Pregenerated sensors for DPYD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033308Ensembl transcript IDs: ENSMUST00000039177.12, ENSMUST00000149101.3
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCAGACATTCACCTCGATATCTTATTTCATTAGGAACACCGCTTTaGTATTCAAATAAAAATGGCCAGGACTCCATCCCTGGTCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: TRHSPRYLISLGTPL*YSNKNGQDSIPGQS Trigger: AGACTGACCAGGGATGGAGTCCTGGCCATTTTTATTTGAATACCAAAGCGGTGTTCCTAATGAAATAAGATATCGAGGTGAATGTCTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| 3UTR TCA 90 bp | AATCTTGAAGCCTATGGCTCAGCGCTGTGTAATCTAGCCCTTGTTTaGACATTAATTGCTCTCATAATGAAGGTGACTAAAAGAAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: NLEAYGSALCNLALV*TLIALIMKVTKRSR Trigger: TCTGCTTCTTTTAGTCACCTTCATTATGAGAGCAATTAATGTTCAAACAAGGGCTAGATTACACAGCGCTGAGCCATAGGCTTCAAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| 3UTR-3UTR TCA 90 bp | TTAACATTTATGCAGCTTCAAAACCAAAAGTACAGCCTCAAGGGAAGTTTCTCCGCTGAATGCTGGCGATaGACTCATTTGTTCCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LTFMQLQNQKYSLKGSFSAECWR*THLFPQ Trigger: TTGGGGGAACAAATGAGTTCATCGCCAGCATTCAGC...GGAGAAACTTCCCTTGAGGCTGTACTTTTGGTTTTGAAGCTGCATAAATGTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149101.3 |
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| 3UTR CCA 72 bp | TCACAGCACACAACGGACAGAGCACATCCAATTAACTaGTCTGCAGTTACTCACCAGCTACCTCAGAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: SQHTTDRAHPIN*SAVTHQLPQRR Trigger: TCTTCTCTGAGGTAGCTGGTGAGTAACTGCAGACCAGTTAATTGGATGTGCTCTGTCCGTTGTGTGCTGTGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| 3UTR GCA 72 bp | ATGAAGGTGACTAAAAGAAGCAGATCTAGCTGTCTGTaGTCAGTGAAAGTGGGCCATTCACCAGACATTCAC | + |
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Preference number: 3 (lower is better) Translates to: MKVTKRSRSSCL*SVKVGHSPDIH Trigger: GTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAGACAGCTAGATCTGCTTCTTTTAGTCACCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| 3UTR-3UTR CAA 90 bp | GGTGGTCAACAGCATTTTAGTCAGGAAATAATCTCCCTTTCCGTGTCCAGCACCTTACAAAGCGTTTCCTaGGAAACGGTTTCCTGTATA | + |
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Preference number: 3 (lower is better) Translates to: GGQQHFSQEIISLSVSSTLQSVS*ETVSCI Trigger: TATACAGGAAACCGTTTCCAAGGAAACGCTTTGTAA...GGTGCTGGACACGGAAAGGGAGATTATTTCCTGACTAAAATGCTGTTGACCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| 3UTR TCA 72 bp | GCCTATGGCTCAGCGCTGTGTAATCTAGCCCTTGTTTaGACATTAATTGCTCTCATAATGAAGGTGACTAAA | + |
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Preference number: 3 (lower is better) Translates to: AYGSALCNLALV*TLIALIMKVTK Trigger: TTTAGTCACCTTCATTATGAGAGCAATTAATGTTCAAACAAGGGCTAGATTACACAGCGCTGAGCCATAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| 3UTR TCA 72 bp | AAACCAAAAGTACAGCCTCAAGGGAAGTTTCTCCACTaGCAAATTAATACCTTAGAGAACAGAGCTGAATGC | + |
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Preference number: 3 (lower is better) Translates to: KPKVQPQGKFLH*QINTLENRAEC Trigger: GCATTCAGCTCTGTTCTCTAAGGTATTAATTTGTCAGTGGAGAAACTTCCCTTGAGGCTGTACTTTTGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149101.3 |
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| 3UTR CCA 72 bp | TCACCTCGATATCTTATTTCATTAGGAACACCGCTTTaGTATTCAAATAAAAATGGCCAGGACTCCATCCCT | + |
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Preference number: 3 (lower is better) Translates to: SPRYLISLGTPL*YSNKNGQDSIP Trigger: AGGGATGGAGTCCTGGCCATTTTTATTTGAATACCAAAGCGGTGTTCCTAATGAAATAAGATATCGAGGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| 3UTR TCA 72 bp | TTACAAAGCGTTTCCTTGGAAACGGTTTCCTGTATATaGAAGTGCACTCCGTTCCAAAATAGTTCATTTCGT | + |
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Preference number: 3 (lower is better) Translates to: LQSVSLETVSCI*KCTPFQNSSFR Trigger: ACGAAATGAACTATTTTGGAACGGAGTGCACTTTCATATACAGGAAACCGTTTCCAAGGAAACGCTTTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| 3UTR GCA 72 bp | TACGGCATAGGGCAATTTAGAAATTGTCACGCTAATTaGCATGAAAAAGTTAATTTTTCACAGCACACAACG | + |
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Preference number: 3 (lower is better) Translates to: YGIGQFRNCHAN*HEKVNFSQHTT Trigger: CGTTGTGTGCTGTGAAAAATTAACTTTTTCATGGCAATTAGCGTGACAATTTCTAAATTGCCCTATGCCGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | GGCCAGGACTCCATCCCTGGTCAGTCTGACACCTGTTTCAGGTGGTCAACAGCAAGGCTGAGAAGGCACTaGGGTTCCATATTGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GQDSIPGQSDTCFRWSTARLRRH*GSILCL Trigger: CAGGCACAATATGGAACCTCAGTGCCTTCTCAGCCT...TGCTGTTGACCACCTGAAACAGGTGTCAGACTGACCAGGGATGGAGTCCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR GCA 90 bp | GGCCAGGACTCCATCCCTGGTCAGTCTGACACCTGTTTCAGGTGGTCAACAGCATTTAGCCGCACCGTCTaGTCTTCATCTTCCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: GQDSIPGQSDTCFRWSTAFSRTV*SSSSTQ Trigger: CTGGGTGGAAGATGAAGAGCAGACGGTGCGGCTAAA...TGCTGTTGACCACCTGAAACAGGTGTCAGACTGACCAGGGATGGAGTCCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | GGCCAGGACTCCATCCCTGGTCAGTCTGACACCTGTTTCAGGTGGTCAACAGCAGTTTCTTGGCTGCGGTaGAACGCAGAGTTGCATGAG | + |
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Preference number: 4 (lower is better) Translates to: GQDSIPGQSDTCFRWSTAVSWLR*NAELHE Trigger: CTCATGCAACTCTGCGTTCCACCGCAGCCAAGAAAC...TGCTGTTGACCACCTGAAACAGGTGTCAGACTGACCAGGGATGGAGTCCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | GGCCAGGACTCCATCCCTGGTCAGTCTGACACCTGTTTCAGGTGGTCAACAGCACTTGCTTTCCATCGTTaGCAGATTCCACTGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GQDSIPGQSDTCFRWSTALAFHR*QIPLWC Trigger: ACACCACAGTGGAATCTGTCAACGATGGAAAGCAAG...TGCTGTTGACCACCTGAAACAGGTGTCAGACTGACCAGGGATGGAGTCCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | GGTGGTCAACAGCATTTTAGTCAGGAAATAATCTCCCTTTCCGTGTCCAGCACCTGGTGTGCTAGTGGCTaGTGTCGCACTGGCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: GGQQHFSQEIISLSVSSTWCASG*CRTGKA Trigger: GGCCTTGCCAGTGCGACACCAGCCACTAGCACACCA...GGTGCTGGACACGGAAAGGGAGATTATTTCCTGACTAAAATGCTGTTGACCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR GCA 90 bp | GGCCAGGACTCCATCCCTGGTCAGTCTGACACCTGTTTCAGGTGGTCAACAGCAACCTCAGTAGCAAACTaGTGCAGCCCACCAATATTA | + |
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Preference number: 4 (lower is better) Translates to: GQDSIPGQSDTCFRWSTATSVAN*CSPPIL Trigger: TAATATTGGTGGGCTGCAGCAGTTTGCTACTGAGGT...TGCTGTTGACCACCTGAAACAGGTGTCAGACTGACCAGGGATGGAGTCCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR GCA 90 bp | GGCCAGGACTCCATCCCTGGTCAGTCTGACACCTGTTTCAGGTGGTCAACAGCACTGTGGGATGTTCATTaGTTTGAACACCTCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GQDSIPGQSDTCFRWSTALWDVH*FEHLSS Trigger: GCTACTGAGGTGTTCAAAGCAATGAACATCCCACAG...TGCTGTTGACCACCTGAAACAGGTGTCAGACTGACCAGGGATGGAGTCCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | GGCCAGGACTCCATCCCTGGTCAGTCTGACACCTGTTTCAGGTGGTCAACAGCAGAGCTCCATCTCCTCTaGAACAGCTCGAATATTAAC | + |
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Preference number: 4 (lower is better) Translates to: GQDSIPGQSDTCFRWSTAELHLL*NSSNIN Trigger: GTTAATATTCGAGCTGTTCCAGAGGAGATGGAGCTC...TGCTGTTGACCACCTGAAACAGGTGTCAGACTGACCAGGGATGGAGTCCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | GGCCAGGACTCCATCCCTGGTCAGTCTGACACCTGTTTCAGGTGGTCAACAGCAATGCTTCTTTCACTTTaGGATCCTCCAGGACAGATC | + |
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Preference number: 4 (lower is better) Translates to: GQDSIPGQSDTCFRWSTAMLLSL*DPPGQI Trigger: GATCTGTCCTGGAGGATCCCAAAGTGAAAGAAGCAT...TGCTGTTGACCACCTGAAACAGGTGTCAGACTGACCAGGGATGGAGTCCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | GGCCAGGACTCCATCCCTGGTCAGTCTGACACCTGTTTCAGGTGGTCAACAGCACTTGTGAATGTACCATaGAGCTTGCTTTCCATCGTT | + |
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Preference number: 4 (lower is better) Translates to: GQDSIPGQSDTCFRWSTALVNVP*SLLSIV Trigger: AACGATGGAAAGCAAGCTTCATGGTACATTCACAAG...TGCTGTTGACCACCTGAAACAGGTGTCAGACTGACCAGGGATGGAGTCCTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR GCA 90 bp | GGTGGTCAACAGCATTTTAGTCAGGAAATAATCTCCCTTTCCGTGTCCAGCACCGGAACCCGAACAGCTTaGCTAACCCAGCGACAGATG | + |
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Preference number: 4 (lower is better) Translates to: GGQQHFSQEIISLSVSSTGTRTA*LTQRQM Trigger: CATCTGTCGCTGGGTTAGGCAAGCTGTTCGGGTTCC...GGTGCTGGACACGGAAAGGGAGATTATTTCCTGACTAAAATGCTGTTGACCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | GGCCAGGACTCCATCCCTGGTCAGTCTGACACCTGTTTCAGGTGGTCAACAGCATTTTGCTTGCTGCTATaGTTTTCTTGCGCTGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: GQDSIPGQSDTCFRWSTAFCLLL*FSCAVQ Trigger: TTGAACAGCGCAAGAAAATCATAGCAGCAAGCAAAA...TGCTGTTGACCACCTGAAACAGGTGTCAGACTGACCAGGGATGGAGTCCTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | AAAGCGTTTCCTTGGAAACGGTTTCCTGTATATGAAAGTGCACTCCGTTCCAAAGTGGGACAGCTCTTCTaGCAGGGAGCATCTGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: KAFPWKRFPVYESALRSKVGQLF*QGASAH Trigger: GTGCGCAGATGCTCCCTGCCAGAAGAGCTGTCCCAC...TTTGGAACGGAGTGCACTTTCATATACAGGAAACCGTTTCCAAGGAAACGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | ACAGAGCACATCCAATTAACTGGTCTGCAGTTACTCACCAGCTACCTCAGAGAAGCAAAGCACGGGCAATaGCGGTCACAGCTCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: TEHIQLTGLQLLTSYLREAKHGQ*RSQLSK Trigger: CTTTGAGAGCTGTGACCGCCATTGCCCGTGCTTTGC...TTCTCTGAGGTAGCTGGTGAGTAACTGCAGACCAGTTAATTGGATGTGCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | TCTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTCGGAGGAGGCAGCGATaGGTTTCTGATCTGTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: SVLSESGPFTRHSPRYLIRRRQR*VSDLWD Trigger: ATCCCACAGATCAGAAACCCATCGCTGCCTCCTCCG...AATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | TCTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTCACGGCTCCCCTTATaGATGGCAATGGAGAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: SVLSESGPFTRHSPRYLISRLPL*MAMESD Trigger: GTCACTCTCCATTGCCATCCATAAGGGGAGCCGTGA...AATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | GGTGGTCAACAGCATTTTAGTCAGGAAATAATCTCCCTTTCCGTGTCCAGCACCACCTGCAAACACCCATaGTTCACTGGTTTGCATGGT | + |
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Preference number: 4 (lower is better) Translates to: GGQQHFSQEIISLSVSSTTCKHP*FTGLHG Trigger: ACCATGCAAACCAGTGAACCATGGGTGTTTGCAGGT...GGTGCTGGACACGGAAAGGGAGATTATTTCCTGACTAAAATGCTGTTGACCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | TTAGGAACACCGCTTTGGTATTCAAATAAAAATGGCCAGGACTCCATCCCTGGTCAAGGCCAAAGGGATTaGGAAACCTCAACCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LGTPLWYSNKNGQDSIPGQGQRD*ETSTLP Trigger: TGGCAGGGTTGAGGTTTCCCAATCCCTTTGGCCTTG...ACCAGGGATGGAGTCCTGGCCATTTTTATTTGAATACCAAAGCGGTGTTCCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | ACAGAGCACATCCAATTAACTGGTCTGCAGTTACTCACCAGCTACCTCAGAGAAATAGCGCTGCATACCTaGAGAACTGAAGCACCACTA | + |
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Preference number: 4 (lower is better) Translates to: TEHIQLTGLQLLTSYLREIALHT*RTEAPL Trigger: TAGTGGTGCTTCAGTTCTTCAGGTATGCAGCGCTAT...TTCTCTGAGGTAGCTGGTGAGTAACTGCAGACCAGTTAATTGGATGTGCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | GGTGGTCAACAGCATTTTAGTCAGGAAATAATCTCCCTTTCCGTGTCCAGCACCCCACAACTTGTTCCATaGTGCTCATCTCACCAAATG | + |
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Preference number: 4 (lower is better) Translates to: GGQQHFSQEIISLSVSSTPQLVP*CSSHQM Trigger: CATTTGGTGAGATGAGCATCATGGAACAAGTTGTGG...GGTGCTGGACACGGAAAGGGAGATTATTTCCTGACTAAAATGCTGTTGACCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | AAAGCGTTTCCTTGGAAACGGTTTCCTGTATATGAAAGTGCACTCCGTTCCAAACTAACGGTAGGCAGGTaGGTTTCTGGATCGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: KAFPWKRFPVYESALRSKLTVGR*VSGSNW Trigger: CCAGTTCGATCCAGAAACTCACCTGCCTACCGTTAG...TTTGGAACGGAGTGCACTTTCATATACAGGAAACCGTTTCCAAGGAAACGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | GGTGGTCAACAGCATTTTAGTCAGGAAATAATCTCCCTTTCCGTGTCCAGCACCACACCCATGGTTCACTaGTTTGCATGGTTTCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: GGQQHFSQEIISLSVSSTTPMVH*FAWFLD Trigger: ATCCAGAAACCATGCAAACCAGTGAACCATGGGTGT...GGTGCTGGACACGGAAAGGGAGATTATTTCCTGACTAAAATGCTGTTGACCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | ACAGAGCACATCCAATTAACTGGTCTGCAGTTACTCACCAGCTACCTCAGAGAAAGCAACGCGTGGAACTaGTTTCCCTTTCTGATGACT | + |
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Preference number: 4 (lower is better) Translates to: TEHIQLTGLQLLTSYLRESNAWN*FPFLMT Trigger: AGTCATCAGAAAGGGAAACCAGTTCCACGCGTTGCT...TTCTCTGAGGTAGCTGGTGAGTAACTGCAGACCAGTTAATTGGATGTGCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | AAAGCGTTTCCTTGGAAACGGTTTCCTGTATATGAAAGTGCACTCCGTTCCAAAGCAGCGATGGGTTTCTaGTCTGTGGGATGTTCATTG | + |
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Preference number: 4 (lower is better) Translates to: KAFPWKRFPVYESALRSKAAMGF*SVGCSL Trigger: CAATGAACATCCCACAGATCAGAAACCCATCGCTGC...TTTGGAACGGAGTGCACTTTCATATACAGGAAACCGTTTCCAAGGAAACGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | AAAGCGTTTCCTTGGAAACGGTTTCCTGTATATGAAAGTGCACTCCGTTCCAAAAAGTTGTCCCCCGGATaGTTCTTGGTGAGACGTTTG | + |
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Preference number: 4 (lower is better) Translates to: KAFPWKRFPVYESALRSKKLSPG*FLVRRL Trigger: CAAACGTCTCACCAAGAATCATCCGGGGGACAACTT...TTTGGAACGGAGTGCACTTTCATATACAGGAAACCGTTTCCAAGGAAACGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | CTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTAGTTCGGTGACACTGTaGCACCAATATGCAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LCSVKVGHSPDIHLDILFSSVTL*HQYAAV Trigger: AACAGCTGCATATTGGTGTCACAGTGTCACCGAACT...AAATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | TTAGGAACACCGCTTTGGTATTCAAATAAAAATGGCCAGGACTCCATCCCTGGTCTTTCTCTGGAGAGGTaGGCAAGCTGTGTTTTGATC | + |
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Preference number: 4 (lower is better) Translates to: LGTPLWYSNKNGQDSIPGLSLER*ASCVLI Trigger: GATCAAAACACAGCTTGCTCACCTCTCCAGAGAAAG...ACCAGGGATGGAGTCCTGGCCATTTTTATTTGAATACCAAAGCGGTGTTCCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR GCA 90 bp | TTAGGAACACCGCTTTGGTATTCAAATAAAAATGGCCAGGACTCCATCCCTGGTCACAACATCACCACCTaGAAACACCCATGGTTCACT | + |
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Preference number: 4 (lower is better) Translates to: LGTPLWYSNKNGQDSIPGHNITT*KHPWFT Trigger: AGTGAACCATGGGTGTTTGCAGGTGGTGATGTTGTG...ACCAGGGATGGAGTCCTGGCCATTTTTATTTGAATACCAAAGCGGTGTTCCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | AAAGCGTTTCCTTGGAAACGGTTTCCTGTATATGAAAGTGCACTCCGTTCCAAACCTTATGGATGGCAATaGAGAGTGACAGGCGCACAT | + |
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Preference number: 4 (lower is better) Translates to: KAFPWKRFPVYESALRSKPYGWQ*RVTGAH Trigger: ATGTGCGCCTGTCACTCTCCATTGCCATCCATAAGG...TTTGGAACGGAGTGCACTTTCATATACAGGAAACCGTTTCCAAGGAAACGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | TTAATTTTTCACAGCACACAACGGACAGAGCACATCCAATTAACTGGTCTGCAGCAGCCTTTAGTTCGGTaGCACTGTGACACCAATATG | + |
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Preference number: 4 (lower is better) Translates to: LIFHSTQRTEHIQLTGLQQPLVR*HCDTNM Trigger: CATATTGGTGTCACAGTGTCACCGAACTAAAGGCTG...CTGCAGACCAGTTAATTGGATGTGCTCTGTCCGTTGTGTGCTGTGAAAAATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | TCTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTGTTGTAACTGCACATaGTGCTGGCGATCAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: SVLSESGPFTRHSPRYLICCNCT*CWRSGY Trigger: ATATCCTGATCGCCAGCATCATGTGCAGTTACAACA...AATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR TCA 90 bp | CCAATTAACTGGTCTGCAGTTACTCACCAGCTACCTCAGAGAAGAGTTATTCCAGATAAAGCAGGGCTTTaGGTCCAGTGCAGTAATCTT | + |
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Preference number: 4 (lower is better) Translates to: PINWSAVTHQLPQRRVIPDKAGL*VQCSNL Trigger: AAGATTACTGCACTGGACTCAAAGCCCTGCTTTATC...TGGAATAACTCTTCTCTGAGGTAGCTGGTGAGTAACTGCAGACCAGTTAATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR GCA 90 bp | TTAGGAACACCGCTTTGGTATTCAAATAAAAATGGCCAGGACTCCATCCCTGGTTCCACCTTCCTTTGCTaGTCTTGCGATGCTTACAAT | + |
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Preference number: 4 (lower is better) Translates to: LGTPLWYSNKNGQDSIPGSTFLC*SCDAYN Trigger: ATTGTAAGCATCGCAAGAGCAGCAAAGGAAGGTGGA...ACCAGGGATGGAGTCCTGGCCATTTTTATTTGAATACCAAAGCGGTGTTCCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | GGTGGTCAACAGCATTTTAGTCAGGAAATAATCTCCCTTTCCGTGTCCAGCACCTGGGTTTCTGATCTGTaGGATGTTCATTGCTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: GGQQHFSQEIISLSVSSTWVSDL*DVHCFE Trigger: TTCAAAGCAATGAACATCCCACAGATCAGAAACCCA...GGTGCTGGACACGGAAAGGGAGATTATTTCCTGACTAAAATGCTGTTGACCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | GGTGGTCAACAGCATTTTAGTCAGGAAATAATCTCCCTTTCCGTGTCCAGCACCGAGTCATTTCATCGGTaGAAAGGCTTTTACCACAAA | + |
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Preference number: 4 (lower is better) Translates to: GGQQHFSQEIISLSVSSTESFHR*KGFYHK Trigger: TTTGTGGTAAAAGCCTTTCCACCGATGAAATGACTC...GGTGCTGGACACGGAAAGGGAGATTATTTCCTGACTAAAATGCTGTTGACCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS-3UTR CCA 90 bp | TTAGGAACACCGCTTTGGTATTCAAATAAAAATGGCCAGGACTCCATCCCTGGTGGTTTGCATGGTTTCTaGATTTACTTCTGGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LGTPLWYSNKNGQDSIPGGLHGF*IYFWET Trigger: GGTCTCCCAGAAGTAAATCCAGAAACCATGCAAACC...ACCAGGGATGGAGTCCTGGCCATTTTTATTTGAATACCAAAGCGGTGTTCCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CCA 90 bp | CCAATTAACTGGTCTGCAGTTACTCACCAGCTACCTCAGAGAAGAGTTATTCCAATGACTTATAATGGGTaGACTCTGACCATCCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PINWSAVTHQLPQRRVIPMTYNG*TLTIPV Trigger: GACTGGGATGGTCAGAGTCCACCCATTATAAGTCAT...TGGAATAACTCTTCTCTGAGGTAGCTGGTGAGTAACTGCAGACCAGTTAATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CCA 90 bp | CCAATTAACTGGTCTGCAGTTACTCACCAGCTACCTCAGAGAAGAGTTATTCCATTAAAGTGCTTTCTCTaGAGAGGTGAGCAAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PINWSAVTHQLPQRRVIPLKCFL*RGEQAV Trigger: CACAGCTTGCTCACCTCTCCAGAGAAAGCACTTTAA...TGGAATAACTCTTCTCTGAGGTAGCTGGTGAGTAACTGCAGACCAGTTAATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR TCA 90 bp | CTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTCACCAAGGTCCTTCATaGGCTCAATCTCAAAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCSVKVGHSPDIHLDILFHQGPS*AQSQNS Trigger: TGAATTTTGAGATTGAGCTCATGAAGGACCTTGGTG...AAATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR TCA 90 bp | ACCAGCTACCTCAGAGAAGAGTTATTCCATTTTATGACCATTAATTTGTCACTGGATGGCAATGGAGAGTaGCAGGCGCACATTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSYLREELFHFMTINLSLDGNGE*QAHIPV Trigger: AACAGGAATGTGCGCCTGTCACTCTCCATTGCCATC...CAGTGACAAATTAATGGTCATAAAATGGAATAACTCTTCTCTGAGGTAGCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | AAAGCGTTTCCTTGGAAACGGTTTCCTGTATATGAAAGTGCACTCCGTTCCAAATGGTTGATAAGGTGTTaGCCTGGAAACCATCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KAFPWKRFPVYESALRSKWLIRC*PGNHPD Trigger: ATCAGGATGGTTTCCAGGGCAACACCTTATCAACCA...TTTGGAACGGAGTGCACTTTCATATACAGGAAACCGTTTCCAAGGAAACGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CCA 90 bp | ACAGAGCACATCCAATTAACTGGTCTGCAGTTACTCACCAGCTACCTCAGAGAAAAATATGGTCCTTTTTaGGTTCTGGCAAGCCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: TEHIQLTGLQLLTSYLREKYGPF*VLASLF Trigger: GAATAGGCTTGCCAGAACCCAAAAAGGACCATATTT...TTCTCTGAGGTAGCTGGTGAGTAACTGCAGACCAGTTAATTGGATGTGCTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTAAGCCTTGGAAAATATaGTCCTTTTTGGGTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCSVKVGHSPDIHLDILFKPWKI*SFLGSG Trigger: GCCAGAACCCAAAAAGGACCATATTTTCCAAGGCTT...AAATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CCA 90 bp | TTAGGAACACCGCTTTGGTATTCAAATAAAAATGGCCAGGACTCCATCCCTGGTGCTTTTGGCGACAAGTaGCAGAAAGTCTTTAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LGTPLWYSNKNGQDSIPGAFGDK*QKVFRC Trigger: ACATCTAAAGACTTTCTGCCACTTGTCGCCAAAAGC...ACCAGGGATGGAGTCCTGGCCATTTTTATTTGAATACCAAAGCGGTGTTCCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CCA 90 bp | ACCAGCTACCTCAGAGAAGAGTTATTCCATTTTATGACCATTAATTTGTCACTGGGCCCTTCGAATCATTaGTGTGCTAGTGGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSYLREELFHFMTINLSLGPSNH*CASGWC Trigger: ACACCAGCCACTAGCACACCAATGATTCGAAGGGCC...CAGTGACAAATTAATGGTCATAAAATGGAATAACTCTTCTCTGAGGTAGCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CCA 90 bp | TCAAAGAGTGAGTACGGCATAGGGCAATTTAGAAATTGTCACGCTAATTGCCATAAGCCTCAGCCATTTTaGAGAGTTCCATCCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKSEYGIGQFRNCHANCHKPQPF*RVPSSH Trigger: GTGACTGGATGGAACTCTCCAAAATGGCTGAGGCTT...ATGGCAATTAGCGTGACAATTTCTAAATTGCCCTATGCCGTACTCACTCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CCA 90 bp | ACCAGCTACCTCAGAGAAGAGTTATTCCATTTTATGACCATTAATTTGTCACTGGAGCTCAGCAACGCGTaGAACTGGTTTCCCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSYLREELFHFMTINLSLELSNA*NWFPFL Trigger: CAGAAAGGGAAACCAGTTCCACGCGTTGCTGAGCTC...CAGTGACAAATTAATGGTCATAAAATGGAATAACTCTTCTCTGAGGTAGCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR TCA 90 bp | AAAGCGTTTCCTTGGAAACGGTTTCCTGTATATGAAAGTGCACTCCGTTCCAAAGCATACCTGAAGAACTaGAGCACCACTATGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KAFPWKRFPVYESALRSKAYLKN*STTMKK Trigger: TTTCTTCATAGTGGTGCTTCAGTTCTTCAGGTATGC...TTTGGAACGGAGTGCACTTTCATATACAGGAAACCGTTTCCAAGGAAACGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTGCCTATTCCAATAAATaGAGCTCTGTAGCCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCSVKVGHSPDIHLDILFAYSNK*SSVAIF Trigger: GAAAATGGCTACAGAGCTGCATTTATTGGAATAGGC...AAATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | TCTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTATGTACCATGAAGCTTaGTTTCCATCGTTGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLSESGPFTRHSPRYLIMYHEA*FPSLTD Trigger: ATCTGTCAACGATGGAAAGCAAGCTTCATGGTACAT...AATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTTTCCTTTGCTGCTCTTaGGATGCTTACAATATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCSVKVGHSPDIHLDILFFLCCS*DAYNIS Trigger: ACTGATATTGTAAGCATCGCAAGAGCAGCAAAGGAA...AAATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTACCTCAGAGAAGAGTTATTCCATTTTATGACCATTAATTTGTCACTGTGCTCCACCTTCCTTTaGTGCTCTTGCGATGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TSYLREELFHFMTINLSLCSTFL*CSCDAY Trigger: GTAAGCATCGCAAGAGCAGCAAAGGAAGGTGGAGCA...CAGTGACAAATTAATGGTCATAAAATGGAATAACTCTTCTCTGAGGTAGCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | TCTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTCTGATTTTGCTTGCTaGTATGATTTTCTTGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLSESGPFTRHSPRYLISDFAC*YDFLAL Trigger: CAGCGCAAGAAAATCATAGCAGCAAGCAAAATCAGA...AATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CCA 90 bp | TCATTTGTTCCCCCAATAATGAAGAATGACTTTTTCTTTACCACATCTGTGACTGTTTCTTGGCTGCGGTaGAACGCAGAGTTGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFVPPIMKNDFFFTTSVTVSWLR*NAELHE Trigger: CTCATGCAACTCTGCGTTCCACCGCAGCCAAGAAAC...AGTCACAGATGTGGTAAAGAAAAAGTCATTCTTCATTATTGGGGGAACAAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149101.3 |
||
| CDS-3UTR CCA 90 bp | TCTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTTCTGGATTTACTTCTaGGAGACCCCATCTGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVLSESGPFTRHSPRYLIFWIYF*ETPSVK Trigger: TTTAACAGATGGGGTCTCCCAGAAGTAAATCCAGAA...AATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR TCA 90 bp | TCAAAGAGTGAGTACGGCATAGGGCAATTTAGAAATTGTCACGCTAATTGCCATTGCTTACAATATCAGTaGCATTTGGGGTCAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKSEYGIGQFRNCHANCHCLQYQ*HLGSTW Trigger: CCAAGTTGACCCCAAATGTCACTGATATTGTAAGCA...ATGGCAATTAGCGTGACAATTTCTAAATTGCCCTATGCCGTACTCACTCTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR TCA 90 bp | AAAGCGTTTCCTTGGAAACGGTTTCCTGTATATGAAAGTGCACTCCGTTCCAAAGAGCAAGCTGTGTTTTaGTCTTTCTGTCTGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KAFPWKRFPVYESALRSKEQAVF*SFCLIL Trigger: CAAAATCAGACAGAAAGATCAAAACACAGCTTGCTC...TTTGGAACGGAGTGCACTTTCATATACAGGAAACCGTTTCCAAGGAAACGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR TCA 90 bp | AAAGCGTTTCCTTGGAAACGGTTTCCTGTATATGAAAGTGCACTCCGTTCCAAATCCCAGGTATTGCAGTaGTTTTCCAATTACATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KAFPWKRFPVYESALRSKSQVLQ*FSNYIL Trigger: AAGGATGTAATTGGAAAATCACTGCAATACCTGGGA...TTTGGAACGGAGTGCACTTTCATATACAGGAAACCGTTTCCAAGGAAACGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | TCTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTCACCAAGAGTCGTGTaGTTGATGTCATCAAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: SVLSESGPFTRHSPRYLISPRVV*LMSSKL Trigger: TAATTTTGATGACATCAAGCACACGACTCTTGGTGA...AATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CCA 90 bp | TTAATTTTTCACAGCACACAACGGACAGAGCACATCCAATTAACTGGTCTGCAGGTCCTTTTTGGGTTCTaGCAAGCCTATTCCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LIFHSTQRTEHIQLTGLQVLFGF*QAYSNK Trigger: TTTATTGGAATAGGCTTGCCAGAACCCAAAAAGGAC...CTGCAGACCAGTTAATTGGATGTGCTCTGTCCGTTGTGTGCTGTGAAAAATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CCA 90 bp | CCAATTAACTGGTCTGCAGTTACTCACCAGCTACCTCAGAGAAGAGTTATTCCAACTTGTGTCAAGCCTTaGAAAATATGGTCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PINWSAVTHQLPQRRVIPTCVKP*KIWSFL Trigger: CAAAAAGGACCATATTTTCCAAGGCTTGACACAAGT...TGGAATAACTCTTCTCTGAGGTAGCTGGTGAGTAACTGCAGACCAGTTAATTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | TCAAAGAGTGAGTACGGCATAGGGCAATTTAGAAATTGTCACGCTAATTGCCATTCAGTAGCAAACTGCTaGAGCCCACCAATATTAATT | + |
|
Preference number: 4 (lower is better) Translates to: SKSEYGIGQFRNCHANCHSVANC*SPPILI Trigger: AATTAATATTGGTGGGCTGCAGCAGTTTGCTACTGA...ATGGCAATTAGCGTGACAATTTCTAAATTGCCCTATGCCGTACTCACTCTTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTTCGAACAAATTGCATTaGCACAATCTTTCCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCSVKVGHSPDIHLDILFSNKLH*HNLSIF Trigger: AAAGATGGAAAGATTGTGGCAATGCAATTTGTTCGA...AAATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CCA 90 bp | ACCAGCTACCTCAGAGAAGAGTTATTCCATTTTATGACCATTAATTTGTCACTGGACTATAACCTTCCGTaGCGAGAGGAAAGGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSYLREELFHFMTINLSLDYNLP*REERQK Trigger: TTTTTGCCTTTCCTCTCGCCACGGAAGGTTATAGTC...CAGTGACAAATTAATGGTCATAAAATGGAATAACTCTTCTCTGAGGTAGCTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR TCA 90 bp | CAGACATTCACCTCGATATCTTATTTCATTAGGAACACCGCTTTGGTATTCAAAAACATTTGCCGCAATTaGTGCACATTTCCTCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: QTFTSISYFIRNTALVFKNICRN*CTFPHR Trigger: TCGATGAGGAAATGTGCATCAATTGCGGCAAATGTT...TTTGAATACCAAAGCGGTGTTCCTAATGAAATAAGATATCGAGGTGAATGTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | TTAATTTTTCACAGCACACAACGGACAGAGCACATCCAATTAACTGGTCTGCAGAAAAATCAGCTTAGCTaGACCATAGTAGTTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LIFHSTQRTEHIQLTGLQKNQLS*TIVVLV Trigger: AACAAGAACTACTATGGTGCAGCTAAGCTGATTTTT...CTGCAGACCAGTTAATTGGATGTGCTCTGTCCGTTGTGTGCTGTGAAAAATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | CAGACATTCACCTCGATATCTTATTTCATTAGGAACACCGCTTTGGTATTCAAATTTTGCGAGTTAAAGTaGTTTCTCTGGAGAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTFTSISYFIRNTALVFKFCELK*FLWRGE Trigger: CTCACCTCTCCAGAGAAAGCACTTTAACTCGCAAAA...TTTGAATACCAAAGCGGTGTTCCTAATGAAATAAGATATCGAGGTGAATGTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | CAGACATTCACCTCGATATCTTATTTCATTAGGAACACCGCTTTGGTATTCAAACATGGTTCACTGGTTTaGATGGTTTCTGGATTTACT | + |
|
Preference number: 4 (lower is better) Translates to: QTFTSISYFIRNTALVFKHGSLV*MVSGFT Trigger: AGTAAATCCAGAAACCATGCAAACCAGTGAACCATG...TTTGAATACCAAAGCGGTGTTCCTAATGAAATAAGATATCGAGGTGAATGTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | TCAAAGAGTGAGTACGGCATAGGGCAATTTAGAAATTGTCACGCTAATTGCCATAATGTTCCCAGGTATTaGAGTGATTTTCCAATTACA | + |
|
Preference number: 4 (lower is better) Translates to: SKSEYGIGQFRNCHANCHNVPRY*SDFPIT Trigger: TGTAATTGGAAAATCACTGCAATACCTGGGAACATT...ATGGCAATTAGCGTGACAATTTCTAAATTGCCCTATGCCGTACTCACTCTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR GCA 90 bp | AACTCATTTGTTCCCCCAATAATGAAGAATGACTTTTTCTTTACCACATCTGTGTCACCAAGAGTCGTGTaGTTGATGTCATCAAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: NSFVPPIMKNDFFFTTSVSPRVV*LMSSKL Trigger: TAATTTTGATGACATCAAGCACACGACTCTTGGTGA...CACAGATGTGGTAAAGAAAAAGTCATTCTTCATTATTGGGGGAACAAATGAGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000149101.3 |
||
| CDS GCA 90 bp | GAAGACGATGAACACGCGAAGGGCTCCACAGCGCAGAGCGGATGTTaGACAGTCAAACGCAGTATCTCCAGCTCCGAGTACAATCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: EDDEHAKGSTAQSGC*TVKRSISSSEYNHG Trigger: GCCGTGATTGTACTCGGAGCTGGAGATACTGCGTTTGACTGTGCAACATCCGCTCTGCGCTGTGGAGCCCTTCGCGTGTTCATCGTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS GCA 90 bp | GCTCTGGATCCTGCCCACAAGCCAGGCCCATTCCTCTCTCCCCCATaGCATGTGGACACGATAAATTTAACTCCAGGGCATCTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALDPAHKPGPFLSPP*HVDTINLTPGHLLQ Trigger: CTGGAGCAGATGCCCTGGAGTTAAATTTATCGTGTCCACATGGCATGGGGGAGAGAGGAATGGGCCTGGCTTGTGGGCAGGATCCAGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 90 bp | CCAGCCAGCTTCAAAGGCCCTTCGAATCATTGGTGTGCTAGTGGCTaGTGTCGCACTGGCAAGGCCAAAGGGATTGGGAAACCTCAACCC | + |
|
Preference number: 5 (lower is better) Translates to: PASFKGPSNHWCASG*CRTGKAKGIGKPQP Trigger: GGGTTGAGGTTTCCCAATCCCTTTGGCCTTGCCAGTGCGACACCAGCCACTAGCACACCAATGATTCGAAGGGCCTTTGAAGCTGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 90 bp | GGTCAGAGCAAAACCCCAGCCAGCTTCAAAGGCCCTTCGAATCATTaGTGTGCTAGTGGCTGGTGTCGCACTGGCAAGGCCAAAGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: GQSKTPASFKGPSNH*CASGWCRTGKAKGI Trigger: AATCCCTTTGGCCTTGCCAGTGCGACACCAGCCACTAGCACACCAATGATTCGAAGGGCCTTTGAAGCTGGCTGGGGTTTTGCTCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 90 bp | GTGTGCCATCAGCTTTCAGTCCCATCAGACCCGAGACGGTGTTGGTaGCTGTTACACCATCTGCTCCACCTTCCTTTGCTGCTCTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: VCHQLSVPSDPRRCW*LLHHLLHLPLLLLR Trigger: TCGCAAGAGCAGCAAAGGAAGGTGGAGCAGATGGTGTAACAGCCACCAACACCGTCTCGGGTCTGATGGGACTGAAAGCTGATGGCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 90 bp | AGGGTGTGCCATCAGCTTTCAGTCCCATCAGACCCGAGACGGTGTTaGTGGCTGTTACACCATCTGCTCCACCTTCCTTTGCTGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVCHQLSVPSDPRRC*WLLHHLLHLPLLLL Trigger: CAAGAGCAGCAAAGGAAGGTGGAGCAGATGGTGTAACAGCCACCAACACCGTCTCGGGTCTGATGGGACTGAAAGCTGATGGCACACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | GGCCAGGACTCCATCCCTGGTCAGTCTGACACCTGTTTCAGGTGGTCAACAGCAAGCGCAGAGCGGATGTaGCACAGTCAAACGCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GQDSIPGQSDTCFRWSTASAERM*HSQTQY Trigger: ATACTGCGTTTGACTGTGCAACATCCGCTCTGCGCT...TGCTGTTGACCACCTGAAACAGGTGTCAGACTGACCAGGGATGGAGTCCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS TCA 90 bp | ACAGCTTATACTCGCAGGCCCTGCACCAAAAAGTGCAATTTTTGCTaGGTAGGCTTCCGGCATATGTTCCGGAGGAGGCAGCGATGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TAYTRRPCTKKCNFC*VGFRHMFRRRQRWV Trigger: AACCCATCGCTGCCTCCTCCGGAACATATGCCGGAAGCCTACTCAGCAAAAATTGCACTTTTTGGTGCAGGGCCTGCGAGTATAAGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 90 bp | CAAACGCAGTATCTCCAGCTCCGAGTACAATCACGGCTCCCCTTATaGATGGCAATGGAGAGTGACAGGCGCACATTCCTGTTTTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: QTQYLQLRVQSRLPL*MAMESDRRTFLFYC Trigger: GCAGTAAAACAGGAATGTGCGCCTGTCACTCTCCATTGCCATCCATAAGGGGAGCCGTGATTGTACTCGGAGCTGGAGATACTGCGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS TCA 90 bp | AGCTTTGTCCAGGGCCATACAAGGGGCCAGAAGTTGTCCCCCGGATaGTTCTTGGTGAGACGTTTGTCACGATGTCCTTATCAAGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFVQGHTRGQKLSPG*FLVRRLSRCPYQER Trigger: TCTCTCTTGATAAGGACATCGTGACAAACGTCTCACCAAGAATCATCCGGGGGACAACTTCTGGCCCCTTGTATGGCCCTGGACAAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 90 bp | TTCCGGCATATGTTCCGGAGGAGGCAGCGATGGGTTTCTGATCTGTaGGATGTTCATTGCTTTGAACACCTCAGTAGCAAACTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FRHMFRRRQRWVSDL*DVHCFEHLSSKLLQ Trigger: CTGCAGCAGTTTGCTACTGAGGTGTTCAAAGCAATGAACATCCCACAGATCAGAAACCCATCGCTGCCTCCTCCGGAACATATGCCGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 90 bp | AGGTCCAAAGCTGGGCAGTTTCTGTCCCATGAGCTCAGCAACGCGTaGAACTGGTTTCCCTTTCTGATGACTTATAATGGGTGGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSKAGQFLSHELSNA*NWFPFLMTYNGWTL Trigger: CAGAGTCCACCCATTATAAGTCATCAGAAAGGGAAACCAGTTCCACGCGTTGCTGAGCTCATGGGACAGAAACTGCCCAGCTTTGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 90 bp | AAAGCTGGGCAGTTTCTGTCCCATGAGCTCAGCAACGCGTGGAACTaGTTTCCCTTTCTGATGACTTATAATGGGTGGACTCTGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: KAGQFLSHELSNAWN*FPFLMTYNGWTLTI Trigger: GATGGTCAGAGTCCACCCATTATAAGTCATCAGAAAGGGAAACCAGTTCCACGCGTTGCTGAGCTCATGGGACAGAAACTGCCCAGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS TCA 90 bp | TGTTTCTTGTCTAGTTTCTTGGCTGCGGTGGAACGCAGAGTTGCATaGGCTTGTACTCGAGGGTTTAAAGCCAGGATACTCTCGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFLSSFLAAVERRVA*ACTRGFKARILSMS Trigger: GGACATCGAGAGTATCCTGGCTTTAAACCCTCGAGTACAAGCTCATGCAACTCTGCGTTCCACCGCAGCCAAGAAACTAGACAAGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039177.12 ENSMUST00000149101.3 |
||
| CDS GCA 90 bp | GATCCAAAGGCACTAATAACCACATCAGCCTTTAGCCGCACCGTCTaGTCTTCATCTTCCACCCAGTTTCCGGTTTCATCTTGCTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DPKALITTSAFSRTV*SSSSTQFPVSSCSV Trigger: AACTGAGCAAGATGAAACCGGAAACTGGGTGGAAGATGAAGAGCAGACGGTGCGGCTAAAGGCTGATGTGGTTATTAGTGCCTTTGGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 90 bp | AGTTCTTGTCCGTGTTCCTTTTCCAGTGTTTCTTGTCTAGTTTCTTaGCTGCGGTGGAACGCAGAGTTGCATGAGCTTGTACTCGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSCPCSFSSVSCLVS*LRWNAELHELVLEG Trigger: ACCCTCGAGTACAAGCTCATGCAACTCTGCGTTCCACCGCAGCCAAGAAACTAGACAAGAAACACTGGAAAAGGAACACGGACAAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039177.12 ENSMUST00000149101.3 |
||
| CDS CCA 90 bp | CTTGTGATAAATGATTTAATGTCAAGAGATGTGGGACAGCTCTTCTaGCAGGGAGCATCTGCGCACTTCAGGCATCTCACTGCTTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LVINDLMSRDVGQLF*QGASAHFRHLTASR Trigger: CCGAGAAGCAGTGAGATGCCTGAAGTGCGCAGATGCTCCCTGCCAGAAGAGCTGTCCCACATCTCTTGACATTAAATCATTTATCACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS GCA 90 bp | GTTGGTGGCTGTTACACCATCTGCTCCACCTTCCTTTGCTGCTCTTaGGATGCTTACAATATCAGTGACATTTGGGGTCAACTTGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VGGCYTICSTFLCCS*DAYNISDIWGQLGK Trigger: TTTGCCAAGTTGACCCCAAATGTCACTGATATTGTAAGCATCGCAAGAGCAGCAAAGGAAGGTGGAGCAGATGGTGTAACAGCCACCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | TTAATTTTTCACAGCACACAACGGACAGAGCACATCCAATTAACTGGTCTGCAGTGGAACCCGAACAGCTaGCCTAACCCAGCGACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LIFHSTQRTEHIQLTGLQWNPNS*PNPATD Trigger: ATCTGTCGCTGGGTTAGGCAAGCTGTTCGGGTTCCA...CTGCAGACCAGTTAATTGGATGTGCTCTGTCCGTTGTGTGCTGTGAAAAATTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS TCA 90 bp | CCATTTTGGAGAGTTCCATCCAGTCACTCTTGTTGTAACTGCACATaGTGCTGGCGATCAGGATATTGTCCGGGAAGTCAGCCTTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PFWRVPSSHSCCNCT*CWRSGYCPGSQPLV Trigger: AACTAAAGGCTGACTTCCCGGACAATATCCTGATCGCCAGCATCATGTGCAGTTACAACAAGAGTGACTGGATGGAACTCTCCAAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 90 bp | ATCACCACCTGCAAACACCCATGGTTCACTGGTTTGCATGGTTTCTaGATTTACTTCTGGGAGACCCCATCTGTTAAACTTGATGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: ITTCKHPWFTGLHGF*IYFWETPSVKLDGT Trigger: AGTCCCATCAAGTTTAACAGATGGGGTCTCCCAGAAGTAAATCCAGAAACCATGCAAACCAGTGAACCATGGGTGTTTGCAGGTGGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | TCTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTGAAGCCTCAGCCATTTaGGAGAGTTCCATCCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVLSESGPFTRHSPRYLIEASAI*ESSIQS Trigger: TGACTGGATGGAACTCTCCAAAATGGCTGAGGCTTC...AATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | TCTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTATGGTAGGCCTCTCTTaGGTTGATAAGGTGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SVLSESGPFTRHSPRYLIMVGLS*VDKVLP Trigger: GGGCAACACCTTATCAACCAAAGAGAGGCCTACCAT...AATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS GCA 90 bp | CACCCAGTTTCCGGTTTCATCTTGCTCAGTTCGAACAAATTGCATTaGCACAATCTTTCCATCTTTGACTATAACCTTCCGTGGCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HPVSGFILLSSNKLH*HNLSIFDYNLPWRE Trigger: CTCTCGCCACGGAAGGTTATAGTCAAAGATGGAAAGATTGTGGCAATGCAATTTGTTCGAACTGAGCAAGATGAAACCGGAAACTGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS GCA 90 bp | ATTTACTTCTGGGAGACCCCATCTGTTAAACTTGATGGGACTCAATaGTTCTTTCACTTTGGGATCCTCCAGGACAGATCCAAAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: IYFWETPSVKLDGTQ*FFHFGILQDRSKGT Trigger: AGTGCCTTTGGATCTGTCCTGGAGGATCCCAAAGTGAAAGAAGCATTGAGTCCCATCAAGTTTAACAGATGGGGTCTCCCAGAAGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS TCA 90 bp | CTTAGCTGCACCATAGTAGTTCTTGTTGGCGATACTTGTGATAAATaGTTTAATGTCAAGAGATGTGGGACAGCTCTTCTGGCAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSCTIVVLVGDTCDK*FNVKRCGTALLAGS Trigger: GCTCCCTGCCAGAAGAGCTGTCCCACATCTCTTGACATTAAATCATTTATCACAAGTATCGCCAACAAGAACTACTATGGTGCAGCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS TCA 90 bp | ATCAGGATATTGTCCGGGAAGTCAGCCTTTAGTTCGGTGACACTGTaGCACCAATATGCAGCTGTTTTCTCACTGATGAGCTCAATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: IRILSGKSAFSSVTL*HQYAAVFSLMSSML Trigger: TAACATTGAGCTCATCAGTGAGAAAACAGCTGCATATTGGTGTCACAGTGTCACCGAACTAAAGGCTGACTTCCCGGACAATATCCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS GCA 90 bp | TCTTCCACCCAGTTTCCGGTTTCATCTTGCTCAGTTCGAACAAATTaGATTGCCACAATCTTTCCATCTTTGACTATAACCTTCCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSTQFPVSSCSVRTN*IATIFPSLTITFRG Trigger: GCCACGGAAGGTTATAGTCAAAGATGGAAAGATTGTGGCAATGCAATTTGTTCGAACTGAGCAAGATGAAACCGGAAACTGGGTGGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | CTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTCTTTTCCAGTGTTTCTaGTCTAGTTTCTTGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LCSVKVGHSPDIHLDILFLFQCF*SSFLAA Trigger: CGCAGCCAAGAAACTAGACAAGAAACACTGGAAAAG...AAATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | TCTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTAATGCTTCTTTCACTTaGGGATCCTCCAGGACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SVLSESGPFTRHSPRYLINASFT*GSSRTD Trigger: ATCTGTCCTGGAGGATCCCAAAGTGAAAGAAGCATT...AATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | CTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTCCATGGTTCACTGGTTaGCATGGTTTCTGGATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LCSVKVGHSPDIHLDILFPWFTG*HGFWIY Trigger: GTAAATCCAGAAACCATGCAAACCAGTGAACCATGG...AAATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | TCTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTCAAGAGAGAAAGTTTaGGTCAGAGCAAAACCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVLSESGPFTRHSPRYLISREKV*VRAKPQ Trigger: CTGGGGTTTTGCTCTGACCAAAACTTTCTCTCTTGA...AATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS GCA 90 bp | TGCAGTGATTTTCCAATTACATCCTTGATGGCAGGAATAGGCTTTTaGGAGTTAAAGTGCTTTCTCTGGAGAGGTGAGCAAGCTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSDFPITSLMAGIGF*ELKCFLWRGEQAVF Trigger: AAACACAGCTTGCTCACCTCTCCAGAGAAAGCACTTTAACTCGCAAAAGCCTATTCCTGCCATCAAGGATGTAATTGGAAAATCACTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | CTGTGCTCAGTGAAAGTGGGCCATTCACCAGACATTCACCTCGATATCTTATTTCCAAGAGTCGTGTGCTaGATGTCATCAAAATTACTC | + |
|
Preference number: 5 (lower is better) Translates to: LCSVKVGHSPDIHLDILFPRVVC*MSSKLL Trigger: GAGTAATTTTGATGACATCAAGCACACGACTCTTGG...AAATAAGATATCGAGGTGAATGTCTGGTGAATGGCCCACTTTCACTGAGCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | ACCAGCTACCTCAGAGAAGAGTTATTCCATTTTATGACCATTAATTTGTCACTGCTGCTCCACCTTCCTTaGCTGCTCTTGCGATGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TSYLREELFHFMTINLSLLLHLP*LLLRCL Trigger: TAAGCATCGCAAGAGCAGCAAAGGAAGGTGGAGCAG...CAGTGACAAATTAATGGTCATAAAATGGAATAACTCTTCTCTGAGGTAGCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS TCA 90 bp | TTGTTCCATGATGCTCATCTCACCAAATGTTCCCAGGTATTGCAGTaGTTTTCCAATTACATCCTTGATGGCAGGAATAGGCTTTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LFHDAHLTKCSQVLQ*FSNYILDGRNRLLR Trigger: TCGCAAAAGCCTATTCCTGCCATCAAGGATGTAATTGGAAAATCACTGCAATACCTGGGAACATTTGGTGAGATGAGCATCATGGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | TCAAAGAGTGAGTACGGCATAGGGCAATTTAGAAATTGTCACGCTAATTGCCATGGGATGTTCATTGCTTaGAACACCTCAGTAGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SKSEYGIGQFRNCHANCHGMFIA*NTSVAN Trigger: GTTTGCTACTGAGGTGTTCAAAGCAATGAACATCCC...ATGGCAATTAGCGTGACAATTTCTAAATTGCCCTATGCCGTACTCACTCTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | AAAGCGTTTCCTTGGAAACGGTTTCCTGTATATGAAAGTGCACTCCGTTCCAAAACAATCTTTCCATCTTaGACTATAACCTTCCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KAFPWKRFPVYESALRSKTIFPS*TITFRG Trigger: GCCACGGAAGGTTATAGTCAAAGATGGAAAGATTGT...TTTGGAACGGAGTGCACTTTCATATACAGGAAACCGTTTCCAAGGAAACGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | ACCAGCTACCTCAGAGAAGAGTTATTCCATTTTATGACCATTAATTTGTCACTGGCTTGCTTTCCATCGTaGACAGATTCCACTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TSYLREELFHFMTINLSLACFPS*TDSTVV Trigger: CACCACAGTGGAATCTGTCAACGATGGAAAGCAAGC...CAGTGACAAATTAATGGTCATAAAATGGAATAACTCTTCTCTGAGGTAGCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | CAGACATTCACCTCGATATCTTATTTCATTAGGAACACCGCTTTGGTATTCAAAGATCAGGGCCACAACTaGTTCCATGATGCTCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTFTSISYFIRNTALVFKDQGHN*FHDAHL Trigger: GAGATGAGCATCATGGAACAAGTTGTGGCCCTGATC...TTTGAATACCAAAGCGGTGTTCCTAATGAAATAAGATATCGAGGTGAATGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS GCA 90 bp | ACAACTTGTTCCATGATGCTCATCTCACCAAATGTTCCCAGGTATTaGAGTGATTTTCCAATTACATCCTTGATGGCAGGAATAGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TTCSMMLISPNVPRY*SDFPITSLMAGIGF Trigger: AAAGCCTATTCCTGCCATCAAGGATGTAATTGGAAAATCACTGCAATACCTGGGAACATTTGGTGAGATGAGCATCATGGAACAAGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 90 bp | AAATTGCATTGCCACAATCTTTCCATCTTTGACTATAACCTTCCGTaGCGAGAGGAAAGGCAAAAATTCACATTTCTCTTCCTTAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: KLHCHNLSIFDYNLP*REERQKFTFLFLSE Trigger: CTCGCTAAGGAAGAGAAATGTGAATTTTTGCCTTTCCTCTCGCCACGGAAGGTTATAGTCAAAGATGGAAAGATTGTGGCAATGCAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | CCAATAATGAAGAATGACTTTTTCTTTACCACATCTGTGACTGTTGCTATGGTGCTTTTCCAGTGTTTCTaGTCTAGTTTCTTGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PIMKNDFFFTTSVTVAMVLFQCF*SSFLAA Trigger: CGCAGCCAAGAAACTAGACAAGAAACACTGGAAAAG...CACCATAGCAACAGTCACAGATGTGGTAAAGAAAAAGTCATTCTTCATTATTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149101.3 |
||
| CDS-3UTR CAA 90 bp | AAAGCGTTTCCTTGGAAACGGTTTCCTGTATATGAAAGTGCACTCCGTTCCAAATCTTTCTGTCTGATTTaGCTTGCTGCTATGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KAFPWKRFPVYESALRSKSFCLI*LAAMIF Trigger: GAAAATCATAGCAGCAAGCAAAATCAGACAGAAAGA...TTTGGAACGGAGTGCACTTTCATATACAGGAAACCGTTTCCAAGGAAACGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS-3UTR CAA 90 bp | AACTCATTTGTTCCCCCAATAATGAAGAATGACTTTTTCTTTACCACATCTGTGCCAAGAGTCGTGTGCTaGATGTCATCAAAATTACTC | + |
|
Preference number: 5 (lower is better) Translates to: NSFVPPIMKNDFFFTTSVPRVVC*MSSKLL Trigger: GAGTAATTTTGATGACATCAAGCACACGACTCTTGG...CACAGATGTGGTAAAGAAAAAGTCATTCTTCATTATTGGGGGAACAAATGAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000149101.3 |
||
| CDS GCA 72 bp | GAACACGCGAAGGGCTCCACAGCGCAGAGCGGATGTTaGACAGTCAAACGCAGTATCTCCAGCTCCGAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: EHAKGSTAQSGC*TVKRSISSSEY Trigger: GTACTCGGAGCTGGAGATACTGCGTTTGACTGTGCAACATCCGCTCTGCGCTGTGGAGCCCTTCGCGTGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 72 bp | AAAACCCCAGCCAGCTTCAAAGGCCCTTCGAATCATTaGTGTGCTAGTGGCTGGTGTCGCACTGGCAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KTPASFKGPSNH*CASGWCRTGKA Trigger: GGCCTTGCCAGTGCGACACCAGCCACTAGCACACCAATGATTCGAAGGGCCTTTGAAGCTGGCTGGGGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CAA 90 bp | CAGGGTGTGCCATCAGCTTTCAGTCCCATCAGACCCGAGACGGTGTaGGTGGCTGTTACACCATCTGCTCCACCTTCCTTTGCTGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QGVPSAFSPIRPETV*VAVTPSAPPSFAAL Trigger: AAGAGCAGCAAAGGAAGGTGGAGCAGATGGTGTAACAGCCACCAACACCGTCTCGGGTCTGATGGGACTGAAAGCTGATGGCACACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS GCA 72 bp | CCTGCCCACAAGCCAGGCCCATTCCTCTCTCCCCCATaGCATGTGGACACGATAAATTTAACTCCAGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PAHKPGPFLSPP*HVDTINLTPGH Trigger: ATGCCCTGGAGTTAAATTTATCGTGTCCACATGGCATGGGGGAGAGAGGAATGGGCCTGGCTTGTGGGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 72 bp | CAGCTTTCAGTCCCATCAGACCCGAGACGGTGTTGGTaGCTGTTACACCATCTGCTCCACCTTCCTTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QLSVPSDPRRCW*LLHHLLHLPLL Trigger: CAGCAAAGGAAGGTGGAGCAGATGGTGTAACAGCCACCAACACCGTCTCGGGTCTGATGGGACTGAAAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS TCA 72 bp | ACTCGCAGGCCCTGCACCAAAAAGTGCAATTTTTGCTaGGTAGGCTTCCGGCATATGTTCCGGAGGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TRRPCTKKCNFC*VGFRHMFRRRQ Trigger: CTGCCTCCTCCGGAACATATGCCGGAAGCCTACTCAGCAAAAATTGCACTTTTTGGTGCAGGGCCTGCGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 72 bp | TATCTCCAGCTCCGAGTACAATCACGGCTCCCCTTATaGATGGCAATGGAGAGTGACAGGCGCACATTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: YLQLRVQSRLPL*MAMESDRRTFL Trigger: CAGGAATGTGCGCCTGTCACTCTCCATTGCCATCCATAAGGGGAGCCGTGATTGTACTCGGAGCTGGAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CCA 72 bp | CATCAGCTTTCAGTCCCATCAGACCCGAGACGGTGTTaGTGGCTGTTACACCATCTGCTCCACCTTCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: HQLSVPSDPRRC*WLLHHLLHLPL Trigger: CAAAGGAAGGTGGAGCAGATGGTGTAACAGCCACCAACACCGTCTCGGGTCTGATGGGACTGAAAGCTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CAA 72 bp | CCATCAGCTTTCAGTCCCATCAGACCCGAGACGGTGTaGGTGGCTGTTACACCATCTGCTCCACCTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PSAFSPIRPETV*VAVTPSAPPSF Trigger: AAAGGAAGGTGGAGCAGATGGTGTAACAGCCACCAACACCGTCTCGGGTCTGATGGGACTGAAAGCTGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS CAA 90 bp | AGGCACAGCTTATACTCGCAGGCCCTGCACCAAAAAGTGCAATTTTaGCTGAGTAGGCTTCCGGCATATGTTCCGGAGGAGGCAGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: RHSLYSQALHQKVQF*LSRLPAYVPEEAAM Trigger: CATCGCTGCCTCCTCCGGAACATATGCCGGAAGCCTACTCAGCAAAAATTGCACTTTTTGGTGCAGGGCCTGCGAGTATAAGCTGTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
||
| CDS TCA 72 bp | CTCGGAGAGCTCCTCGCTCACCAAGAGTCGTGTGCTTaGTGTCATCAAAATTACTCTCCAGCTTCTCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGELLAHQESCA*CHQNYSPASHR Trigger: CCTGTGAGAAGCTGGAGAGTAATTTTGATGACATCAAGCACACGACTCTTGGTGAGCGAGGAGCTCTCCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039177.12 ENSMUST00000149101.3 |
||
| CDS GCA 72 bp | AGGCAGCGATGGGTTTCTGATCTGTGGGATGTTCATTaGTTTGAACACCTCAGTAGCAAACTGCTGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RQRWVSDLWDVH*FEHLSSKLLQP Trigger: GGGCTGCAGCAGTTTGCTACTGAGGTGTTCAAAGCAATGAACATCCCACAGATCAGAAACCCATCGCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CCA 72 bp | GTAGGCTTCCGGCATATGTTCCGGAGGAGGCAGCGATaGGTTTCTGATCTGTGGGATGTTCATTGCTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: VGFRHMFRRRQR*VSDLWDVHCFE Trigger: TTCAAAGCAATGAACATCCCACAGATCAGAAACCCATCGCTGCCTCCTCCGGAACATATGCCGGAAGCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CCA 72 bp | TCCGAGTACAATCACGGCTCCCCTTATGGATGGCAATaGAGAGTGACAGGCGCACATTCCTGTTTTACTGCT | + |
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Preference number: 6 (lower is better) Translates to: SEYNHGSPYGWQ*RVTGAHSCFTA Trigger: AGCAGTAAAACAGGAATGTGCGCCTGTCACTCTCCATTGCCATCCATAAGGGGAGCCGTGATTGTACTCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS TCA 72 bp | TCTAGTTTCTTGGCTGCGGTGGAACGCAGAGTTGCATaGGCTTGTACTCGAGGGTTTAAAGCCAGGATACTC | + |
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Preference number: 6 (lower is better) Translates to: SSFLAAVERRVA*ACTRGFKARIL Trigger: GAGTATCCTGGCTTTAAACCCTCGAGTACAAGCTCATGCAACTCTGCGTTCCACCGCAGCCAAGAAACTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039177.12 ENSMUST00000149101.3 |
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| CDS TCA 72 bp | AGGGATTGGGAAACCTCAACCCTGCCATTTCCACGCTaGTGTCCACTAAGTCAACCGGAGTGTAAAATAGGG | + |
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Preference number: 6 (lower is better) Translates to: RDWETSTLPFPR*CPLSQPECKIG Trigger: CCCTATTTTACACTCCGGTTGACTTAGTGGACATCAGCGTGGAAATGGCAGGGTTGAGGTTTCCCAATCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS GCA 72 bp | GCTTCTCGGAGAGCTCCTCGCTCACCAAGAGTCGTGTaGTTGATGTCATCAAAATTACTCTCCAGCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: ASRRAPRSPRVV*LMSSKLLSSFS Trigger: TGAGAAGCTGGAGAGTAATTTTGATGACATCAAGCACACGACTCTTGGTGAGCGAGGAGCTCTCCGAGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039177.12 ENSMUST00000149101.3 |
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| CDS GCA 72 bp | GCACTAATAACCACATCAGCCTTTAGCCGCACCGTCTaGTCTTCATCTTCCACCCAGTTTCCGGTTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: ALITTSAFSRTV*SSSSTQFPVSS Trigger: AGATGAAACCGGAAACTGGGTGGAAGATGAAGAGCAGACGGTGCGGCTAAAGGCTGATGTGGTTATTAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS GCA 72 bp | CACTGTGGTGTTAGCCATACCCACAACATCACCACCTaGAAACACCCATGGTTCACTGGTTTGCATGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: HCGVSHTHNITT*KHPWFTGLHGF Trigger: GAAACCATGCAAACCAGTGAACCATGGGTGTTTGCAGGTGGTGATGTTGTGGGTATGGCTAACACCACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CAA 72 bp | TCTTGTCTAGTTTCTTGGCTGCGGTGGAACGCAGAGTaGCATGAGCTTGTACTCGAGGGTTTAAAGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SCLVSWLRWNAE*HELVLEGLKPG Trigger: TCCTGGCTTTAAACCCTCGAGTACAAGCTCATGCAACTCTGCGTTCCACCGCAGCCAAGAAACTAGACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039177.12 ENSMUST00000149101.3 |
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| CDS CAA 72 bp | TCTCGGAGAGCTCCTCGCTCACCAAGAGTCGTGTGCTaGATGTCATCAAAATTACTCTCCAGCTTCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: SRRAPRSPRVVC*MSSKLLSSFSQ Trigger: CTGTGAGAAGCTGGAGAGTAATTTTGATGACATCAAGCACACGACTCTTGGTGAGCGAGGAGCTCTCCGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039177.12 ENSMUST00000149101.3 |
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| CDS CAA 72 bp | TTATACTCGCAGGCCCTGCACCAAAAAGTGCAATTTTaGCTGAGTAGGCTTCCGGCATATGTTCCGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LYSQALHQKVQF*LSRLPAYVPEE Trigger: CTCCTCCGGAACATATGCCGGAAGCCTACTCAGCAAAAATTGCACTTTTTGGTGCAGGGCCTGCGAGTATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS TCA 72 bp | AGAGTTCCATCCAGTCACTCTTGTTGTAACTGCACATaGTGCTGGCGATCAGGATATTGTCCGGGAAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: RVPSSHSCCNCT*CWRSGYCPGSQ Trigger: CTGACTTCCCGGACAATATCCTGATCGCCAGCATCATGTGCAGTTACAACAAGAGTGACTGGATGGAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS GCA 72 bp | GGTGGCTGTTACACCATCTGCTCCACCTTCCTTTGCTaGTCTTGCGATGCTTACAATATCAGTGACATTTGG | + |
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Preference number: 6 (lower is better) Translates to: GGCYTICSTFLC*SCDAYNISDIW Trigger: CCAAATGTCACTGATATTGTAAGCATCGCAAGAGCAGCAAAGGAAGGTGGAGCAGATGGTGTAACAGCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CCA 72 bp | AATGATTTAATGTCAAGAGATGTGGGACAGCTCTTCTaGCAGGGAGCATCTGCGCACTTCAGGCATCTCACT | + |
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Preference number: 6 (lower is better) Translates to: NDLMSRDVGQLF*QGASAHFRHLT Trigger: AGTGAGATGCCTGAAGTGCGCAGATGCTCCCTGCCAGAAGAGCTGTCCCACATCTCTTGACATTAAATCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CCA 72 bp | ATGTTCCGGAGGAGGCAGCGATGGGTTTCTGATCTGTaGGATGTTCATTGCTTTGAACACCTCAGTAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: MFRRRQRWVSDL*DVHCFEHLSSK Trigger: TTTGCTACTGAGGTGTTCAAAGCAATGAACATCCCACAGATCAGAAACCCATCGCTGCCTCCTCCGGAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CCA 72 bp | CAGTTTCTGTCCCATGAGCTCAGCAACGCGTGGAACTaGTTTCCCTTTCTGATGACTTATAATGGGTGGACT | + |
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Preference number: 6 (lower is better) Translates to: QFLSHELSNAWN*FPFLMTYNGWT Trigger: AGTCCACCCATTATAAGTCATCAGAAAGGGAAACCAGTTCCACGCGTTGCTGAGCTCATGGGACAGAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CAA 72 bp | TTTCTCACTGATGAGCTCAATGTTAAGAAAGGAGCTTaGTCCAGGGCCATACAAGGGGCCAGAAGTTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: FLTDELNVKKGA*SRAIQGARSCP Trigger: GGGACAACTTCTGGCCCCTTGTATGGCCCTGGACAAAGCTCCTTTCTTAACATTGAGCTCATCAGTGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS TCA 72 bp | TCAGGATATTGTCCGGGAAGTCAGCCTTTAGTTCGGTaGCACTGTGACACCAATATGCAGCTGTTTTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: SGYCPGSQPLVR*HCDTNMQLFSH Trigger: GTGAGAAAACAGCTGCATATTGGTGTCACAGTGTCACCGAACTAAAGGCTGACTTCCCGGACAATATCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS GCA 72 bp | GTTGGTGGCTGTTACACCATCTGCTCCACCTTCCTTTaGTGCTCTTGCGATGCTTACAATATCAGTGACATT | + |
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Preference number: 6 (lower is better) Translates to: VGGCYTICSTFL*CSCDAYNISDI Trigger: AATGTCACTGATATTGTAAGCATCGCAAGAGCAGCAAAGGAAGGTGGAGCAGATGGTGTAACAGCCACCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS TCA 72 bp | GGCACTGAGGTTCCATATTGTGCCTGTATGTGCTTGTaGATGTACCATGAAGCTTGCTTTCCATCGTTGACA | + |
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Preference number: 6 (lower is better) Translates to: GTEVPYCACMCL*MYHEACFPSLT Trigger: TGTCAACGATGGAAAGCAAGCTTCATGGTACATTCACAAGCACATACAGGCACAATATGGAACCTCAGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS GCA 72 bp | GGGATGTTCATTGCTTTGAACACCTCAGTAGCAAACTaGTGCAGCCCACCAATATTAATTGGTCCCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GMFIALNTSVAN*CSPPILIGPSS Trigger: TGAAGAGGGACCAATTAATATTGGTGGGCTGCAGCAGTTTGCTACTGAGGTGTTCAAAGCAATGAACATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS GCA 72 bp | TGTTACACCATCTGCTCCACCTTCCTTTGCTGCTCTTaGGATGCTTACAATATCAGTGACATTTGGGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: CYTICSTFLCCS*DAYNISDIWGQ Trigger: TTGACCCCAAATGTCACTGATATTGTAAGCATCGCAAGAGCAGCAAAGGAAGGTGGAGCAGATGGTGTAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS TCA 72 bp | CAGAGTCATTACAGGTCATGTAACATTTGCCGCAATTaGTGCACATTTCCTCATCGATCAGGGCCACAACTT | + |
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Preference number: 6 (lower is better) Translates to: QSHYRSCNICRN*CTFPHRSGPQL Trigger: AAGTTGTGGCCCTGATCGATGAGGAAATGTGCATCAATTGCGGCAAATGTTACATGACCTGTAATGACTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS GCA 72 bp | ATGTTCATTGCTTTGAACACCTCAGTAGCAAACTGCTaGAGCCCACCAATATTAATTGGTCCCTCTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: MFIALNTSVANC*SPPILIGPSSA Trigger: TGCTGAAGAGGGACCAATTAATATTGGTGGGCTGCAGCAGTTTGCTACTGAGGTGTTCAAAGCAATGAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CCA 72 bp | TGCAAACACCCATGGTTCACTGGTTTGCATGGTTTCTaGATTTACTTCTGGGAGACCCCATCTGTTAAACTT | + |
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Preference number: 6 (lower is better) Translates to: CKHPWFTGLHGF*IYFWETPSVKL Trigger: AAGTTTAACAGATGGGGTCTCCCAGAAGTAAATCCAGAAACCATGCAAACCAGTGAACCATGGGTGTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CAA 72 bp | CCAATATTAATTGGTCCCTCTTCAGCAGCATGTAAGTaGCATCCTCCAACACAGAGGTCAGATGTTGGACAA | + |
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Preference number: 6 (lower is better) Translates to: PILIGPSSAACK*HPPTQRSDVGQ Trigger: TTGTCCAACATCTGACCTCTGTGTTGGAGGATGCAACTTACATGCTGCTGAAGAGGGACCAATTAATATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CAA 90 bp | ATCTTCCACCCAGTTTCCGGTTTCATCTTGCTCAGTTCGAACAAATaGCATTGCCACAATCTTTCCATCTTTGACTATAACCTTCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: IFHPVSGFILLSSNK*HCHNLSIFDYNLPW Trigger: CCACGGAAGGTTATAGTCAAAGATGGAAAGATTGTGGCAATGCAATTTGTTCGAACTGAGCAAGATGAAACCGGAAACTGGGTGGAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS TCA 72 bp | GATGCTCATCTCACCAAATGTTCCCAGGTATTGCAGTaGTTTTCCAATTACATCCTTGATGGCAGGAATAGG | + |
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Preference number: 6 (lower is better) Translates to: DAHLTKCSQVLQ*FSNYILDGRNR Trigger: CCTATTCCTGCCATCAAGGATGTAATTGGAAAATCACTGCAATACCTGGGAACATTTGGTGAGATGAGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS GCA 72 bp | TGCTCTTCATCTTCCACCCAGTTTCCGGTTTCATCTTaGTCAGTTCGAACAAATTGCATTGCCACAATCTTT | + |
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Preference number: 6 (lower is better) Translates to: CSSSSTQFPVSS*SVRTNCIATIF Trigger: AAAGATTGTGGCAATGCAATTTGTTCGAACTGAGCAAGATGAAACCGGAAACTGGGTGGAAGATGAAGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS GCA 72 bp | TCCATGATGCTCATCTCACCAAATGTTCCCAGGTATTaGAGTGATTTTCCAATTACATCCTTGATGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SMMLISPNVPRY*SDFPITSLMAG Trigger: TCCTGCCATCAAGGATGTAATTGGAAAATCACTGCAATACCTGGGAACATTTGGTGAGATGAGCATCATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CAA 72 bp | TGGACTTGTGTCAAGCCTTGGAAAATATGGTCCTTTTaGGGTTCTGGCAAGCCTATTCCAATAAATGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: WTCVKPWKIWSF*GSGKPIPINAA Trigger: AGCTGCATTTATTGGAATAGGCTTGCCAGAACCCAAAAAGGACCATATTTTCCAAGGCTTGACACAAGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CAA 72 bp | GTTCGAACAAATTGCATTGCCACAATCTTTCCATCTTaGACTATAACCTTCCGTGGCGAGAGGAAAGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: VRTNCIATIFPS*TITFRGERKGK Trigger: TTTGCCTTTCCTCTCGCCACGGAAGGTTATAGTCAAAGATGGAAAGATTGTGGCAATGCAATTTGTTCGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CAA 72 bp | CTGTTAAACTTGATGGGACTCAATGCTTCTTTCACTTaGGGATCCTCCAGGACAGATCCAAAGGCACTAATA | + |
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Preference number: 6 (lower is better) Translates to: LLNLMGLNASFT*GSSRTDPKALI Trigger: TATTAGTGCCTTTGGATCTGTCCTGGAGGATCCCAAAGTGAAAGAAGCATTGAGTCCCATCAAGTTTAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CAA 72 bp | GTTCCCAGGTATTGCAGTGATTTTCCAATTACATCCTaGATGGCAGGAATAGGCTTTTGCGAGTTAAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: VPRYCSDFPITS*MAGIGFCELKC Trigger: GCACTTTAACTCGCAAAAGCCTATTCCTGCCATCAAGGATGTAATTGGAAAATCACTGCAATACCTGGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CAA 90 bp | TCACCAAATGTTCCCAGGTATTGCAGTGATTTTCCAATTACATCCTaGATGGCAGGAATAGGCTTTTGCGAGTTAAAGTGCTTTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPNVPRYCSDFPITS*MAGIGFCELKCFLW Trigger: CCAGAGAAAGCACTTTAACTCGCAAAAGCCTATTCCTGCCATCAAGGATGTAATTGGAAAATCACTGCAATACCTGGGAACATTTGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CAA 72 bp | AAATTACTCTCCAGCTTCTCACAGGTAAAGCAGTTCTaGTCCGTGTTCCTTTTCCAGTGTTTCTTGTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: KLLSSFSQVKQF*SVFLFQCFLSS Trigger: ACTAGACAAGAAACACTGGAAAAGGAACACGGACAAGAACTGCTTTACCTGTGAGAAGCTGGAGAGTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039177.12 ENSMUST00000149101.3 |
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| CDS CAA 90 bp | TCTTGCTCAGTTCGAACAAATTGCATTGCCACAATCTTTCCATCTTaGACTATAACCTTCCGTGGCGAGAGGAAAGGCAAAAATTCACAT | + |
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Preference number: 6 (lower is better) Translates to: SCSVRTNCIATIFPS*TITFRGERKGKNSH Trigger: ATGTGAATTTTTGCCTTTCCTCTCGCCACGGAAGGTTATAGTCAAAGATGGAAAGATTGTGGCAATGCAATTTGTTCGAACTGAGCAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS TCA 72 bp | ATCTCAAAATTCACGACGTCATATGGGAGTCGAAACTaGGGGATTTCAGAAGTGCTTAAACCACCAACATAT | + |
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Preference number: 6 (lower is better) Translates to: ISKFTTSYGSRN*GISEVLKPPTY Trigger: ATATGTTGGTGGTTTAAGCACTTCTGAAATCCCTCAGTTTCGACTCCCATATGACGTCGTGAATTTTGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS GCA 72 bp | CAGTTTCCGGTTTCATCTTGCTCAGTTCGAACAAATTaGATTGCCACAATCTTTCCATCTTTGACTATAACC | + |
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Preference number: 6 (lower is better) Translates to: QFPVSSCSVRTN*IATIFPSLTIT Trigger: GGTTATAGTCAAAGATGGAAAGATTGTGGCAATGCAATTTGTTCGAACTGAGCAAGATGAAACCGGAAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS CAA 72 bp | CCAGTTTCCGGTTTCATCTTGCTCAGTTCGAACAAATaGCATTGCCACAATCTTTCCATCTTTGACTATAAC | + |
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Preference number: 6 (lower is better) Translates to: PVSGFILLSSNK*HCHNLSIFDYN Trigger: GTTATAGTCAAAGATGGAAAGATTGTGGCAATGCAATTTGTTCGAACTGAGCAAGATGAAACCGGAAACTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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| CDS TCA 72 bp | TTTTACCACAAATTATCTTTACACCAAGGTCCTTCATaGGCTCAATCTCAAAATTCACGACGTCATATGGGA | + |
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Preference number: 6 (lower is better) Translates to: FYHKLSLHQGPS*AQSQNSRRHMG Trigger: TCCCATATGACGTCGTGAATTTTGAGATTGAGCTCATGAAGGACCTTGGTGTAAAGATAATTTGTGGTAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039177.12 |
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