Pregenerated sensors for DPY19L4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045205Ensembl transcript IDs: ENSMUST00000084892.12, ENSMUST00000128024.8, ENSMUST00000139385.8, ENSMUST00000142005.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACACGCATACACACGCATACACACGCATACACACGCATACACATaGGAGGGAGGGAGGGAGGGGCCTAAGCCTCACCTCACTCAACTT | + |
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Preference number: 1 (lower is better) Translates to: GHAYTRIHTHTHAYT*EGGREGPKPHLTQL Trigger: AAGTTGAGTGAGGTGAGGCTTAGGCCCCTCCCTCCCTCCCTCCCATGTGTATGCGTGTGTATGCGTGTGTATGCGTGTGTATGCGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR CCA 90 bp | CAAATGGGAATCAGTTCTCTGCCTCCATCATGTGGGGCCCCCGGATaGAACTCAAATCATCACAGGCTTGGTGGTGGCAGGTGCCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: QMGISSLPPSCGAPG*NSNHHRLGGGRCLS Trigger: GGAAAGGCACCTGCCACCACCAAGCCTGTGATGATTTGAGTTCCATCCGGGGGCCCCACATGATGGAGGCAGAGAACTGATTCCCATTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR GCA 90 bp | AAGACACAGTGGTGGACTGGACGACATCAACACCTCATCATCTACTaGCAAGGAATCTCTAACCCAGGAATCAGCAGGTGCAGGAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: KTQWWTGRHQHLIIY*QGISNPGISRCRRN Trigger: GTTCCTCCTGCACCTGCTGATTCCTGGGTTAGAGATTCCTTGGCAGTAGATGATGAGGTGTTGATGTCGTCCAGTCCACCACTGTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR GCA 90 bp | GAACAGCAGCGTTTCAGATGCCCACTCTCTATCTGTGAGAAACCATaGAGGCTCAAGAAAACTGCACTTGACTTCAAGCAACATGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: EQQRFRCPLSICEKP*RLKKTALDFKQHVC Trigger: ACAGACATGTTGCTTGAAGTCAAGTGCAGTTTTCTTGAGCCTGCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACGCTGCTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR TCA 90 bp | AACTGTGGAGAAGTTAACTCAACTCTCAGTGGTTTGCTCTTACACTaGAAAGCACCTGCATACATCTCCAGAAACTGCTGCACGCTAGTG | + |
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Preference number: 1 (lower is better) Translates to: NCGEVNSTLSGLLLH*KAPAYISRNCCTLV Trigger: CACTAGCGTGCAGCAGTTTCTGGAGATGTATGCAGGTGCTTTTCAGTGTAAGAGCAAACCACTGAGAGTTGAGTTAACTTCTCCACAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR TCA 90 bp | TCGTCCTGTTCCCCTAAGGATGTGCTCGATCACTTGAGCAGCAGGTaGCAGGAACAGCATCATAAAAACAATCAACTTCCCTTTATGTTT | + |
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Preference number: 1 (lower is better) Translates to: SSCSPKDVLDHLSSR*QEQHHKNNQLPFMF Trigger: AAACATAAAGGGAAGTTGATTGTTTTTATGATGCTGTTCCTGTCACCTGCTGCTCAAGTGATCGAGCACATCCTTAGGGGAACAGGACGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR CCA 90 bp | TTGGAAGATCAGGAGCTCAACCATATAGTGAATTCTGGGCTAACCTaGACTATATTCAACTCTGTCTCAAAAACAAATGACAAATCAATA | + |
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Preference number: 1 (lower is better) Translates to: LEDQELNHIVNSGLT*TIFNSVSKTNDKSI Trigger: TATTGATTTGTCATTTGTTTTTGAGACAGAGTTGAATATAGTCCAGGTTAGCCCAGAATTCACTATATGGTTGAGCTCCTGATCTTCCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGGTGGTGCTCATGGTTGTAAGCCCAACTTCCAAGAAGCTGACACTGGATTGGGAATCAGTTCTCTaGCTCCATCATGTGGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: PRVVLMVVSPTSKKLTLDWESVL*LHHVGP Trigger: GGGCCCCACATGATGGAGGCAGAGAACTGATTCCCA...ATCCAGTGTCAGCTTCTTGGAAGTTGGGCTTACAACCATGAGCACCACCCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAAAAGACCGAGATAGTCTCTCACCATACAGTGAGATCCAGGCCAGTCTGTGTGGGGCCCCCGGATaGAACTCAAATCATCACAGG | + |
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Preference number: 2 (lower is better) Translates to: SSKDRDSLSPYSEIQASLCGAPG*NSNHHR Trigger: CCTGTGATGATTTGAGTTCCATCCGGGGGCCCCACA...CAGACTGGCCTGGATCTCACTGTATGGTGAGAGACTATCTCGGTCTTTTGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAAAGCTGTCAGAAAGACACAGTGGTGGACTGGACGACATCAACACCTCACCCACTCTCTATCTGTaGGAAACCATGCAGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: GRKLSERHSGGLDDINTSPTLYL*ETMQAQ Trigger: TTGAGCCTGCATGGTTTCTCACAGATAGAGAGTGGG...TGAGGTGTTGATGTCGTCCAGTCCACCACTGTGTCTTTCTGACAGCTTTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCAATGTGCTCGATCACTTaGGCAGCAGGTGACAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPMCSIT*AAGDRN Trigger: GTTCCTGTCACCTGCTGCTCAAGTGATCGAGCACAT...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGGTGGTGCTCATGGTTGTAAGCCCAACTTCCAAGAAGCTGACACTGGATAGTCTGGCACCCTGCTaGAACAAGAACGAGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: PRVVLMVVSPTSKKLTLDSLAPC*NKNEKR Trigger: TCTTTTCTCGTTCTTGTTGCAGCAGGGTGCCAGACT...ATCCAGTGTCAGCTTCTTGGAAGTTGGGCTTACAACCATGAGCACCACCCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCACCCACTCTCTATCTGTaGGAAACCATGCAGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPPTLYL*ETMQAQ Trigger: TTGAGCCTGCATGGTTTCTCACAGATAGAGAGTGGG...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCACACTTGAGCAGCAGGTaGCAGGAACAGCATCATAAA | + |
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Preference number: 2 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPHLSSR*QEQHHK Trigger: TTTATGATGCTGTTCCTGTCACCTGCTGCTCAAGTG...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCAATCTCCAGAAACTGCTaGACGCTAGTGCACACATTG | + |
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Preference number: 2 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPISRNC*TLVHTL Trigger: CAATGTGTGCACTAGCGTGCAGCAGTTTCTGGAGAT...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCATACATCTCCAGAAACTaGTGCACGCTAGTGCACACA | + |
|
Preference number: 2 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPYISRN*CTLVHT Trigger: TGTGTGCACTAGCGTGCAGCAGTTTCTGGAGATGTA...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCACCATACAGTGAGATCCAGGCCAGTCTGGCACCCTGCTGCAACAAGAACGAGAAATTTCAGCACATaGTCATTTTCTTTGTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SHHTVRSRPVWHPAATRTRNFST*SFSLCG Trigger: CCCACACAAAGAAAATGAGCATGTGCTGAAATTTCT...CGTTCTTGTTGCAGCAGGGTGCCAGACTGGCCTGGATCTCACTGTATGGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR-3UTR GCA 90 bp | TTAATTGTGTGTGTCACAGTATGCACACTTACACATACAGCTGTGCACATAAGACTTGGTGGTGGCAGGTaGCTTTCCCCCACTGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LIVCVTVCTLTHTAVHIRLGGGR*LSPTEP Trigger: TGGCTCAGTGGGGGAAAGGCACCTGCCACCACCAAG...TCTTATGTGCACAGCTGTATGTGTAAGTGTGCATACTGTGACACACACAATTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAAAAGACCGAGATAGTCTCTCACCATACAGTGAGATCCAGGCCAGTCTGCGTAAGGAGTCCAAATaGATTTCAAGCCCAGCAACA | + |
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Preference number: 2 (lower is better) Translates to: SSKDRDSLSPYSEIQASLRKESK*ISSPAT Trigger: TGTTGCTGGGCTTGAAATTCATTTGGACTCCTTACG...CAGACTGGCCTGGATCTCACTGTATGGTGAGAGACTATCTCGGTCTTTTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAGAAAGCTGTCAGAAAGACACAGTGGTGGACTGGACGACATCAACACCTCAATCTGTGAGAAACCATaGAGGCTCAAGAAAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: GRKLSERHSGGLDDINTSICEKP*RLKKTA Trigger: TGCAGTTTTCTTGAGCCTGCATGGTTTCTCACAGAT...TGAGGTGTTGATGTCGTCCAGTCCACCACTGTGTCTTTCTGACAGCTTTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR CCA 90 bp | TTAATTGTGTGTGTCACAGTATGCACACTTACACATACAGCTGTGCACATAAGATCATCACAGGCTTGGTaGTGGCAGGTGCCTTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LIVCVTVCTLTHTAVHIRSSQAW*WQVPFP Trigger: GGGGAAAGGCACCTGCCACCACCAAGCCTGTGATGA...TCTTATGTGCACAGCTGTATGTGTAAGTGTGCATACTGTGACACACACAATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAAAAGACCGAGATAGTCTCTCACCATACAGTGAGATCCAGGCCAGTCTGCCACCACCCCTGTCTTaGTTTCATTTACCAGCATTT | + |
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Preference number: 2 (lower is better) Translates to: SSKDRDSLSPYSEIQASLPPPLS*FHLPAF Trigger: AAATGCTGGTAAATGAAACCAAGACAGGGGTGGTGG...CAGACTGGCCTGGATCTCACTGTATGGTGAGAGACTATCTCGGTCTTTTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR-3UTR GCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTCCAGGAATCAGCAGGTaGAGGAGGAACAGCAGCGTT | + |
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Preference number: 2 (lower is better) Translates to: DSICTLWKSVRTLRLLATPGISR*RRNSSV Trigger: AACGCTGCTGTTCCTCCTGCACCTGCTGATTCCTGG...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAAAAGACCGAGATAGTCTCTCACCATACAGTGAGATCCAGGCCAGTCTGGTGTGTGTCACAGTATaGACACTTACACATACAGCT | + |
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Preference number: 2 (lower is better) Translates to: SSKDRDSLSPYSEIQASLVCVTV*TLTHTA Trigger: AGCTGTATGTGTAAGTGTGCATACTGTGACACACAC...CAGACTGGCCTGGATCTCACTGTATGGTGAGAGACTATCTCGGTCTTTTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR-3UTR TCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTATGTGCTCGATCACTTaGGCAGCAGGTGACAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: DSICTLWKSVRTLRLLATMCSIT*AAGDRN Trigger: GTTCCTGTCACCTGCTGCTCAAGTGATCGAGCACAT...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGTCCATATTACATCCAGAGTCCATATTACATCCCTTATCAAGTAGGTTTCCAGGAATCAGCAGGTaGAGGAGGAACAGCAGCGTT | + |
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Preference number: 2 (lower is better) Translates to: TESILHPESILHPLSSRFPGISR*RRNSSV Trigger: AACGCTGCTGTTCCTCCTGCACCTGCTGATTCCTGG...AAACCTACTTGATAAGGGATGTAATATGGACTCTGGATGTAATATGGACTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCATGTTCAGAGAAAATGTaGCTAGATTGTATGCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPCSEKM*LDCMLH Trigger: GTGGAGCATACAATCTAGCCACATTTTCTCTGAACA...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTTGCTACTGCTCCTCCTaGATGCTGGGATTAAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: DSICTLWKSVRTLRLLATCYCSS*MLGLKE Trigger: CTCTTTTAATCCCAGCATTCAGGAGGAGCAGTAGCA...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGTCCATATTACATCCAGAGTCCATATTACATCCCTTATCAAGTAGGTTTTTGTTGTGCTGGGGATaGAGCCCAGAAGCTCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: TESILHPESILHPLSSRFLLCWG*SPEALV Trigger: TACAAGAGCTTCTGGGCTTCATCCCCAGCACAACAA...AAACCTACTTGATAAGGGATGTAATATGGACTCTGGATGTAATATGGACTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGTCCATATTACATCCAGAGTCCATATTACATCCCTTATCAAGTAGGTTTACATCCTGCAAACTCTaGCCCTCAGTGCAGCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: TESILHPESILHPLSSRFTSCKL*PSVQLY Trigger: GTAAAGCTGCACTGAGGGGCAGAGTTTGCAGGATGT...AAACCTACTTGATAAGGGATGTAATATGGACTCTGGATGTAATATGGACTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGTCCATATTACATCCAGAGTCCATATTACATCCCTTATCAAGTAGGTTTCTCTGTGTGCTGTCCTaGAACTCACTATGTAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: TESILHPESILHPLSSRFLCVLS*NSLCRP Trigger: TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAG...AAACCTACTTGATAAGGGATGTAATATGGACTCTGGATGTAATATGGACTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTCAAGAAAACTGCACTTaGCTTCAAGCAACATGTCTG | + |
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Preference number: 2 (lower is better) Translates to: DSICTLWKSVRTLRLLATQENCT*LQATCL Trigger: CAGACATGTTGCTTGAAGTCAAGTGCAGTTTTCTTG...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR GCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTATCTGTGAGAAACCATaGAGGCTCAAGAAAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: DSICTLWKSVRTLRLLATICEKP*RLKKTA Trigger: TGCAGTTTTCTTGAGCCTGCATGGTTTCTCACAGAT...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR CCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTCGTGAGGCACCACACTaGCTTACAATTTCCTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: DSICTLWKSVRTLRLLATREAPH*LTISFN Trigger: ATTAAAGGAAATTGTAAGCCAGTGTGGTGCCTCACG...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR CAA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATaGGCAACTTATGTTAATGTCCTAGACAGAAAAGCCACTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: DSICTLWKSVRTLRL*ATYVNVLDRKATVC Trigger: ACAGACAGTGGCTTTTCTGTCTAGGACATTAACATAAGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGTCCATATTACATCCAGAGTCCATATTACATCCCTTATCAAGTAGGTTTCAAGAAAACTGCACTTaGCTTCAAGCAACATGTCTG | + |
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Preference number: 2 (lower is better) Translates to: TESILHPESILHPLSSRFQENCT*LQATCL Trigger: CAGACATGTTGCTTGAAGTCAAGTGCAGTTTTCTTG...AAACCTACTTGATAAGGGATGTAATATGGACTCTGGATGTAATATGGACTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTACAAGAATGACCACATaGGTACTCAGTGTGTATTTG | + |
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Preference number: 2 (lower is better) Translates to: DSICTLWKSVRTLRLLATTRMTT*VLSVYL Trigger: CAAATACACACTGAGTACTCATGTGGTCATTCTTGT...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGTCCATATTACATCCAGAGTCCATATTACATCCCTTATCAAGTAGGTTTACACTGAAAAGCACCTaGATACATCTCCAGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: TESILHPESILHPLSSRFTLKST*IHLQKL Trigger: CAGTTTCTGGAGATGTATGCAGGTGCTTTTCAGTGT...AAACCTACTTGATAAGGGATGTAATATGGACTCTGGATGTAATATGGACTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTCAGTCCAGATGGAAGTaGATCAACATATCTATGATA | + |
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Preference number: 2 (lower is better) Translates to: DSICTLWKSVRTLRLLATQSRWK*INISMI Trigger: TATCATAGATATGTTGATTCACTTCCATCTGGACTG...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR GCA 72 bp | TCCTCCCACCCACATCCTGCAAACTCTGCCCCTCAGTaGAGCTTTACGGCTGACCCTTCAGCGCAGCTTTAC | + |
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Preference number: 3 (lower is better) Translates to: SSHPHPANSAPQ*SFTADPSAQLY Trigger: GTAAAGCTGCGCTGAAGGGTCAGCCGTAAAGCTGCACTGAGGGGCAGAGTTTGCAGGATGTGGGTGGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR TCA 72 bp | TCCTGCAAACTCTGCCCCTCAGTGCAGCTTTACGGCTaGCCCTTCAGCGCAGCTTTACGGCTGATCCTAGCA | + |
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Preference number: 3 (lower is better) Translates to: SCKLCPSVQLYG*PFSAALRLILA Trigger: TGCTAGGATCAGCCGTAAAGCTGCGCTGAAGGGTCAGCCGTAAAGCTGCACTGAGGGGCAGAGTTTGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR CCA 72 bp | ATCAGTTCTCTGCCTCCATCATGTGGGGCCCCCGGATaGAACTCAAATCATCACAGGCTTGGTGGTGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: ISSLPPSCGAPG*NSNHHRLGGGR Trigger: CCTGCCACCACCAAGCCTGTGATGATTTGAGTTCCATCCGGGGGCCCCACATGATGGAGGCAGAGAACTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR-3UTR CAA 90 bp | GACCGAGATAGTCTCTCACCATACAGTGAGATCCAGGCCAGTCTGGCACCCTGCTCCACCACCCCTGTCTaGGTTTCATTTACCAGCATT | + |
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Preference number: 3 (lower is better) Translates to: DRDSLSPYSEIQASLAPCSTTPV*VSFTSI Trigger: AATGCTGGTAAATGAAACCAAGACAGGGGTGGTGGA...GCAGGGTGCCAGACTGGCCTGGATCTCACTGTATGGTGAGAGACTATCTCGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR GCA 72 bp | AATCAGCAGGTGCAGGAGGAACAGCAGCGTTTCAGATaGCCACTCTCTATCTGTGAGAAACCATGCAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: NQQVQEEQQRFR*PLSICEKPCRL Trigger: GAGCCTGCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACGCTGCTGTTCCTCCTGCACCTGCTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR GCA 72 bp | TACTGCCAAGGAATCTCTAACCCAGGAATCAGCAGGTaGAGGAGGAACAGCAGCGTTTCAGATGCCCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: YCQGISNPGISR*RRNSSVSDAHS Trigger: AGAGTGGGCATCTGAAACGCTGCTGTTCCTCCTGCACCTGCTGATTCCTGGGTTAGAGATTCCTTGGCAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| 3UTR CCA 72 bp | ACAACAAATGGGAATCAGTTCTCTGCCTCCATCATGTaGGGCCCCCGGATGGAACTCAAATCATCACAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TTNGNQFSASIM*GPRMELKSSQA Trigger: AGCCTGTGATGATTTGAGTTCCATCCGGGGGCCCCACATGATGGAGGCAGAGAACTGATTCCCATTTGTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| 3UTR TCA 72 bp | TCACAGGCTTGGTGGTGGCAGGTGCCTTTCCCCCACTaGGCCATCTTTATGGCCCTAACATTTTGTATAACT | + |
|
Preference number: 3 (lower is better) Translates to: SQAWWWQVPFPH*AIFMALTFCIT Trigger: AGTTATACAAAATGTTAGGGCCATAAAGATGGCTCAGTGGGGGAAAGGCACCTGCCACCACCAAGCCTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| 3UTR CCA 72 bp | ATAGTCTCTCACCATACAGTGAGATCCAGGCCAGTCTaGCACCCTGCTGCAACAAGAACGAGAAAAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: IVSHHTVRSRPV*HPAATRTRKEN Trigger: GTTTTCTTTTCTCGTTCTTGTTGCAGCAGGGTGCCAGACTGGCCTGGATCTCACTGTATGGTGAGAGACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTACACATACAGCTGTGCACATAAGACAACAAATGGGAATCAGTTCTCTGCCTCGCCTGGAGAGACTCTaGACAAAGGAGCCAGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LTHTAVHIRQQMGISSLPRLERL*TKEPVQ Trigger: CTGAACTGGCTCCTTTGTCAAGAGTCTCTCCAGGCG...AGGCAGAGAACTGATTCCCATTTGTTGTCTTATGTGCACAGCTGTATGTGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| 3UTR TCA 72 bp | AACTTCCAAGAAGCTGACACTGGATGGCTATGGGTTTaGGGATTCCCTAACCGATGGATAAAGACCCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: NFQEADTGWLWV*GFPNRWIKTPS Trigger: AGATGGGGTCTTTATCCATCGGTTAGGGAATCCTCAAACCCATAGCCATCCAGTGTCAGCTTCTTGGAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| 3UTR GCA 72 bp | AACTCTCAGTGGTTTGCTCTTACACTGAAAAGCACCTaGATACATCTCCAGAAACTGCTGCACGCTAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NSQWFALTLKST*IHLQKLLHASA Trigger: TGCACTAGCGTGCAGCAGTTTCTGGAGATGTATGCAGGTGCTTTTCAGTGTAAGAGCAAACCACTGAGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| 3UTR CCA 72 bp | GTACTAAGGAAGAAAGCTGTCAGAAAGACACAGTGGTaGACTGGACGACATCAACACCTCATCATCTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: VLRKKAVRKTQW*TGRHQHLIIYC Trigger: GCAGTAGATGATGAGGTGTTGATGTCGTCCAGTCCACCACTGTGTCTTTCTGACAGCTTTCTTCCTTAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| 3UTR TCA 72 bp | CAAACGCGGCCAACATGCACACGTAAGGAGTCCAAATaGATTTCAAGCCCAGCAACAGAGTGTGAATTACAT | + |
|
Preference number: 3 (lower is better) Translates to: QTRPTCTRKESK*ISSPATECELH Trigger: ATGTAATTCACACTCTGTTGCTGGGCTTGAAATTCATTTGGACTCCTTACGTGTGCATGTTGGCCGCGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| 3UTR GCA 72 bp | CGTTTCAGATGCCCACTCTCTATCTGTGAGAAACCATaGAGGCTCAAGAAAACTGCACTTGACTTCAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RFRCPLSICEKP*RLKKTALDFKQ Trigger: TTGCTTGAAGTCAAGTGCAGTTTTCTTGAGCCTGCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| 3UTR GCA 72 bp | CCCGTCTCTACCTCTCACGGGCTAGGATCAGAGATGTaGATCACCACACACAGCAAAACTAGATATTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PVSTSHGLGSEM*ITTHSKTRYFK Trigger: TTTAAAATATCTAGTTTTGCTGTGTGTGGTGATGCACATCTCTGATCCTAGCCCGTGAGAGGTAGAGACGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAATTGTGTGTGTCACAGTATGCACACTTACACATACAGCTGTGCACATAAGACAAATCATCACAGGCTaGGTGGTGGCAGGTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LIVCVTVCTLTHTAVHIRQIITG*VVAGAF Trigger: AAAGGCACCTGCCACCACCAAGCCTGTGATGATTTG...TCTTATGTGCACAGCTGTATGTGTAAGTGTGCATACTGTGACACACACAATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCAAAAGACCGAGATAGTCTCTCACCATACAGTGAGATCCAGGCCAGTCTGCTTGTTTTTATGTTGTaGTTGTTGTCCTGGGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SSKDRDSLSPYSEIQASLLVFML*LLSWGF Trigger: AAAACCCCAGGACAACAACAACAACATAAAAACAAG...CAGACTGGCCTGGATCTCACTGTATGGTGAGAGACTATCTCGGTCTTTTGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTCAGTCTTTTCTTCATTaGTCTGCCCTTCTCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: DSICTLWKSVRTLRLLATQSFLH*SALLCP Trigger: TGGGCAGAGAAGGGCAGACAAATGAAGAAAAGACTG...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| 3UTR CCA 72 bp | CAGGAGCTCAACCATATAGTGAATTCTGGGCTAACCTaGACTATATTCAACTCTGTCTCAAAAACAAATGAC | + |
|
Preference number: 3 (lower is better) Translates to: QELNHIVNSGLT*TIFNSVSKTND Trigger: GTCATTTGTTTTTGAGACAGAGTTGAATATAGTCCAGGTTAGCCCAGAATTCACTATATGGTTGAGCTCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| 3UTR GCA 72 bp | GACTACCAAGATATTCAGAGTTCATCAGACATACAGTaGCACAGCTGCATGTTTAGTCAAAATAAGCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: DYQDIQSSSDIQ*HSCMFSQNKHE Trigger: TTCATGCTTATTTTGACTAAACATGCAGCTGTGGCACTGTATGTCTGATGAACTCTGAATATCTTGGTAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| CDS-3UTR CCA 90 bp | GACCGAGATAGTCTCTCACCATACAGTGAGATCCAGGCCAGTCTGGCACCCTGCATAGCGCTGTCTCCCTaGAAGGTGATCTCTCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: DRDSLSPYSEIQASLAPCIALSP*KVISRS Trigger: CGAGCGAGAGATCACCTTCCAGGGAGACAGCGCTAT...GCAGGGTGCCAGACTGGCCTGGATCTCACTGTATGGTGAGAGACTATCTCGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| CDS-3UTR GCA 90 bp | GACCGAGATAGTCTCTCACCATACAGTGAGATCCAGGCCAGTCTGGCACCCTGCTTCATTGCTGCCAGTTaGTTGATAGAGAACACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DRDSLSPYSEIQASLAPCFIAAS*LIENTG Trigger: GCCAGTGTTCTCTATCAAGCAACTGGCAGCAATGAA...GCAGGGTGCCAGACTGGCCTGGATCTCACTGTATGGTGAGAGACTATCTCGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGAACAGCAGCGTTTCAGATGCCCACTCTCTATCTGTGAGAAACCATGCTCCTGCGAACACAGCTaGAACTGGAGCTTGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEEQQRFRCPLSICEKPCSCEHS*NWSLPL Trigger: AAGAGGCAAGCTCCAGTTGCAGCTGTGTTCGCAGGA...GCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACGCTGCTGTTCCTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAGGAACAGCAGCGTTTCAGATGCCCACTCTCTATCTGTGAGAAACCATGCACTCCCACACCATCATaGAAGTGTACGTCGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QEEQQRFRCPLSICEKPCTPTPS*KCTSRY Trigger: GTACCTCGACGTACACTTTCATGATGGTGTGGGAGT...GCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACGCTGCTGTTCCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCACAACTGTGGGCTTCCTaGGAACACAGCTGCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPQLWAS*EHSCNW Trigger: CCAGTTGCAGCTGTGTTCGCAGGAAGCCCACAGTTG...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCAATAGCGCTGTCTCCCTaGAAGGTGATCTCTCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPIALSP*KVISRS Trigger: CGAGCGAGAGATCACCTTCCAGGGAGACAGCGCTAT...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
||
| CDS-3UTR TCA 90 bp | CCAAGGGTGGTGCTCATGGTTGTAAGCCCAACTTCCAAGAAGCTGACACTGGATTCTGCTTTGGCTTCCTaGCTTCCTGAAGTTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PRVVLMVVSPTSKKLTLDSALAS*LPEVLC Trigger: GCAAAGAACTTCAGGAAGTCAGGAAGCCAAAGCAGA...ATCCAGTGTCAGCTTCTTGGAAGTTGGGCTTACAACCATGAGCACCACCCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGAACAGCAGCGTTTCAGATGCCCACTCTCTATCTGTGAGAAACCATGCCAGCAGCAGGGATACTaGCTGAAGAAACAAGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: QEEQQRFRCPLSICEKPCQQQGY*LKKQDV Trigger: TACGTCTTGTTTCTTCAGGCAGTATCCCTGCTGCTG...GCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACGCTGCTGTTCCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCATCCTGCGAACACAGCTaGAACTGGAGCTTGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPSCEHS*NWSLPL Trigger: AAGAGGCAAGCTCCAGTTGCAGCTGTGTTCGCAGGA...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAGGAACAGCAGCGTTTCAGATGCCCACTCTCTATCTGTGAGAAACCATGCGGCTTCCTGACTTCCTaGAGTTCTTTGCTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QEEQQRFRCPLSICEKPCGFLTS*SSLLFP Trigger: AGGAAAAAGCAAAGAACTTCAGGAAGTCAGGAAGCC...GCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACGCTGCTGTTCCTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
||
| CDS-3UTR TCA 90 bp | GGAAGAAAGCTGTCAGAAAGACACAGTGGTGGACTGGACGACATCAACACCTCATCTGCTTTGGCTTCCTaGCTTCCTGAAGTTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRKLSERHSGGLDDINTSSALAS*LPEVLC Trigger: GCAAAGAACTTCAGGAAGTCAGGAAGCCAAAGCAGA...TGAGGTGTTGATGTCGTCCAGTCCACCACTGTGTCTTTCTGACAGCTTTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
||
| CDS-3UTR TCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCAACTCCCACACCATCATaGAAGTGTACGTCGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPTPTPS*KCTSRY Trigger: GTACCTCGACGTACACTTTCATGATGGTGTGGGAGT...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCAAAAGACCGAGATAGTCTCTCACCATACAGTGAGATCCAGGCCAGTCTGTCTGCGGATCTTCTCTaGTTTGGCTTCCTGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSKDRDSLSPYSEIQASLSADLL*FGFLTS Trigger: GGAAGTCAGGAAGCCAAAGCAGAGAAGATCCGCAGA...CAGACTGGCCTGGATCTCACTGTATGGTGAGAGACTATCTCGGTCTTTTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCATCTCGCTCGAGCTCCTaGCTGTTGGAAAACCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPSRSSS*LLENQN Trigger: ATTCTGGTTTTCCAACAGGCAGGAGCTCGAGCGAGA...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
||
| CDS-3UTR CCA 90 bp | TCTCACCATACAGTGAGATCCAGGCCAGTCTGGCACCCTGCTGCAACAAGAACGACTGGCAATAAGTTCTaGGTACAAAGACATCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SHHTVRSRPVWHPAATRTTGNKF*VQRHLL Trigger: CAACAGATGTCTTTGTACCCAGAACTTATTGCCAGT...CGTTCTTGTTGCAGCAGGGTGCCAGACTGGCCTGGATCTCACTGTATGGTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCAAAAGACCGAGATAGTCTCTCACCATACAGTGAGATCCAGGCCAGTCTGCTGCGAGACAGCCAATaGCGATCTTTGCAAAACGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKDRDSLSPYSEIQASLLRDSQ*RSLQNV Trigger: AACGTTTTGCAAAGATCGTCATTGGCTGTCTCGCAG...CAGACTGGCCTGGATCTCACTGTATGGTGAGAGACTATCTCGGTCTTTTGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAGGAACAGCAGCGTTTCAGATGCCCACTCTCTATCTGTGAGAAACCATGCTTTTTCCCATTCAGCTaGAGGCACTTAACAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QEEQQRFRCPLSICEKPCFFPFS*RHLTSM Trigger: CATGCTTGTTAAGTGCCTTCAGCTGAATGGGAAAAA...GCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACGCTGCTGTTCCTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGAAAGCTGTCAGAAAGACACAGTGGTGGACTGGACGACATCAACACCTCATGGTTCCCAGCTCATTaGAGATGGCATCTTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: GRKLSERHSGGLDDINTSWFPAH*RWHLLQ Trigger: TTGTAGAAGATGCCATCTGCAATGAGCTGGGAACCA...TGAGGTGTTGATGTCGTCCAGTCCACCACTGTGTCTTTCTGACAGCTTTCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCACTTCCTGAAGTTCTTTaGTTTTTCCTTTGGCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPLPEVL*FFLWRG Trigger: ACCCCGCCAAAGGAAAAAGCAAAGAACTTCAGGAAG...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
||
| CDS-3UTR GCA 90 bp | TCTTCAAAAGACCGAGATAGTCTCTCACCATACAGTGAGATCCAGGCCAGTCTGCTTCCTGAAGTTCTTTaGTTTTTCCTTTGGCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSKDRDSLSPYSEIQASLLPEVL*FFLWRG Trigger: ACCCCGCCAAAGGAAAAAGCAAAGAACTTCAGGAAG...CAGACTGGCCTGGATCTCACTGTATGGTGAGAGACTATCTCGGTCTTTTGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGAACAGCAGCGTTTCAGATGCCCACTCTCTATCTGTGAGAAACCATGCACTGGCAATAAGTTCTaGGTACAAAGACATCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEEQQRFRCPLSICEKPCTGNKF*VQRHLL Trigger: CAACAGATGTCTTTGTACCCAGAACTTATTGCCAGT...GCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACGCTGCTGTTCCTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
||
| CDS-3UTR TCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCACCGTTCATGGTAAGCTaGCAAGTAGAAAACATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPPFMVS*QVENMH Trigger: ATGCATGTTTTCTACTTGTCAGCTTACCATGAACGG...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
||
| CDS-3UTR GCA 90 bp | CTTACACATACAGCTGTGCACATAAGACAACAAATGGGAATCAGTTCTCTGCCTTCTCGCTCGAGCTCCTaGCTGTTGGAAAACCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LTHTAVHIRQQMGISSLPSRSSS*LLENQN Trigger: ATTCTGGTTTTCCAACAGGCAGGAGCTCGAGCGAGA...AGGCAGAGAACTGATTCCCATTTGTTGTCTTATGTGCACAGCTGTATGTGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGAACAGCAGCGTTTCAGATGCCCACTCTCTATCTGTGAGAAACCATGCAGAAATTTCAGCACATaGTCATTTTCTTTGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QEEQQRFRCPLSICEKPCRNFST*SFSLCG Trigger: CCCACACAAAGAAAATGAGCATGTGCTGAAATTTCT...GCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACGCTGCTGTTCCTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| CDS-3UTR GCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTCAACTGTGGGCTTCCTaGGAACACAGCTGCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSICTLWKSVRTLRLLATQLWAS*EHSCNW Trigger: CCAGTTGCAGCTGTGTTCGCAGGAAGCCCACAGTTG...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
||
| CDS-3UTR TCA 90 bp | CTTACACATACAGCTGTGCACATAAGACAACAAATGGGAATCAGTTCTCTGCCTGGCTTCCTGACTTCCTaGAGTTCTTTGCTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTHTAVHIRQQMGISSLPGFLTS*SSLLFP Trigger: AGGAAAAAGCAAAGAACTTCAGGAAGTCAGGAAGCC...AGGCAGAGAACTGATTCCCATTTGTTGTCTTATGTGCACAGCTGTATGTGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| CDS-3UTR TCA 90 bp | TTAATTGTGTGTGTCACAGTATGCACACTTACACATACAGCTGTGCACATAAGAACTCCCACACCATCATaGAAGTGTACGTCGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LIVCVTVCTLTHTAVHIRTPTPS*KCTSRY Trigger: GTACCTCGACGTACACTTTCATGATGGTGTGGGAGT...TCTTATGTGCACAGCTGTATGTGTAAGTGTGCATACTGTGACACACACAATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
||
| CDS-3UTR TCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTCTGCGAGACAGCCAATaGCGATCTTTGCAAAACGTT | + |
|
Preference number: 4 (lower is better) Translates to: DSICTLWKSVRTLRLLATLRDSQ*RSLQNV Trigger: AACGTTTTGCAAAGATCGTCATTGGCTGTCTCGCAG...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
||
| CDS-3UTR GCA 90 bp | ACAGAGTCCATATTACATCCAGAGTCCATATTACATCCCTTATCAAGTAGGTTTTCTGCGGATCTTCTCTaGTTTGGCTTCCTGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TESILHPESILHPLSSRFSADLL*FGFLTS Trigger: GGAAGTCAGGAAGCCAAAGCAGAGAAGATCCGCAGA...AAACCTACTTGATAAGGGATGTAATATGGACTCTGGATGTAATATGGACTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
||
| CDS-3UTR GCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTACCACTAATAACGGCTaGGAGACAGCCAATGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: DSICTLWKSVRTLRLLATTTNNG*ETANDD Trigger: ATCGTCATTGGCTGTCTCGCAGCCGTTATTAGTGGT...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
||
| CDS-3UTR GCA 90 bp | TTAATTGTGTGTGTCACAGTATGCACACTTACACATACAGCTGTGCACATAAGACAGCAGCAGGGATACTaGCTGAAGAAACAAGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: LIVCVTVCTLTHTAVHIRQQQGY*LKKQDV Trigger: TACGTCTTGTTTCTTCAGGCAGTATCCCTGCTGCTG...TCTTATGTGCACAGCTGTATGTGTAAGTGTGCATACTGTGACACACACAATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| CDS-3UTR CCA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCAAATGTAGAAATACACTaGTTCGATCACTTCATTGCT | + |
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Preference number: 4 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPNVEIH*FDHFIA Trigger: AGCAATGAAGTGATCGAACCAGTGTATTTCTACATT...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
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| CDS-3UTR GCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTTTCATTGCTGCCAGTTaGTTGATAGAGAACACTGGC | + |
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Preference number: 4 (lower is better) Translates to: DSICTLWKSVRTLRLLATFIAAS*LIENTG Trigger: GCCAGTGTTCTCTATCAAGCAACTGGCAGCAATGAA...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
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| CDS-3UTR GCA 90 bp | ACAGAGTCCATATTACATCCAGAGTCCATATTACATCCCTTATCAAGTAGGTTTCAGCAGCAGGGATACTaGCTGAAGAAACAAGACGTA | + |
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Preference number: 4 (lower is better) Translates to: TESILHPESILHPLSSRFQQQGY*LKKQDV Trigger: TACGTCTTGTTTCTTCAGGCAGTATCCCTGCTGCTG...AAACCTACTTGATAAGGGATGTAATATGGACTCTGGATGTAATATGGACTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS-3UTR GCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTTGGTTCCCAGCTCATTaGAGATGGCATCTTCTACAA | + |
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Preference number: 4 (lower is better) Translates to: DSICTLWKSVRTLRLLATWFPAH*RWHLLQ Trigger: TTGTAGAAGATGCCATCTGCAATGAGCTGGGAACCA...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS-3UTR TCA 90 bp | TTAATTGTGTGTGTCACAGTATGCACACTTACACATACAGCTGTGCACATAAGACCGTTCATGGTAAGCTaGCAAGTAGAAAACATGCAT | + |
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Preference number: 4 (lower is better) Translates to: LIVCVTVCTLTHTAVHIRPFMVS*QVENMH Trigger: ATGCATGTTTTCTACTTGTCAGCTTACCATGAACGG...TCTTATGTGCACAGCTGTATGTGTAAGTGTGCATACTGTGACACACACAATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| CDS-3UTR TCA 90 bp | ACAGAGTCCATATTACATCCAGAGTCCATATTACATCCCTTATCAAGTAGGTTTTTTTTCCCATTCAGCTaGAGGCACTTAACAAGCATG | + |
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Preference number: 4 (lower is better) Translates to: TESILHPESILHPLSSRFFFPFS*RHLTSM Trigger: CATGCTTGTTAAGTGCCTTCAGCTGAATGGGAAAAA...AAACCTACTTGATAAGGGATGTAATATGGACTCTGGATGTAATATGGACTCTGT 39% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS-3UTR GCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTTACAAAGACATCTGTTaGATGGCGTTGATAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: DSICTLWKSVRTLRLLATYKDIC*MALIVF Trigger: GAAGACTATCAACGCCATGCAACAGATGTCTTTGTA...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
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| CDS-3UTR GCA 90 bp | TTAATTGTGTGTGTCACAGTATGCACACTTACACATACAGCTGTGCACATAAGATACAAAGACATCTGTTaGATGGCGTTGATAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LIVCVTVCTLTHTAVHIRYKDIC*MALIVF Trigger: GAAGACTATCAACGCCATGCAACAGATGTCTTTGTA...TCTTATGTGCACAGCTGTATGTGTAAGTGTGCATACTGTGACACACACAATTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| 3UTR CAA 72 bp | TGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATaGGCAACTTATGTTAATGTCCTAGACAGAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: CTLWKSVRTLRL*ATYVNVLDRKA Trigger: GGCTTTTCTGTCTAGGACATTAACATAAGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS-3UTR TCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTTGCAAAACGTTGAAATaGCACATATTTTGGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: DSICTLWKSVRTLRLLATCKTLK*HIFWSS Trigger: AGAGCTCCAAAATATGTGTCATTTCAACGTTTTGCA...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
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| CDS-3UTR GCA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTAGAAATTTCAGCACATaGTCATTTTCTTTGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: DSICTLWKSVRTLRLLATRNFST*SFSLCG Trigger: CCCACACAAAGAAAATGAGCATGTGCTGAAATTTCT...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| 3UTR CAA 72 bp | TTTGTTATATTAAGAGCAAATATGTTCAATCTTTCTTaGAGGAATTCCTCCCACCCACATCCTGCAAACTCT | + |
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Preference number: 4 (lower is better) Translates to: FVILRANMFNLS*RNSSHPHPANS Trigger: AGAGTTTGCAGGATGTGGGTGGGAGGAATTCCTCAAAGAAAGATTGAACATATTTGCTCTTAATATAACAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS-3UTR CAA 90 bp | CAGGAGGAACAGCAGCGTTTCAGATGCCCACTCTCTATCTGTGAGAAACCATGCCGCCTGGAGAGACTCTaGACAAAGGAGCCAGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: QEEQQRFRCPLSICEKPCRLERL*TKEPVQ Trigger: CTGAACTGGCTCCTTTGTCAAGAGTCTCTCCAGGCG...GCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACGCTGCTGTTCCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS GCA 90 bp | CCACCCAGTACACAGCTTAATCACACCCATCAACTGTGGGCTTCCTaGGAACACAGCTGCAACTGGAGCTTGCCTCTTTATCCAGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: PPSTQLNHTHQLWAS*EHSCNWSLPLYPGH Trigger: ATGACCTGGATAAAGAGGCAAGCTCCAGTTGCAGCTGTGTTCGCAGGAAGCCCACAGTTGATGGGTGTGATTAAGCTGTGTACTGGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS-3UTR CAA 90 bp | CAGGAGGAACAGCAGCGTTTCAGATGCCCACTCTCTATCTGTGAGAAACCATGCTGTAAAGTGGCAGGCTaGTCACTGTCCACCCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: QEEQQRFRCPLSICEKPCCKVAG*SLSTQY Trigger: GTACTGGGTGGACAGTGACAAGCCTGCCACTTTACA...GCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACGCTGCTGTTCCTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS CCA 90 bp | TGTCACTGTCCACCCAGTACACAGCTTAATCACACCCATCAACTGTaGGCTTCCTGCGAACACAGCTGCAACTGGAGCTTGCCTCTTTAT | + |
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Preference number: 5 (lower is better) Translates to: CHCPPSTQLNHTHQL*ASCEHSCNWSLPLY Trigger: ATAAAGAGGCAAGCTCCAGTTGCAGCTGTGTTCGCAGGAAGCCCACAGTTGATGGGTGTGATTAAGCTGTGTACTGGGTGGACAGTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS-3UTR CAA 90 bp | TCTCACCATACAGTGAGATCCAGGCCAGTCTGGCACCCTGCTGCAACAAGAACGTCTTTGCTTTTTCCTTaGGCGGGGTTCTACAGATGT | + |
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Preference number: 5 (lower is better) Translates to: SHHTVRSRPVWHPAATRTSLLFP*AGFYRC Trigger: ACATCTGTAGAACCCCGCCAAAGGAAAAAGCAAAGA...CGTTCTTGTTGCAGCAGGGTGCCAGACTGGCCTGGATCTCACTGTATGGTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| CDS-3UTR CAA 90 bp | CAGGAGGAACAGCAGCGTTTCAGATGCCCACTCTCTATCTGTGAGAAACCATGCAGCTGCAACTGGAGCTaGCCTCTTTATCCAGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: QEEQQRFRCPLSICEKPCSCNWS*PLYPGH Trigger: ATGACCTGGATAAAGAGGCAAGCTCCAGTTGCAGCT...GCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACGCTGCTGTTCCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS-3UTR CAA 90 bp | CAGGAGGAACAGCAGCGTTTCAGATGCCCACTCTCTATCTGTGAGAAACCATGCCTTCATTGCTGCCAGTaGCTTGATAGAGAACACTGG | + |
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Preference number: 5 (lower is better) Translates to: QEEQQRFRCPLSICEKPCLHCCQ*LDREHW Trigger: CCAGTGTTCTCTATCAAGCAACTGGCAGCAATGAAG...GCATGGTTTCTCACAGATAGAGAGTGGGCATCTGAAACGCTGCTGTTCCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
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| CDS-3UTR CAA 90 bp | GGAAGAAAGCTGTCAGAAAGACACAGTGGTGGACTGGACGACATCAACACCTCAAGCTGCAACTGGAGCTaGCCTCTTTATCCAGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: GRKLSERHSGGLDDINTSSCNWS*PLYPGH Trigger: ATGACCTGGATAAAGAGGCAAGCTCCAGTTGCAGCT...TGAGGTGTTGATGTCGTCCAGTCCACCACTGTGTCTTTCTGACAGCTTTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS-3UTR CAA 90 bp | TCTTCAAAAGACCGAGATAGTCTCTCACCATACAGTGAGATCCAGGCCAGTCTGCTTCATTGCTGCCAGTaGCTTGATAGAGAACACTGG | + |
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Preference number: 5 (lower is better) Translates to: SSKDRDSLSPYSEIQASLLHCCQ*LDREHW Trigger: CCAGTGTTCTCTATCAAGCAACTGGCAGCAATGAAG...CAGACTGGCCTGGATCTCACTGTATGGTGAGAGACTATCTCGGTCTTTTGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| CDS-3UTR CAA 90 bp | AGGGTTTTACCTATAGTGCTCTGTGTGCTGTCCTGGAACTCACTATGTAGGCCAGAAATGACACATATTTaGGAGCTCTTTCAGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: RVLPIVLCVLSWNSLCRPEMTHI*ELFQEL Trigger: CAGCTCCTGAAAGAGCTCCAAAATATGTGTCATTTC...TGGCCTACATAGTGAGTTCCAGGACAGCACACAGAGCACTATAGGTAAAACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
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| CDS-3UTR CAA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTTGTAAAGTGGCAGGCTaGTCACTGTCCACCCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: DSICTLWKSVRTLRLLATCKVAG*SLSTQY Trigger: GTACTGGGTGGACAGTGACAAGCCTGCCACTTTACA...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS-3UTR CAA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTGTGGTTCCCAGCTCATaGCAGATGGCATCTTCTACA | + |
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Preference number: 5 (lower is better) Translates to: DSICTLWKSVRTLRLLATVVPSS*QMASST Trigger: TGTAGAAGATGCCATCTGCAATGAGCTGGGAACCAC...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS-3UTR CAA 90 bp | ACAGAGTCCATATTACATCCAGAGTCCATATTACATCCCTTATCAAGTAGGTTTGTGGTTCCCAGCTCATaGCAGATGGCATCTTCTACA | + |
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Preference number: 5 (lower is better) Translates to: TESILHPESILHPLSSRFVVPSS*QMASST Trigger: TGTAGAAGATGCCATCTGCAATGAGCTGGGAACCAC...AAACCTACTTGATAAGGGATGTAATATGGACTCTGGATGTAATATGGACTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS-3UTR CAA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTTCTTTGCTTTTTCCTTaGGCGGGGTTCTACAGATGT | + |
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Preference number: 5 (lower is better) Translates to: DSICTLWKSVRTLRLLATSLLFP*AGFYRC Trigger: ACATCTGTAGAACCCCGCCAAAGGAAAAAGCAAAGA...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
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| CDS-3UTR CAA 90 bp | GACTCAATATGTACATTGTGGAAAAGTGTCAGAACACTGAGGTTATTGGCAACTATTGCTGCCAGTTGCTaGATAGAGAACACTGGCAAT | + |
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Preference number: 5 (lower is better) Translates to: DSICTLWKSVRTLRLLATIAASC*IENTGN Trigger: ATTGCCAGTGTTCTCTATCAAGCAACTGGCAGCAAT...AGTTGCCAATAACCTCAGTGTTCTGACACTTTTCCACAATGTACATATTGAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084892.12 |
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| CDS-3UTR CAA 90 bp | TTAATTGTGTGTGTCACAGTATGCACACTTACACATACAGCTGTGCACATAAGAGAAATGACACATATTTaGGAGCTCTTTCAGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LIVCVTVCTLTHTAVHIREMTHI*ELFQEL Trigger: CAGCTCCTGAAAGAGCTCCAAAATATGTGTCATTTC...TCTTATGTGCACAGCTGTATGTGTAAGTGTGCATACTGTGACACACACAATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142005.2 |
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| CDS GCA 72 bp | CACACCCATCAACTGTGGGCTTCCTGCGAACACAGCTaGAACTGGAGCTTGCCTCTTTATCCAGGTCATAAG | + |
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Preference number: 6 (lower is better) Translates to: HTHQLWASCEHS*NWSLPLYPGHK Trigger: CTTATGACCTGGATAAAGAGGCAAGCTCCAGTTGCAGCTGTGTTCGCAGGAAGCCCACAGTTGATGGGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084892.12 ENSMUST00000139385.8 |
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| CDS TCA 72 bp | GAAACAAGACGTAGTGGCTGTACTCCCACACCATCATaGAAGTGTACGTCGAGGTACTCAGCAACAGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: ETRRSGCTPTPS*KCTSRYSATGS Trigger: GCTACCTGTTGCTGAGTACCTCGACGTACACTTTCATGATGGTGTGGGAGTACAGCCACTACGTCTTGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084892.12 ENSMUST00000128024.8 ENSMUST00000139385.8 ENSMUST00000142005.2 |
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| CDS TCA 72 bp | TCTGCGGATCTTCTCTGCTTTGGCTTCCTGACTTCCTaGAGTTCTTTGCTTTTTCCTTTGGCGGGGTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: SADLLCFGFLTS*SSLLFPLAGFY Trigger: GTAGAACCCCGCCAAAGGAAAAAGCAAAGAACTTCAGGAAGTCAGGAAGCCAAAGCAGAGAAGATCCGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084892.12 ENSMUST00000128024.8 ENSMUST00000142005.2 |
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