Pregenerated sensors for DPY19L3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043671Ensembl transcript IDs: ENSMUST00000051377.15, ENSMUST00000143590.2, ENSMUST00000144416.2
Found 249 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACACTGGAACACAGTTTTGGATGCTACTTAAGCAGCAACCACACTaGGGCGCGGCCCGGCGGGGCTCTCCGGCCGGTGTGCTCGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: DTGTQFWMLLKQQPH*GAARRGSPAGVLVG Trigger: CCCCACGAGCACACCGGCCGGAGAGCCCCGCCGGGCCGCGCCGCAGTGTGGTTGCTGCTTAAGTAGCATCCAAAACTGTGTTCCAGTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | TATCAGGAGTGGAAACACAAGGCAGTGGCCGGCCACCTGCGGGACTaGAGCAGGCGGCTCCCAAGAGGGCTGGAGACTCGAGGCTCCGTG | + |
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Preference number: 1 (lower is better) Translates to: YQEWKHKAVAGHLRD*SRRLPRGLETRGSV Trigger: CACGGAGCCTCGAGTCTCCAGCCCTCTTGGGAGCCGCCTGCTGCAGTCCCGCAGGTGGCCGGCCACTGCCTTGTGTTTCCACTCCTGATA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | CCGAGAGCGTCGGGAGCCATTTGTCTGCTTCTGGGAAAGTCGGCCTaGCAGGCAGAGTCAGGGCAGGTCGGCGTCTGCTGGCAGGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: PRASGAICLLLGKSA*QAESGQVGVCWQVS Trigger: GGAAACCTGCCAGCAGACGCCGACCTGCCCTGACTCTGCCTGGCAGGCCGACTTTCCCAGAAGCAGACAAATGGCTCCCGACGCTCTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR CCA 90 bp | ACAGTCCCCAGGGCCCGCACTGCAGAAAGTGAGGGCTACAGGCACTaGCTCCTGCTTGCACAGTGTGGGGGCTGTGGCCAAGGGTGGATC | + |
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Preference number: 1 (lower is better) Translates to: TVPRARTAESEGYRH*LLLAQCGGCGQGWI Trigger: GATCCACCCTTGGCCACAGCCCCCACACTGTGCAAGCAGGAGCCAGTGCCTGTAGCCCTCACTTTCTGCAGTGCGGGCCCTGGGGACTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | TGGCCACATCCAGCAAGTCGCGCAGCCGGCAGCCCCTGTGGTGCCTaGGTTCGTAGCAGATGCTGTCCTCCAGGATCACGAAGTCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: WPHPASRAAGSPCGA*VRSRCCPPGSRSQC Trigger: GCACTGACTTCGTGATCCTGGAGGACAGCATCTGCTACGAACGCAGGCACCACAGGGGCTGCCGGCTGCGCGACTTGCTGGATGTGGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
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| 3UTR GCA 90 bp | AGTCGCGCAGCCGGCAGCCCCTGTGGTGCCTGCGTTCGTAGCAGATaGTGTCCTCCAGGATCACGAAGTCAGTGCCAAAGGACCTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: SRAAGSPCGACVRSR*CPPGSRSQCQRTSA Trigger: TGCTGAGGTCCTTTGGCACTGACTTCGTGATCCTGGAGGACAGCATCTGCTACGAACGCAGGCACCACAGGGGCTGCCGGCTGCGCGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
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| 3UTR CCA 90 bp | TCAAGTCAGGGTCACTCTCTCCTGGCCCATCCATTTCATGTCCGTTaGCCACATCCAGCAAGTCGCGCAGCCGGCAGCCCCTGTGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: SSQGHSLLAHPFHVR*PHPASRAAGSPCGA Trigger: GGCACCACAGGGGCTGCCGGCTGCGCGACTTGCTGGATGTGGCCAACGGACATGAAATGGATGGGCCAGGAGAGAGTGACCCTGACTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
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| 3UTR CCA 90 bp | GAAAGATCTGGTTCCCGAGAGCGTCGGGAGCCATTTGTCTGCTTCTaGGAAAGTCGGCCTGCCAGGCAGAGTCAGGGCAGGTCGGCGTCT | + |
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Preference number: 1 (lower is better) Translates to: ERSGSRERREPFVCF*ESRPARQSQGRSAS Trigger: AGACGCCGACCTGCCCTGACTCTGCCTGGCAGGCCGACTTTCCCAGAAGCAGACAAATGGCTCCCGACGCTCTCGGGAACCAGATCTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR TCA 90 bp | TGGCTGGGCAGGATAGACAGAGGCGGGACCTTTAGGATTCCCGGGTaGGGGACTGAGGGAAAGGAAGGAGATCCGCAATGGCAGGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: WLGRIDRGGTFRIPG*GTEGKEGDPQWQER Trigger: CCTCTCCTGCCATTGCGGATCTCCTTCCTTTCCCTCAGTCCCTCACCCGGGAATCCTAAAGGTCCCGCCTCTGTCTATCCTGCCCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | TTTGCTGAAAGATCTGGTTCCCGAGAGCGTCGGGAGCCATTTGTCTaGTTCTGGGAAAGTCGGCCTGCCAGGCAGAGTCAGGGCAGGTCG | + |
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Preference number: 1 (lower is better) Translates to: FAERSGSRERREPFV*FWESRPARQSQGRS Trigger: CGACCTGCCCTGACTCTGCCTGGCAGGCCGACTTTCCCAGAAGCAGACAAATGGCTCCCGACGCTCTCGGGAACCAGATCTTTCAGCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | GCCTGCGTTCGTAGCAGATGCTGTCCTCCAGGATCACGAAGTCAGTaGCAAAGGACCTCAGCAGTGCGTGCACTTCCTCTGGCGACCTCT | + |
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Preference number: 1 (lower is better) Translates to: ACVRSRCCPPGSRSQ*QRTSAVRALPLATS Trigger: AGAGGTCGCCAGAGGAAGTGCACGCACTGCTGAGGTCCTTTGGCACTGACTTCGTGATCCTGGAGGACAGCATCTGCTACGAACGCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
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| 3UTR CCA 90 bp | TCCTCACTCCCTCCTCAGAGGACTGTTCCACTTCCCACCGGCAGGTaGCGCTCAAACAGGGACGCTCTGAGAGTTTGGGGATCAAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: SSLPPQRTVPLPTGR*RSNRDALRVWGSSG Trigger: ACCACTTGATCCCCAAACTCTCAGAGCGTCCCTGTTTGAGCGCCACCTGCCGGTGGGAAGTGGAACAGTCCTCTGAGGAGGGAGTGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR CCA 90 bp | GAAGCGAGGGTGGTCTGCAGGTCTCAAGTCAGGGTCACTCTCTCCTaGCCCATCCATTTCATGTCCGTTGGCCACATCCAGCAAGTCGCG | + |
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Preference number: 1 (lower is better) Translates to: EARVVCRSQVRVTLS*PIHFMSVGHIQQVA Trigger: CGCGACTTGCTGGATGTGGCCAACGGACATGAAATGGATGGGCCAGGAGAGAGTGACCCTGACTTGAGACCTGCAGACCACCCTCGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
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| 3UTR CCA 90 bp | GGGAACCCAGAACATTTGGGGCAGGCATTGAGGAGGCACCGCCGCTaGGATCAAAAATGGGTTACAGGGAAGCAGCACCCATCCAGGATG | + |
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Preference number: 1 (lower is better) Translates to: GNPEHLGQALRRHRR*DQKWVTGKQHPSRM Trigger: CATCCTGGATGGGTGCTGCTTCCCTGTAACCCATTTTTGATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTCTGGGTTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR CCA 90 bp | CACGAAGTCAGTGCCAAAGGACCTCAGCAGTGCGTGCACTTCCTCTaGCGACCTCTTCGCATAGATCTGATAAACCGCCTGGGTCCGCTC | + |
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Preference number: 1 (lower is better) Translates to: HEVSAKGPQQCVHFL*RPLRIDLINRLGPL Trigger: GAGCGGACCCAGGCGGTTTATCAGATCTATGCGAAGAGGTCGCCAGAGGAAGTGCACGCACTGCTGAGGTCCTTTGGCACTGACTTCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
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| 3UTR GCA 90 bp | GCTGGGATCAAAAATGGGTTACAGGGAAGCAGCACCCATCCAGGATaGTCTGGCAAAGCCAAGGTGCCTGCTCTTGCAGTCTGGCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: AGIKNGLQGSSTHPG*SGKAKVPALAVWPL Trigger: CAGAGGCCAGACTGCAAGAGCAGGCACCTTGGCTTTGCCAGAGCATCCTGGATGGGTGCTGCTTCCCTGTAACCCATTTTTGATCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | CTTGCAGTCTGGCCTCTGAATACTGAAGCAGTGTCTGAGCCACCATaGCCGGAGGAGGAGACGATGATAACGACTGAGCAGCTGGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: LAVWPLNTEAVSEPP*PEEETMITTEQLEE Trigger: CTCTTCCAGCTGCTCAGTCGTTATCATCGTCTCCTCCTCCGGGCATGGTGGCTCAGACACTGCTTCAGTATTCAGAGGCCAGACTGCAAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | CAGGGAGAGGGAGGGGGAGAGAAAGAGAGCGAGCGCGAGAGAGCATaGGTAACAGAACAGGACTTATTAGCAGAGATCTCTACCTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: QGEGGGEKESERERA*VTEQDLLAEISTSS Trigger: GGAGGAGGTAGAGATCTCTGCTAATAAGTCCTGTTCTGTTACGCATGCTCTCTCGCGCTCGCTCTCTTTCTCTCCCCCTCCCTCTCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR TCA 90 bp | GAAGCTGGACTGGACCCTCCTTCTGAGGTGGAGTTGCAGCACTGGTaGGAAAGCCATCTGACCCTGAAAGAGGCTACCAGAAGAAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: EAGLDPPSEVELQHW*ESHLTLKEATRRRA Trigger: AGCTCTTCTTCTGGTAGCCTCTTTCAGGGTCAGATGGCTTTCTCACCAGTGCTGCAACTCCACCTCAGAAGGAGGGTCCAGTCCAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR TCA 90 bp | GTGCCTGTCTTTCATTTGGGAACCCAGAACATTTGGGGCAGGCATTaGGGAGGCACCGCCGCTGGGATCAAAAATGGGTTACAGGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: VPVFHLGTQNIWGRH*GGTAAGIKNGLQGS Trigger: GCTTCCCTGTAACCCATTTTTGATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTCTGGGTTCCCAAATGAAAGACAGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | GCTGTCCTCCAGGATCACGAAGTCAGTGCCAAAGGACCTCAGCAGTaGGTGCACTTCCTCTGGCGACCTCTTCGCATAGATCTGATAAAC | + |
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Preference number: 1 (lower is better) Translates to: AVLQDHEVSAKGPQQ*VHFLWRPLRIDLIN Trigger: GTTTATCAGATCTATGCGAAGAGGTCGCCAGAGGAAGTGCACGCACTGCTGAGGTCCTTTGGCACTGACTTCGTGATCCTGGAGGACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
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| 3UTR CCA 90 bp | GATCAAAAATGGGTTACAGGGAAGCAGCACCCATCCAGGATGCTCTaGCAAAGCCAAGGTGCCTGCTCTTGCAGTCTGGCCTCTGAATAC | + |
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Preference number: 1 (lower is better) Translates to: DQKWVTGKQHPSRML*QSQGACSCSLASEY Trigger: GTATTCAGAGGCCAGACTGCAAGAGCAGGCACCTTGGCTTTGCCAGAGCATCCTGGATGGGTGCTGCTTCCCTGTAACCCATTTTTGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR TCA 90 bp | AACTCAGAAGCAGAGCCTCGAGCTTGTTCTATCCAGAGTCACAGCTaGACACTATTACCAACAGTCCCCAGGGCCCGCACTGCAGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: NSEAEPRACSIQSHS*TLLPTVPRARTAES Trigger: ACTTTCTGCAGTGCGGGCCCTGGGGACTGTTGGTAATAGTGTTCAGCTGTGACTCTGGATAGAACAAGCTCGAGGCTCTGCTTCTGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR CCA 90 bp | CCTTGTAGGGAGGGACACGATGTCTCCAGGGCTGAGAAGGAAGACTaGAGGCCAGAAGTCAAAGAGCATGAAATGCCACATAGAACTCTA | + |
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Preference number: 1 (lower is better) Translates to: PCREGHDVSRAEKED*RPEVKEHEMPHRTL Trigger: TAGAGTTCTATGTGGCATTTCATGCTCTTTGACTTCTGGCCTCCAGTCTTCCTTCTCAGCCCTGGAGACATCGTGTCCCTCCCTACAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR CCA 90 bp | GGCAAACATTATACTCTCAAGCCACACCCTTGGCCCTTTTGTGGTTaGGGCTCTAAACTCACAATCAGCAGCAGAAGGTGCACCCAGACA | + |
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Preference number: 1 (lower is better) Translates to: GKHYTLKPHPWPFCG*GSKLTISSRRCTQT Trigger: TGTCTGGGTGCACCTTCTGCTGCTGATTGTGAGTTTAGAGCCCCAACCACAAAAGGGCCAAGGGTGTGGCTTGAGAGTATAATGTTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR TCA 90 bp | GCTGGGATTAAAAGAGTGTGTCACCATGCCGGCCCAGTAGCACCCTaGCTGCTGTGCCCAGAATCAAAACAAACACACACTCTAAATGTG | + |
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Preference number: 1 (lower is better) Translates to: AGIKRVCHHAGPVAP*LLCPESKQTHTLNV Trigger: CACATTTAGAGTGTGTGTTTGTTTTGATTCTGGGCACAGCAGTCAGGGTGCTACTGGGCCGGCATGGTGACACACTCTTTTAATCCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | ATGCTCTTTGTAAGGTTTTCCCCAACAGATGCCACAAACAGGCAATaGCCCTACCTGATAACAGACCAGCTCTCTACCTCTCTGAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: MLFVRFSPTDATNRQ*PYLITDQLSTSLSH Trigger: GTGGCTCAGAGAGGTAGAGAGCTGGTCTGTTATCAGGTAGGGGCATTGCCTGTTTGTGGCATCTGTTGGGGAAAACCTTACAAAGAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | GAAATGGAAACGGCCCTATGCTTTCTATACAAATGCTTAAGAAACTaGTCCACACTCGTGGGGCTAAAGAAGGGCAACGGCAACCACCTG | + |
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Preference number: 1 (lower is better) Translates to: EMETALCFLYKCLRN*STLVGLKKGNGNHL Trigger: CAGGTGGTTGCCGTTGCCCTTCTTTAGCCCCACGAGTGTGGAGCAGTTTCTTAAGCATTTGTATAGAAAGCATAGGGCCGTTTCCATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | AAGGGATTCCCCTCAAAGACTTCTATTATAAGCCCTGACACACTTTaGTTTCTTGAGACAGGGTCTCTTTACATAGCCCTGGCTGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: KGFPSKTSIISPDTL*FLETGSLYIALAGP Trigger: TGGGCCAGCCAGGGCTATGTAAAGAGACCCTGTCTCAAGAAAGCAAAGTGTGTCAGGGCTTATAATAGAAGTCTTTGAGGGGAATCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR CCA 90 bp | TCAGTGACTGAACTGTGCGGCCTGTCAACTACACTCACTCACAGCTaGCTCAGGGTCACTGAAAATCACAAGTATTTCAGATCTCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SVTELCGLSTTLTHS*LRVTENHKYFRSQR Trigger: TCTTTGAGATCTGAAATACTTGTGATTTTCAGTGACCCTGAGCCAGCTGTGAGTGAGTGTAGTTGACAGGCCGCACAGTTCAGTCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | AATGCTTTTACTTTGCTGTCTGTGCAAGTGCAGAAATTACAGGCTTaGCAAGCTCAAGGGGAAATCTTGGGACCATCAGAGTGGATTCCT | + |
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Preference number: 1 (lower is better) Translates to: NAFTLLSVQVQKLQA*QAQGEILGPSEWIP Trigger: AGGAATCCACTCTGATGGTCCCAAGATTTCCCCTTGAGCTTGGCAAGCCTGTAATTTCTGCACTTGCACAGACAGCAAAGTAAAAGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | AAACAAAAATGGGAAATGGAAACGGCCCTATGCTTTCTATACAAATaGTTAAGAAACTGCTCCACACTCGTGGGGCTAAAGAAGGGCAAC | + |
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Preference number: 1 (lower is better) Translates to: KQKWEMETALCFLYK*LRNCSTLVGLKKGN Trigger: GTTGCCCTTCTTTAGCCCCACGAGTGTGGAGCAGTTTCTTAAGCATTTGTATAGAAAGCATAGGGCCGTTTCCATTTCCCATTTTTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | ATGAACAGCACCAGTGCCTGCAGCAGCATCATGAACTGGTTAAATTaGCATGTCAGGCTAAAGAGAAAAGTTGATACGAAAATGGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: MNSTSACSSIMNWLN*HVRLKRKVDTKMAR Trigger: TCTTGCCATTTTCGTATCAACTTTTCTCTTTAGCCTGACATGGCAATTTAACCAGTTCATGATGCTGCTGCAGGCACTGGTGCTGTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
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| 3UTR GCA 90 bp | GCTGAGACCCAAGCTATACAAGTGATATACACACTGAACCATCTCTaGAGACATGATCAAGTTAAATTTAAAAGCAATTTTGATGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: AETQAIQVIYTLNHL*RHDQVKFKSNFDEQ Trigger: TTGCTCATCAAAATTGCTTTTAAATTTAACTTGATCATGTCTGCAGAGATGGTTCAGTGTGTATATCACTTGTATAGCTTGGGTCTCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 90 bp | AAAGTTAATTTCATTAGCTCTCTTGATTTAATTAAGTGGACAATGTaGCTGTATCAGCAGCTTTTACATGCCCCCACCATTAGAAATGAA | + |
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Preference number: 1 (lower is better) Translates to: KVNFISSLDLIKWTM*LYQQLLHAPTIRNE Trigger: TTCATTTCTAATGGTGGGGGCATGTAAAAGCTGCTGATACAGGCACATTGTCCACTTAATTAAATCAAGAGAGCTAATGAAATTAACTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | TACAGGCACTGGCTCCTGCTTGCACAGTGTGGGGGCTGTGGCCAAGGGTGGATCAAGCAGCAACCACACTaGGGCGCGGCCCGGCGGGGC | + |
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Preference number: 2 (lower is better) Translates to: YRHWLLLAQCGGCGQGWIKQQPH*GAARRG Trigger: GCCCCGCCGGGCCGCGCCGCAGTGTGGTTGCTGCTT...GATCCACCCTTGGCCACAGCCCCCACACTGTGCAAGCAGGAGCCAGTGCCTGTA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | TACAGGCACTGGCTCCTGCTTGCACAGTGTGGGGGCTGTGGCCAAGGGTGGATCGGAGGGAAGCTGCCGTaGCTGAGAGGGTGCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: YRHWLLLAQCGGCGQGWIGGKLP*LRGCRA Trigger: TGCCCTGCACCCTCTCAGGCACGGCAGCTTCCCTCC...GATCCACCCTTGGCCACAGCCCCCACACTGTGCAAGCAGGAGCCAGTGCCTGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | TACAGGCACTGGCTCCTGCTTGCACAGTGTGGGGGCTGTGGCCAAGGGTGGATCCTGGGAAAGTCGGCCTaGCAGGCAGAGTCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: YRHWLLLAQCGGCGQGWILGKSA*QAESGQ Trigger: CTGCCCTGACTCTGCCTGGCAGGCCGACTTTCCCAG...GATCCACCCTTGGCCACAGCCCCCACACTGTGCAAGCAGGAGCCAGTGCCTGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | GCGCAGCCGGCAGCCCCTGTGGTGCCTGCGTTCGTAGCAGATGCTGTCCTCCAGCAGCCAGCAACTGCATaGTTCCAGCGAACACAGCCT | + |
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Preference number: 2 (lower is better) Translates to: AQPAAPVVPAFVADAVLQQPATA*FQRTQP Trigger: AGGCTGTGTTCGCTGGAAGCATGCAGTTGCTGGCTG...CTGGAGGACAGCATCTGCTACGAACGCAGGCACCACAGGGGCTGCCGGCTGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
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| 3UTR CAA 90 bp | GGGCCCGCACTGCAGAAAGTGAGGGCTACAGGCACTGGCTCCTGCTaGCACAGTGTGGGGGCTGTGGCCAAGGGTGGATCTGTTTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: GPALQKVRATGTGSC*HSVGAVAKGGSVFL Trigger: GAGGAAAACAGATCCACCCTTGGCCACAGCCCCCACACTGTGCAAGCAGGAGCCAGTGCCTGTAGCCCTCACTTTCTGCAGTGCGGGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR CAA 90 bp | CTCAAGTCAGGGTCACTCTCTCCTGGCCCATCCATTTCATGTCCGTaGGCCACATCCAGCAAGTCGCGCAGCCGGCAGCCCCTGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LKSGSLSPGPSISCP*ATSSKSRSRQPLWC Trigger: GCACCACAGGGGCTGCCGGCTGCGCGACTTGCTGGATGTGGCCAACGGACATGAAATGGATGGGCCAGGAGAGAGTGACCCTGACTTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGTCCCTTGGAGCCAGAGCTATAGGCAGTTGTGAGCTGACAGACGTGGGTGGAAGCTGCCGTGCCTaGGAGGGTGCAGGGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: GGSLGARAIGSCELTDVGGSCRA*EGAGQR Trigger: TCTCTGCCCTGCACCCTCTCAGGCACGGCAGCTTCC...ACCCACGTCTGTCAGCTCACAACTGCCTATAGCTCTGGCTCCAAGGGACCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGTCCCTTGGAGCCAGAGCTATAGGCAGTTGTGAGCTGACAGACGTGGGTCCGTGCCTGAGAGGGTaGAGGGCAGAGAGCATAGCG | + |
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Preference number: 2 (lower is better) Translates to: GGSLGARAIGSCELTDVGPCLRG*RAESIA Trigger: CGCTATGCTCTCTGCCCTGCACCCTCTCAGGCACGG...ACCCACGTCTGTCAGCTCACAACTGCCTATAGCTCTGGCTCCAAGGGACCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGTCCCTTGGAGCCAGAGCTATAGGCAGTTGTGAGCTGACAGACGTGGGTCCGCACTGCAGAAAGTaGGGGCTACAGGCACTGGCT | + |
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Preference number: 2 (lower is better) Translates to: GGSLGARAIGSCELTDVGPHCRK*GLQALA Trigger: AGCCAGTGCCTGTAGCCCTCACTTTCTGCAGTGCGG...ACCCACGTCTGTCAGCTCACAACTGCCTATAGCTCTGGCTCCAAGGGACCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGTCCCTTGGAGCCAGAGCTATAGGCAGTTGTGAGCTGACAGACGTGGGTGTTCCTAGCCAGCCTTaGGCAGGCACACCTGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GGSLGARAIGSCELTDVGVPSQP*AGTPVR Trigger: CCTCACAGGTGTGCCTGCCCAAGGCTGGCTAGGAAC...ACCCACGTCTGTCAGCTCACAACTGCCTATAGCTCTGGCTCCAAGGGACCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | TACAGGCACTGGCTCCTGCTTGCACAGTGTGGGGGCTGTGGCCAAGGGTGGATCCTTCTGAGGTGGAGTTaGAGCACTGGTGAGAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: YRHWLLLAQCGGCGQGWILLRWS*STGEKA Trigger: GGCTTTCTCACCAGTGCTGCAACTCCACCTCAGAAG...GATCCACCCTTGGCCACAGCCCCCACACTGTGCAAGCAGGAGCCAGTGCCTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | TACAGGCACTGGCTCCTGCTTGCACAGTGTGGGGGCTGTGGCCAAGGGTGGATCCGGCCCTATGAGGGTTaGCTTACAGCAGCAAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: YRHWLLLAQCGGCGQGWIRPYEG*LTAAKM Trigger: CATCTTTGCTGCTGTAAGGCAACCCTCATAGGGCCG...GATCCACCCTTGGCCACAGCCCCCACACTGTGCAAGCAGGAGCCAGTGCCTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGAACCCAGAACATTTGGGGCAGGCATTGAGGAGGCACCGCCGCTGGGATGAGTTGCAGCACTGGTaGGAAAGCCATCTGACCCTG | + |
|
Preference number: 2 (lower is better) Translates to: FGNPEHLGQALRRHRRWDELQHW*ESHLTL Trigger: CAGGGTCAGATGGCTTTCTCACCAGTGCTGCAACTC...ATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTCTGGGTTCCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGAACCCAGAACATTTGGGGCAGGCATTGAGGAGGCACCGCCGCTGGGATTCCCAGGCCACCCAGTaGGTCACACATAATTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: FGNPEHLGQALRRHRRWDSQATQ*VTHNSL Trigger: GAGGGAATTATGTGTGACCCACTGGGTGGCCTGGGA...ATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTCTGGGTTCCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTGAGGATAGCTTGGGCTACAAAGCCAGATATGGGGGAGGGGAGGGAGGACCTGCTTGCACAGTGTaGGGGCTGTGGCCAAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KFEDSLGYKARYGGGEGGPACTV*GLWPRV Trigger: CACCCTTGGCCACAGCCCCCACACTGTGCAAGCAGG...TCCTCCCTCCCCTCCCCCATATCTGGCTTTGTAGCCCAAGCTATCCTCAAACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTGAGGATAGCTTGGGCTACAAAGCCAGATATGGGGGAGGGGAGGGAGGACGATGTCTCCAGGGCTaGGAAGGAAGACTGGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: KFEDSLGYKARYGGGEGGRCLQG*EGRLEA Trigger: GGCCTCCAGTCTTCCTTCTCAGCCCTGGAGACATCG...TCCTCCCTCCCCTCCCCCATATCTGGCTTTGTAGCCCAAGCTATCCTCAAACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGTCCCTTGGAGCCAGAGCTATAGGCAGTTGTGAGCTGACAGACGTGGGTGACGATGATAACGACTaGGCAGCTGGAAGAGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: GGSLGARAIGSCELTDVGDDDND*AAGRGS Trigger: GCTTCCTCTTCCAGCTGCTCAGTCGTTATCATCGTC...ACCCACGTCTGTCAGCTCACAACTGCCTATAGCTCTGGCTCCAAGGGACCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | GTCACTCTCTCCTGGCCCATCCATTTCATGTCCGTTGGCCACATCCAGCAAGTCAGCCCCTGTGGTGCCTaGGTTCGTAGCAGATGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: VTLSWPIHFMSVGHIQQVSPCGA*VRSRCC Trigger: ACAGCATCTGCTACGAACGCAGGCACCACAGGGGCT...GACTTGCTGGATGTGGCCAACGGACATGAAATGGATGGGCCAGGAGAGAGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
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| 3UTR-3UTR CCA 90 bp | TACAGGCACTGGCTCCTGCTTGCACAGTGTGGGGGCTGTGGCCAAGGGTGGATCAATATCAGAGGGAGGTaGATGAGCCATGTGGAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: YRHWLLLAQCGGCGQGWINIRGR*MSHVEL Trigger: AAGCTCCACATGGCTCATCCACCTCCCTCTGATATT...GATCCACCCTTGGCCACAGCCCCCACACTGTGCAAGCAGGAGCCAGTGCCTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR TCA 90 bp | AGGTGGCGCTCAAACAGGGACGCTCTGAGAGTTTGGGGATCAAGTGGTGGACACTTTAGGATTCCCGGGTaGGGGACTGAGGGAAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RWRSNRDALRVWGSSGGHFRIPG*GTEGKE Trigger: TTCCTTTCCCTCAGTCCCTCACCCGGGAATCCTAAA...GTGTCCACCACTTGATCCCCAAACTCTCAGAGCGTCCCTGTTTGAGCGCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGGTACACCACCTCTCTCTGCTGCGTGGTGGCACTTGGTCACCTTGTAGGAGATTCACCTGCCCCTaGCTTCAAGTGCTGGGATTA | + |
|
Preference number: 2 (lower is better) Translates to: EQVHHLSLLRGGTWSPCRRFTCP*LQVLGL Trigger: TAATCCCAGCACTTGAAGGCAGGGGCAGGTGAATCT...CCTACAAGGTGACCAAGTGCCACCACGCAGCAGAGAGAGGTGGTGTACCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | ACCGGGCCCCAGTGCTCTGTGCCATCCCTGTGCTTGCTTTCCCTTAAGGGTAAGGCTGAGAAGGAAGACTaGAGGCCAGAAGTCAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TGPQCSVPSLCLLSLKGKAEKED*RPEVKE Trigger: CTCTTTGACTTCTGGCCTCCAGTCTTCCTTCTCAGC...CTTACCCTTAAGGGAAAGCAAGCACAGGGATGGCACAGAGCACTGGGGCCCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGTCCCTTGGAGCCAGAGCTATAGGCAGTTGTGAGCTGACAGACGTGGGTCCTGCTCTTGCAGTCTaGCCTCTGAATACTGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GGSLGARAIGSCELTDVGPALAV*PLNTEA Trigger: TGCTTCAGTATTCAGAGGCCAGACTGCAAGAGCAGG...ACCCACGTCTGTCAGCTCACAACTGCCTATAGCTCTGGCTCCAAGGGACCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTGAGGATAGCTTGGGCTACAAAGCCAGATATGGGGGAGGGGAGGGAGGACTCAAGCCACACCCTTaGCCCTTTTGTGGTTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: KFEDSLGYKARYGGGEGGLKPHP*PFCGWG Trigger: GCCCCAACCACAAAAGGGCCAAGGGTGTGGCTTGAG...TCCTCCCTCCCCTCCCCCATATCTGGCTTTGTAGCCCAAGCTATCCTCAAACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTGAGGATAGCTTGGGCTACAAAGCCAGATATGGGGGAGGGGAGGGAGGAACAGTGTGGGGGCTGTaGCCAAGGGTGGATCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: KFEDSLGYKARYGGGEGGTVWGL*PRVDLF Trigger: AAACAGATCCACCCTTGGCCACAGCCCCCACACTGT...TCCTCCCTCCCCTCCCCCATATCTGGCTTTGTAGCCCAAGCTATCCTCAAACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTCTCAAGTCAGGGTCACTCTCTCCTGGCCCATCCATTTCATGTCCGTTGTGCGTGCACTTCCTCTaGCGACCTCTTCGCATAGAT | + |
|
Preference number: 2 (lower is better) Translates to: AGLKSGSLSPGPSISCPLCVHFL*RPLRID Trigger: ATCTATGCGAAGAGGTCGCCAGAGGAAGTGCACGCA...CAACGGACATGAAATGGATGGGCCAGGAGAGAGTGACCCTGACTTGAGACCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
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| 3UTR CAA 90 bp | TGTGCCTGTCTTTCATTTGGGAACCCAGAACATTTGGGGCAGGCATaGAGGAGGCACCGCCGCTGGGATCAAAAATGGGTTACAGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: CACLSFGNPEHLGQA*RRHRRWDQKWVTGK Trigger: CTTCCCTGTAACCCATTTTTGATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTCTGGGTTCCCAAATGAAAGACAGGCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTGAGGATAGCTTGGGCTACAAAGCCAGATATGGGGGAGGGGAGGGAGGAGCAACGGCAACCACCTaGCTTCTTAGCTTTTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: KFEDSLGYKARYGGGEGGATATT*LLSFCG Trigger: CCCACAAAAGCTAAGAAGTCAGGTGGTTGCCGTTGC...TCCTCCCTCCCCTCCCCCATATCTGGCTTTGTAGCCCAAGCTATCCTCAAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGGGAGGCTTCCTGATGGGAACAAACCTAGCATATGACCTTGTTTCCCACGTTTGGCAGCAATGGTaGGGTGGAGACGGAGCACTA | + |
|
Preference number: 2 (lower is better) Translates to: EQGGFLMGTNLAYDLVSHVWQQW*GGDGAL Trigger: TAGTGCTCCGTCTCCACCGCACCATTGCTGCCAAAC...GTGGGAAACAAGGTCATATGCTAGGTTTGTTCCCATCAGGAAGCCTCCCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGTCCCTTGGAGCCAGAGCTATAGGCAGTTGTGAGCTGACAGACGTGGGTGCCACTTATTGCCTCTaGAGAACTCAAGATTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GGSLGARAIGSCELTDVGATYCL*RTQDSF Trigger: AAAGGAATCTTGAGTTCTTCAGAGGCAATAAGTGGC...ACCCACGTCTGTCAGCTCACAACTGCCTATAGCTCTGGCTCCAAGGGACCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGTCCCTTGGAGCCAGAGCTATAGGCAGTTGTGAGCTGACAGACGTGGGTAACAGCCTCAGACTTTaGAAGTTTCTAGGCTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GGSLGARAIGSCELTDVGNSLRL*KFLGSE Trigger: TTCAGAGCCTAGAAACTTGCAAAGTCTGAGGCTGTT...ACCCACGTCTGTCAGCTCACAACTGCCTATAGCTCTGGCTCCAAGGGACCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | AACATTATACTCTCAAGCCACACCCTTGGCCCTTTTGTGGTTGGGGCTCTAAACGGCCCCAGTGCTCTGTaGCATCCCTGTGCTTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: NIILSSHTLGPFVVGALNGPSAL*HPCACF Trigger: AAAGCAAGCACAGGGATGGCACAGAGCACTGGGGCC...GTTTAGAGCCCCAACCACAAAAGGGCCAAGGGTGTGGCTTGAGAGTATAATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | TTTGGGAACCCAGAACATTTGGGGCAGGCATTGAGGAGGCACCGCCGCTGGGATATTAAAAACTGCTTGTaGACAGTATGGGCACAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: FGNPEHLGQALRRHRRWDIKNCL*TVWAQS Trigger: GGACTGTGCCCATACTGTGCACAAGCAGTTTTTAAT...ATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTCTGGGTTCCCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | AGCACTTCTGTTGTACTTGGAGGTTCTTCTGGGAACTCAGAAGCAGAGCCTCGAGTTTCCGGCAGCCAATaGCTGGGCAGGATAGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: STSVVLGGSSGNSEAEPRVSGSQ*LGRIDR Trigger: TCTGTCTATCCTGCCCAGCCATTGGCTGCCGGAAAC...TCGAGGCTCTGCTTCTGAGTTCCCAGAAGAACCTCCAAGTACAACAGAAGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR CAA 90 bp | AAACATAAAGGCTGTGCCTGTCTTTCATTTGGGAACCCAGAACATTaGGGGCAGGCATTGAGGAGGCACCGCCGCTGGGATCAAAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: KHKGCACLSFGNPEH*GQALRRHRRWDQKW Trigger: CCATTTTTGATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTCTGGGTTCCCAAATGAAAGACAGGCACAGCCTTTATGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTGAGGATAGCTTGGGCTACAAAGCCAGATATGGGGGAGGGGAGGGAGGATCTAACTCCTGTCTCTaGGTCTTCTTTCCGGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: KFEDSLGYKARYGGGEGGSNSCL*VFFPAF Trigger: GAAAGCCGGAAAGAAGACTCAGAGACAGGAGTTAGA...TCCTCCCTCCCCTCCCCCATATCTGGCTTTGTAGCCCAAGCTATCCTCAAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | TCTGTATCCCGTACAGCCAGGTGGCCTTCATGGCCGGCAGCATGTCCAGGGAGTATGAACTGGTTAAATTaGCATGTCAGGCTAAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SVSRTARWPSWPAACPGSMNWLN*HVRLKR Trigger: TCTCTTTAGCCTGACATGGCAATTTAACCAGTTCAT...ACTCCCTGGACATGCTGCCGGCCATGAAGGCCACCTGGCTGTACGGGATACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTGAGGATAGCTTGGGCTACAAAGCCAGATATGGGGGAGGGGAGGGAGGAGGGATTGGTAACAACTaGCAAGGGTGTGCTTGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: KFEDSLGYKARYGGGEGGGIGNN*QGCACL Trigger: CAAACAAGCACACCCTTGCCAGTTGTTACCAATCCC...TCCTCCCTCCCCTCCCCCATATCTGGCTTTGTAGCCCAAGCTATCCTCAAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | CAACGATCCCAGAATCATGGAGTTAAAGAACTGAAGCGTGCAGACGAGGAGCAGGATGAACAGCACCAGTaGCTGCAGCAGCATCATGAA | + |
|
Preference number: 2 (lower is better) Translates to: QRSQNHGVKELKRADEEQDEQHQ*LQQHHE Trigger: TTCATGATGCTGCTGCAGGCACTGGTGCTGTTCATC...CTGCTCCTCGTCTGCACGCTTCAGTTCTTTAACTCCATGATTCTGGGATCGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACTTCTGTTGTACTTGGAGGTTCTTCTGGGAACTCAGAAGCAGAGCCTCGAGCCTGTGGGGAAGACTaGTTTTTGGCACTTCTCATC | + |
|
Preference number: 2 (lower is better) Translates to: STSVVLGGSSGNSEAEPRACGED*FLALLI Trigger: GATGAGAAGTGCCAAAAACCAGTCTTCCCCACAGGC...TCGAGGCTCTGCTTCTGAGTTCCCAGAAGAACCTCCAAGTACAACAGAAGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | AGCACTTCTGTTGTACTTGGAGGTTCTTCTGGGAACTCAGAAGCAGAGCCTCGATGCTTGTGCACAGTATaGGCACAGTCCCATTTACGC | + |
|
Preference number: 2 (lower is better) Translates to: STSVVLGGSSGNSEAEPRCLCTV*AQSHLR Trigger: GCGTAAATGGGACTGTGCCCATACTGTGCACAAGCA...TCGAGGCTCTGCTTCTGAGTTCCCAGAAGAACCTCCAAGTACAACAGAAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | TGCAACAGTAGTTTCCAAATTCTAGTCAGGAAGGATCCAGTCTTCAGGTTTTTCTCCCGTACAGCCAGGTaGCCTTCATGGCCGGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: CNSSFQILVRKDPVFRFFSRTAR*PSWPAA Trigger: TGCTGCCGGCCATGAAGGCCACCTGGCTGTACGGGA...GAAAAACCTGAAGACTGGATCCTTCCTGACTAGAATTTGGAAACTACTGTTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGTCCCTTGGAGCCAGAGCTATAGGCAGTTGTGAGCTGACAGACGTGGGTTGCTTTCTATACAAATaGTTAAGAAACTGCTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: GGSLGARAIGSCELTDVGCFLYK*LRNCST Trigger: TGTGGAGCAGTTTCTTAAGCATTTGTATAGAAAGCA...ACCCACGTCTGTCAGCTCACAACTGCCTATAGCTCTGGCTCCAAGGGACCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | AGCACTTCTGTTGTACTTGGAGGTTCTTCTGGGAACTCAGAAGCAGAGCCTCGAGACGTGGTAGTGATCTaGAGCCTTCCCAATTCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: STSVVLGGSSGNSEAEPRDVVVI*SLPNSN Trigger: GTTAGAATTGGGAAGGCTGCAGATCACTACCACGTC...TCGAGGCTCTGCTTCTGAGTTCCCAGAAGAACCTCCAAGTACAACAGAAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | AGCACTTCTGTTGTACTTGGAGGTTCTTCTGGGAACTCAGAAGCAGAGCCTCGAGCAGCAGAGAAAGTCTaGGATACGCTACCTTCTACA | + |
|
Preference number: 2 (lower is better) Translates to: STSVVLGGSSGNSEAEPRAAEKV*DTLPST Trigger: TGTAGAAGGTAGCGTATCCCAGACTTTCTCTGCTGC...TCGAGGCTCTGCTTCTGAGTTCCCAGAAGAACCTCCAAGTACAACAGAAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | AGCATGCGTAACAGAACAGGACTTATTAGCAGAGATCTCTACCTCCTCCAATTTCCATCCAGGATGCTCTaGCAAAGCCAAGGTGCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SMRNRTGLISRDLYLLQFPSRML*QSQGAC Trigger: GCAGGCACCTTGGCTTTGCCAGAGCATCCTGGATGG...AAATTGGAGGAGGTAGAGATCTCTGCTAATAAGTCCTGTTCTGTTACGCATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR CCA 90 bp | AATACTGAAAGGTTAAAACTGATGAGCAACGATCCCAGAATCATGGAGTTAAAGGCCAGGTGGCCTTCATaGCCGGCAGCATGTCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: NTERLKLMSNDPRIMELKARWPS*PAACPG Trigger: CCCTGGACATGCTGCCGGCCATGAAGGCCACCTGGC...CTTTAACTCCATGATTCTGGGATCGTTGCTCATCAGTTTTAACCTTTCAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
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| 3UTR CAA 90 bp | CTCAGCAGTTACAGTTTGATGCAGCTGTTTATGCACAGGTTAATGTaGCAGCAGAGAAAGTCTGGGATACGCTACCTTCTACAGGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LSSYSLMQLFMHRLM*QQRKSGIRYLLQGG Trigger: GCCTCCCTGTAGAAGGTAGCGTATCCCAGACTTTCTCTGCTGCAACATTAACCTGTGCATAAACAGCTGCATCAAACTGTAACTGCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGGGAGGCTTCCTGATGGGAACAAACCTAGCATATGACCTTGTTTCCCACTCAGCAGTTACAGTTTaGTGCAGCTGTTTATGCACA | + |
|
Preference number: 2 (lower is better) Translates to: EQGGFLMGTNLAYDLVSHSAVTV*CSCLCT Trigger: TGTGCATAAACAGCTGCATCAAACTGTAACTGCTGA...GTGGGAAACAAGGTCATATGCTAGGTTTGTTCCCATCAGGAAGCCTCCCTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR TCA 90 bp | AACATTATACTCTCAAGCCACACCCTTGGCCCTTTTGTGGTTGGGGCTCTAAACAGTGGATTCCTAAGCTaGGAGCCAGTAAAACCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: NIILSSHTLGPFVVGALNSGFLS*EPVKPH Trigger: ATGGGGTTTTACTGGCTCTCAGCTTAGGAATCCACT...GTTTAGAGCCCCAACCACAAAAGGGCCAAGGGTGTGGCTTGAGAGTATAATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR GCA 90 bp | AAAAAGCCACCAAGCGGTCTCGGTGAAGAAATGTCAGTGACTGAACTGTGCGGCTCCACCAGCTGTAGATaGACTGCAGTTTTAAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: KKPPSGLGEEMSVTELCGSTSCR*TAVLRT Trigger: TGTTCTTAAAACTGCAGTGCATCTACAGCTGGTGGA...GCCGCACAGTTCAGTCACTGACATTTCTTCACCGAGACCGCTTGGTGGCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | TCTACAGGGAGGCAGACTGAGGATTTATGTAAAGTTAGGCAGGGTCTAGAGGAGAGCCCTGACACACTTTaGTTTCTTGAGACAGGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: STGRQTEDLCKVRQGLEESPDTL*FLETGS Trigger: AGACCCTGTCTCAAGAAAGCAAAGTGTGTCAGGGCT...CTCCTCTAGACCCTGCCTAACTTTACATAAATCCTCAGTCTGCCTCCCTGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR-3UTR GCA 90 bp | AGCACTTCTGTTGTACTTGGAGGTTCTTCTGGGAACTCAGAAGCAGAGCCTCGAGACACTAAGGGACCATaGCCTCATTTGGTTCTGATT | + |
|
Preference number: 2 (lower is better) Translates to: STSVVLGGSSGNSEAEPRDTKGP*PHLVLI Trigger: AATCAGAACCAAATGAGGGCATGGTCCCTTAGTGTC...TCGAGGCTCTGCTTCTGAGTTCCCAGAAGAACCTCCAAGTACAACAGAAGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR TCA 90 bp | AATACTGAAAGGTTAAAACTGATGAGCAACGATCCCAGAATCATGGAGTTAAAGCCAGGGAGTCCAGGATaGACAGCACCAGTGCCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: NTERLKLMSNDPRIMELKPGSPG*TAPVPA Trigger: TGCAGGCACTGGTGCTGTTCATCCTGGACTCCCTGG...CTTTAACTCCATGATTCTGGGATCGTTGCTCATCAGTTTTAACCTTTCAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTTGAGGATAGCTTGGGCTACAAAGCCAGATATGGGGGAGGGGAGGGAGGAATTAAGTGGACAATGTaGCTGTATCAGCAGCTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: KFEDSLGYKARYGGGEGGIKWTM*LYQQLL Trigger: TAAAAGCTGCTGATACAGGCACATTGTCCACTTAAT...TCCTCCCTCCCCTCCCCCATATCTGGCTTTGTAGCCCAAGCTATCCTCAAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR GCA 90 bp | GCTGTGGTTATTTGTTTCTGGACAGCTTGTAGACATGGAATGTCTTGTTCTGGATGCGTTCGTAGCAGATaGTGTCCTCCAGGATCACGA | + |
|
Preference number: 2 (lower is better) Translates to: AVVICFWTACRHGMSCSGCVRSR*CPPGSR Trigger: TCGTGATCCTGGAGGACAGCATCTGCTACGAACGCA...TCCAGAACAAGACATTCCATGTCTACAAGCTGTCCAGAAACAAATAACCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCATGCGTAACAGAACAGGACTTATTAGCAGAGATCTCTACCTCCTCCAATTTTGGCACTTCTCATCGTaGTTTGGCAGCAATGGTGCG | + |
|
Preference number: 2 (lower is better) Translates to: SMRNRTGLISRDLYLLQFWHFSS*FGSNGA Trigger: CGCACCATTGCTGCCAAACCACGATGAGAAGTGCCA...AAATTGGAGGAGGTAGAGATCTCTGCTAATAAGTCCTGTTCTGTTACGCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR CCA 90 bp | ATTCCTTTCAAGGACAAGTTAGTTACAGAGAAAATCCAACAGCTGCAAAATGCTCAGGCTACGCGTAAATaGTCCACCGAGGCCCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: IPFKDKLVTEKIQQLQNAQATRK*STEALP Trigger: AGGGAGGGCCTCGGTGGACCATTTACGCGTAGCCTG...AGCATTTTGCAGCTGTTGGATTTTCTCTGTAACTAACTTGTCCTTGAAAGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CAA 90 bp | GACTTCCTTTTATTTTTCATTATTTGTCTGTATACGACGAAGGCATaGGGTGGGTCCCTTGGAGCCAGAGCTATAGGCAGTTGTGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: DFLLFFIICLYTTKA*GGSLGARAIGSCEL Trigger: CAGCTCACAACTGCCTATAGCTCTGGCTCCAAGGGACCCACCCAATGCCTTCGTCGTATACAGACAAATAATGAAAAATAAAAGGAAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR TCA 90 bp | AGCACTTCTGTTGTACTTGGAGGTTCTTCTGGGAACTCAGAAGCAGAGCCTCGAGTTTCTTCACACATGTaGAAGCATGGTAAACTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: STSVVLGGSSGNSEAEPRVSSHM*KHGKLE Trigger: TTCCAGTTTACCATGCTTTCACATGTGTGAAGAAAC...TCGAGGCTCTGCTTCTGAGTTCCCAGAAGAACCTCCAAGTACAACAGAAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR TCA 90 bp | TCTACAGGGAGGCAGACTGAGGATTTATGTAAAGTTAGGCAGGGTCTAGAGGAGCACCAAGTGATTAGATaGATGCACGCAGGAATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: STGRQTEDLCKVRQGLEEHQVIR*MHAGMF Trigger: AAACATTCCTGCGTGCATTCATCTAATCACTTGGTG...CTCCTCTAGACCCTGCCTAACTTTACATAAATCCTCAGTCTGCCTCCCTGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR GCA 90 bp | CCTATGAGGGTTGCCTTACAGCAGCAAAGATGGAATATAGGATTTAGTAAGAAATCGCAGAGATTCACCTaGCCCTGCCTTCAAGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PMRVALQQQRWNIGFSKKSQRFT*PCLQVL Trigger: CAGCACTTGAAGGCAGGGGCAGGTGAATCTCTGCGA...TTTCTTACTAAATCCTATATTCCATCTTTGCTGCTGTAAGGCAACCCTCATAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR GCA 90 bp | GAGCAGGGAGGCTTCCTGATGGGAACAAACCTAGCATATGACCTTGTTTCCCACAAAGGAATTAAAAACTaGTTGTGCACAGTATGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: EQGGFLMGTNLAYDLVSHKGIKN*LCTVWA Trigger: TGCCCATACTGTGCACAAGCAGTTTTTAATTCCTTT...GTGGGAAACAAGGTCATATGCTAGGTTTGTTCCCATCAGGAAGCCTCCCTGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CAA 90 bp | CAGCTGGAAGAGGAAGCGGCTAAATATCATAGGGAGGAGAATTCTTaGCCACTTATTGCCTCTGAAGAACTCAAGATTCCTTTCAAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: QLEEEAAKYHREENS*PLIASEELKIPFKD Trigger: GTCCTTGAAAGGAATCTTGAGTTCTTCAGAGGCAATAAGTGGCAAAGAATTCTCCTCCCTATGATATTTAGCCGCTTCCTCTTCCAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR GCA 90 bp | ATGATAACGACTGAGCAGCTGGAAGAGGAAGCGGCTAAATATCATAGGGAGGAGTTACTTTGCTGTCTGTaGAAGTGCAGAAATTACAGG | + |
|
Preference number: 2 (lower is better) Translates to: MITTEQLEEEAAKYHREELLCCL*KCRNYR Trigger: CCTGTAATTTCTGCACTTGCACAGACAGCAAAGTAA...CTCCTCCCTATGATATTTAGCCGCTTCCTCTTCCAGCTGCTCAGTCGTTATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR GCA 90 bp | ATGATAACGACTGAGCAGCTGGAAGAGGAAGCGGCTAAATATCATAGGGAGGAGCCAACAGCTGCAAAATaGTTTTACTTTGCTGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: MITTEQLEEEAAKYHREEPTAAK*FYFAVC Trigger: ACAGACAGCAAAGTAAAAGCATTTTGCAGCTGTTGG...CTCCTCCCTATGATATTTAGCCGCTTCCTCTTCCAGCTGCTCAGTCGTTATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR TCA 90 bp | AGCATGCGTAACAGAACAGGACTTATTAGCAGAGATCTCTACCTCCTCCAATTTATCCAGAGTCACAGCTaGACACTATTACCAACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SMRNRTGLISRDLYLLQFIQSHS*TLLPTV Trigger: GACTGTTGGTAATAGTGTTCAGCTGTGACTCTGGAT...AAATTGGAGGAGGTAGAGATCTCTGCTAATAAGTCCTGTTCTGTTACGCATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR GCA 90 bp | AACATTATACTCTCAAGCCACACCCTTGGCCCTTTTGTGGTTGGGGCTCTAAACATGGAAACGGCCCTATaGTTTCTATACAAATGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: NIILSSHTLGPFVVGALNMETAL*FLYKCL Trigger: TAAGCATTTGTATAGAAAGCATAGGGCCGTTTCCAT...GTTTAGAGCCCCAACCACAAAAGGGCCAAGGGTGTGGCTTGAGAGTATAATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR TCA 90 bp | CTGCAGACAGTAAGCAGAGCTATGGGGAATACTGAAGCAGTATTTTATAAGATGACACCAAACACCAAGTaGTTAGATGAATGCACGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LQTVSRAMGNTEAVFYKMTPNTK*LDECTQ Trigger: CTGCGTGCATTCATCTAATCACTTGGTGTTTGGTGT...CATCTTATAAAATACTGCTTCAGTATTCCCCATAGCTCTGCTTACTGTCTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR CCA 90 bp | AACATTATACTCTCAAGCCACACCCTTGGCCCTTTTGTGGTTGGGGCTCTAAACCTTGATTTAATTAAGTaGACAATGTGCCTGTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: NIILSSHTLGPFVVGALNLDLIK*TMCLYQ Trigger: CTGATACAGGCACATTGTCCACTTAATTAAATCAAG...GTTTAGAGCCCCAACCACAAAAGGGCCAAGGGTGTGGCTTGAGAGTATAATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR CCA 90 bp | AGCATGCGTAACAGAACAGGACTTATTAGCAGAGATCTCTACCTCCTCCAATTTACTGGAACACAGTTTTaGATGCTACTTAAGCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SMRNRTGLISRDLYLLQFTGTQF*MLLKQQ Trigger: TTGCTGCTTAAGTAGCATCCAAAACTGTGTTCCAGT...AAATTGGAGGAGGTAGAGATCTCTGCTAATAAGTCCTGTTCTGTTACGCATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR TCA 90 bp | CCTATGAGGGTTGCCTTACAGCAGCAAAGATGGAATATAGGATTTAGTAAGAAACACACTTTGCTTTCTTaGGACAGGGTCTCTTTACAT | + |
|
Preference number: 2 (lower is better) Translates to: PMRVALQQQRWNIGFSKKHTLLS*DRVSLH Trigger: ATGTAAAGAGACCCTGTCTCAAGAAAGCAAAGTGTG...TTTCTTACTAAATCCTATATTCCATCTTTGCTGCTGTAAGGCAACCCTCATAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR GCA 90 bp | ACTGCAGTTTTAAGAACAGCTGTGGTTATTTGTTTCTGGACAGCTTGTAGACATTCCACCAGCTGTAGATaGACTGCAGTTTTAAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: TAVLRTAVVICFWTACRHSTSCR*TAVLRT Trigger: TGTTCTTAAAACTGCAGTGCATCTACAGCTGGTGGA...ATGTCTACAAGCTGTCCAGAAACAAATAACCACAGCTGTTCTTAAAACTGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
||
| 3UTR-3UTR TCA 90 bp | AATACTGAAAGGTTAAAACTGATGAGCAACGATCCCAGAATCATGGAGTTAAAGGCTAAAGAGAAAAGTTaGTACGAAAATGGCAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: NTERLKLMSNDPRIMELKAKEKS*YENGKK Trigger: CTTCTTGCCATTTTCGTATCAACTTTTCTCTTTAGC...CTTTAACTCCATGATTCTGGGATCGTTGCTCATCAGTTTTAACCTTTCAGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
||
| 3UTR GCA 72 bp | AGAGGTGGGGGAGGGAAGCTGCCGTGCCTGAGAGGGTaGAGGGCAGAGAGCATAGCGGCCATCGGGGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RGGGGKLPCLRG*RAESIAAIGES Trigger: GCTCTCCCCGATGGCCGCTATGCTCTCTGCCCTGCACCCTCTCAGGCACGGCAGCTTCCCTCCCCCACCTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | TGGAAACACAAGGCAGTGGCCGGCCACCTGCGGGACTaGAGCAGGCGGCTCCCAAGAGGGCTGGAGACTCGA | + |
|
Preference number: 3 (lower is better) Translates to: WKHKAVAGHLRD*SRRLPRGLETR Trigger: TCGAGTCTCCAGCCCTCTTGGGAGCCGCCTGCTGCAGTCCCGCAGGTGGCCGGCCACTGCCTTGTGTTTCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | ATCAGGAGTGGAAACACAAGGCAGTGGCCGGCCACCTaGGGGACTGCAGCAGGCGGCTCCCAAGAGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: IRSGNTRQWPAT*GTAAGGSQEGW Trigger: CCAGCCCTCTTGGGAGCCGCCTGCTGCAGTCCCGCAGGTGGCCGGCCACTGCCTTGTGTTTCCACTCCTGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CCA 72 bp | CTGGAGCTCGGTATCAGGAGTGGAAACACAAGGCAGTaGCCGGCCACCTGCGGGACTGCAGCAGGCGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LELGIRSGNTRQ*PATCGTAAGGS Trigger: GGAGCCGCCTGCTGCAGTCCCGCAGGTGGCCGGCCACTGCCTTGTGTTTCCACTCCTGATACCGAGCTCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | ACACAGTTTTGGATGCTACTTAAGCAGCAACCACACTaGGGCGCGGCCCGGCGGGGCTCTCCGGCCGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TQFWMLLKQQPH*GAARRGSPAGV Trigger: CACACCGGCCGGAGAGCCCCGCCGGGCCGCGCCGCAGTGTGGTTGCTGCTTAAGTAGCATCCAAAACTGTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | CCAGCAAGTCGCGCAGCCGGCAGCCCCTGTGGTGCCTaGGTTCGTAGCAGATGCTGTCCTCCAGGATCACGA | + |
|
Preference number: 3 (lower is better) Translates to: PASRAAGSPCGA*VRSRCCPPGSR Trigger: TCGTGATCCTGGAGGACAGCATCTGCTACGAACGCAGGCACCACAGGGGCTGCCGGCTGCGCGACTTGCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
||
| 3UTR CCA 72 bp | AGGGCCCGCACTGCAGAAAGTGAGGGCTACAGGCACTaGCTCCTGCTTGCACAGTGTGGGGGCTGTGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RARTAESEGYRH*LLLAQCGGCGQ Trigger: TTGGCCACAGCCCCCACACTGTGCAAGCAGGAGCCAGTGCCTGTAGCCCTCACTTTCTGCAGTGCGGGCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR GCA 72 bp | GCACTGCAGAAAGTGAGGGCTACAGGCACTGGCTCCTaGTTGCACAGTGTGGGGGCTGTGGCCAAGGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ALQKVRATGTGS*LHSVGAVAKGG Trigger: TCCACCCTTGGCCACAGCCCCCACACTGTGCAAGCAGGAGCCAGTGCCTGTAGCCCTCACTTTCTGCAGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | GCCGGCAGCCCCTGTGGTGCCTGCGTTCGTAGCAGATaGTGTCCTCCAGGATCACGAAGTCAGTGCCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: AGSPCGACVRSR*CPPGSRSQCQR Trigger: CCTTTGGCACTGACTTCGTGATCCTGGAGGACAGCATCTGCTACGAACGCAGGCACCACAGGGGCTGCCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
||
| 3UTR CCA 72 bp | CCCTGGCTGGCCCAGAACTCACTATATAGACCAGGCTaGCCTCGACCTCGCAGAGATTCACCTGCCCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PWLAQNSLYRPG*PRPRRDSPAPA Trigger: GGCAGGGGCAGGTGAATCTCTGCGAGGTCGAGGCCAGCCTGGTCTATATAGTGAGTTCTGGGCCAGCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR CCA 72 bp | CCTCCTCAGAGGACTGTTCCACTTCCCACCGGCAGGTaGCGCTCAAACAGGGACGCTCTGAGAGTTTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PPQRTVPLPTGR*RSNRDALRVWG Trigger: TCCCCAAACTCTCAGAGCGTCCCTGTTTGAGCGCCACCTGCCGGTGGGAAGTGGAACAGTCCTCTGAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR CCA 72 bp | GGAGCAGGCAGCTTATCTGTATCCCGTACAGCCAGGTaGCCTTCATGGCCGGCAGCATGTCCAGGGAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GAGSLSVSRTAR*PSWPAACPGSP Trigger: TGGACTCCCTGGACATGCTGCCGGCCATGAAGGCCACCTGGCTGTACGGGATACAGATAAGCTGCCTGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
||
| 3UTR TCA 72 bp | ATTACCAACAGTCCCCAGGGCCCGCACTGCAGAAAGTaGGGGCTACAGGCACTGGCTCCTGCTTGCACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ITNSPQGPHCRK*GLQALAPACTV Trigger: CACTGTGCAAGCAGGAGCCAGTGCCTGTAGCCCTCACTTTCTGCAGTGCGGGCCCTGGGGACTGTTGGTAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | ATTTCCGATGATGGCGGGACATGCCTGCAGGCCGTCTaGCACCCCAGTATTCAAGTCCCACTCCTGACGCGA | + |
|
Preference number: 3 (lower is better) Translates to: ISDDGGTCLQAV*HPSIQVPLLTR Trigger: TCGCGTCAGGAGTGGGACTTGAATACTGGGGTGGCAGACGGCCTGCAGGCATGTCCCGCCATCATCGGAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CCA 72 bp | CAGGTACACCACCTCTCTCTGCTGCGTGGTGGCACTTaGTCACCTTGTAGGGAGGGACACGATGTCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QVHHLSLLRGGT*SPCREGHDVSR Trigger: CCTGGAGACATCGTGTCCCTCCCTACAAGGTGACCAAGTGCCACCACGCAGCAGAGAGAGGTGGTGTACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CCA 72 bp | TGGGTTACAGGGAAGCAGCACCCATCCAGGATGCTCTaGCAAAGCCAAGGTGCCTGCTCTTGCAGTCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: WVTGKQHPSRML*QSQGACSCSLA Trigger: GGCCAGACTGCAAGAGCAGGCACCTTGGCTTTGCCAGAGCATCCTGGATGGGTGCTGCTTCCCTGTAACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR CAA 90 bp | GGACCTCAGCAGTGCGTGCACTTCCTCTGGCGACCTCTTCGCATAGATCTGATACGTCCTGTGCACAGCTaGACTCCAGCCAGCAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: GPQQCVHFLWRPLRIDLIRPVHS*TPASNC Trigger: GCAGTTGCTGGCTGGAGTCAAGCTGTGCACAGGACG...TATCAGATCTATGCGAAGAGGTCGCCAGAGGAAGTGCACGCACTGCTGAGGTCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
||
| 3UTR TCA 72 bp | GCAAAGCCAAGGTGCCTGCTCTTGCAGTCTGGCCTCTaGATACTGAAGCAGTGTCTGAGCCACCATGCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: AKPRCLLLQSGL*ILKQCLSHHAR Trigger: CCGGGCATGGTGGCTCAGACACTGCTTCAGTATTCAGAGGCCAGACTGCAAGAGCAGGCACCTTGGCTTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR TCA 72 bp | AGGATAGACAGAGGCGGGACCTTTAGGATTCCCGGGTaGGGGACTGAGGGAAAGGAAGGAGATCCGCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: RIDRGGTFRIPG*GTEGKEGDPQW Trigger: CCATTGCGGATCTCCTTCCTTTCCCTCAGTCCCTCACCCGGGAATCCTAAAGGTCCCGCCTCTGTCTATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | AGGCTGGCCTCGACCTCGCAGAGATTCACCTGCCCCTaGCTTCAAGTGCTGGGATTAAAAGAGTGTGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: RLASTSQRFTCP*LQVLGLKECVT Trigger: GGTGACACACTCTTTTAATCCCAGCACTTGAAGGCAGGGGCAGGTGAATCTCTGCGAGGTCGAGGCCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | CGTAGCAGATGCTGTCCTCCAGGATCACGAAGTCAGTaGCAAAGGACCTCAGCAGTGCGTGCACTTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSRCCPPGSRSQ*QRTSAVRALPL Trigger: CAGAGGAAGTGCACGCACTGCTGAGGTCCTTTGGCACTGACTTCGTGATCCTGGAGGACAGCATCTGCTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
||
| 3UTR CCA 72 bp | GAACATTTGGGGCAGGCATTGAGGAGGCACCGCCGCTaGGATCAAAAATGGGTTACAGGGAAGCAGCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: EHLGQALRRHRR*DQKWVTGKQHP Trigger: TGGGTGCTGCTTCCCTGTAACCCATTTTTGATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CCA 72 bp | GGCAGGTGGCGCTCAAACAGGGACGCTCTGAGAGTTTaGGGATCAAGTGGTGGACACCCCAGAAAAAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GRWRSNRDALRV*GSSGGHPRKSK Trigger: CTTGCTTTTTCTGGGGTGTCCACCACTTGATCCCCAAACTCTCAGAGCGTCCCTGTTTGAGCGCCACCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CCA 72 bp | GGTGCACCCAGACATCTGAGGTGGGCTACCACTGACTaGAGCTCGGTATCAGGAGTGGAAACACAAGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GAPRHLRWATTD*SSVSGVETQGS Trigger: ACTGCCTTGTGTTTCCACTCCTGATACCGAGCTCCAGTCAGTGGTAGCCCACCTCAGATGTCTGGGTGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CCA 72 bp | CAATCAGCAGCAGAAGGTGCACCCAGACATCTGAGGTaGGCTACCACTGACTGGAGCTCGGTATCAGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QSAAEGAPRHLR*ATTDWSSVSGV Trigger: CACTCCTGATACCGAGCTCCAGTCAGTGGTAGCCCACCTCAGATGTCTGGGTGCACCTTCTGCTGCTGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CCA 72 bp | GTGGTCTGCAGGTCTCAAGTCAGGGTCACTCTCTCCTaGCCCATCCATTTCATGTCCGTTGGCCACATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VVCRSQVRVTLS*PIHFMSVGHIQ Trigger: CTGGATGTGGCCAACGGACATGAAATGGATGGGCCAGGAGAGAGTGACCCTGACTTGAGACCTGCAGACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
||
| 3UTR TCA 72 bp | AACCCCATGTGTCGAAGCTGGACTGGACCCTCCTTCTaGGGTGGAGTTGCAGCACTGGTGAGAAAGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: NPMCRSWTGPSF*GGVAALVRKPS Trigger: AGATGGCTTTCTCACCAGTGCTGCAACTCCACCTCAGAAGGAGGGTCCAGTCCAGCTTCGACACATGGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR TCA 72 bp | GCAGAGCCTCGAGCTTGTTCTATCCAGAGTCACAGCTaGACACTATTACCAACAGTCCCCAGGGCCCGCACT | + |
|
Preference number: 3 (lower is better) Translates to: AEPRACSIQSHS*TLLPTVPRART Trigger: AGTGCGGGCCCTGGGGACTGTTGGTAATAGTGTTCAGCTGTGACTCTGGATAGAACAAGCTCGAGGCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR TCA 72 bp | ACTCACAATCAGCAGCAGAAGGTGCACCCAGACATCTaGGGTGGGCTACCACTGACTGGAGCTCGGTATCAG | + |
|
Preference number: 3 (lower is better) Translates to: THNQQQKVHPDI*GGLPLTGARYQ Trigger: CTGATACCGAGCTCCAGTCAGTGGTAGCCCACCTCAGATGTCTGGGTGCACCTTCTGCTGCTGATTGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | TGGCCTCTGAATACTGAAGCAGTGTCTGAGCCACCATaGCCGGAGGAGGAGACGATGATAACGACTGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: WPLNTEAVSEPP*PEEETMITTEQ Trigger: CTGCTCAGTCGTTATCATCGTCTCCTCCTCCGGGCATGGTGGCTCAGACACTGCTTCAGTATTCAGAGGCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | CAGGATCACGAAGTCAGTGCCAAAGGACCTCAGCAGTaGGTGCACTTCCTCTGGCGACCTCTTCGCATAGAT | + |
|
Preference number: 3 (lower is better) Translates to: QDHEVSAKGPQQ*VHFLWRPLRID Trigger: ATCTATGCGAAGAGGTCGCCAGAGGAAGTGCACGCACTGCTGAGGTCCTTTGGCACTGACTTCGTGATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
||
| 3UTR CCA 72 bp | TGCTCTGGCAAAGCCAAGGTGCCTGCTCTTGCAGTCTaGCCTCTGAATACTGAAGCAGTGTCTGAGCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: CSGKAKVPALAV*PLNTEAVSEPP Trigger: TGGTGGCTCAGACACTGCTTCAGTATTCAGAGGCCAGACTGCAAGAGCAGGCACCTTGGCTTTGCCAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CCA 72 bp | AGTGCCAAAGGACCTCAGCAGTGCGTGCACTTCCTCTaGCGACCTCTTCGCATAGATCTGATAAACCGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SAKGPQQCVHFL*RPLRIDLINRL Trigger: CAGGCGGTTTATCAGATCTATGCGAAGAGGTCGCCAGAGGAAGTGCACGCACTGCTGAGGTCCTTTGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
||
| 3UTR GCA 72 bp | AAAAATGGGTTACAGGGAAGCAGCACCCATCCAGGATaGTCTGGCAAAGCCAAGGTGCCTGCTCTTGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: KNGLQGSSTHPG*SGKAKVPALAV Trigger: GACTGCAAGAGCAGGCACCTTGGCTTTGCCAGAGCATCCTGGATGGGTGCTGCTTCCCTGTAACCCATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | GTTCCTTTTAATCTCTTCACAGAAGCGAGGGTGGTCTaGAGGTCTCAAGTCAGGGTCACTCTCTCCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: VPFNLFTEARVV*RSQVRVTLSWP Trigger: GGGCCAGGAGAGAGTGACCCTGACTTGAGACCTGCAGACCACCCTCGCTTCTGTGAAGAGATTAAAAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGGAACCCAGAACATTTGGGGCAGGCATTGAGGAGGCACCGCCGCTGGGATACATGTTTCCTTGTGTaGTTAGCCCAAACTGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FGNPEHLGQALRRHRRWDTCFLV*LAQTAV Trigger: CACTGCAGTTTGGGCTAACAACACAAGGAAACATGT...ATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTCTGGGTTCCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTATCCCGTACAGCCAGGTGGCCTTCATGGCCGGCAGCATGTCCAGGGAGTCATGAACTGGTTAAATaGCCATGTCAGGCTAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVSRTARWPSWPAACPGSHELVK*PCQAKE Trigger: CTCTTTAGCCTGACATGGCAATTTAACCAGTTCATG...ACTCCCTGGACATGCTGCCGGCCATGAAGGCCACCTGGCTGTACGGGATACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
||
| 3UTR CCA 72 bp | GAGGGACACGATGTCTCCAGGGCTGAGAAGGAAGACTaGAGGCCAGAAGTCAAAGAGCATGAAATGCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: EGHDVSRAEKED*RPEVKEHEMPH Trigger: ATGTGGCATTTCATGCTCTTTGACTTCTGGCCTCCAGTCTTCCTTCTCAGCCCTGGAGACATCGTGTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR CAA 90 bp | TCGAAGCTGGACTGGACCCTCCTTCTGAGGTGGAGTTGCAGCACTGGTGAGAAAAGTAGTTTCAAGACTTaGTGGCCAGGTTGCTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SKLDWTLLLRWSCSTGEKSSFKT*WPGCCR Trigger: TCTGCAGCAACCTGGCCACAAAGTCTTGAAACTACT...TTTCTCACCAGTGCTGCAACTCCACCTCAGAAGGAGGGTCCAGTCCAGCTTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGGCGCTCAAACAGGGACGCTCTGAGAGTTTGGGGATCAAGTGGTGGACACCAAAATGCTTTTACTTaGCTGTCTGTGCAAGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RWRSNRDALRVWGSSGGHQNAFT*LSVQVQ Trigger: CTGCACTTGCACAGACAGCAAAGTAAAAGCATTTTG...GTGTCCACCACTTGATCCCCAAACTCTCAGAGCGTCCCTGTTTGAGCGCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR CAA 90 bp | AACATTATACTCTCAAGCCACACCCTTGGCCCTTTTGTGGTTGGGGCTCTAAACAGCGTCGGGAGCCATTaGTCTGCTTCTGGGAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: NIILSSHTLGPFVVGALNSVGSH*SASGKV Trigger: GACTTTCCCAGAAGCAGACAAATGGCTCCCGACGCT...GTTTAGAGCCCCAACCACAAAAGGGCCAAGGGTGTGGCTTGAGAGTATAATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR TCA 72 bp | GGGAAATCTTGGGACCATCAGAGTGGATTCCTAAGCTaGGAGCCAGTAAAACCCCATGTGTCGAAGCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GKSWDHQSGFLS*EPVKPHVSKLD Trigger: GTCCAGCTTCGACACATGGGGTTTTACTGGCTCTCAGCTTAGGAATCCACTCTGATGGTCCCAAGATTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR TCA 72 bp | TTTCATTTGGGAACCCAGAACATTTGGGGCAGGCATTaGGGAGGCACCGCCGCTGGGATCAAAAATGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: FHLGTQNIWGRH*GGTAAGIKNGL Trigger: TAACCCATTTTTGATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTCTGGGTTCCCAAATGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | ATGTCCAGGGAGTCCAGGATGAACAGCACCAGTGCCTaGAGCAGCATCATGAACTGGTTAAATTGCCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: MSRESRMNSTSA*SSIMNWLNCHV Trigger: GACATGGCAATTTAACCAGTTCATGATGCTGCTGCAGGCACTGGTGCTGTTCATCCTGGACTCCCTGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
||
| 3UTR CCA 72 bp | TATACTCTCAAGCCACACCCTTGGCCCTTTTGTGGTTaGGGCTCTAAACTCACAATCAGCAGCAGAAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: YTLKPHPWPFCG*GSKLTISSRRC Trigger: GCACCTTCTGCTGCTGATTGTGAGTTTAGAGCCCCAACCACAAAAGGGCCAAGGGTGTGGCTTGAGAGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR CAA 90 bp | ATGATAACGACTGAGCAGCTGGAAGAGGAAGCGGCTAAATATCATAGGGAGGAGGTGCCATCCCTGTGCTaGCTTTCCCTTAAGGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: MITTEQLEEEAAKYHREEVPSLC*LSLKGK Trigger: CTTACCCTTAAGGGAAAGCAAGCACAGGGATGGCAC...CTCCTCCCTATGATATTTAGCCGCTTCCTCTTCCAGCTGCTCAGTCGTTATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR TCA 72 bp | GTGATCTGCAGCCTTCCCAATTCTAACTCCTGTCTCTaGGTCTTCTTTCCGGCTTTCCCAGGATCATCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VICSLPNSNSCL*VFFPAFPGSSS Trigger: TGAGGATGATCCTGGGAAAGCCGGAAAGAAGACTCAGAGACAGGAGTTAGAATTGGGAAGGCTGCAGATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | ACGGCCCTATGCTTTCTATACAAATGCTTAAGAAACTaGTCCACACTCGTGGGGCTAAAGAAGGGCAACGGC | + |
|
Preference number: 3 (lower is better) Translates to: TALCFLYKCLRN*STLVGLKKGNG Trigger: GCCGTTGCCCTTCTTTAGCCCCACGAGTGTGGAGCAGTTTCTTAAGCATTTGTATAGAAAGCATAGGGCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CCA 72 bp | GATCTCAAAGAGGCTCTCACTTCCCAGGCCACCCAGTaGGTCACACATAATTCCCTCAATGACAAAGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: DLKEALTSQATQ*VTHNSLNDKVP Trigger: AGGAACTTTGTCATTGAGGGAATTATGTGTGACCCACTGGGTGGCCTGGGAAGTGAGAGCCTCTTTGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGGCGCTCAAACAGGGACGCTCTGAGAGTTTGGGGATCAAGTGGTGGACACTTAGTAAGAAATAACTaGGGAATATCAGAGGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RWRSNRDALRVWGSSGGHLVRNN*GISEGG Trigger: ACCTCCCTCTGATATTCCCAAGTTATTTCTTACTAA...GTGTCCACCACTTGATCCCCAAACTCTCAGAGCGTCCCTGTTTGAGCGCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | ACTTTGCTGTCTGTGCAAGTGCAGAAATTACAGGCTTaGCAAGCTCAAGGGGAAATCTTGGGACCATCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TLLSVQVQKLQA*QAQGEILGPSE Trigger: CTCTGATGGTCCCAAGATTTCCCCTTGAGCTTGGCAAGCCTGTAATTTCTGCACTTGCACAGACAGCAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CCA 72 bp | GAACTGTGCGGCCTGTCAACTACACTCACTCACAGCTaGCTCAGGGTCACTGAAAATCACAAGTATTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ELCGLSTTLTHS*LRVTENHKYFR Trigger: TCTGAAATACTTGTGATTTTCAGTGACCCTGAGCCAGCTGTGAGTGAGTGTAGTTGACAGGCCGCACAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CCA 72 bp | ACACCAGGCAAACATTATACTCTCAAGCCACACCCTTaGCCCTTTTGTGGTTGGGGCTCTAAACTCACAATC | + |
|
Preference number: 3 (lower is better) Translates to: TPGKHYTLKPHP*PFCGWGSKLTI Trigger: GATTGTGAGTTTAGAGCCCCAACCACAAAAGGGCCAAGGGTGTGGCTTGAGAGTATAATGTTTGCCTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR TCA 72 bp | TCCTCACCACAGCTAAAACGATCAAATGTTATTTGCTaGAAGATCTGGTTCCCGAGAGCGTCGGGAGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: SSPQLKRSNVIC*KIWFPRASGAI Trigger: AATGGCTCCCGACGCTCTCGGGAACCAGATCTTTCAGCAAATAACATTTGATCGTTTTAGCTGTGGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR CAA 90 bp | AACATTATACTCTCAAGCCACACCCTTGGCCCTTTTGTGGTTGGGGCTCTAAACTTAAGAGCACTTCTGTaGTACTTGGAGGTTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NIILSSHTLGPFVVGALNLRALL*YLEVLL Trigger: CAGAAGAACCTCCAAGTACAACAGAAGTGCTCTTAA...GTTTAGAGCCCCAACCACAAAAGGGCCAAGGGTGTGGCTTGAGAGTATAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR TCA 72 bp | TGTAAGACACTAAGGGACCATGCCCTCATTTGGTTCTaGTTGGTAAATAAAGTTTCCGGCAGCCAATGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CKTLRDHALIWF*LVNKVSGSQWL Trigger: CAGCCATTGGCTGCCGGAAACTTTATTTACCAATCAGAACCAAATGAGGGCATGGTCCCTTAGTGTCTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | GAATGTCTTGTTCTGGAATACTCTAGTGAAGTGGGCTaGATAGGAGGGCAGGTTCCTTTTAATCTCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: ECLVLEYSSEVG*IGGQVPFNLFT Trigger: TGTGAAGAGATTAAAAGGAACCTGCCCTCCTATGCAGCCCACTTCACTAGAGTATTCCAGAACAAGACATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCTTTCAAGGACAAGTTAGTTACAGAGAAAATCCAACAGCTGCAAAATGCTGACTTTGTGGCCAGGTaGCTGCAGACAGTAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: IPFKDKLVTEKIQQLQNADFVAR*LQTVSR Trigger: TCTGCTTACTGTCTGCAGCAACCTGGCCACAAAGTC...AGCATTTTGCAGCTGTTGGATTTTCTCTGTAACTAACTTGTCCTTGAAAGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR-3UTR CAA 90 bp | AACATTATACTCTCAAGCCACACCCTTGGCCCTTTTGTGGTTGGGGCTCTAAACTATGGAAATCAGAATTaGCTGAGCAGTGTCAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: NIILSSHTLGPFVVGALNYGNQN*LSSVKT Trigger: TGTTTTGACACTGCTCAGCAAATTCTGATTTCCATA...GTTTAGAGCCCCAACCACAAAAGGGCCAAGGGTGTGGCTTGAGAGTATAATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | ACCAGTGCCTGCAGCAGCATCATGAACTGGTTAAATTaGCATGTCAGGCTAAAGAGAAAAGTTGATACGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TSACSSIMNWLN*HVRLKRKVDTK Trigger: TTTCGTATCAACTTTTCTCTTTAGCCTGACATGGCAATTTAACCAGTTCATGATGCTGCTGCAGGCACTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
||
| 3UTR CCA 72 bp | ACAGTTAAAGGAATTAAAAACTGCTTGTGCACAGTATaGGCACAGTCCCATTTACGCAGGCTACGCGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TVKGIKNCLCTV*AQSHLRRLRVN Trigger: ATTTACGCGTAGCCTGCGTAAATGGGACTGTGCCCATACTGTGCACAAGCAGTTTTTAATTCCTTTAACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | AGGAAGCGGCTAAATATCATAGGGAGGAGAATTCTTTaGCACTTATTGCCTCTGAAGAACTCAAGATTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RKRLNIIGRRIL*HLLPLKNSRFL Trigger: AAGGAATCTTGAGTTCTTCAGAGGCAATAAGTGGCAAAGAATTCTCCTCCCTATGATATTTAGCCGCTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR GCA 72 bp | TTCATTAGCTCTCTTGATTTAATTAAGTGGACAATGTaGCTGTATCAGCAGCTTTTACATGCCCCCACCATT | + |
|
Preference number: 3 (lower is better) Translates to: FISSLDLIKWTM*LYQQLLHAPTI Trigger: AATGGTGGGGGCATGTAAAAGCTGCTGATACAGGCACATTGTCCACTTAATTAAATCAAGAGAGCTAATGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CCA 72 bp | ACTGCAGTTTTAAGAACAGCTGTGGTTATTTGTTTCTaGACAGCTTGTAGACATGGAATGTCTTGTTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TAVLRTAVVICF*TACRHGMSCSG Trigger: TCCAGAACAAGACATTCCATGTCTACAAGCTGTCCAGAAACAAATAACCACAGCTGTTCTTAAAACTGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCTTTCAAGGACAAGTTAGTTACAGAGAAAATCCAACAGCTGCAAAATGCTACACACTTTGCTTTCTaGAGACAGGGTCTCTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: IPFKDKLVTEKIQQLQNATHFAF*RQGLFT Trigger: TGTAAAGAGACCCTGTCTCAAGAAAGCAAAGTGTGT...AGCATTTTGCAGCTGTTGGATTTTCTCTGTAACTAACTTGTCCTTGAAAGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR TCA 72 bp | CTTGGATCACAAGACACCAAACACCAAGTGATTAGATaGATGCACGCAGGAATGTTTAACATAAATGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LGSQDTKHQVIR*MHAGMFNINAN Trigger: GTTTGCATTTATGTTAAACATTCCTGCGTGCATTCATCTAATCACTTGGTGTTTGGTGTCTTGTGATCCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR TCA 72 bp | TTGACCTTCAAAGCAACAGAGGACACCACAGATTATTaGAAAGAGCTTTATCTAGTATATAATCTCCACCTA | + |
|
Preference number: 3 (lower is better) Translates to: LTFKATEDTTDY*KELYLVYNLHL Trigger: TAGGTGGAGATTATATACTAGATAAAGCTCTTTTCAATAATCTGTGGTGTCCTCTGTTGCTTTGAAGGTCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CCA 72 bp | AAAGTTAATTTCATTAGCTCTCTTGATTTAATTAAGTaGACAATGTGCCTGTATCAGCAGCTTTTACATGCC | + |
|
Preference number: 3 (lower is better) Translates to: KVNFISSLDLIK*TMCLYQQLLHA Trigger: GGCATGTAAAAGCTGCTGATACAGGCACATTGTCCACTTAATTAAATCAAGAGAGCTAATGAAATTAACTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CAA 72 bp | GGGTCACTCTCTCCTGGCCCATCCATTTCATGTCCGTaGGCCACATCCAGCAAGTCGCGCAGCCGGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSLSPGPSISCP*ATSSKSRSRQP Trigger: GGGCTGCCGGCTGCGCGACTTGCTGGATGTGGCCAACGGACATGAAATGGATGGGCCAGGAGAGAGTGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143590.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGGCGCTCAAACAGGGACGCTCTGAGAGTTTGGGGATCAAGTGGTGGACACGCCAGGTGGCCTTCATaGCCGGCAGCATGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RWRSNRDALRVWGSSGGHARWPS*PAACPG Trigger: CCCTGGACATGCTGCCGGCCATGAAGGCCACCTGGC...GTGTCCACCACTTGATCCCCAAACTCTCAGAGCGTCCCTGTTTGAGCGCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CAA 72 bp | CTGCAGAAAGTGAGGGCTACAGGCACTGGCTCCTGCTaGCACAGTGTGGGGGCTGTGGCCAAGGGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LQKVRATGTGSC*HSVGAVAKGGS Trigger: AGATCCACCCTTGGCCACAGCCCCCACACTGTGCAAGCAGGAGCCAGTGCCTGTAGCCCTCACTTTCTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR GCA 90 bp | TTTGGGAACCCAGAACATTTGGGGCAGGCATTGAGGAGGCACCGCCGCTGGGATCCCAGACTTCAGAGCTaGACAGGCCGAAGGACGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FGNPEHLGQALRRHRRWDPRLQS*TGRRTR Trigger: TCGCGTCCTTCGGCCTGTGCAGCTCTGAAGTCTGGG...ATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTCTGGGTTCCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CAA 72 bp | GGCTGTGCCTGTCTTTCATTTGGGAACCCAGAACATTaGGGGCAGGCATTGAGGAGGCACCGCCGCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GCACLSFGNPEH*GQALRRHRRWD Trigger: ATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTCTGGGTTCCCAAATGAAAGACAGGCACAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR GCA 90 bp | TCGAAGCTGGACTGGACCCTCCTTCTGAGGTGGAGTTGCAGCACTGGTGAGAAAAGCCCCTGTGGTGCCTaGGTTCGTAGCAGATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKLDWTLLLRWSCSTGEKSPCGA*VRSRCC Trigger: ACAGCATCTGCTACGAACGCAGGCACCACAGGGGCT...TTTCTCACCAGTGCTGCAACTCCACCTCAGAAGGAGGGTCCAGTCCAGCTTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR CCA 90 bp | TTTGGGAACCCAGAACATTTGGGGCAGGCATTGAGGAGGCACCGCCGCTGGGATAGGGTCACTCTCTCCTaGCCCATCCATTTCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FGNPEHLGQALRRHRRWDRVTLS*PIHFMS Trigger: GGACATGAAATGGATGGGCCAGGAGAGAGTGACCCT...ATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTCTGGGTTCCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR GCA 90 bp | CTTGTAGGGAGGGACACGATGTCTCCAGGGCTGAGAAGGAAGACTGGAGGCCAGGATGAACAGCACCAGTaGCTGCAGCAGCATCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVGRDTMSPGLRRKTGGQDEQHQ*LQQHHE Trigger: TTCATGATGCTGCTGCAGGCACTGGTGCTGTTCATC...CTGGCCTCCAGTCTTCCTTCTCAGCCCTGGAGACATCGTGTCCCTCCCTACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR TCA 90 bp | CTTGTAGGGAGGGACACGATGTCTCCAGGGCTGAGAAGGAAGACTGGAGGCCAGTTTGGGTTACAGAGATaGACCAGCCTCAGTAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVGRDTMSPGLRRKTGGQFGLQR*TSLSSS Trigger: ACTGCTACTGAGGCTGGTTCATCTCTGTAACCCAAA...CTGGCCTCCAGTCTTCCTTCTCAGCCCTGGAGACATCGTGTCCCTCCCTACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR GCA 90 bp | CAACGATCCCAGAATCATGGAGTTAAAGAACTGAAGCGTGCAGACGAGGAGCAGGACGTACCAGAGGGCTaGCAACAGTCCCGACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRSQNHGVKELKRADEEQDVPEG*QQSRQP Trigger: TGGCTGTCGGGACTGTTGGCAGCCCTCTGGTACGTC...CTGCTCCTCGTCTGCACGCTTCAGTTCTTTAACTCCATGATTCTGGGATCGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGGAACCCAGAACATTTGGGGCAGGCATTGAGGAGGCACCGCCGCTGGGATCCGAACAGAATGGTATaGATCAGGTTGTACGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FGNPEHLGQALRRHRRWDPNRMV*IRLYAA Trigger: AGCTGCGTACAACCTGATCCATACCATTCTGTTCGG...ATCCCAGCGGCGGTGCCTCCTCAATGCCTGCCCCAAATGTTCTGGGTTCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR GCA 90 bp | GGCCGTCTGCCACCCCAGTATTCAAGTCCCACTCCTGACGCGAACTCCACCAGCCAGGAAGTAGGTAATTaGTGCAATCTGAATTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRLPPQYSSPTPDANSTSQEVGN*CNLNCK Trigger: TTTGCAATTCAGATTGCAGCAATTACCTACTTCCTG...GCTGGTGGAGTTCGCGTCAGGAGTGGGACTTGAATACTGGGGTGGCAGACGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCCACCAAGCGGTCTCGGTGAAGAAATGTCAGTGACTGAACTGTGCGGCTCCGTTGAAGGAGGTTaGTCGTCCTCATGGATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKPPSGLGEEMSVTELCGSVEGG*SSSWIQ Trigger: CTGAATCCATGAGGACGATCAACCTCCTTCAACGGA...GCCGCACAGTTCAGTCACTGACATTTCTTCACCGAGACCGCTTGGTGGCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR TCA 90 bp | GAGCAGGGAGGCTTCCTGATGGGAACAAACCTAGCATATGACCTTGTTTCCCACATGGAGTTAAAGAACTaGAGCGTGCAGACGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQGGFLMGTNLAYDLVSHMELKN*SVQTRS Trigger: GCTCCTCGTCTGCACGCTTCAGTTCTTTAACTCCAT...GTGGGAAACAAGGTCATATGCTAGGTTTGTTCCCATCAGGAAGCCTCCCTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR TCA 90 bp | CTTGTAGGGAGGGACACGATGTCTCCAGGGCTGAGAAGGAAGACTGGAGGCCAGGACTTGTGGAATCACTaGGATTATGAAAGGCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LVGRDTMSPGLRRKTGGQDLWNH*DYERLQ Trigger: TTGTAGCCTTTCATAATCTCAGTGATTCCACAAGTC...CTGGCCTCCAGTCTTCCTTCTCAGCCCTGGAGACATCGTGTCCCTCCCTACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR GCA 90 bp | ATGATAACGACTGAGCAGCTGGAAGAGGAAGCGGCTAAATATCATAGGGAGGAGCAGCCAGCAACTGCATaGTTCCAGCGAACACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MITTEQLEEEAAKYHREEQPATA*FQRTQP Trigger: AGGCTGTGTTCGCTGGAAGCATGCAGTTGCTGGCTG...CTCCTCCCTATGATATTTAGCCGCTTCCTCTTCCAGCTGCTCAGTCGTTATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR CCA 90 bp | AGCACTTCTGTTGTACTTGGAGGTTCTTCTGGGAACTCAGAAGCAGAGCCTCGAGCGAACACACACATGTaGGAGGTCCACAGGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: STSVVLGGSSGNSEAEPRANTHM*EVHRYF Trigger: GAAGTACCTGTGGACCTCCCACATGTGTGTGTTCGC...TCGAGGCTCTGCTTCTGAGTTCCCAGAAGAACCTCCAAGTACAACAGAAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR CCA 90 bp | AGCACTTCTGTTGTACTTGGAGGTTCTTCTGGGAACTCAGAAGCAGAGCCTCGATGCGTGCACTTCCTCTaGCGACCTCTTCGCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: STSVVLGGSSGNSEAEPRCVHFL*RPLRID Trigger: ATCTATGCGAAGAGGTCGCCAGAGGAAGTGCACGCA...TCGAGGCTCTGCTTCTGAGTTCCCAGAAGAACCTCCAAGTACAACAGAAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR CCA 90 bp | AGCACTTCTGTTGTACTTGGAGGTTCTTCTGGGAACTCAGAAGCAGAGCCTCGATCACAGAAGCGAGGGTaGTCTGCAGGTCTCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: STSVVLGGSSGNSEAEPRSQKRG*SAGLKS Trigger: TGACTTGAGACCTGCAGACCACCCTCGCTTCTGTGA...TCGAGGCTCTGCTTCTGAGTTCCCAGAAGAACCTCCAAGTACAACAGAAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR TCA 90 bp | CTTGTAGGGAGGGACACGATGTCTCCAGGGCTGAGAAGGAAGACTGGAGGCCAGGCTAAAGAGAAAAGTTaGTACGAAAATGGCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVGRDTMSPGLRRKTGGQAKEKS*YENGKK Trigger: CTTCTTGCCATTTTCGTATCAACTTTTCTCTTTAGC...CTGGCCTCCAGTCTTCCTTCTCAGCCCTGGAGACATCGTGTCCCTCCCTACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR GCA 90 bp | GAGCAGGTACACCACCTCTCTCTGCTGCGTGGTGGCACTTGGTCACCTTGTAGGATGAACTGGTTAAATTaGCATGTCAGGCTAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EQVHHLSLLRGGTWSPCRMNWLN*HVRLKR Trigger: TCTCTTTAGCCTGACATGGCAATTTAACCAGTTCAT...CCTACAAGGTGACCAAGTGCCACCACGCAGCAGAGAGAGGTGGTGTACCTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR GCA 90 bp | CTGCAGACAGTAAGCAGAGCTATGGGGAATACTGAAGCAGTATTTTATAAGATGGACGTACCAGAGGGCTaGCAACAGTCCCGACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQTVSRAMGNTEAVFYKMDVPEG*QQSRQP Trigger: TGGCTGTCGGGACTGTTGGCAGCCCTCTGGTACGTC...CATCTTATAAAATACTGCTTCAGTATTCCCCATAGCTCTGCTTACTGTCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR CCA 90 bp | CCTATGAGGGTTGCCTTACAGCAGCAAAGATGGAATATAGGATTTAGTAAGAAATCCCGTACAGCCAGGTaGCCTTCATGGCCGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PMRVALQQQRWNIGFSKKSRTAR*PSWPAA Trigger: TGCTGCCGGCCATGAAGGCCACCTGGCTGTACGGGA...TTTCTTACTAAATCCTATATTCCATCTTTGCTGCTGTAAGGCAACCCTCATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR TCA 90 bp | CCTATGAGGGTTGCCTTACAGCAGCAAAGATGGAATATAGGATTTAGTAAGAAACCAGGGAGTCCAGGATaGACAGCACCAGTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PMRVALQQQRWNIGFSKKPGSPG*TAPVPA Trigger: TGCAGGCACTGGTGCTGTTCATCCTGGACTCCCTGG...TTTCTTACTAAATCCTATATTCCATCTTTGCTGCTGTAAGGCAACCCTCATAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR GCA 90 bp | CTGCAGACAGTAAGCAGAGCTATGGGGAATACTGAAGCAGTATTTTATAAGATGGAAGCGAGGGTGGTCTaGAGGTCTCAAGTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LQTVSRAMGNTEAVFYKMEARVV*RSQVRV Trigger: GACCCTGACTTGAGACCTGCAGACCACCCTCGCTTC...CATCTTATAAAATACTGCTTCAGTATTCCCCATAGCTCTGCTTACTGTCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR CCA 90 bp | AAGTTTGAGGATAGCTTGGGCTACAAAGCCAGATATGGGGGAGGGGAGGGAGGAAGAGGCACAACCAGATaGCAATTTCTTTTCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KFEDSLGYKARYGGGEGGRGTTR*QFLFQL Trigger: AAGTTGGAAAAGAAATTGCCATCTGGTTGTGCCTCT...TCCTCCCTCCCCTCCCCCATATCTGGCTTTGTAGCCCAAGCTATCCTCAAACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR CCA 90 bp | AAAAAGCCACCAAGCGGTCTCGGTGAAGAAATGTCAGTGACTGAACTGTGCGGCAGCAGCATCATGAACTaGTTAAATTGCCATGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKPPSGLGEEMSVTELCGSSIMN*LNCHVR Trigger: CCTGACATGGCAATTTAACCAGTTCATGATGCTGCT...GCCGCACAGTTCAGTCACTGACATTTCTTCACCGAGACCGCTTGGTGGCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR GCA 90 bp | AGCATGCGTAACAGAACAGGACTTATTAGCAGAGATCTCTACCTCCTCCAATTTTGCGTTCGTAGCAGATaGTGTCCTCCAGGATCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SMRNRTGLISRDLYLLQFCVRSR*CPPGSR Trigger: TCGTGATCCTGGAGGACAGCATCTGCTACGAACGCA...AAATTGGAGGAGGTAGAGATCTCTGCTAATAAGTCCTGTTCTGTTACGCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR CCA 90 bp | GAGCAGGGAGGCTTCCTGATGGGAACAAACCTAGCATATGACCTTGTTTCCCACTGGAATGTCTTGTTCTaGAATACTCTAGTGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQGGFLMGTNLAYDLVSHWNVLF*NTLVKW Trigger: CCACTTCACTAGAGTATTCCAGAACAAGACATTCCA...GTGGGAAACAAGGTCATATGCTAGGTTTGTTCCCATCAGGAAGCCTCCCTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR GCA 90 bp | CCTATGAGGGTTGCCTTACAGCAGCAAAGATGGAATATAGGATTTAGTAAGAAAAAAGGACCTCAGCAGTaGGTGCACTTCCTCTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PMRVALQQQRWNIGFSKKKGPQQ*VHFLWR Trigger: TCGCCAGAGGAAGTGCACGCACTGCTGAGGTCCTTT...TTTCTTACTAAATCCTATATTCCATCTTTGCTGCTGTAAGGCAACCCTCATAGG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR TCA 90 bp | TGCAACAGTAGTTTCCAAATTCTAGTCAGGAAGGATCCAGTCTTCAGGTTTTTCTCCGTTGAAGGAGGTTaGTCGTCCTCATGGATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CNSSFQILVRKDPVFRFFSVEGG*SSSWIQ Trigger: CTGAATCCATGAGGACGATCAACCTCCTTCAACGGA...GAAAAACCTGAAGACTGGATCCTTCCTGACTAGAATTTGGAAACTACTGTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
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| 3UTR CAA 72 bp | TTATTTTTCATTATTTGTCTGTATACGACGAAGGCATaGGGTGGGTCCCTTGGAGCCAGAGCTATAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFFIICLYTTKA*GGSLGARAIGS Trigger: ACTGCCTATAGCTCTGGCTCCAAGGGACCCACCCAATGCCTTCGTCGTATACAGACAAATAATGAAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| 3UTR CAA 72 bp | TACAGTTTGATGCAGCTGTTTATGCACAGGTTAATGTaGCAGCAGAGAAAGTCTGGGATACGCTACCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YSLMQLFMHRLM*QQRKSGIRYLL Trigger: TAGAAGGTAGCGTATCCCAGACTTTCTCTGCTGCAACATTAACCTGTGCATAAACAGCTGCATCAAACTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR CAA 72 bp | GAGGAAGCGGCTAAATATCATAGGGAGGAGAATTCTTaGCCACTTATTGCCTCTGAAGAACTCAAGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EEAAKYHREENS*PLIASEELKIP Trigger: AGGAATCTTGAGTTCTTCAGAGGCAATAAGTGGCAAAGAATTCTCCTCCCTATGATATTTAGCCGCTTCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR CAA 72 bp | CAGGACTTATTAGCAGAGATCTCTACCTCCTCCAATTaGACCTTCAAAGCAACAGAGGACACCACAGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: QDLLAEISTSSN*TFKATEDTTDY Trigger: ATAATCTGTGGTGTCCTCTGTTGCTTTGAAGGTCAAATTGGAGGAGGTAGAGATCTCTGCTAATAAGTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR TCA 90 bp | ATTCCTTTCAAGGACAAGTTAGTTACAGAGAAAATCCAACAGCTGCAAAATGCTACATTCCGTCCTGAATaGGATCTCTCGCTCTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPFKDKLVTEKIQQLQNATFRPE*DLSLYF Trigger: GAAGTAGAGCGAGAGATCTCATTCAGGACGGAATGT...AGCATTTTGCAGCTGTTGGATTTTCTCTGTAACTAACTTGTCCTTGAAAGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR CCA 90 bp | CTGCAGACAGTAAGCAGAGCTATGGGGAATACTGAAGCAGTATTTTATAAGATGGAACACAGCCTTCCTTaGTGTGTTAGAGTTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQTVSRAMGNTEAVFYKMEHSLP*CVRVNP Trigger: TGGATTAACTCTAACACACCAAGGAAGGCTGTGTTC...CATCTTATAAAATACTGCTTCAGTATTCCCCATAGCTCTGCTTACTGTCTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR CCA 90 bp | CTGCAGACAGTAAGCAGAGCTATGGGGAATACTGAAGCAGTATTTTATAAGATGTTCTTGTCTGATCCATaGACTTCAGACTTGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQTVSRAMGNTEAVFYKMFLSDP*TSDLWN Trigger: ATTCCACAAGTCTGAAGTCCATGGATCAGACAAGAA...CATCTTATAAAATACTGCTTCAGTATTCCCCATAGCTCTGCTTACTGTCTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR CCA 90 bp | CTGCAGACAGTAAGCAGAGCTATGGGGAATACTGAAGCAGTATTTTATAAGATGAAGTTGATACGAAAATaGCAAGAAGTGTCAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQTVSRAMGNTEAVFYKMKLIRK*QEVSAF Trigger: AAAGGCTGACACTTCTTGCCATTTTCGTATCAACTT...CATCTTATAAAATACTGCTTCAGTATTCCCCATAGCTCTGCTTACTGTCTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| 3UTR CAA 72 bp | CTAAATATCATAGGGAGGAGAATTCTTTGCCACTTATaGCCTCTGAAGAACTCAAGATTCCTTTCAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LNIIGRRILCHL*PLKNSRFLSRT Trigger: TGTCCTTGAAAGGAATCTTGAGTTCTTCAGAGGCAATAAGTGGCAAAGAATTCTCCTCCCTATGATATTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS GCA 90 bp | CTCGACTCTTGTGGTGTCTATTCTGTTGGTGACGTACCAGAGGGCTaGCAACAGTCCCGACAGCCAGGTGCCACTAAGGAGCCAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LDSCGVYSVGDVPEG*QQSRQPGATKEPAG Trigger: ACCAGCTGGCTCCTTAGTGGCACCTGGCTGTCGGGACTGTTGGCAGCCCTCTGGTACGTCACCAACAGAATAGACACCACAAGAGTCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR CAA 90 bp | AAGTTTGAGGATAGCTTGGGCTACAAAGCCAGATATGGGGGAGGGGAGGGAGGACGTCCTGTGCACAGCTaGACTCCAGCCAGCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: KFEDSLGYKARYGGGEGGRPVHS*TPASNC Trigger: GCAGTTGCTGGCTGGAGTCAAGCTGTGCACAGGACG...TCCTCCCTCCCCTCCCCCATATCTGGCTTTGTAGCCCAAGCTATCCTCAAACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS GCA 90 bp | TACAGAGATGAACCAGCCTCAGTAGCAGTTCCCAGACTTCAGAGCTaGACAGGCCGAAGGACGCGAACACACACATGTGGGAGGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: YRDEPASVAVPRLQS*TGRRTRTHTCGRST Trigger: TGTGGACCTCCCACATGTGTGTGTTCGCGTCCTTCGGCCTGTGCAGCTCTGAAGTCTGGGAACTGCTACTGAGGCTGGTTCATCTCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CCA 90 bp | CAGACTTCAGAGCTGCACAGGCCGAAGGACGCGAACACACACATGTaGGAGGTCCACAGGTACTTCATCCTCATCGTACTCAACGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QTSELHRPKDANTHM*EVHRYFILIVLNAK Trigger: CTTGGCGTTGAGTACGATGAGGATGAAGTACCTGTGGACCTCCCACATGTGTGTGTTCGCGTCCTTCGGCCTGTGCAGCTCTGAAGTCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CCA 90 bp | CGGGTCGTAGAATTCTTTCAGCTCCGAGAGTTCATCCATCACTCCTaGCCAGGACTTATAGCACAGGTACAGCAGGGTGAGAACGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RVVEFFQLREFIHHS*PGLIAQVQQGENGH Trigger: GTGCCCGTTCTCACCCTGCTGTACCTGTGCTATAAGTCCTGGCCAGGAGTGATGGATGAACTCTCGGAGCTGAAAGAATTCTACGACCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CCA 90 bp | TTCATCCTCATCGTACTCAACGCCAAGACCCCGAACAGAATGGTATaGATCAGGTTGTACGCAGCTTCTGGCTTCAGGTCAACAGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: FILIVLNAKTPNRMV*IRLYAASGFRSTAR Trigger: GCGTGCTGTTGACCTGAAGCCAGAAGCTGCGTACAACCTGATCCATACCATTCTGTTCGGGGTCTTGGCGTTGAGTACGATGAGGATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CCA 90 bp | GGTACTTCATCCTCATCGTACTCAACGCCAAGACCCCGAACAGAATaGTATGGATCAGGTTGTACGCAGCTTCTGGCTTCAGGTCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: GTSSSSYSTPRPRTE*YGSGCTQLLASGQQ Trigger: CTGTTGACCTGAAGCCAGAAGCTGCGTACAACCTGATCCATACCATTCTGTTCGGGGTCTTGGCGTTGAGTACGATGAGGATGAAGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CCA 90 bp | CAAGACCCCGAACAGAATGGTATGGATCAGGTTGTACGCAGCTTCTaGCTTCAGGTCAACAGCACGCTTTCTTGTCTGATCCATGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: QDPEQNGMDQVVRSF*LQVNSTLSCLIHGL Trigger: AAGTCCATGGATCAGACAAGAAAGCGTGCTGTTGACCTGAAGCCAGAAGCTGCGTACAACCTGATCCATACCATTCTGTTCGGGGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS-3UTR CAA 90 bp | AAGTTTGAGGATAGCTTGGGCTACAAAGCCAGATATGGGGGAGGGGAGGGAGGACATCGAAATCCCTTGTaGCTCCAAACCCAAATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KFEDSLGYKARYGGGEGGHRNPL*LQTQIW Trigger: CCAAATTTGGGTTTGGAGCAACAAGGGATTTCGATG...TCCTCCCTCCCCTCCCCCATATCTGGCTTTGTAGCCCAAGCTATCCTCAAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR CAA 90 bp | TCGAAGCTGGACTGGACCCTCCTTCTGAGGTGGAGTTGCAGCACTGGTGAGAAAACTGAGAAAAACTTCTaGGTAAATGTTCATCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SKLDWTLLLRWSCSTGEKTEKNF*VNVHPL Trigger: CAACGGATGAACATTTACCAAGAAGTTTTTCTCAGT...TTTCTCACCAGTGCTGCAACTCCACCTCAGAAGGAGGGTCCAGTCCAGCTTCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR CAA 90 bp | AGCACTTCTGTTGTACTTGGAGGTTCTTCTGGGAACTCAGAAGCAGAGCCTCGACACACAGATAGAGATTaGCATCGAAATCCCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: STSVVLGGSSGNSEAEPRHTDRD*HRNPLL Trigger: CAACAAGGGATTTCGATGCAAATCTCTATCTGTGTG...TCGAGGCTCTGCTTCTGAGTTCCCAGAAGAACCTCCAAGTACAACAGAAGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS GCA 90 bp | GCCACTAAGGAGCCAGCTGGTTATATAAAGGGCCGTGACATAGACTaGTTGGAGCCCGAACAGAGTGTAGATATAAAAATAAACAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ATKEPAGYIKGRDID*LEPEQSVDIKINRF Trigger: GAACCTGTTTATTTTTATATCTACACTCTGTTCGGGCTCCAAGCAGTCTATGTCACGGCCCTTTATATAACCAGCTGGCTCCTTAGTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051377.15 ENSMUST00000144416.2 |
||
| CDS-3UTR CAA 90 bp | TCTACAGGGAGGCAGACTGAGGATTTATGTAAAGTTAGGCAGGGTCTAGAGGAGCATGAACTGGTTAAATaGCCATGTCAGGCTAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: STGRQTEDLCKVRQGLEEHELVK*PCQAKE Trigger: CTCTTTAGCCTGACATGGCAATTTAACCAGTTCATG...CTCCTCTAGACCCTGCCTAACTTTACATAAATCCTCAGTCTGCCTCCCTGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS-3UTR CAA 90 bp | CAACGATCCCAGAATCATGGAGTTAAAGAACTGAAGCGTGCAGACGAGGAGCAGACTGAGAAAAACTTCTaGGTAAATGTTCATCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QRSQNHGVKELKRADEEQTEKNF*VNVHPL Trigger: CAACGGATGAACATTTACCAAGAAGTTTTTCTCAGT...CTGCTCCTCGTCTGCACGCTTCAGTTCTTTAACTCCATGATTCTGGGATCGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144416.2 |
||
| CDS GCA 90 bp | CTTCAGACTTGTGGAATCACTGAGATTATGAAAGGCTACAACGGATaGTGTAACCACTGTGACCACGAGGACAAACATGTATGCGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQTCGITEIMKGYNG*CNHCDHEDKHVCVK Trigger: TTTTACGCATACATGTTTGTCCTCGTGGTCACAGTGGTTACAGCATCCGTTGTAGCCTTTCATAATCTCAGTGATTCCACAAGTCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS TCA 90 bp | CATCATGAACTGGTTAAATTGCCATGTCAGGCTAAAGAGAAAAGTTaGTACGAAAATGGCAAGAAGTGTCAGCCTTTCAGAAAGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HHELVKLPCQAKEKS*YENGKKCQPFRKRL Trigger: CAGCCTCTTTCTGAAAGGCTGACACTTCTTGCCATTTTCGTATCAACTTTTCTCTTTAGCCTGACATGGCAATTTAACCAGTTCATGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS GCA 72 bp | GAACCAGCCTCAGTAGCAGTTCCCAGACTTCAGAGCTaGACAGGCCGAAGGACGCGAACACACACATGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: EPASVAVPRLQS*TGRRTRTHTCG Trigger: CCCACATGTGTGTGTTCGCGTCCTTCGGCCTGTGCAGCTCTGAAGTCTGGGAACTGCTACTGAGGCTGGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
||
| CDS CCA 72 bp | GAGCTGCACAGGCCGAAGGACGCGAACACACACATGTaGGAGGTCCACAGGTACTTCATCCTCATCGTACTC | + |
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Preference number: 6 (lower is better) Translates to: ELHRPKDANTHM*EVHRYFILIVL Trigger: GAGTACGATGAGGATGAAGTACCTGTGGACCTCCCACATGTGTGTGTTCGCGTCCTTCGGCCTGTGCAGCTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CAA 72 bp | AACGCCAAGACCCCGAACAGAATGGTATGGATCAGGTaGTACGCAGCTTCTGGCTTCAGGTCAACAGCACGC | + |
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Preference number: 6 (lower is better) Translates to: NAKTPNRMVWIR*YAASGFRSTAR Trigger: GCGTGCTGTTGACCTGAAGCCAGAAGCTGCGTACAACCTGATCCATACCATTCTGTTCGGGGTCTTGGCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CAA 90 bp | ATCGTACTCAACGCCAAGACCCCGAACAGAATGGTATGGATCAGGTaGTACGCAGCTTCTGGCTTCAGGTCAACAGCACGCTTTCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: IVLNAKTPNRMVWIR*YAASGFRSTARFLV Trigger: GACAAGAAAGCGTGCTGTTGACCTGAAGCCAGAAGCTGCGTACAACCTGATCCATACCATTCTGTTCGGGGTCTTGGCGTTGAGTACGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CCA 72 bp | ATCGTACTCAACGCCAAGACCCCGAACAGAATGGTATaGATCAGGTTGTACGCAGCTTCTGGCTTCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: IVLNAKTPNRMV*IRLYAASGFRS Trigger: TGACCTGAAGCCAGAAGCTGCGTACAACCTGATCCATACCATTCTGTTCGGGGTCTTGGCGTTGAGTACGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CCA 72 bp | GAATTCTTTCAGCTCCGAGAGTTCATCCATCACTCCTaGCCAGGACTTATAGCACAGGTACAGCAGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: EFFQLREFIHHS*PGLIAQVQQGE Trigger: CTCACCCTGCTGTACCTGTGCTATAAGTCCTGGCCAGGAGTGATGGATGAACTCTCGGAGCTGAAAGAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CCA 72 bp | CAGCAACTGCATGCTTCCAGCGAACACAGCCTTCCTTaGTGTGTTAGAGTTAATCCAGGTCATCAGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: QQLHASSEHSLP*CVRVNPGHQLH Trigger: GTGGAGCTGATGACCTGGATTAACTCTAACACACCAAGGAAGGCTGTGTTCGCTGGAAGCATGCAGTTGCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CAA 72 bp | GCAGGAGGCCGAAGGCCTCCTCACACAGATAGAGATTaGCATCGAAATCCCTTGTTGCTCCAAACCCAAATT | + |
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Preference number: 6 (lower is better) Translates to: AGGRRPPHTDRD*HRNPLLLQTQI Trigger: AATTTGGGTTTGGAGCAACAAGGGATTTCGATGCAAATCTCTATCTGTGTGAGGAGGCCTTCGGCCTCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CAA 72 bp | ACGCAGCTTCTGGCTTCAGGTCAACAGCACGCTTTCTaGTCTGATCCATGGACTTCAGACTTGTGGAATCAC | + |
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Preference number: 6 (lower is better) Translates to: TQLLASGQQHAF*SDPWTSDLWNH Trigger: GTGATTCCACAAGTCTGAAGTCCATGGATCAGACAAGAAAGCGTGCTGTTGACCTGAAGCCAGAAGCTGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS TCA 72 bp | GCTTCTGGCTTCAGGTCAACAGCACGCTTTCTTGTCTaGTCCATGGACTTCAGACTTGTGGAATCACTGAGA | + |
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Preference number: 6 (lower is better) Translates to: ASGFRSTARFLV*SMDFRLVESLR Trigger: TCTCAGTGATTCCACAAGTCTGAAGTCCATGGATCAGACAAGAAAGCGTGCTGTTGACCTGAAGCCAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS TCA 72 bp | TCCATGGACTTCAGACTTGTGGAATCACTGAGATTATaGAAGGCTACAACGGATGCTGTAACCACTGTGACC | + |
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Preference number: 6 (lower is better) Translates to: SMDFRLVESLRL*KATTDAVTTVT Trigger: GGTCACAGTGGTTACAGCATCCGTTGTAGCCTTTCATAATCTCAGTGATTCCACAAGTCTGAAGTCCATGGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CAA 72 bp | GTCCTGAATGAGATCTCTCGCTCTACTTCCTTAATATaGGAAAACCACAAATCGTTCTCATGCAGGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VLNEISRSTSLI*ENHKSFSCRVA Trigger: GGCCACCCTGCATGAGAACGATTTGTGGTTTTCCAATATTAAGGAAGTAGAGCGAGAGATCTCATTCAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS GCA 72 bp | GAGCCAGCTGGTTATATAAAGGGCCGTGACATAGACTaGTTGGAGCCCGAACAGAGTGTAGATATAAAAATA | + |
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Preference number: 6 (lower is better) Translates to: EPAGYIKGRDID*LEPEQSVDIKI Trigger: TATTTTTATATCTACACTCTGTTCGGGCTCCAAGCAGTCTATGTCACGGCCCTTTATATAACCAGCTGGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051377.15 ENSMUST00000144416.2 |
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| CDS GCA 72 bp | TGTGGAATCACTGAGATTATGAAAGGCTACAACGGATaGTGTAACCACTGTGACCACGAGGACAAACATGTA | + |
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Preference number: 6 (lower is better) Translates to: CGITEIMKGYNG*CNHCDHEDKHV Trigger: TACATGTTTGTCCTCGTGGTCACAGTGGTTACAGCATCCGTTGTAGCCTTTCATAATCTCAGTGATTCCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051377.15 |
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| CDS CAA 72 bp | CCAGCTGGTTATATAAAGGGCCGTGACATAGACTGCTaGGAGCCCGAACAGAGTGTAGATATAAAAATAAAC | + |
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Preference number: 6 (lower is better) Translates to: PAGYIKGRDIDC*EPEQSVDIKIN Trigger: GTTTATTTTTATATCTACACTCTGTTCGGGCTCCAAGCAGTCTATGTCACGGCCCTTTATATAACCAGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051377.15 ENSMUST00000144416.2 |
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| CDS CAA 72 bp | AACACTGAGAAAAACTTCTTGGTAAATGTTCATCCGTaGAAGGAGGTTGATCGTCCTCATGGATTCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: NTEKNFLVNVHP*KEVDRPHGFSF Trigger: AAAACTGAATCCATGAGGACGATCAACCTCCTTCAACGGATGAACATTTACCAAGAAGTTTTTCTCAGTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051377.15 ENSMUST00000144416.2 |
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