*TSMPPG
Trigger: CCCTGGAGGCATTGACGTCCATACCCACTTCCAGAT...CCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp GAAATAACATCGGGAAATGCGCTCAGGTGTGGGATGAGGAGGTTAGCCATTCGCCATAGAGCTCTGTGTTaGACACTTGATATAAATCCT +
Preference number: 4 (lower is better)
Translates to: EITSGNALRCGMRRLAIRHRALC*TLDINP
Trigger: AGGATTTATATCAAGTGTCCAACACAGAGCTCTATG...GCGAATGGCTAACCTCCTCATCCCACACCTGAGCGCATTTCCCGATGTTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp TGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTGGTCTGCTCAGAACGTaGCCTTCTGGGCCGGTTATC +
Preference number: 4 (lower is better)
Translates to: CMDSRSFLNIGVPFWLQFGLLRT*PSGPVI
Trigger: GATAACCGGCCCAGAAGGCCACGTTCTGAGCAGACC...AAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp GTCATTCAATACATGGTAAGGAAACAAGATCTACTAGGAAAGGACATGACAAAGCCCCCTTGGGGGTGGTaGTCAAGTCAAACACTGGTC +
Preference number: 4 (lower is better)
Translates to: VIQYMVRKQDLLGKDMTKPPWGW*SSQTLV
Trigger: GACCAGTGTTTGACTTGACCACCACCCCCAAGGGGG...CTTTGTCATGTCCTTTCCTAGTAGATCTTGTTTCCTTACCATGTATTGAATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp AAATTAACACACATCATAATACAACACACAATGCCCTTCTGCTCACCCCACCCAGGTCACTCTTGTCCTTaGGACCAAGGTTCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: KLTHIIIQHTMPFCSPHPGHSCP*DQGSAR
Trigger: TCTTGCAGAACCTTGGTCCCAAGGACAAGAGTGACC...TGGGTGGGGTGAGCAGAAGGGCATTGTGTGTTGTATTATGATGTGTGTTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CAA 72 bp GATCTGCTAGCAGACGAGGAAACACTTGGCTTAGCATaGAAAATGTGGTTATACAGTGCACTCCTGCTACTC +
Preference number: 4 (lower is better)
Translates to: DLLADEETLGLA*KMWLYSALLLL
Trigger: GAGTAGCAGGAGTGCACTGTATAACCACATTTTCAATGCTAAGCCAAGTGTTTCCTCGTCTGCTAGCAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTGTACCACGTGGTCAATaGTCATGGTGGTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: HGFTFLLKYRCTILASIFVPRGQ*SWWCLP
Trigger: CGGGAGGCACCACCATGATCATTGACCACGTGGTAC...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp GTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATCTACAGGCTCTGTACCTCCTaGTTGACGCTGTCATTCCAG +
Preference number: 4 (lower is better)
Translates to: VVRCSATYALNTIICRIYRLCTS*LTLSFQ
Trigger: CTGGAATGACAGCGTCAAGCAGGAGGTACAGAGCCT...GTAGATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp TGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTCCTCTTGGGACTGCATaGAGGTCTGCCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CMDSRSFLNIGVPFWLQFPLGTA*RSAIFL
Trigger: GAGGAAGATGGCAGACCTGCATGCAGTCCCAAGAGG...AAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp AGATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGCATGCCTCTTGGGACTaGATGCAGGTCTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: RSQLHGFTFLLKYRCTILHASWD*MQVCHL
Trigger: AAGATGGCAGACCTGCATGCAGTCCCAAGAGGCATG...CAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp GTCATTCAATACATGGTAAGGAAACAAGATCTACTAGGAAAGGACATGACAAAGCCACGTTGCAGAACATaGCACCGTACTTCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: VIQYMVRKQDLLGKDMTKPRCRT*HRTSAV
Trigger: CACGGCAGAAGTACGGTGGCATGTTCTGCAACGTGG...CTTTGTCATGTCCTTTCCTAGTAGATCTTGTTTCCTTACCATGTATTGAATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp TTGAGGTATTTAGTATACAAGCTTCAGATCTGGCAAACTCCCTTTGCGTATAAATTGGGACCAAGGTTCTaGAAGACCTCCTTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: LRYLVYKLQIWQTPFAYKLGPRF*KTSLPV
Trigger: CACCGGCAAGGAGGTCTTGCAGAACCTTGGTCCCAA...TTTATACGCAAAGGGAGTTTGCCAGATCTGAAGCTTGTATACTAAATACCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp GATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGGCAGCCTTTGTCCCTTaGAAGAAATCGTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: DLNCMDSRSFLNIGVPFWAAFVP*KKSSTV
Trigger: CACAGTGGACGATTTCTTCCAAGGGACAAAGGCTGC...CCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTATCCGTGCCTGCTCCTaGGCAATGATATCTCCATTC +
Preference number: 4 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLIRACS*AMISPF
Trigger: GAATGGAGATATCATTGCCCAGGAGCAGGCACGGAT...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp TGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTCAGAACGTGGCCTTCTaGGCCGGTTATCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: CMDSRSFLNIGVPFWLQFQNVAF*AGYPHF
Trigger: GAAATGGGGATAACCGGCCCAGAAGGCCACGTTCTG...AAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp TTGAGGTATTTAGTATACAAGCTTCAGATCTGGCAAACTCCCTTTGCGTATAAACAGAACGTGGCCTTCTaGGCCGGTTATCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: LRYLVYKLQIWQTPFAYKQNVAF*AGYPHF
Trigger: GAAATGGGGATAACCGGCCCAGAAGGCCACGTTCTG...TTTATACGCAAAGGGAGTTTGCCAGATCTGAAGCTTGTATACTAAATACCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTGGTCTGCTCAGAACGTaGCCTTCTGGGCCGGTTATC +
Preference number: 4 (lower is better)
Translates to: HGFTFLLKYRCTILASIFGLLRT*PSGPVI
Trigger: GATAACCGGCCCAGAAGGCCACGTTCTGAGCAGACC...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCCGACTGGTGGTTCTTaGCAGAGACAATCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLPTGGS*QRQSSR
Trigger: CCTTGAAGATTGTCTCTGCCAAGAACCACCAGTCGG...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTTATTCGGCAACCGACTaGTGGTTCTTGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLYSATD*WFLAET
Trigger: TGTCTCTGCCAAGAACCACCAGTCGGTTGCCGAATA...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp GATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGAGCATGATCTTGCCCTaGCAGATAACCACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: DLNCMDSRSFLNIGVPFWSMILP*QITTRG
Trigger: ACCTCTGGTGGTTATCTGCCAGGGCAAGATCATGCT...CCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTAGCATGATCTTGCCCTaGCAGATAACCACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLSMILP*QITTRG
Trigger: ACCTCTGGTGGTTATCTGCCAGGGCAAGATCATGCT...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp TGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTTCTTCCTGGCTTGTaGGATGAGATCAGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: CMDSRSFLNIGVPFWLQFFLPGL*DEISRA
Trigger: AGCGCGGCTGATCTCATCTCACAAGCCAGGAAGAAA...AAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp TCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTTCGAGGGTACAGGTTaGATATCTTGGCAGCATTGG +
Preference number: 4 (lower is better)
Translates to: SQLHGFTFLLKYRCTILAFEGTG*ISWQHW
Trigger: CCAATGCTGCCAAGATATTCAACCTGTACCCTCGAA...AGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR TCA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTAATGCGTTTGCTAGCTaGGCGGACACCCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: HGFTFLLKYRCTILASIFNAFAS*ADTLIH
Trigger: GTGGATGAGGGTGTCCGCTCAGCTAGCAAACGCATT...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp CTGAGCAAGCAACTGGCATCACAGGTGGAAGAAATGGCTGGATTCTGTCATTCAAGATTGTCTCCAATTTaGTTTATTAAGCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: LSKQLASQVEEMAGFCHSRLSPI*FIKPSS
Trigger: GGAGGATGGCTTAATAAAGCAAATTGGAGACAATCT...TGAATGACAGAATCCAGCCATTTCTTCCACCTGTGATGCCAGTTGCTTGCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp TGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTAGGCTCTGTACCTCCTaGTTGACGCTGTCATTCCAG +
Preference number: 4 (lower is better)
Translates to: CMDSRSFLNIGVPFWLQFRLCTS*LTLSFQ
Trigger: CTGGAATGACAGCGTCAAGCAGGAGGTACAGAGCCT...AAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp AGATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGTCTTGGCAGCATTGGTaGTTGTCACGGCCACAAACT +
Preference number: 4 (lower is better)
Translates to: RSQLHGFTFLLKYRCTILSWQHW*LSRPQT
Trigger: AGTTTGTGGCCGTGACAAGCACCAATGCTGCCAAGA...CAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATTCTTGGCAGCATTGGTaGTTGTCACGGCCACAAACT +
Preference number: 4 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNSWQHW*LSRPQT
Trigger: AGTTTGTGGCCGTGACAAGCACCAATGCTGCCAAGA...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp AGATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGCTGGTCCATCATACATaGCTCTTGGGACTGCATGCA +
Preference number: 4 (lower is better)
Translates to: RSQLHGFTFLLKYRCTILLVHHT*LLGLHA
Trigger: TGCATGCAGTCCCAAGAGGCATGTATGATGGACCAG...CAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp AGATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCAGCCTTTGTCCCTTaGAAGAAATCGTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: RSQLHGFTFLLKYRCTILAAFVP*KKSSTV
Trigger: CACAGTGGACGATTTCTTCCAAGGGACAAAGGCTGC...CAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp TCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTACGCTGTCATTCCAGTaGGTGATGTCCACATGCAAA +
Preference number: 4 (lower is better)
Translates to: SQLHGFTFLLKYRCTILATLSFQ*VMSTCK
Trigger: TTTGCATGTGGACATCACCCACTGGAATGACAGCGT...AGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp TGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTGTGCTAAAGGTACAGTaGGCACTTCCAGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CMDSRSFLNIGVPFWLQFVLKVQ*ALPESC
Trigger: GCAGCTCTCTGGAAGTGCCCACTGTACCTTTAGCAC...AAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp GATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGTTCCCAATGGCTTTCTaGGCAGTGCTAAAGGTACAG +
Preference number: 4 (lower is better)
Translates to: DLNCMDSRSFLNIGVPFWFPMAF*AVLKVQ
Trigger: CTGTACCTTTAGCACTGCCCAGAAAGCCATTGGGAA...CCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTTTCCCAATGGCTTTCTaGGCAGTGCTAAAGGTACAG +
Preference number: 4 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLFPMAF*AVLKVQ
Trigger: CTGTACCTTTAGCACTGCCCAGAAAGCCATTGGGAA...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp TCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTATATCTTGGCAGCATTaGTGCTTGTCACGGCCACAA +
Preference number: 4 (lower is better)
Translates to: SQLHGFTFLLKYRCTILAISWQH*CLSRPQ
Trigger: TTGTGGCCGTGACAAGCACCAATGCTGCCAAGATAT...AGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp TGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTCGGCAACCGACTGGTaGTTCTTGGCAGAGACAATC +
Preference number: 4 (lower is better)
Translates to: CMDSRSFLNIGVPFWLQFSATDW*FLAETI
Trigger: GATTGTCTCTGCCAAGAACCACCAGTCGGTTGCCGA...AAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp AGATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGACATAGTCAGAGAATaGGCTGCAGGGAATGAAGCG +
Preference number: 4 (lower is better)
Translates to: RSQLHGFTFLLKYRCTILDIVRE*AAGNEA
Trigger: CGCTTCATTCCCTGCAGCCCATTCTCTGACTATGTC...CAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp AGATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGATCATACATGCCTCTTaGGACTGCATGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RSQLHGFTFLLKYRCTILIIHAS*DCMQVC
Trigger: GCAGACCTGCATGCAGTCCCAAGAGGCATGTATGAT...CAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTCATGCCTCTTGGGACTaGATGCAGGTCTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: HGFTFLLKYRCTILASIFHASWD*MQVCHL
Trigger: AAGATGGCAGACCTGCATGCAGTCCCAAGAGGCATG...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp TATTTAGTATACAAGCTTCAGATCTGGCAAACTCCCTTTGCGTATAAAAGTCCTCTGGTCCATCATACATaGCTCTTGGGACTGCATGCA +
Preference number: 4 (lower is better)
Translates to: YLVYKLQIWQTPFAYKSPLVHHT*LLGLHA
Trigger: TGCATGCAGTCCCAAGAGGCATGTATGATGGACCAG...AGGACTTTTATACGCAAAGGGAGTTTGCCAGATCTGAAGCTTGTATACTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTAGAAATCGTCCACTGTaGTCATTCCCTTGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLRNRPL*SFPCKA
Trigger: TGCCTTACAAGGGAATGACCACAGTGGACGATTTCT...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTGTGCTAAAGGTACAGTaGGCACTTCCAGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HGFTFLLKYRCTILASIFVLKVQ*ALPESC
Trigger: GCAGCTCTCTGGAAGTGCCCACTGTACCTTTAGCAC...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTGGTCAAGTCAAACACTaGTCCATCATACATGCCTCT +
Preference number: 4 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLGQVKH*SIIHAS
Trigger: AGAGGCATGTATGATGGACCAGTGTTTGACTTGACC...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp TGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTGTCACAAACGCAGCTaGTTTGGCCCAGTTCTTACT +
Preference number: 4 (lower is better)
Translates to: CMDSRSFLNIGVPFWLQFCHKRS*FGPVLT
Trigger: AGTAAGAACTGGGCCAAAGCAGCTGCGTTTGTGACA...AAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp TCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTGCCATCTTCCTCCTTaGTTTAATGCGCTTATAGAC +
Preference number: 4 (lower is better)
Translates to: SQLHGFTFLLKYRCTILACHLPP*FNALID
Trigger: GTCTATAAGCGCATTAAAGCAAGGAGGAAGATGGCA...AGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTATCATACATGCCTCTTaGGACTGCATGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: HGFTFLLKYRCTILASIFIIHAS*DCMQVC
Trigger: GCAGACCTGCATGCAGTCCCAAGAGGCATGTATGAT...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp TTGAGGTATTTAGTATACAAGCTTCAGATCTGGCAAACTCCCTTTGCGTATAAAGGTCAAGTCAAACACTaGTCCATCATACATGCCTCT +
Preference number: 4 (lower is better)
Translates to: LRYLVYKLQIWQTPFAYKGQVKH*SIIHAS
Trigger: AGAGGCATGTATGATGGACCAGTGTTTGACTTGACC...TTTATACGCAAAGGGAGTTTGCCAGATCTGAAGCTTGTATACTAAATACCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CAA 72 bp CGGCTGTCTGCCTGTGAAGCAGAAGCAATTTGCATTTaGATTTGTAGCTCAAGTAACATGTTGCTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: RLSACEAEAICI*ICSSSNMLLRK
Trigger: TTTTCTAAGCAACATGTTACTTGAGCTACAAATCAAAATGCAAATTGCTTCTGCTTCACAGGCAGACAGCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
3UTR CAA 72 bp ATGATTAGAATGGAGTCCAGAGTTAGGATTCAGGCCTaGGGAGATAGACCTCTGCATATCTTGATAAAGAAA +
Preference number: 4 (lower is better)
Translates to: MIRMESRVRIQA*GDRPLHILIKK
Trigger: TTTCTTTATCAAGATATGCAGAGGTCTATCTCCCAAGGCCTGAATCCTAACTCTGGACTCCATTCTAATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp GTCATTCAATACATGGTAAGGAAACAAGATCTACTAGGAAAGGACATGACAAAGTGCCATCTTCCTCCTTaGTTTAATGCGCTTATAGAC +
Preference number: 4 (lower is better)
Translates to: VIQYMVRKQDLLGKDMTKCHLPP*FNALID
Trigger: GTCTATAAGCGCATTAAAGCAAGGAGGAAGATGGCA...CTTTGTCATGTCCTTTCCTAGTAGATCTTGTTTCCTTACCATGTATTGAATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CCA 90 bp AGATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGCATAGAGCTCTGTGTTaGACACTTGATATAAATCCT +
Preference number: 4 (lower is better)
Translates to: RSQLHGFTFLLKYRCTILHRALC*TLDINP
Trigger: AGGATTTATATCAAGTGTCCAACACAGAGCTCTATG...CAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR GCA 90 bp TGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTAGATTGTCTCCAATTTaGTTTATTAAGCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: CMDSRSFLNIGVPFWLQFRLSPI*FIKPSS
Trigger: GGAGGATGGCTTAATAAAGCAAATTGGAGACAATCT...AAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS GCA 90 bp GCCCGGGCCCCTGCGCGCGTCCACTTCCATCCCGGGCCGGTTCCCTaGGCCACGGCCGCTGCCCTGGCTGCTCCGGGGAGTCTTGGCGCC +
Preference number: 5 (lower is better)
Translates to: ARAPARVHFHPGPVP*ATAAALAAPGSLGA
Trigger: GGCGCCAAGACTCCCCGGAGCAGCCAGGGCAGCGGCCGTGGCGCAGGGAACCGGCCCGGGATGGAAGTGGACGCGCGCAGGGGCCCGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS GCA 90 bp GACGGTCACTCTTGTCCTTGGGACCAAGGTTCTGCAAGACCTCCTTaGCGGTGGCGCTCCGGATCTCCACCCCAGCGGGCTTGGGGGACT +
Preference number: 5 (lower is better)
Translates to: DGHSCPWDQGSARPP*RWRSGSPPQRAWGT
Trigger: AGTCCCCCAAGCCCGCTGGGGTGGAGATCCGGAGCGCCACCGGCAAGGAGGTCTTGCAGAACCTTGGTCCCAAGGACAAGAGTGACCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS GCA 90 bp CCCTTGATTAGAAGACGGTCACTCTTGTCCTTGGGACCAAGGTTCTaGAAGACCTCCTTGCCGGTGGCGCTCCGGATCTCCACCCCAGCG +
Preference number: 5 (lower is better)
Translates to: PLIRRRSLLSLGPRF*KTSLPVALRISTPA
Trigger: CGCTGGGGTGGAGATCCGGAGCGCCACCGGCAAGGAGGTCTTGCAGAACCTTGGTCCCAAGGACAAGAGTGACCGTCTTCTAATCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS GCA 90 bp TGGCGCCGCGCTGTCCCACACTCAGGGCATCAAAATCCAACGTCTTaGTCTCGAAGGCACCCTCCACGTTGCAGAACATGCCACCGTACT +
Preference number: 5 (lower is better)
Translates to: WRRAVPHSGHQNPTS*SRRHPPRCRTCHRT
Trigger: AGTACGGTGGCATGTTCTGCAACGTGGAGGGTGCCTTCGAGAGCAAGACGTTGGATTTTGATGCCCTGAGTGTGGGACAGCGCGGCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp AGTGCACTCCTGCTACTCAAAGCTGGGTTCCCTACATCTCTGCTGTACTCTCCCAAGGCACCCTCCACGTaGCAGAACATGCCACCGTAC +
Preference number: 5 (lower is better)
Translates to: SALLLLKAGFPTSLLYSPKAPST*QNMPPY
Trigger: GTACGGTGGCATGTTCTGCAACGTGGAGGGTGCCTT...GGGAGAGTACAGCAGAGATGTAGGGAACCCAGCTTTGAGTAGCAGGAGTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp CTCCATGGCAGCCTTGGAAGAGCCCCAAAGAAGCTAAAGAAGAAGAGACCTGTCATTCTCGGCATGAACTaGAGCAATGGCCCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LHGSLGRAPKKLKKKRPVILGMN*SNGPQL
Trigger: GAGCTGGGGGCCATTGCTCAAGTTCATGCCGAGAAT...GACAGGTCTCTTCTTCTTTAGCTTCTTTGGGGCTCTTCCAAGGCTGCCATGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp ACGGTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGTGGGTCACGTGCAGGTaGCCATCTTCCAGCATGATC +
Preference number: 5 (lower is better)
Translates to: TVQTKQLFHIRAASQLAQWVTCR*PSSSMI
Trigger: GATCATGCTGGAAGATGGCAACCTGCACGTGACCCA...CTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp ACGGTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGCGGTCACTCTTGTCCTaGGGACCAAGGTTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: TVQTKQLFHIRAASQLAQRSLLS*GPRFCK
Trigger: CTTGCAGAACCTTGGTCCCAAGGACAAGAGTGACCG...CTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp GTTCAAACCAAACAGCTCTTCCATATCCGAGCTGCCTCACAGCTAGCACAGGTCGGCAGCCTTTGTCCCTaGGAAGAAATCGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: VQTKQLFHIRAASQLAQVGSLCP*EEIVHC
Trigger: ACAGTGGACGATTTCTTCCAAGGGACAAAGGCTGCC...GACCTGTGCTAGCTGTGAGGCAGCTCGGATATGGAAGAGCTGTTTGGTTTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp CTACTTGAGAGAAGATGGTACCAGCACGCTCTCCCACCCTGGAATGCGGCTGTCCCGGGGACAATCAGATaGTCTCCAATTTGCTTTATT +
Preference number: 5 (lower is better)
Translates to: LLERRWYQHALPPWNAAVPGTIR*SPICFI
Trigger: AATAAAGCAAATTGGAGACAATCTGATTGTCCCCGG...GACAGCCGCATTCCAGGGTGGGAGAGCGTGCTGGTACCATCTTCTCTCAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp GAGGCGCAGAATTACAGTTCATTTACATGTCTCTTCCCCCATCTGGTGGCCACATCAAAATCCAACGTCTaGCTCTCGAAGGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: EAQNYSSFTCLFPHLVATSKSNV*LSKAPS
Trigger: GGAGGGTGCCTTCGAGAGCAAGACGTTGGATTTTGA...TGTGGCCACCAGATGGGGGAAGAGACATGTAAATGAACTGTAATTCTGCGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS CCA 90 bp AGGGAAGAGAGGGAAGAACATTCCATGGACCACCCAGATAAAGGATaGCTAAGGAAGGAATCGGTCTCGCTTGCCTGCCGGATTTTGTTT +
Preference number: 5 (lower is better)
Translates to: REEREEHSMDHPDKG*LRKESVSLACRILF
Trigger: AAACAAAATCCGGCAGGCAAGCGAGACCGATTCCTTCCTTAGCCATCCTTTATCTGGGTGGTCCATGGAATGTTCTTCCCTCTCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
CDS-3UTR CAA 90 bp TTTTTCTCGACATCCCAGCTTTGTCTGTCCCCTTGTTGTAAGATGCAGTGCTACTCTTCCAGCATGATCTaGCCCTGGCAGATAACCACC +
Preference number: 5 (lower is better)
Translates to: FFSTSQLCLSPCCKMQCYSSSMI*PWQITT
Trigger: GGTGGTTATCTGCCAGGGCAAGATCATGCTGGAAGA...GTAGCACTGCATCTTACAACAAGGGGACAGACAAAGCTGGGATGTCGAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp AGATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGTTCTGCAAGACCTCCTaGCCGGTGGCGCTCCGGATC +
Preference number: 5 (lower is better)
Translates to: RSQLHGFTFLLKYRCTILFCKTS*PVALRI
Trigger: GATCCGGAGCGCCACCGGCAAGGAGGTCTTGCAGAA...CAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp CTCATGTTAAGAAAACAGTTGGGGAGTTGCCAAGGGATTCTCAGGATTTACGAGGGGATGGCTGTGAAGTaGTCCTTCCCAATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: LMLRKQLGSCQGILRIYEGMAVK*SFPMAF
Trigger: GAAAGCCATTGGGAAGGACAACTTCACAGCCATCCC...CTCGTAAATCCTGAGAATCCCTTGGCAACTCCCCAACTGTTTTCTTAACATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp TGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTCGCTCCTCCACGCCATaGGTGCCTTCAGGGATGGCT +
Preference number: 5 (lower is better)
Translates to: CMDSRSFLNIGVPFWLQFRSSTP*VPSGMA
Trigger: AGCCATCCCTGAAGGCACCAATGGCGTGGAGGAGCG...AAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTATTCTCGGCATGAACTaGAGCAATGGCCCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLILGMN*SNGPQL
Trigger: GAGCTGGGGGCCATTGCTCAAGTTCATGCCGAGAAT...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTCGCTCCTCCACGCCATaGGTGCCTTCAGGGATGGCT +
Preference number: 5 (lower is better)
Translates to: HGFTFLLKYRCTILASIFRSSTP*VPSGMA
Trigger: AGCCATCCCTGAAGGCACCAATGGCGTGGAGGAGCG...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp GATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGTGGGTCACGTGCAGGTaGCCATCTTCCAGCATGATC +
Preference number: 5 (lower is better)
Translates to: DLNCMDSRSFLNIGVPFWWVTCR*PSSSMI
Trigger: GATCATGCTGGAAGATGGCAACCTGCACGTGACCCA...CCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp ACGCCACTTTTCATAGGCCTCTGTCAGGCTAGACTCAGGTTCAGGTACCACGTGCTGAAAGACACATCTTaGAGAATGACCAGAAAAGAT +
Preference number: 5 (lower is better)
Translates to: TPLFIGLCQARLRFRYHVLKDTS*RMTRKD
Trigger: ATCTTTTCTGGTCATTCTCAAAGATGTGTCTTTCAG...CACGTGGTACCTGAACCTGAGTCTAGCCTGACAGAGGCCTATGAAAAGTGGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2
CDS-3UTR CAA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTTTAACGCCTTTTTCCTaGCTGAGGCTCTGTACCTCC +
Preference number: 5 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLLTPFS*LRLCTS
Trigger: GGAGGTACAGAGCCTCAGCAAGGAAAAAGGCGTTAA...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp TCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTACCGACTGGTGGTTCTaGGCAGAGACAATCTTCAAG +
Preference number: 5 (lower is better)
Translates to: SQLHGFTFLLKYRCTILATDWWF*AETIFK
Trigger: CTTGAAGATTGTCTCTGCCAAGAACCACCAGTCGGT...AGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp TCCATGGAAATTAACACACATCATAATACAACACACAATGCCCTTCTGCTCACCACCGACTGGTGGTTCTaGGCAGAGACAATCTTCAAG +
Preference number: 5 (lower is better)
Translates to: SMEINTHHNTTHNALLLTTDWWF*AETIFK
Trigger: CTTGAAGATTGTCTCTGCCAAGAACCACCAGTCGGT...GGTGAGCAGAAGGGCATTGTGTGTTGTATTATGATGTGTGTTAATTTCCATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp AGATCTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGTCTTCCAGCATGATCTaGCCCTGGCAGATAACCACC +
Preference number: 5 (lower is better)
Translates to: RSQLHGFTFLLKYRCTILSSSMI*PWQITT
Trigger: GGTGGTTATCTGCCAGGGCAAGATCATGCTGGAAGA...CAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp GTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATCTACCATCATACATGCCTCTaGGGACTGCATGCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: VVRCSATYALNTIICRIYHHTCL*GLHAGL
Trigger: CAGACCTGCATGCAGTCCCAAGAGGCATGTATGATG...GTAGATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp TGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTCCGCTAAGGCAGCCTTaGTCCCTTGGAAGAAATCGT +
Preference number: 5 (lower is better)
Translates to: CMDSRSFLNIGVPFWLQFPLRQP*SLGRNR
Trigger: ACGATTTCTTCCAAGGGACAAAGGCTGCCTTAGCGG...AAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp CCTTGTTGTAAGATGCAGTGCTACATACGCTCTCAACACTATAATATGCAGAATTTAACGCCTTTTTCCTaGCTGAGGCTCTGTACCTCC +
Preference number: 5 (lower is better)
Translates to: PCCKMQCYIRSQHYNMQNLTPFS*LRLCTS
Trigger: GGAGGTACAGAGCCTCAGCAAGGAAAAAGGCGTTAA...ATTCTGCATATTATAGTGTTGAGAGCGTATGTAGCACTGCATCTTACAACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTGGCAGCCTTTGTCCCTaGGAAGAAATCGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: HGFTFLLKYRCTILASIFGSLCP*EEIVHC
Trigger: ACAGTGGACGATTTCTTCCAAGGGACAAAGGCTGCC...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTGGGATGGCTGTGAAGTaGTCCTTCCCAATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: HGFTFLLKYRCTILASIFGMAVK*SFPMAF
Trigger: GAAAGCCATTGGGAAGGACAACTTCACAGCCATCCC...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTCATCATACATGCCTCTaGGGACTGCATGCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: HGFTFLLKYRCTILASIFHHTCL*GLHAGL
Trigger: CAGACCTGCATGCAGTCCCAAGAGGCATGTATGATG...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp CTCAACTGCATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCCGGGGACAATCAGATaGTCTCCAATTTGCTTTATT +
Preference number: 5 (lower is better)
Translates to: LNCMDSRSFLNIGVPFWLPGTIR*SPICFI
Trigger: AATAAAGCAAATTGGAGACAATCTGATTGTCCCCGG...AAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATGCAGTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTAATATCTTGGCAGCATaGGTGCTTGTCACGGCCACA +
Preference number: 5 (lower is better)
Translates to: HGFTFLLKYRCTILASIFNILAA*VLVTAT
Trigger: TGTGGCCGTGACAAGCACCAATGCTGCCAAGATATT...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS-3UTR CAA 90 bp CATGGATTCACGTTCCTTCTTAAATATCGGTGTACCATTTTGGCTTCAATTTTTTTTCGAGGGTACAGGTaGAATATCTTGGCAGCATTG +
Preference number: 5 (lower is better)
Translates to: HGFTFLLKYRCTILASIFFRGYR*NILAAL
Trigger: CAATGCTGCCAAGATATTCAACCTGTACCCTCGAAA...AAAAATTGAAGCCAAAATGGTACACCGATATTTAAGAAGGAACGTGAATCCATG
39% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000118043.8
ENSMUST00000121805.9
CDS CCA 72 bp TGCCGGTGGCGCTCCGGATCTCCACCCCAGCGGGCTTaGGGGACTCCGGCGCGGGTTCCCTGCTCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: CRWRSGSPPQRA*GTPARVPCSPP
Trigger: GGGAGGAGAGCAGGGAACCCGCGCCGGAGTCCCCCAAGCCCGCTGGGGTGGAGATCCGGAGCGCCACCGGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS CAA 72 bp TTGCCGGTGGCGCTCCGGATCTCCACCCCAGCGGGCTaGGGGGACTCCGGCGCGGGTTCCCTGCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LPVALRISTPAG*GDSGAGSLLSS
Trigger: GGAGGAGAGCAGGGAACCCGCGCCGGAGTCCCCCAAGCCCGCTGGGGTGGAGATCCGGAGCGCCACCGGCAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS GCA 72 bp TGCCACCGTACTTCTGCCGTGGGACCTGATCTGTGGTaGCCGGACGGGCCAAGTACACAGGCAGGTCGTCCT +
Preference number: 6 (lower is better)
Translates to: CHRTSAVGPDLW*PDGPSTQAGRP
Trigger: AGGACGACCTGCCTGTGTACTTGGCCCGTCCGGGCACCACAGATCAGGTCCCACGGCAGAAGTACGGTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS CCA 72 bp ACATGCCACCGTACTTCTGCCGTGGGACCTGATCTGTaGTGCCCGGACGGGCCAAGTACACAGGCAGGTCGT +
Preference number: 6 (lower is better)
Translates to: TCHRTSAVGPDL*CPDGPSTQAGR
Trigger: ACGACCTGCCTGTGTACTTGGCCCGTCCGGGCACCACAGATCAGGTCCCACGGCAGAAGTACGGTGGCATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS GCA 72 bp GCTGTCCCACACTCAGGGCATCAAAATCCAACGTCTTaGTCTCGAAGGCACCCTCCACGTTGCAGAACATGC +
Preference number: 6 (lower is better)
Translates to: AVPHSGHQNPTS*SRRHPPRCRTC
Trigger: GCATGTTCTGCAACGTGGAGGGTGCCTTCGAGAGCAAGACGTTGGATTTTGATGCCCTGAGTGTGGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121805.9
CDS CCA 72 bp AGGGAAGAACATTCCATGGACCACCCAGATAAAGGATaGCTAAGGAAGGAATCGGTCTCGCTTGCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: REEHSMDHPDKG*LRKESVSLACR
Trigger: CCGGCAGGCAAGCGAGACCGATTCCTTCCTTAGCCATCCTTTATCTGGGTGGTCCATGGAATGTTCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237707.2