Pregenerated sensors for DPY19L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000085576Ensembl transcript IDs: ENSMUST00000133010.4
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACCCATACACGTTCCCTTaGAACTCTAAAATGAACATC | + |
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Preference number: 2 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYPYTFP*NSKMNI Trigger: GATGTTCATTTTAGAGTTCCAAGGGAACGTGTATGG...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACAACAACTCACCTAGCTaGACTGAAAAGGAATTACTT | + |
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Preference number: 2 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYNNSPS*TEKELL Trigger: AAGTAATTCCTTTTCAGTCCAGCTAGGTGAGTTGTT...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| 3UTR-3UTR TCA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTGTAAGCTTGACAGACTaGCATTCAATGCAAATAATG | + |
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Preference number: 2 (lower is better) Translates to: HKLKLNEATTIIGFLRACVSLTD*HSMQIM Trigger: CATTATTTGCATTGAATGTCAGTCTGTCAAGCTTAC...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| 3UTR CCA 72 bp | TCAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTaGGCTGATCCATGGGTACTAGGGAAACCTGAAACA | + |
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Preference number: 3 (lower is better) Translates to: SEPVLVSMAEKV*ADPWVLGKPET Trigger: TGTTTCAGGTTTCCCTAGTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| 3UTR CCA 72 bp | CTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATaGGTACTAGGGAAACCTGAAACAACTCACCTAGCT | + |
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Preference number: 3 (lower is better) Translates to: LVSMAEKVWADP*VLGKPETTHLA Trigger: AGCTAGGTGAGTTGTTTCAGGTTTCCCTAGTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| 3UTR TCA 72 bp | GATATTTTCCATACACGTTCCCTTGGAACTCTAAAATaGACATCTGTTGGTGACTTAATCATTTATGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: DIFHTRSLGTLK*TSVGDLIIYEV Trigger: TACCTCATAAATGATTAAGTCACCAACAGATGTTCATTTTAGAGTTCCAAGGGAACGTGTATGGAAAATATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR CCA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACGCGCTTCGCTCCTGCTaGGGCTCCATGGTCGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYALRSC*GSMVAA Trigger: CGCAGCGACCATGGAGCCCCAGCAGGAGCGAAGCGC...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR TCA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACAGTGGTCCAGGAGAGTaGAGAGGAATTGGAAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYSGPGE*RGIGSG Trigger: ACCGCTTCCAATTCCTCTTCACTCTCCTGGACCACT...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR TCA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACTGGCCTCTCCATGATTaGAAAAGTAGCAGGCTACTG | + |
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Preference number: 4 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYWPLHD*KSSRLL Trigger: CAGTAGCCTGCTACTTTTTCAATCATGGAGAGGCCA...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR GCA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTGGGCTCCATGGTCGCTaGGCTCCACCTCCTCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: HKLKLNEATTIIGFLRACGLHGR*APPPPR Trigger: GCGAGGAGGAGGTGGAGCGCAGCGACCATGGAGCCC...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR CCA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTCCTGCTGGGGCTCCATaGTCGCTGCGCTCCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: HKLKLNEATTIIGFLRACPAGAP*SLRSTS Trigger: GGAGGTGGAGCGCAGCGACCATGGAGCCCCAGCAGG...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR TCA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACTCCCAAACATCAAAATaGAGCATAGGGCAACCGAAC | + |
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Preference number: 4 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYSQTSK*SIGQPN Trigger: GTTCGGTTGCCCTATGCTTCATTTTGATGTTTGGGA...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR GCA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACGTGAATGCCAGCAACTaGAAGGTGTGGAAAATCAAC | + |
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Preference number: 4 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYVNASN*KVWKIN Trigger: GTTGATTTTCCACACCTTGCAGTTGCTGGCATTCAC...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR CCA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACAGAGTGAAGAGGAATTaGAAGCGGTTAAGAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYRVKRN*KRLRRR Trigger: CCTTCTTCTTAACCGCTTCCAATTCCTCTTCACTCT...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR CCA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACTCACTCAGGCGAATATaGTCTGAAACACCACAGATT | + |
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Preference number: 4 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYSLRRI*SETPQI Trigger: AATCTGTGGTGTTTCAGACCATATTCGCCTGAGTGA...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR TCA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACTGTATGAGCTCTTCCTaGGGCAAGTTAGTAAATTCT | + |
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Preference number: 4 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYCMSSS*GKLVNS Trigger: AGAATTTACTAACTTGCCTCAGGAAGAGCTCATACA...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR GCA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACCTGAAAGTAATTTTGTaGGTTCAGACTTTGGATCCT | + |
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Preference number: 4 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYLKVIL*VQTLDP Trigger: AGGATCCAAAGTCTGAACGCACAAAATTACTTTCAG...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR GCA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACATATTTCAAGCATGCTaGAACCAGGTTTTGTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYIFQAC*NQVLFS Trigger: TGAGAACAAAACCTGGTTGCAGCATGCTTGAAATAT...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR CCA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTCCAAAGAGGGTCCTGTaGGAGAACCGATGCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: HKLKLNEATTIIGFLRACPKRVL*ENRCIC Trigger: GCAGATGCATCGGTTCTCCCACAGGACCCTCTTTGG...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR TCA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTAGATGGCAAGACCTGTaGATGCCAGCAACTGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: HKLKLNEATTIIGFLRACRWQDL*MPATAR Trigger: CCTTGCAGTTGCTGGCATTCACAGGTCTTGCCATCT...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR GCA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTGGCAAGACCTGTGAATaGCAGCAACTGCAAGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: HKLKLNEATTIIGFLRACGKTCE*QQLQGV Trigger: CACACCTTGCAGTTGCTGGCATTCACAGGTCTTGCC...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR TCA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTATCAGACCTCCTAACTaGCTCCCACTCAGGTATGTA | + |
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Preference number: 4 (lower is better) Translates to: HKLKLNEATTIIGFLRACIRPPN*LPLRYV Trigger: TACATACCTGAGTGGGAGTCAGTTAGGAGGTCTGAT...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR TCA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTGATACCAGTAGGCTATaGCTACCTCTGGGTAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: HKLKLNEATTIIGFLRACDTSRL*LPLGKD Trigger: ATCTTTACCCAGAGGTAGTCATAGCCTACTGGTATC...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR TCA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTCTGTACATACTATTCTaGAACACTGTGGTAAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: HKLKLNEATTIIGFLRACLYILF*NTVVKY Trigger: GTACTTTACCACAGTGTTTCAGAATAGTATGTACAG...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR GCA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTATTAAGTGTAACCAGTaGAAAATCCCCACAAAGATA | + |
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Preference number: 4 (lower is better) Translates to: HKLKLNEATTIIGFLRACIKCNQ*KIPTKI Trigger: TATCTTTGTGGGGATTTTGCACTGGTTACACTTAAT...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR GCA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTAAAACTGAAGTTCAGTaGCTCCCAATTTTTGGATTT | + |
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Preference number: 4 (lower is better) Translates to: HKLKLNEATTIIGFLRACKTEVQ*LPIFGF Trigger: AAATCCAAAAATTGGGAGGCACTGAACTTCAGTTTT...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR GCA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTATTTCTCACTTCTACTaGAGATTTTCGACTATACAC | + |
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Preference number: 4 (lower is better) Translates to: HKLKLNEATTIIGFLRACISHFY*RFSTIH Trigger: GTGTATAGTCGAAAATCTGCAGTAGAAGTGAGAAAT...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS CCA 90 bp | AGCAACGACCACTTCGTTCTCTCCTGGGGCGCGCTTCGCTCCTGCTaGGGCTCCATGGTCGCTGCGCTCCACCTCCTCCTCGCCTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SNDHFVLSWGALRSC*GSMVAALHLLLACP Trigger: GGGGCAGGCGAGGAGGAGGTGGAGCGCAGCGACCATGGAGCCCCAGCAGGAGCGAAGCGCGCCCCAGGAGAGAACGAAGTGGTCGTTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS GCA 90 bp | TGCAGCAACGACCACTTCGTTCTCTCCTGGGGCGCGCTTCGCTCCTaGTGGGGCTCCATGGTCGCTGCGCTCCACCTCCTCCTCGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: CSNDHFVLSWGALRS*WGSMVAALHLLLAC Trigger: GCAGGCGAGGAGGAGGTGGAGCGCAGCGACCATGGAGCCCCAGCAGGAGCGAAGCGCGCCCCAGGAGAGAACGAAGTGGTCGTTGCTGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR CAA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACTTGTGCGTTCAGACTTaGGATCCTCCGCGCCGCGTA | + |
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Preference number: 5 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYLCVQT*DPPRRV Trigger: TACGCGGCGCGGAGGATCCAAAGTCTGAACGCACAA...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR CAA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTCCCCGTGCAGGAGGATaGTGGCCTGTCGGAGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: HKLKLNEATTIIGFLRACPRAGG*WPVGAP Trigger: GGGAGCTCCGACAGGCCACAATCCTCCTGCACGGGG...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR CAA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACTCTCAGCGGAGTCGCTaGTTCCATGAAGTCAAATTC | + |
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Preference number: 5 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYSQRSR*FHEVKF Trigger: GAATTTGACTTCATGGAACAAGCGACTCCGCTGAGA...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR CAA 90 bp | CAGAGCCTGTGCTCGTTTCCATGGCTGAGAAGGTCTGGGCTGATCCATGGGTACCAGCTGAAAGTAATTTaGTGCGTTCAGACTTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: QSLCSFPWLRRSGLIHGYQLKVI*CVQTLD Trigger: ATCCAAAGTCTGAACGCACAAAATTACTTTCAGCTG...GTACCCATGGATCAGCCCAGACCTTCTCAGCCATGGAAACGAGCACAGGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR CAA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTTGCTGCAACCAGGTTTaGTTCTCACGACACACCATG | + |
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Preference number: 5 (lower is better) Translates to: HKLKLNEATTIIGFLRACCCNQV*FSRHTM Trigger: CATGGTGTGTCGTGAGAACAAAACCTGGTTGCAGCA...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS GCA 90 bp | TTCAACCGCATGATTAAGATGGCAAGACCTGTGAATGCCAGCAACTaGAAGGTGTGGAAAATCAACTCAGCGTTGTCAAGAAGCTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: FNRMIKMARPVNASN*KVWKINSALSRSCF Trigger: AAAACAGCTTCTTGACAACGCTGAGTTGATTTTCCACACCTTGCAGTTGCTGGCATTCACAGGTCTTGCCATCTTAATCATGCGGTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR CAA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTGAGAGTGAAGAGGAATaGGAAGCGGTTAAGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: HKLKLNEATTIIGFLRACESEEE*EAVKKK Trigger: CTTCTTCTTAACCGCTTCCAATTCCTCTTCACTCTC...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR CAA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTTTGCACAACCTTGTATaGACATCATTGTCAGAATGC | + |
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Preference number: 5 (lower is better) Translates to: HKLKLNEATTIIGFLRACLHNLV*TSLSEC Trigger: GCATTCTGACAATGATGTCAATACAAGGTTGTGCAA...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS-3UTR CAA 90 bp | CATAAACTAAAACTGAATGAGGCTACCACCATCATCGGATTTCTCAGAGCCTGTAAAATCAACTCAGCGTaGTCAAGAAGCTGTTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: HKLKLNEATTIIGFLRACKINSA*SRSCFL Trigger: AAGAAAACAGCTTCTTGACAACGCTGAGTTGATTTT...ACAGGCTCTGAGAAATCCGATGATGGTGGTAGCCTCATTCAGTTTTAGTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS GCA 72 bp | TGGTCGCTGCGCTCCACCTCCTCCTCGCCTGCCCCGTaGAGGAGGATTGTGGCCTGTCGGAGCTCCCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: WSLRSTSSSPAP*RRIVACRSSLP Trigger: GGGAAGGGAGCTCCGACAGGCCACAATCCTCCTGCACGGGGCAGGCGAGGAGGAGGTGGAGCGCAGCGACCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS GCA 72 bp | AGGGTCCTGTGGGAGAACCGATGCATCTGCAGTGCCTaGACCTTTTCGCGAAAGTGGTCCAGGAGAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: RVLWENRCICSA*TFSRKWSRRVK Trigger: CTTCACTCTCCTGGACCACTTTCGCGAAAAGGTGCAGGCACTGCAGATGCATCGGTTCTCCCACAGGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS CAA 90 bp | CTTGGCGACCTCTTCCAGCTGAAAGTAATTTTGTGCGTTCAGACTTaGGATCCTCCGCGCCGCGTAGTTGCGAGCACCCGAGGGCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LGDLFQLKVILCVQT*DPPRRVVASTRGQF Trigger: AAACTGCCCTCGGGTGCTCGCAACTACGCGGCGCGGAGGATCCAAAGTCTGAACGCACAAAATTACTTTCAGCTGGAAGAGGTCGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS CCA 72 bp | ATCCCCACAAAGATAGCTAGGCCAAAGAGGGTCCTGTaGGAGAACCGATGCATCTGCAGTGCCTGCACCTTT | + |
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Preference number: 6 (lower is better) Translates to: IPTKIARPKRVL*ENRCICSACTF Trigger: AAAGGTGCAGGCACTGCAGATGCATCGGTTCTCCCACAGGACCCTCTTTGGCCTAGCTATCTTTGTGGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS CAA 72 bp | CTCTTCCAGCTGAAAGTAATTTTGTGCGTTCAGACTTaGGATCCTCCGCGCCGCGTAGTTGCGAGCACCCGA | + |
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Preference number: 6 (lower is better) Translates to: LFQLKVILCVQT*DPPRRVVASTR Trigger: TCGGGTGCTCGCAACTACGCGGCGCGGAGGATCCAAAGTCTGAACGCACAAAATTACTTTCAGCTGGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS GCA 72 bp | GAGCTTGGCGACCTCTTCCAGCTGAAAGTAATTTTGTaGGTTCAGACTTTGGATCCTCCGCGCCGCGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: ELGDLFQLKVIL*VQTLDPPRRVV Trigger: AACTACGCGGCGCGGAGGATCCAAAGTCTGAACGCACAAAATTACTTTCAGCTGGAAGAGGTCGCCAAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS CCA 72 bp | CGATGCATCTGCAGTGCCTGCACCTTTTCGCGAAAGTaGTCCAGGAGAGTGAAGAGGAATTGGAAGCGGTTA | + |
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Preference number: 6 (lower is better) Translates to: RCICSACTFSRK*SRRVKRNWKRL Trigger: TAACCGCTTCCAATTCCTCTTCACTCTCCTGGACCACTTTCGCGAAAAGGTGCAGGCACTGCAGATGCATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS CCA 72 bp | TTTTCGCGAAAGTGGTCCAGGAGAGTGAAGAGGAATTaGAAGCGGTTAAGAAGAAGGAGCTTGGCGACCTCT | + |
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Preference number: 6 (lower is better) Translates to: FSRKWSRRVKRN*KRLRRRSLATS Trigger: AGAGGTCGCCAAGCTCCTTCTTCTTAACCGCTTCCAATTCCTCTTCACTCTCCTGGACCACTTTCGCGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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| CDS CCA 72 bp | ATGGCAAGACCTGTGAATGCCAGCAACTGCAAGGTGTaGAAAATCAACTCAGCGTTGTCAAGAAGCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: MARPVNASNCKV*KINSALSRSCF Trigger: AAAACAGCTTCTTGACAACGCTGAGTTGATTTTCCACACCTTGCAGTTGCTGGCATTCACAGGTCTTGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133010.4 |
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