Pregenerated sensors for DPYSL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022048Ensembl transcript IDs: ENSMUST00000022629.9
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGCACCCTTGCTGGGATCTGCTTGGTGGCGCATGTCTGCATGTTaGATGCAGCTCCGTGTGGGGTGGATGGCTAGGCTTGGGTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: GAPLLGSAWWRMSAC*MQLRVGWMARLGCG Trigger: ACCACACCCAAGCCTAGCCATCCACCCCACACGGAGCTGCATCCAACATGCAGACATGCGCCACCAAGCAGATCCCAGCAAGGGTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR CCA 90 bp | ACCCGCCTCTTCTCAACAGCTGACCCGAAGAGTAAGGGATGGGGATaGAGACACATGGAACCTTTCCAGAGGGGCGGCCCTAGCCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: TRLFSTADPKSKGWG*RHMEPFQRGGPSLP Trigger: TGGCAGGCTAGGGCCGCCCCTCTGGAAAGGTTCCATGTGTCTCCATCCCCATCCCTTACTCTTCGGGTCAGCTGTTGAGAAGAGGCGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR GCA 90 bp | GGGGATGGAGACACATGGAACCTTTCCAGAGGGGCGGCCCTAGCCTaGCAGCCTCGGAATCAGCTTAATGGTTACATAATTGCATCATTA | + |
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Preference number: 1 (lower is better) Translates to: GDGDTWNLSRGAALA*QPRNQLNGYIIASL Trigger: TAATGATGCAATTATGTAACCATTAAGCTGATTCCGAGGCTGGCAGGCTAGGGCCGCCCCTCTGGAAAGGTTCCATGTGTCTCCATCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR CCA 90 bp | CAGGGAGACTGGTCTCAGCTTGGGGGCTGGGTTTACAGATTTGACTaGAAACTGTCACTTCTACAGCCTAACTCCTCATCTTTCCACCAC | + |
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Preference number: 1 (lower is better) Translates to: QGDWSQLGGWVYRFD*KLSLLQPNSSSFHH Trigger: GTGGTGGAAAGATGAGGAGTTAGGCTGTAGAAGTGACAGTTTCCAGTCAAATCTGTAAACCCAGCCCCCAAGCTGAGACCAGTCTCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR TCA 90 bp | CCAAAAGGGCCACGGCCCCATACAAGAAACATCAGGAGTAAATGGTaGAGAGCTGCAAGTTTCTCAGAATCCAAACAAATAAACAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: PKGPRPHTRNIRSKW*RAASFSESKQINRE Trigger: CTCCCTGTTTATTTGTTTGGATTCTGAGAAACTTGCAGCTCTTCACCATTTACTCCTGATGTTTCTTGTATGGGGCCGTGGCCCTTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR CCA 90 bp | GTGTCTGGCAAGCCTCAAGCTCAGCCACCTCCTAGTGATGGGAATTaGATAGCACCAATCTTAACAGAAACTAGGATAGCACAAAACTAT | + |
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Preference number: 1 (lower is better) Translates to: VSGKPQAQPPPSDGN*IAPILTETRIAQNY Trigger: ATAGTTTTGTGCTATCCTAGTTTCTGTTAAGATTGGTGCTATCCAATTCCCATCACTAGGAGGTGGCTGAGCTTGAGGCTTGCCAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR TCA 90 bp | CTAACACTGCTTACAGGGACCTGTAAACACATCTGGAAAGAAATATaGCAGAAGTCAGCAAGTACAGAAAGAAGCCAGCTAGTGAAGACC | + |
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Preference number: 1 (lower is better) Translates to: LTLLTGTCKHIWKEI*QKSASTERSQLVKT Trigger: GGTCTTCACTAGCTGGCTTCTTTCTGTACTTGCTGACTTCTGTCATATTTCTTTCCAGATGTGTTTACAGGTCCCTGTAAGCAGTGTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCCATCTTGGCTGGCTCCGCCACAGGGAGACTGGTCTCAGCTTGGGGGCTCGCATGTCTGCATGTTaGATGCAGCTCCGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: WPHLGWLRHRETGLSLGARMSAC*MQLRVG Trigger: CCCCACACGGAGCTGCATCCAACATGCAGACATGCG...AGCCCCCAAGCTGAGACCAGTCTCCCTGTGGCGGAGCCAGCCAAGATGGGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR GCA 90 bp | GGATGCAGCTCCGTGTGGGGTGGATGGCTAGGCTTGGGTGTGGTGTTCATGACTCCAGGGGAGACCGAGTaGAGGGGGCCCAAGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GCSSVWGGWLGLGVVFMTPGETE*RGPKRK Trigger: CTTCCTCTTGGGCCCCCTGCACTCGGTCTCCCCTGG...AGTCATGAACACCACACCCAAGCCTAGCCATCCACCCCACACGGAGCTGCATCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCCCATCTTGGCTGGCTCCGCCACAGGGAGACTGGTCTCAGCTTGGGGGCTGTCTTTCCACCACATGTaGCTCTATTCTTGGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: GPILAGSATGRLVSAWGLSFHHM*LYSWPT Trigger: TGTGGGCCAAGAATAGAGTCACATGTGGTGGAAAGA...CAGCCCCCAAGCTGAGACCAGTCTCCCTGTGGCGGAGCCAGCCAAGATGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCTCCTCCACAGAGAGAATGGCCCCATCTTGGCTGGCTCCGCCACAGGGAGATCTGCTCAGGCTATaGCTGAGACCAAACTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: RGSSTERMAPSWLAPPQGDLLRL*LRPNWV Trigger: AACCCAGTTTGGTCTCAGGCATAGCCTGAGCAGATC...TCCCTGTGGCGGAGCCAGCCAAGATGGGGCCATTCTCTCTGTGGAGGAGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR TCA 90 bp | GGGTTTACAGATTTGACTGGAAACTGTCACTTCTACAGCCTAACTCCTCATCTTGCATGGCCAAGGATGTaGCTGGGGCACCCTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GFTDLTGNCHFYSLTPHLAWPRM*LGHPCW Trigger: CCAGCAAGGGTGCCCCAGTCACATCCTTGGCCATGC...AAGATGAGGAGTTAGGCTGTAGAAGTGACAGTTTCCAGTCAAATCTGTAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR TCA 90 bp | AGTACAGAAAGAAGCCAGCTAGTGAAGACCTGTCACTGTGACAGGAAGAGGAAGTGCTCAGGCTATGCCTaGGACCAAACTGGGTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: STERSQLVKTCHCDRKRKCSGYA*DQTGLP Trigger: AGGCAACCCAGTTTGGTCTCAGGCATAGCCTGAGCA...CTTCCTCTTCCTGTCACAGTGACAGGTCTTCACTAGCTGGCTTCTTTCTGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR CCA 90 bp | CTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTCCGCCACAGGGAGACTaGTCTCAGCTTGGGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LTRTAEIFRFKTVVLYCVPPQGD*SQLGGW Trigger: CCAGCCCCCAAGCTGAGACCAGTCTCCCTGTGGCGG...AACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR GCA 90 bp | GCGAGCCAACGGGTAAACATGCTTACACGGACTGCGGAAATCTTCAGGTTTAAACAGGAAGGTGCTAACTaGATGGCCAAGGATGTGACT | + |
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Preference number: 2 (lower is better) Translates to: ASQRVNMLTRTAEIFRFKQEGAN*MAKDVT Trigger: AGTCACATCCTTGGCCATGCAGTTAGCACCTTCCTG...TTTAAACCTGAAGATTTCCGCAGTCCGTGTAAGCATGTTTACCCGTTGGCTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR CCA 90 bp | AGTACAGAAAGAAGCCAGCTAGTGAAGACCTGTCACTGTGACAGGAAGAGGAAGCCGAAGAGTAAGGGATaGGGATGGAGACACATGGAA | + |
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Preference number: 2 (lower is better) Translates to: STERSQLVKTCHCDRKRKPKSKG*GWRHME Trigger: TTCCATGTGTCTCCATCCCCATCCCTTACTCTTCGG...CTTCCTCTTCCTGTCACAGTGACAGGTCTTCACTAGCTGGCTTCTTTCTGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR GCA 90 bp | CGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTGTGTTGACCCTTGCTGGGATCTaGTTGGTGGCGCATGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: RTAEIFRFKTVVLYCVVLTLAGI*LVAHVC Trigger: GCAGACATGCGCCACCAAGCAGATCCCAGCAAGGGT...CAACACAACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR CCA 90 bp | CTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTGGATGCAGCTCCGTGTaGGGTGGATGGCTAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LTRTAEIFRFKTVVLYCVGCSSV*GGWLGL Trigger: CAAGCCTAGCCATCCACCCCACACGGAGCTGCATCC...AACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR TCA 90 bp | GGGGCTGGGTTTACAGATTTGACTGGAAACTGTCACTTCTACAGCCTAACTCCTCAAAATCTAGGCCAATaGAGAAAACCCGCCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: GAGFTDLTGNCHFYSLTPQNLGQ*RKPASS Trigger: AGAAGAGGCGGGTTTTCTTCATTGGCCTAGATTTTG...AGGAGTTAGGCTGTAGAAGTGACAGTTTCCAGTCAAATCTGTAAACCCAGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR GCA 90 bp | AGCGGTAAATCCTACAATGATTTAGAGCATCAAGTCACTGCAGTTATTCAGTTCGCCCCAGGAACTGGCTaGCCACAGCAACTATCACAG | + |
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Preference number: 2 (lower is better) Translates to: SGKSYNDLEHQVTAVIQFAPGTG*PQQLSQ Trigger: CTGTGATAGTTGCTGTGGGCAGCCAGTTCCTGGGGC...GAACTGAATAACTGCAGTGACTTGATGCTCTAAATCATTGTAGGATTTACCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR CCA 90 bp | CTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTGGAAGCCCCAGGAACTaGCTGCCCACAGCAACTATC | + |
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Preference number: 2 (lower is better) Translates to: LTRTAEIFRFKTVVLYCVGSPRN*LPTATI Trigger: GATAGTTGCTGTGGGCAGCCAGTTCCTGGGGCTTCC...AACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR GCA 90 bp | CAACGGGTAAACATGCTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGAGACCAAACTGGGTTaGCTGGCTTTAAGAGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: QRVNMLTRTAEIFRFKTVETKLG*LALRAD Trigger: GTCTGCTCTTAAAGCCAGGCAACCCAGTTTGGTCTC...AACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAGCATGTTTACCCGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR TCA 90 bp | AGCGGTAAATCCTACAATGATTTAGAGCATCAAGTCACTGCAGTTATTCAGTTCCAGGAAGAGGAAGGGTaGCAGATAGGAGGTGACATG | + |
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Preference number: 2 (lower is better) Translates to: SGKSYNDLEHQVTAVIQFQEEEG*QIGGDM Trigger: CATGTCACCTCCTATCTGTCACCCTTCCTCTTCCTG...GAACTGAATAACTGCAGTGACTTGATGCTCTAAATCATTGTAGGATTTACCGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR CCA 90 bp | TTAGGATGTCCAGTTCAAGACCCGAGGATTAATATTGAATCAGGCTTTCAATTTCTGGGATCTGCTTGGTaGCGCATGTCTGCATGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LGCPVQDPRINIESGFQFLGSAW*RMSACW Trigger: CCAACATGCAGACATGCGCCACCAAGCAGATCCCAG...AAATTGAAAGCCTGATTCAATATTAATCCTCGGGTCTTGAACTGGACATCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR CCA 90 bp | CAACGGGTAAACATGCTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGACGTACGAAAATGGTaGAGAACCTTCAAAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: QRVNMLTRTAEIFRFKTVDVRKW*RTFKRS Trigger: AGACCTTTTGAAGGTTCTCCACCATTTTCGTACGTC...AACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAGCATGTTTACCCGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR CCA 72 bp | GGGGCTCCTCCACAGAGAGAATGGCCCCATCTTGGCTaGCTCCGCCACAGGGAGACTGGTCTCAGCTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: GAPPQREWPHLG*LRHRETGLSLG Trigger: CCCCAAGCTGAGACCAGTCTCCCTGTGGCGGAGCCAGCCAAGATGGGGCCATTCTCTCTGTGGAGGAGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR GCA 72 bp | GGCACCCTTGCTGGGATCTGCTTGGTGGCGCATGTCTaGATGTTGGATGCAGCTCCGTGTGGGGTGGATGGC | + |
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Preference number: 3 (lower is better) Translates to: GTLAGICLVAHV*MLDAAPCGVDG Trigger: GCCATCCACCCCACACGGAGCTGCATCCAACATGCAGACATGCGCCACCAAGCAGATCCCAGCAAGGGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR CCA 72 bp | GGAAGGGGCTCCTCCACAGAGAGAATGGCCCCATCTTaGCTGGCTCCGCCACAGGGAGACTGGTCTCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: GRGSSTERMAPS*LAPPQGDWSQL Trigger: AAGCTGAGACCAGTCTCCCTGTGGCGGAGCCAGCCAAGATGGGGCCATTCTCTCTGTGGAGGAGCCCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR CCA 72 bp | CTGACCCGAAGAGTAAGGGATGGGGATGGAGACACATaGAACCTTTCCAGAGGGGCGGCCCTAGCCTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LTRRVRDGDGDT*NLSRGAALACQ Trigger: CTGGCAGGCTAGGGCCGCCCCTCTGGAAAGGTTCCATGTGTCTCCATCCCCATCCCTTACTCTTCGGGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR GCA 72 bp | TGGGATCTGCTTGGTGGCGCATGTCTGCATGTTGGATaGAGCTCCGTGTGGGGTGGATGGCTAGGCTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: WDLLGGACLHVG*SSVWGGWLGLG Trigger: ACCCAAGCCTAGCCATCCACCCCACACGGAGCTGCATCCAACATGCAGACATGCGCCACCAAGCAGATCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR GCA 72 bp | GGCCAAGGATGTGACTGGGGCACCCTTGCTGGGATCTaGTTGGTGGCGCATGTCTGCATGTTGGATGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: GQGCDWGTLAGI*LVAHVCMLDAA Trigger: AGCTGCATCCAACATGCAGACATGCGCCACCAAGCAGATCCCAGCAAGGGTGCCCCAGTCACATCCTTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR CCA 72 bp | GGTGGCGCATGTCTGCATGTTGGATGCAGCTCCGTGTaGGGTGGATGGCTAGGCTTGGGTGTGGTGTTCATG | + |
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Preference number: 3 (lower is better) Translates to: GGACLHVGCSSV*GGWLGLGVVFM Trigger: CATGAACACCACACCCAAGCCTAGCCATCCACCCCACACGGAGCTGCATCCAACATGCAGACATGCGCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR CCA 72 bp | ATGGCCCCATCTTGGCTGGCTCCGCCACAGGGAGACTaGTCTCAGCTTGGGGGCTGGGTTTACAGATTTGAC | + |
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Preference number: 3 (lower is better) Translates to: MAPSWLAPPQGD*SQLGGWVYRFD Trigger: GTCAAATCTGTAAACCCAGCCCCCAAGCTGAGACCAGTCTCCCTGTGGCGGAGCCAGCCAAGATGGGGCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR TCA 72 bp | CATGACAGGAAGGTGCTAACTGCATGGCCAAGGATGTaGCTGGGGCACCCTTGCTGGGATCTGCTTGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: HDRKVLTAWPRM*LGHPCWDLLGG Trigger: GCCACCAAGCAGATCCCAGCAAGGGTGCCCCAGTCACATCCTTGGCCATGCAGTTAGCACCTTCCTGTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR CCA 72 bp | TTGCTGGGATCTGCTTGGTGGCGCATGTCTGCATGTTaGATGCAGCTCCGTGTGGGGTGGATGGCTAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: LLGSAWWRMSAC*MQLRVGWMARL Trigger: AAGCCTAGCCATCCACCCCACACGGAGCTGCATCCAACATGCAGACATGCGCCACCAAGCAGATCCCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR CCA 72 bp | TTCTCAACAGCTGACCCGAAGAGTAAGGGATGGGGATaGAGACACATGGAACCTTTCCAGAGGGGCGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: FSTADPKSKGWG*RHMEPFQRGGP Trigger: AGGGCCGCCCCTCTGGAAAGGTTCCATGTGTCTCCATCCCCATCCCTTACTCTTCGGGTCAGCTGTTGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR CCA 72 bp | CGCCTCTTCTCAACAGCTGACCCGAAGAGTAAGGGATaGGGATGGAGACACATGGAACCTTTCCAGAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: RLFSTADPKSKG*GWRHMEPFQRG Trigger: GCCCCTCTGGAAAGGTTCCATGTGTCTCCATCCCCATCCCTTACTCTTCGGGTCAGCTGTTGAGAAGAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR CAA 90 bp | AAAGGCTGGAAGGGGCTCCTCCACAGAGAGAATGGCCCCATCTTGGCTGGCTCCGCTGGGTTTACAGATTaGACTGGAAACTGTCACTTC | + |
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Preference number: 3 (lower is better) Translates to: KGWKGLLHRENGPILAGSAGFTD*TGNCHF Trigger: GAAGTGACAGTTTCCAGTCAAATCTGTAAACCCAGC...GGAGCCAGCCAAGATGGGGCCATTCTCTCTGTGGAGGAGCCCCTTCCAGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR CCA 72 bp | AGGCTTGGGTGTGGTGTTCATGACTGTGTAGGGACTTaGGTGAGAGAATTCAGAAACTCCAGGGGAGACCGA | + |
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Preference number: 3 (lower is better) Translates to: RLGCGVHDCVGT*VREFRNSRGDR Trigger: TCGGTCTCCCCTGGAGTTTCTGAATTCTCTCACCCAAGTCCCTACACAGTCATGAACACCACACCCAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR-3UTR CAA 90 bp | AAAAGTACCTTTCTGGCTACACACATGATCAGCTTTAGCACTGAAAGGTCCCCCCTTGCTGGGATCTGCTaGGTGGCGCATGTCTGCATG | + |
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Preference number: 3 (lower is better) Translates to: KSTFLATHMISFSTERSPLAGIC*VAHVCM Trigger: CATGCAGACATGCGCCACCAAGCAGATCCCAGCAAG...GGGGGACCTTTCAGTGCTAAAGCTGATCATGTGTGTAGCCAGAAAGGTACTTTT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR TCA 72 bp | GAAGGCAGCTCAGGGCAATTCACTATATCTTCCCCATaGCAGGAAGGTGCTAACTGCATGGCCAAGGATGTG | + |
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Preference number: 3 (lower is better) Translates to: EGSSGQFTISSP*QEGANCMAKDV Trigger: CACATCCTTGGCCATGCAGTTAGCACCTTCCTGTCATGGGGAAGATATAGTGAATTGCCCTGAGCTGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR GCA 72 bp | AGATCTGCTCAGGCTATGCCTGAGACCAAACTGGGTTaGCTGGCTTTAAGAGCAGACAGAGTTAAGAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: RSAQAMPETKLG*LALRADRVKRK Trigger: TTTCCTCTTAACTCTGTCTGCTCTTAAAGCCAGGCAACCCAGTTTGGTCTCAGGCATAGCCTGAGCAGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR CCA 72 bp | TGGTCTCAGCTTGGGGGCTGGGTTTACAGATTTGACTaGAAACTGTCACTTCTACAGCCTAACTCCTCATCT | + |
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Preference number: 3 (lower is better) Translates to: WSQLGGWVYRFD*KLSLLQPNSSS Trigger: AGATGAGGAGTTAGGCTGTAGAAGTGACAGTTTCCAGTCAAATCTGTAAACCCAGCCCCCAAGCTGAGACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| 3UTR TCA 72 bp | CCACGGCCCCATACAAGAAACATCAGGAGTAAATGGTaGAGAGCTGCAAGTTTCTCAGAATCCAAACAAATA | + |
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Preference number: 3 (lower is better) Translates to: PRPHTRNIRSKW*RAASFSESKQI Trigger: TATTTGTTTGGATTCTGAGAAACTTGCAGCTCTTCACCATTTACTCCTGATGTTTCTTGTATGGGGCCGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR GCA 90 bp | TGGCCCCATCTTGGCTGGCTCCGCCACAGGGAGACTGGTCTCAGCTTGGGGGCTGTTCCGAACAGGTGGTaGCTGCTGCTTGGCAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: WPHLGWLRHRETGLSLGAVPNRW*LLLGRG Trigger: TCCCCTGCCAAGCAGCAGGCACCACCTGTTCGGAAC...AGCCCCCAAGCTGAGACCAGTCTCCCTGTGGCGGAGCCAGCCAAGATGGGGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CCA 90 bp | GGCCCCATCTTGGCTGGCTCCGCCACAGGGAGACTGGTCTCAGCTTGGGGGCTGGCACTGCCAGTGACTTaGAGGTCTCCACAGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: GPILAGSATGRLVSAWGLALPVT*RSPQDS Trigger: GCTGTCCTGTGGAGACCTCCAAGTCACTGGCAGTGC...CAGCCCCCAAGCTGAGACCAGTCTCCCTGTGGCGGAGCCAGCCAAGATGGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CCA 90 bp | AGGGGCTCCTCCACAGAGAGAATGGCCCCATCTTGGCTGGCTCCGCCACAGGGACCACGATGCGCTGGGTaGTGCGGCGGGGAATGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RGSSTERMAPSWLAPPQGPRCAG*CGGECC Trigger: ACAACATTCCCCGCCGCACCACCCAGCGCATCGTGG...TCCCTGTGGCGGAGCCAGCCAAGATGGGGCCATTCTCTCTGTGGAGGAGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR TCA 90 bp | GGCCCCATCTTGGCTGGCTCCGCCACAGGGAGACTGGTCTCAGCTTGGGGGCTGGAGCACCAGACAAGCTaGATCCAGACTGGTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GPILAGSATGRLVSAWGLEHQTS*IQTGAG Trigger: ACCTGCACCAGTCTGGATTCAGCTTGTCTGGTGCTC...CAGCCCCCAAGCTGAGACCAGTCTCCCTGTGGCGGAGCCAGCCAAGATGGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR GCA 90 bp | TGGCCCCATCTTGGCTGGCTCCGCCACAGGGAGACTGGTCTCAGCTTGGGGGCTAGTCACAGCAGGACTTaGTGTCAGCCCACTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WPHLGWLRHRETGLSLGASHSRT*CQPTPS Trigger: GGAGGGAGTGGGCTGACAGCAAGTCCTGCTGTGACT...AGCCCCCAAGCTGAGACCAGTCTCCCTGTGGCGGAGCCAGCCAAGATGGGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| 3UTR CAA 72 bp | TGGAAGGGGCTCCTCCACAGAGAGAATGGCCCCATCTaGGCTGGCTCCGCCACAGGGAGACTGGTCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WKGLLHRENGPI*AGSATGRLVSA Trigger: AGCTGAGACCAGTCTCCCTGTGGCGGAGCCAGCCAAGATGGGGCCATTCTCTCTGTGGAGGAGCCCCTTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR TCA 90 bp | GGATGCAGCTCCGTGTGGGGTGGATGGCTAGGCTTGGGTGTGGTGTTCATGACTTCAAGGGTGGGGAGGTaGCAAAGGCCGCAGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GCSSVWGGWLGLGVVFMTSRVGR*QRPQPW Trigger: CCAAGGCTGCGGCCTTTGTCACCTCCCCACCCTTGA...AGTCATGAACACCACACCCAAGCCTAGCCATCCACCCCACACGGAGCTGCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR TCA 90 bp | GGATGCAGCTCCGTGTGGGGTGGATGGCTAGGCTTGGGTGTGGTGTTCATGACTCCCTTCTTCCGTGCCTaGGCGATGACTTCAGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCSSVWGGWLGLGVVFMTPFFRA*AMTSAA Trigger: TGCGGCTGAAGTCATCGCTCAGGCACGGAAGAAGGG...AGTCATGAACACCACACCCAAGCCTAGCCATCCACCCCACACGGAGCTGCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CCA 90 bp | TGGATGCAGCTCCGTGTGGGGTGGATGGCTAGGCTTGGGTGTGGTGTTCATGACCAGGTTCCGAACAGGTaGTGCCTGCTGCTTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WMQLRVGWMARLGCGVHDQVPNR*CLLLGR Trigger: CCTGCCAAGCAGCAGGCACCACCTGTTCGGAACCTG...GTCATGAACACCACACCCAAGCCTAGCCATCCACCCCACACGGAGCTGCATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR GCA 90 bp | TGGTCTCAGCTTGGGGGCTGGGTTTACAGATTTGACTGGAAACTGTCACTTCTACAGGGGGTGCCACGATaGGCTGGGTGGTGCGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WSQLGGWVYRFDWKLSLLQGVPR*AGWCGG Trigger: CCCGCCGCACCACCCAGCGCATCGTGGCACCCCCTG...TAGAAGTGACAGTTTCCAGTCAAATCTGTAAACCCAGCCCCCAAGCTGAGACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR CCA 90 bp | AGGGGCTCCTCCACAGAGAGAATGGCCCCATCTTGGCTGGCTCCGCCACAGGGAATCACCATTCTGGAGTaGGCTTCGATGGTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: RGSSTERMAPSWLAPPQGITILE*ASMVFT Trigger: GGTGAAGACCATCGAAGCCCACTCCAGAATGGTGAT...TCCCTGTGGCGGAGCCAGCCAAGATGGGGCCATTCTCTCTGTGGAGGAGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR GCA 90 bp | GGATGCAGCTCCGTGTGGGGTGGATGGCTAGGCTTGGGTGTGGTGTTCATGACTTCCTGGATGCCCTTGTaGCACTCAGTGATGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: GCSSVWGGWLGLGVVFMTSWMPL*HSVMST Trigger: CGTGGACATCACTGAGTGGCACAAGGGCATCCAGGA...AGTCATGAACACCACACCCAAGCCTAGCCATCCACCCCACACGGAGCTGCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR CCA 90 bp | GGATGCAGCTCCGTGTGGGGTGGATGGCTAGGCTTGGGTGTGGTGTTCATGACTCGAGTTGAGAAAGTCTaGAGTGGTTGGGTCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCSSVWGGWLGLGVVFMTRVEKV*SGWVGA Trigger: AGCCCCGACCCAACCACTCCAGACTTTCTCAACTCG...AGTCATGAACACCACACCCAAGCCTAGCCATCCACCCCACACGGAGCTGCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| 3UTR CAA 72 bp | GCTAACTGCATGGCCAAGGATGTGACTGGGGCACCCTaGCTGGGATCTGCTTGGTGGCGCATGTCTGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ANCMAKDVTGAP*LGSAWWRMSAC Trigger: ACATGCAGACATGCGCCACCAAGCAGATCCCAGCAAGGGTGCCCCAGTCACATCCTTGGCCATGCAGTTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR CCA 90 bp | CGTGTGGGGTGGATGGCTAGGCTTGGGTGTGGTGTTCATGACTGTGTAGGGACTGCGGATGTCATTCCCTaGTCAGGCATCTGGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RVGWMARLGCGVHDCVGTADVIP*SGIWKR Trigger: TCGCTTCCAGATGCCTGACCAGGGAATGACATCCGC...AGTCCCTACACAGTCATGAACACCACACCCAAGCCTAGCCATCCACCCCACACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR CCA 90 bp | TGGTCTCAGCTTGGGGGCTGGGTTTACAGATTTGACTGGAAACTGTCACTTCTAGGTGCCACGATGCGCTaGGTGGTGCGGCGGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: WSQLGGWVYRFDWKLSLLGATMR*VVRRGM Trigger: CATTCCCCGCCGCACCACCCAGCGCATCGTGGCACC...TAGAAGTGACAGTTTCCAGTCAAATCTGTAAACCCAGCCCCCAAGCTGAGACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR GCA 90 bp | CGTGTGGGGTGGATGGCTAGGCTTGGGTGTGGTGTTCATGACTGTGTAGGGACTAGTTCCCTTCTTCCGTaGCTGAGCGATGACTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGWMARLGCGVHDCVGTSSLLP*LSDDFS Trigger: GCTGAAGTCATCGCTCAGGCACGGAAGAAGGGAACT...AGTCCCTACACAGTCATGAACACCACACCCAAGCCTAGCCATCCACCCCACACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR TCA 90 bp | TGGATGCAGCTCCGTGTGGGGTGGATGGCTAGGCTTGGGTGTGGTGTTCATGACGCTGGAATCGATCTTTaGAAGCCATGTACACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WMQLRVGWMARLGCGVHDAGIDL*KPCTRG Trigger: TCCTCGTGTACATGGCTTTCAAAGATCGATTCCAGC...GTCATGAACACCACACCCAAGCCTAGCCATCCACCCCACACGGAGCTGCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR GCA 90 bp | GGATGCAGCTCCGTGTGGGGTGGATGGCTAGGCTTGGGTGTGGTGTTCATGACTAGATCCAGGATCCTCTaGTGTTCCTCAGCAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: GCSSVWGGWLGLGVVFMTRSRIL*CSSAMM Trigger: CATCATTGCTGAGGAACAGCAGAGGATCCTGGATCT...AGTCATGAACACCACACCCAAGCCTAGCCATCCACCCCACACGGAGCTGCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR CCA 90 bp | CGTGTGGGGTGGATGGCTAGGCTTGGGTGTGGTGTTCATGACTGTGTAGGGACTGTGTCTTGGCAGAGATaGTCTTCACACTGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVGWMARLGCGVHDCVGTVSWQR*SSHCQG Trigger: ACCCTGACAGTGTGAAGACCATCTCTGCCAAGACAC...AGTCCCTACACAGTCATGAACACCACACCCAAGCCTAGCCATCCACCCCACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR GCA 90 bp | AAAGGCTGGAAGGGGCTCCTCCACAGAGAGAATGGCCCCATCTTGGCTGGCTCCTTCCATGTATATGTCTaGATAGAAGGACTGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: KGWKGLLHRENGPILAGSFHVYV*IEGLVI Trigger: GATGACCAGTCCTTCTATGCAGACATATACATGGAA...GGAGCCAGCCAAGATGGGGCCATTCTCTCTGTGGAGGAGCCCCTTCCAGCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR GCA 90 bp | AAAGGCTGGAAGGGGCTCCTCCACAGAGAGAATGGCCCCATCTTGGCTGGCTCCAGGTTTTCTCCTATTTaGTTGATCAACCCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGWKGLLHRENGPILAGSRFSPI*LINPSS Trigger: GGAAGATGGGTTGATCAAGCAAATAGGAGAAAACCT...GGAGCCAGCCAAGATGGGGCCATTCTCTCTGTGGAGGAGCCCCTTCCAGCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGTACCTTTCTGGCTACACACATGATCAGCTTTAGCACTGAAAGGTCCCCCCGAACAGGTGGTGCCTaGTGCTTGGCAGGGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSTFLATHMISFSTERSPRTGGA*CLAGDV Trigger: GACATCCCCTGCCAAGCAGCAGGCACCACCTGTTCG...GGGGGACCTTTCAGTGCTAAAGCTGATCATGTGTGTAGCCAGAAAGGTACTTTT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CCA 90 bp | TGGTCTCAGCTTGGGGGCTGGGTTTACAGATTTGACTGGAAACTGTCACTTCTAAAAGTCTGGAGTGGTTaGGTCGGGGCTCAAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WSQLGGWVYRFDWKLSLLKVWSG*VGAQGW Trigger: CCACCCTTGAGCCCCGACCCAACCACTCCAGACTTT...TAGAAGTGACAGTTTCCAGTCAAATCTGTAAACCCAGCCCCCAAGCTGAGACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR TCA 90 bp | AGCGGTAAATCCTACAATGATTTAGAGCATCAAGTCACTGCAGTTATTCAGTTCGTCCCTCGGGGCCCGTaGTGCCCAGATCCAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SGKSYNDLEHQVTAVIQFVPRGP*CPDPGS Trigger: GGATCCTGGATCTGGGCATCACGGGCCCCGAGGGAC...GAACTGAATAACTGCAGTGACTTGATGCTCTAAATCATTGTAGGATTTACCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR TCA 90 bp | TGGTCTCAGCTTGGGGGCTGGGTTTACAGATTTGACTGGAAACTGTCACTTCTATTCTCTGCGTGGACTTaGGCTATGGCACCGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: WSQLGGWVYRFDWKLSLLFSAWT*AMAPIS Trigger: GGATATCGGTGCCATAGCTCAAGTCCACGCAGAGAA...TAGAAGTGACAGTTTCCAGTCAAATCTGTAAACCCAGCCCCCAAGCTGAGACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR GCA 90 bp | AGTACAGAAAGAAGCCAGCTAGTGAAGACCTGTCACTGTGACAGGAAGAGGAAGCTGAATCCAGACTGGTaGAGGTTCCGAACAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: STERSQLVKTCHCDRKRKLNPDW*RFRTGG Trigger: ACCACCTGTTCGGAACCTGCACCAGTCTGGATTCAG...CTTCCTCTTCCTGTCACAGTGACAGGTCTTCACTAGCTGGCTTCTTTCTGTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CCA 90 bp | GCGAGCCAACGGGTAAACATGCTTACACGGACTGCGGAAATCTTCAGGTTTAAACGTGGACTTGAGCTATaGCACCGATATCCCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ASQRVNMLTRTAEIFRFKRGLEL*HRYPGS Trigger: TGATCCGGGATATCGGTGCCATAGCTCAAGTCCACG...TTTAAACCTGAAGATTTCCGCAGTCCGTGTAAGCATGTTTACCCGTTGGCTCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CCA 90 bp | CTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTGTCGGGGCTCAAGGGTaGGGAGGTGACAAAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LTRTAEIFRFKTVVLYCVVGAQG*GGDKGR Trigger: GCGGCCTTTGTCACCTCCCCACCCTTGAGCCCCGAC...AACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR TCA 90 bp | GCGAGCCAACGGGTAAACATGCTTACACGGACTGCGGAAATCTTCAGGTTTAAACAATCTTGCCACCTTTaGTCAGAAGACGATCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ASQRVNMLTRTAEIFRFKQSCHL*SEDDRS Trigger: CGAGCGATCGTCTTCTGATCAAAGGTGGCAAGATTG...TTTAAACCTGAAGATTTCCGCAGTCCGTGTAAGCATGTTTACCCGTTGGCTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR GCA 90 bp | AGCGGTAAATCCTACAATGATTTAGAGCATCAAGTCACTGCAGTTATTCAGTTCCGATGCGCTGGGTGGTaGGGCGGGGAATGTTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SGKSYNDLEHQVTAVIQFRCAGW*GGECCR Trigger: ACGACAACATTCCCCGCCGCACCACCCAGCGCATCG...GAACTGAATAACTGCAGTGACTTGATGCTCTAAATCATTGTAGGATTTACCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR GCA 90 bp | GGGTTTACAGATTTGACTGGAAACTGTCACTTCTACAGCCTAACTCCTCATCTTCAGATCCCACCGAGATaGGACCTTTCCGGGGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GFTDLTGNCHFYSLTPHLQIPPR*DLSGGK Trigger: TTTACCCCCGGAAAGGTCGCATCTCGGTGGGATCTG...AAGATGAGGAGTTAGGCTGTAGAAGTGACAGTTTCCAGTCAAATCTGTAAACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CCA 90 bp | AGCGGTAAATCCTACAATGATTTAGAGCATCAAGTCACTGCAGTTATTCAGTTCCTGGAGTCACCGTCTTaGGCGTCACAGACACCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SGKSYNDLEHQVTAVIQFLESPS*ASQTPR Trigger: GCGAGGTGTCTGTGACGCCCAAGACGGTGACTCCAG...GAACTGAATAACTGCAGTGACTTGATGCTCTAAATCATTGTAGGATTTACCGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR TCA 90 bp | CTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTGCCCACTCCCTCCACTaGTCAAAGGCAGCCAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTRTAEIFRFKTVVLYCVAHSLH*SKAANR Trigger: CCTATTGGCTGCCTTTGATCAGTGGAGGGAGTGGGC...AACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR TCA 90 bp | AGCGGTAAATCCTACAATGATTTAGAGCATCAAGTCACTGCAGTTATTCAGTTCGAGCCTTCAGTGACATaGAGTGTGCCGTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGKSYNDLEHQVTAVIQFEPSVT*SVPSSR Trigger: CCTGGAGGACGGCACACTTCATGTCACTGAAGGCTC...GAACTGAATAACTGCAGTGACTTGATGCTCTAAATCATTGTAGGATTTACCGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR TCA 90 bp | CGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTGTGTTGGTCCTGAGCCTTCAGTaGCATGAAGTGTGCCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTAEIFRFKTVVLYCVVLVLSLQ*HEVCRP Trigger: AGGACGGCACACTTCATGTCACTGAAGGCTCAGGAC...CAACACAACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR TCA 90 bp | AGCGGTAAATCCTACAATGATTTAGAGCATCAAGTCACTGCAGTTATTCAGTTCTCCGGGGGTAAAGGTTaGAGACTTTGGCTGCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGKSYNDLEHQVTAVIQFSGGKG*RLWLRW Trigger: CCAACGCAGCCAAAGTCTTCAACCTTTACCCCCGGA...GAACTGAATAACTGCAGTGACTTGATGCTCTAAATCATTGTAGGATTTACCGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR CCA 90 bp | CAACGGGTAAACATGCTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTAGAGGGCAGTTGGTCTaGTTGGCAATAGTGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRVNMLTRTAEIFRFKTVRGQLV*LAIVMD Trigger: GTCCATCACTATTGCCAACCAGACCAACTGCCCTCT...AACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAGCATGTTTACCCGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR CCA 90 bp | GGGTTTACAGATTTGACTGGAAACTGTCACTTCTACAGCCTAACTCCTCATCTTAAGCTGAATCCAGACTaGTGCAGGTTCCGAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GFTDLTGNCHFYSLTPHLKLNPD*CRFRTG Trigger: ACCTGTTCGGAACCTGCACCAGTCTGGATTCAGCTT...AAGATGAGGAGTTAGGCTGTAGAAGTGACAGTTTCCAGTCAAATCTGTAAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR TCA 90 bp | AGTACAGAAAGAAGCCAGCTAGTGAAGACCTGTCACTGTGACAGGAAGAGGAAGTTTCTCCTATTTGCTTaGTCAACCCATCTTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: STERSQLVKTCHCDRKRKFLLFA*STHLPC Trigger: ACATGGAAGATGGGTTGATCAAGCAAATAGGAGAAA...CTTCCTCTTCCTGTCACAGTGACAGGTCTTCACTAGCTGGCTTCTTTCTGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR TCA 90 bp | CTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTGAACAACATGGTCAATaGTCATGGTGGTTCCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTRTAEIFRFKTVVLYCVEQHGQ*SWWFPR Trigger: CCGGGGGAACCACCATGATCATTGACCATGTTGTTC...AACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR TCA 90 bp | CTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTGGGAATGTAGCGTCCTaGGCCTTCAGTGACATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTRTAEIFRFKTVVLYCVGNVAS*AFSDMK Trigger: CTTCATGTCACTGAAGGCTCAGGACGCTACATTCCC...AACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR GCA 90 bp | CTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTGTTGAAGACTTTGGCTaGGTTGGTGCTGGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTRTAEIFRFKTVVLYCVVEDFG*VGAGHS Trigger: GCTGTGACCAGCACCAACGCAGCCAAAGTCTTCAAC...AACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR TCA 90 bp | CTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTAGGACAGCAACGAGTTaGGAAAGTCTGGAGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTRTAEIFRFKTVVLYCVRTATS*ESLEWL Trigger: CAACCACTCCAGACTTTCTCAACTCGTTGCTGTCCT...AACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR CCA 90 bp | GGGTTTACAGATTTGACTGGAAACTGTCACTTCTACAGCCTAACTCCTCATCTTGGCTCAGGAACAACATaGTCAATGATCATGGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GFTDLTGNCHFYSLTPHLGSGTT*SMIMVV Trigger: AACCACCATGATCATTGACCATGTTGTTCCTGAGCC...AAGATGAGGAGTTAGGCTGTAGAAGTGACAGTTTCCAGTCAAATCTGTAAACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR CCA 90 bp | CTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTATCGCTCGTGATGCGTaGAATATTTTTCTTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTRTAEIFRFKTVVLYCVIARDA*NIFLPL Trigger: CAGGGGAAGAAAAATATTCCACGCATCACGAGCGAT...AACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR CCA 90 bp | TTAGGATGTCCAGTTCAAGACCCGAGGATTAATATTGAATCAGGCTTTCAATTTTGGGAATCCGTCAGCTaGAATCGATCTTTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGCPVQDPRINIESGFQFWESVS*NRSLKA Trigger: GGCTTTCAAAGATCGATTCCAGCTGACGGATTCCCA...AAATTGAAAGCCTGATTCAATATTAATCCTCGGGTCTTGAACTGGACATCCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS-3UTR CAA 90 bp | AGGGGCTCCTCCACAGAGAGAATGGCCCCATCTTGGCTGGCTCCGCCACAGGGATCCTCCTGGATGCCCTaGTGCCACTCAGTGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGSSTERMAPSWLAPPQGSSWMP*CHSVMS Trigger: GGACATCACTGAGTGGCACAAGGGCATCCAGGAGGA...TCCCTGTGGCGGAGCCAGCCAAGATGGGGCCATTCTCTCTGTGGAGGAGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS GCA 90 bp | AAGCTGAATCCAGACTGGTGCAGGTTCCGAACAGGTGGTGCCTGCTaGTTGGCAGGGGATGTCTTAGCTGATGAGGCTGGAGTCACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: KLNPDWCRFRTGGAC*LAGDVLADEAGVTV Trigger: GACGGTGACTCCAGCCTCATCAGCTAAGACATCCCCTGCCAAGCAGCAGGCACCACCTGTTCGGAACCTGCACCAGTCTGGATTCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
||
| CDS GCA 90 bp | GACAAGCTGAATCCAGACTGGTGCAGGTTCCGAACAGGTGGTGCCTaGTGCTTGGCAGGGGATGTCTTAGCTGATGAGGCTGGAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: DKLNPDWCRFRTGGA*CLAGDVLADEAGVT Trigger: GGTGACTCCAGCCTCATCAGCTAAGACATCCCCTGCCAAGCAGCAGGCACCACCTGTTCGGAACCTGCACCAGTCTGGATTCAGCTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | GGCCCCATCTTGGCTGGCTCCGCCACAGGGAGACTGGTCTCAGCTTGGGGGCTGTTTTCTCCTATTTGCTaGATCAACCCATCTTCCATG | + |
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Preference number: 5 (lower is better) Translates to: GPILAGSATGRLVSAWGLFSPIC*INPSSM Trigger: CATGGAAGATGGGTTGATCAAGCAAATAGGAGAAAA...CAGCCCCCAAGCTGAGACCAGTCTCCCTGTGGCGGAGCCAGCCAAGATGGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | GACATAATCGGGGCCATTCCTGTGTCTGGCAAGCCTCAAGCTCAGCCACCTCCTGGAATCAAGGTGAAGTaGTCCTTCCCCACAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: DIIGAIPVSGKPQAQPPPGIKVK*SFPTAF Trigger: GAAGGCTGTGGGGAAGGACAACTTCACCTTGATTCC...AGGAGGTGGCTGAGCTTGAGGCTTGCCAGACACAGGAATGGCCCCGATTATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | GGATGCAGCTCCGTGTGGGGTGGATGGCTAGGCTTGGGTGTGGTGTTCATGACTGCACTGTTGTGTGTCTaGGCAGAGATGGTCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: GCSSVWGGWLGLGVVFMTALLCV*AEMVFT Trigger: TGTGAAGACCATCTCTGCCAAGACACACAACAGTGC...AGTCATGAACACCACACCCAAGCCTAGCCATCCACCCCACACGGAGCTGCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | GACATAATCGGGGCCATTCCTGTGTCTGGCAAGCCTCAAGCTCAGCCACCTCCTAGCTGGAATCGATCTTaGAAAGCCATGTACACGAGG | + |
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Preference number: 5 (lower is better) Translates to: DIIGAIPVSGKPQAQPPPSWNRS*KAMYTR Trigger: CCTCGTGTACATGGCTTTCAAAGATCGATTCCAGCT...AGGAGGTGGCTGAGCTTGAGGCTTGCCAGACACAGGAATGGCCCCGATTATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | GGGGCTGGGTTTACAGATTTGACTGGAAACTGTCACTTCTACAGCCTAACTCCTGGCACTGCCAGTGACTaGGAGGTCTCCACAGGACAG | + |
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Preference number: 5 (lower is better) Translates to: GAGFTDLTGNCHFYSLTPGTASD*EVSTGQ Trigger: CTGTCCTGTGGAGACCTCCAAGTCACTGGCAGTGCC...AGGAGTTAGGCTGTAGAAGTGACAGTTTCCAGTCAAATCTGTAAACCCAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS TCA 90 bp | TTTGTACACAAAGTCAGGGAAGGGCTTCCGGGGAATGTAGCGTCCTaGGCCTTCAGTGACATGAAGTGTGCCGTCCTCCAGGACAATCTT | + |
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Preference number: 5 (lower is better) Translates to: FVHKVREGLPGNVAS*AFSDMKCAVLQDNL Trigger: AAGATTGTCCTGGAGGACGGCACACTTCATGTCACTGAAGGCTCAGGACGCTACATTCCCCGGAAGCCCTTCCCTGACTTTGTGTACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS TCA 90 bp | TCAGCACTTCATAGATCTGGGAATCCGTCAGCTGGAATCGATCTTTaGAAGCCATGTACACGAGGAAGGAGTTTACCCCGTGGTCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SALHRSGNPSAGIDL*KPCTRGRSLPRGPS Trigger: TGAAGGACCACGGGGTAAACTCCTTCCTCGTGTACATGGCTTTCAAAGATCGATTCCAGCTGACGGATTCCCAGATCTATGAAGTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | GCGAGCCAACGGGTAAACATGCTTACACGGACTGCGGAAATCTTCAGGTTTAAAATTCTCTGCGTGGACTaGAGCTATGGCACCGATATC | + |
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Preference number: 5 (lower is better) Translates to: ASQRVNMLTRTAEIFRFKILCVD*SYGTDI Trigger: GATATCGGTGCCATAGCTCAAGTCCACGCAGAGAAT...TTTAAACCTGAAGATTTCCGCAGTCCGTGTAAGCATGTTTACCCGTTGGCTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | AGTACAGAAAGAAGCCAGCTAGTGAAGACCTGTCACTGTGACAGGAAGAGGAAGACATACAGAGGGCAGTaGGTCTGGTTGGCAATAGTG | + |
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Preference number: 5 (lower is better) Translates to: STERSQLVKTCHCDRKRKTYRGQ*VWLAIV Trigger: CACTATTGCCAACCAGACCAACTGCCCTCTGTATGT...CTTCCTCTTCCTGTCACAGTGACAGGTCTTCACTAGCTGGCTTCTTTCTGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | AAAAGTACCTTTCTGGCTACACACATGATCAGCTTTAGCACTGAAAGGTCCCCCCAGGACAGCAACGAGTaGAGAAAGTCTGGAGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: KSTFLATHMISFSTERSPQDSNE*RKSGVV Trigger: AACCACTCCAGACTTTCTCAACTCGTTGCTGTCCTG...GGGGGACCTTTCAGTGCTAAAGCTGATCATGTGTGTAGCCAGAAAGGTACTTTT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | AGTACAGAAAGAAGCCAGCTAGTGAAGACCTGTCACTGTGACAGGAAGAGGAAGAGCCTGCTCCTTGCTTaGATGCGTTTGTACACAAAG | + |
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Preference number: 5 (lower is better) Translates to: STERSQLVKTCHCDRKRKSLLLA*MRLYTK Trigger: CTTTGTGTACAAACGCATCAAAGCAAGGAGCAGGCT...CTTCCTCTTCCTGTCACAGTGACAGGTCTTCACTAGCTGGCTTCTTTCTGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | TTAGGATGTCCAGTTCAAGACCCGAGGATTAATATTGAATCAGGCTTTCAATTTGCTGGAGTCACCGTCTaGGGCGTCACAGACACCTCG | + |
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Preference number: 5 (lower is better) Translates to: LGCPVQDPRINIESGFQFAGVTV*GVTDTS Trigger: CGAGGTGTCTGTGACGCCCAAGACGGTGACTCCAGC...AAATTGAAAGCCTGATTCAATATTAATCCTCGGGTCTTGAACTGGACATCCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | CTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTGGGCAGTTGGTCTGGTaGGCAATAGTGATGGACCGG | + |
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Preference number: 5 (lower is better) Translates to: LTRTAEIFRFKTVVLYCVGQLVW*AIVMDR Trigger: CCGGTCCATCACTATTGCCAACCAGACCAACTGCCC...AACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | CGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTGTGTTGACAATCTTGCCACCTTaGATCAGAAGACGATCGCTC | + |
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Preference number: 5 (lower is better) Translates to: RTAEIFRFKTVVLYCVVLTILPP*IRRRSL Trigger: GAGCGATCGTCTTCTGATCAAAGGTGGCAAGATTGT...CAACACAACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | CAACGGGTAAACATGCTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTCAGGTTTTCTCCTATTaGCTTGATCAACCCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: QRVNMLTRTAEIFRFKTVQVFSY*LDQPIF Trigger: GAAGATGGGTTGATCAAGCAAATAGGAGAAAACCTG...AACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAGCATGTTTACCCGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | TTAGGATGTCCAGTTCAAGACCCGAGGATTAATATTGAATCAGGCTTTCAATTTTACTCAAGAGCACTGTaGTGTGTCTTGGCAGAGATG | + |
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Preference number: 5 (lower is better) Translates to: LGCPVQDPRINIESGFQFYSRAL*CVLAEM Trigger: CATCTCTGCCAAGACACACAACAGTGCTCTTGAGTA...AAATTGAAAGCCTGATTCAATATTAATCCTCGGGTCTTGAACTGGACATCCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS-3UTR CAA 90 bp | CTTACACGGACTGCGGAAATCTTCAGGTTTAAAACTGTTGTGTTGTATTGTGTTATGCCTTCAAAGATGTaGTACTCAAGAGCACTGTTG | + |
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Preference number: 5 (lower is better) Translates to: LTRTAEIFRFKTVVLYCVMPSKM*YSRALL Trigger: CAACAGTGCTCTTGAGTACAACATCTTTGAAGGCAT...AACACAATACAACACAACAGTTTTAAACCTGAAGATTTCCGCAGTCCGTGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS TCA 72 bp | TCACAGCAGGACTTGCTGTCAGCCCACTCCCTCCACTaGTCAAAGGCAGCCAATAGGCTCGTCCCGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SQQDLLSAHSLH*SKAANRLVPGS Trigger: TGAGCCCGGGACGAGCCTATTGGCTGCCTTTGATCAGTGGAGGGAGTGGGCTGACAGCAAGTCCTGCTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS GCA 72 bp | CCAGACTGGTGCAGGTTCCGAACAGGTGGTGCCTGCTaGTTGGCAGGGGATGTCTTAGCTGATGAGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PDWCRFRTGGAC*LAGDVLADEAG Trigger: TCCAGCCTCATCAGCTAAGACATCCCCTGCCAAGCAGCAGGCACCACCTGTTCGGAACCTGCACCAGTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS CAA 72 bp | GGGGATGTCTTAGCTGATGAGGCTGGAGTCACCGTCTaGGGCGTCACAGACACCTCGCATACCGGTCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: GDVLADEAGVTV*GVTDTSHTGPS Trigger: TGACGGACCGGTATGCGAGGTGTCTGTGACGCCCAAGACGGTGACTCCAGCCTCATCAGCTAAGACATCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS CAA 72 bp | GACTGGTGCAGGTTCCGAACAGGTGGTGCCTGCTGCTaGGCAGGGGATGTCTTAGCTGATGAGGCTGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: DWCRFRTGGACC*AGDVLADEAGV Trigger: GACTCCAGCCTCATCAGCTAAGACATCCCCTGCCAAGCAGCAGGCACCACCTGTTCGGAACCTGCACCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS CAA 90 bp | TGCTTGGCAGGGGATGTCTTAGCTGATGAGGCTGGAGTCACCGTCTaGGGCGTCACAGACACCTCGCATACCGGTCCGTCATACAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: CLAGDVLADEAGVTV*GVTDTSHTGPSYRP Trigger: TGGCCTGTATGACGGACCGGTATGCGAGGTGTCTGTGACGCCCAAGACGGTGACTCCAGCCTCATCAGCTAAGACATCCCCTGCCAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS CAA 90 bp | CTGAATCCAGACTGGTGCAGGTTCCGAACAGGTGGTGCCTGCTGCTaGGCAGGGGATGTCTTAGCTGATGAGGCTGGAGTCACCGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LNPDWCRFRTGGACC*AGDVLADEAGVTVL Trigger: CAAGACGGTGACTCCAGCCTCATCAGCTAAGACATCCCCTGCCAAGCAGCAGGCACCACCTGTTCGGAACCTGCACCAGTCTGGATTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS CCA 72 bp | ACAGGACAGCAACGAGTTGAGAAAGTCTGGAGTGGTTaGGTCGGGGCTCAAGGGTGGGGAGGTGACAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: TGQQRVEKVWSG*VGAQGWGGDKG Trigger: GCCTTTGTCACCTCCCCACCCTTGAGCCCCGACCCAACCACTCCAGACTTTCTCAACTCGTTGCTGTCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS TCA 72 bp | AAAGTCAGGGAAGGGCTTCCGGGGAATGTAGCGTCCTaGGCCTTCAGTGACATGAAGTGTGCCGTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: KVREGLPGNVAS*AFSDMKCAVLQ Trigger: CTGGAGGACGGCACACTTCATGTCACTGAAGGCTCAGGACGCTACATTCCCCGGAAGCCCTTCCCTGACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS GCA 72 bp | AATCCAGACTGGTGCAGGTTCCGAACAGGTGGTGCCTaGTGCTTGGCAGGGGATGTCTTAGCTGATGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: NPDWCRFRTGGA*CLAGDVLADEA Trigger: AGCCTCATCAGCTAAGACATCCCCTGCCAAGCAGCAGGCACCACCTGTTCGGAACCTGCACCAGTCTGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS CAA 72 bp | CCAGTGACTTGGAGGTCTCCACAGGACAGCAACGAGTaGAGAAAGTCTGGAGTGGTTGGGTCGGGGCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: PVTWRSPQDSNE*RKSGVVGSGLK Trigger: CTTGAGCCCCGACCCAACCACTCCAGACTTTCTCAACTCGTTGCTGTCCTGTGGAGACCTCCAAGTCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS TCA 72 bp | TCCTCAGCAATGATGTCACCATTCTCTGCGTGGACTTaGGCTATGGCACCGATATCCCGGATCACGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSAMMSPFSAWT*AMAPISRITLS Trigger: GCTGAGCGTGATCCGGGATATCGGTGCCATAGCTCAAGTCCACGCAGAGAATGGTGACATCATTGCTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS CCA 72 bp | TCCCTCCGGGAATCACCATTCTGGAGTGGGCTTCGATaGTCTTCACCCCTCCTGGTACAATCAGGTTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SLRESPFWSGLR*SSPLLVQSGFL Trigger: GAGAAAACCTGATTGTACCAGGAGGGGTGAAGACCATCGAAGCCCACTCCAGAATGGTGATTCCCGGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS GCA 72 bp | CCTCTGCTGTTCCTCAGCAATGATGTCACCATTCTCTaGGTGGACTTGAGCTATGGCACCGATATCCCGGAT | + |
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Preference number: 6 (lower is better) Translates to: PLLFLSNDVTIL*VDLSYGTDIPD Trigger: ATCCGGGATATCGGTGCCATAGCTCAAGTCCACGCAGAGAATGGTGACATCATTGCTGAGGAACAGCAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS CAA 72 bp | TTCCTCAGCAATGATGTCACCATTCTCTGCGTGGACTaGAGCTATGGCACCGATATCCCGGATCACGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: FLSNDVTILCVD*SYGTDIPDHAQ Trigger: CTGAGCGTGATCCGGGATATCGGTGCCATAGCTCAAGTCCACGCAGAGAATGGTGACATCATTGCTGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS CAA 90 bp | CCTCTGCTGTTCCTCAGCAATGATGTCACCATTCTCTGCGTGGACTaGAGCTATGGCACCGATATCCCGGATCACGCTCAGCACTTCATA | + |
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Preference number: 6 (lower is better) Translates to: PLLFLSNDVTILCVD*SYGTDIPDHAQHFI Trigger: TATGAAGTGCTGAGCGTGATCCGGGATATCGGTGCCATAGCTCAAGTCCACGCAGAGAATGGTGACATCATTGCTGAGGAACAGCAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS CAA 72 bp | ATCACTTTGGTGACATACAGAGGGCAGTTGGTCTGGTaGGCAATAGTGATGGACCGGTTCACAGCTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: ITLVTYRGQLVW*AIVMDRFTASA Trigger: GGCTGAAGCTGTGAACCGGTCCATCACTATTGCCAACCAGACCAACTGCCCTCTGTATGTCACCAAAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS CCA 72 bp | CTCATCACTTTGGTGACATACAGAGGGCAGTTGGTCTaGTTGGCAATAGTGATGGACCGGTTCACAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LITLVTYRGQLV*LAIVMDRFTAS Trigger: TGAAGCTGTGAACCGGTCCATCACTATTGCCAACCAGACCAACTGCCCTCTGTATGTCACCAAAGTGATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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| CDS CCA 72 bp | CAAAGATGTTGTACTCAAGAGCACTGTTGTGTGTCTTaGCAGAGATGGTCTTCACACTGTCAGGGTCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: QRCCTQEHCCVS*QRWSSHCQGPR Trigger: TCTGGGACCCTGACAGTGTGAAGACCATCTCTGCCAAGACACACAACAGTGCTCTTGAGTACAACATCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022629.9 |
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