Pregenerated sensors for DPY19L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043067Ensembl transcript IDs: ENSMUST00000115277.9, ENSMUST00000142064.8, ENSMUST00000170356.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAACTAAGCATCAGATGAGGAAGCCTGGCCACAGTCTGCAACAGTaGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: KTKHQMRKPGHSLQQ*EWQSPGSFREGGPG Trigger: GCCAGGGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGTGGCCAGGCTTCCTCATCTGATGCTTAGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR CCA 90 bp | GAAGAAGGCAGAAAGAACAGCTCTTCCTTCCGTGGCTGTCAGGACTaGAGTGGGCACCGGAAGCCATCCCTGAGGGTTCAGGTCTCAAGG | + |
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Preference number: 1 (lower is better) Translates to: EEGRKNSSSFRGCQD*SGHRKPSLRVQVSR Trigger: CCTTGAGACCTGAACCCTCAGGGATGGCTTCCGGTGCCCACTCCAGTCCTGACAGCCACGGAAGGAAGAGCTGTTCTTTCTGCCTTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR TCA 90 bp | CTTACTGAGGCCACACTCCTCAGTTGCAAGTGCTGTCTTTGCAGGTaGCCAATGTCCCCCAGACAAGCTTGTCCTTCGGCTCTGGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: LTEATLLSCKCCLCR*PMSPRQACPSALGR Trigger: TCTTCCCAGAGCCGAAGGACAAGCTTGTCTGGGGGACATTGGTCACCTGCAAAGACAGCACTTGCAACTGAGGAGTGTGGCCTCAGTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR CCA 90 bp | GGAAAAGAAACCAGCCTGCGTGGGGAGAAACACACAGCACATAGCTaGAAACTTAAGGAACTGGTCCTCGCCACCATACCCAGGAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: GKETSLRGEKHTAHS*KLKELVLATIPRSL Trigger: CAGACTCCTGGGTATGGTGGCGAGGACCAGTTCCTTAAGTTTCCAGCTATGTGCTGTGTGTTTCTCCCCACGCAGGCTGGTTTCTTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCGTGGCTGTCAGGACTaGAGTGGGCACCGGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: TVCNSGNGSPRAASGREARGCQD*SGHRKP Trigger: TGGCTTCCGGTGCCCACTCCAGTCCTGACAGCCACG...GGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCAGCTCTTCCTTCCGTaGCTGTCAGGACTGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: TVCNSGNGSPRAASGREAQLFLP*LSGLEW Trigger: CCACTCCAGTCCTGACAGCCACGGAAGGAAGAGCTG...GGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCAACCACGCCTGGACTaGGAGCTGAGACAGTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: TVCNSGNGSPRAASGREAQPRLD*ELRQCS Trigger: TGAACACTGTCTCAGCTCTCAGTCCAGGCGTGGTTG...GGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGACACAGGGAGGGAGGCCCTaGCTGGTGAGGCTGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LLSSHPCCWPTRTAHTLTQGGRP*LVRLAP Trigger: AGGAGCCAGCCTCACCAGCCAGGGCCTCCCTCCCTG...TGTCAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR CCA 90 bp | CATCAGATGAGGAAGCCTGGCCACAGTCTGCAACAGTGGGAATGGCAGTCCCCGAGAAACCAGCCTGCGTaGGGAGAAACACACAGCACA | + |
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Preference number: 2 (lower is better) Translates to: HQMRKPGHSLQQWEWQSPRNQPA*GETHST Trigger: TGTGCTGTGTGTTTCTCCCCACGCAGGCTGGTTTCT...CGGGGACTGCCATTCCCACTGTTGCAGACTGTGGCCAGGCTTCCTCATCTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR-3UTR TCA 90 bp | GCCACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGTCAGACTGACAAACTaGCCAAATCAAATGTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: ATVCNSGNGSPRAASGREVRLTN*PNQMFA Trigger: GGCAAACATTTGATTTGGTCAGTTTGTCAGTCTGAC...CTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGGGGCTGCAGAAGAGCTaGGGAGCAGGCAGGGCATGT | + |
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Preference number: 2 (lower is better) Translates to: ALAQTHPFVFSSMLLAYQGLQKS*GAGRAC Trigger: ACATGCCCTGCCTGCTCCGCAGCTCTTCTGCAGCCC...CTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGACAGGGCTGCAGAAGAGCTaGGGAGCAGGCAGGGCATGT | + |
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Preference number: 2 (lower is better) Translates to: LLSSHPCCWPTRTAHTLTGLQKS*GAGRAC Trigger: ACATGCCCTGCCTGCTCCGCAGCTCTTCTGCAGCCC...TGTCAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGCGTGGCTGTCAGGACTaGAGTGGGCACCGGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: ALAQTHPFVFSSMLLAYQRGCQD*SGHRKP Trigger: TGGCTTCCGGTGCCCACTCCAGTCCTGACAGCCACG...CTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGACACAGCTCTTCCTTCCGTaGCTGTCAGGACTGGAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LLSSHPCCWPTRTAHTLTQLFLP*LSGLEW Trigger: CCACTCCAGTCCTGACAGCCACGGAAGGAAGAGCTG...TGTCAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGACAGCCACACTCCTCAGTTaGAAGTGCTGTCTTTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LLSSHPCCWPTRTAHTLTATLLS*KCCLCR Trigger: CCTGCAAAGACAGCACTTGCAACTGAGGAGTGTGGC...TGTCAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAGAAACCAGCCTGCGTaGGGAGAAACACACAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: ALAQTHPFVFSSMLLAYQRNQPA*GETHST Trigger: TGTGCTGTGTGTTTCTCCCCACGCAGGCTGGTTTCT...CTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGACAGGAAACTTAAGGAACTaGTCCTCGCCACCATACCCA | + |
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Preference number: 2 (lower is better) Translates to: LLSSHPCCWPTRTAHTLTGNLRN*SSPPYP Trigger: TGGGTATGGTGGCGAGGACCAGTTCCTTAAGTTTCC...TGTCAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGACAGGCATTTTACAGGCAGGAAACACTTaGTTCACGAGAGCAACAAAC | + |
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Preference number: 2 (lower is better) Translates to: SHPCCWPTRTAHTLTGILQAGNT*FTRATN Trigger: GTTTGTTGCTCTCGTGAATCAAGTGTTTCCTGCCTG...TAAAATGCCTGTCAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR-3UTR CCA 90 bp | ATCGCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCCATACCCAGGAGTCTaGGTAACAACAGGCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: IALAQTHPFVFSSMLLAYPYPGV*VTTGRK Trigger: TTTCCTGCCTGTTGTTACCCAGACTCCTGGGTATGG...GTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCCACACAGCACATAGCTaGAAACTTAAGGAACTGGTC | + |
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Preference number: 2 (lower is better) Translates to: AQTHPFVFSSMLLAYQNSHTAHS*KLKELV Trigger: GACCAGTTCCTTAAGTTTCCAGCTATGTGCTGTGTG...GCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCAATGTTTCCCAGCATGTaGACTGGCTCTAACAGTATT | + |
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Preference number: 2 (lower is better) Translates to: LRHILLSSHPCCWPTRTAMFPSM*TGSNSI Trigger: AATACTGTTAGAGCCAGTTCACATGCTGGGAAACAT...TGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAATACTGCTCCATGTTaGCATAAAAGTGTTTCCGCC | + |
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Preference number: 2 (lower is better) Translates to: ALAQTHPFVFSSMLLAYQNTAPC*HKSVSA Trigger: GGCGGAAACACTTTTATGGCAACATGGAGCAGTATT...CTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCAAAAAATGGGAAAGACTaGGAGCATACTCACTCTACA | + |
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Preference number: 2 (lower is better) Translates to: LRHILLSSHPCCWPTRTAKNGKD*EHTHST Trigger: TGTAGAGTGAGTATGCTCTCAGTCTTTCCCATTTTT...TGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAATACAAGCAAAGCTTaGTGCTGGAGTTACATTACG | + |
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Preference number: 2 (lower is better) Translates to: ALAQTHPFVFSSMLLAYQNTSKA*CWSYIT Trigger: CGTAATGTAACTCCAGCAGCAAGCTTTGCTTGTATT...CTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGATCTGTCATGACCCATaGTGTATTTCTAAACAGATG | + |
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Preference number: 2 (lower is better) Translates to: ALAQTHPFVFSSMLLAYQICHDP*CISKQM Trigger: CATCTGTTTAGAAATACATCATGGGTCATGACAGAT...CTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCAGAGTTCGTAAAAGCTTaGGAACTAAAACTAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: LRHILLSSHPCCWPTRTAEFVKA*ELKLSI Trigger: GATGCTTAGTTTTAGTTCCCAAGCTTTTACGAACTC...TGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR CAA 90 bp | CCAAGGCCGCATTTCCAAGCTGACTTGACTAAATACAAGCAAAGCTaGCTGCTGGAGTTACATTACGACATACTGTTTGTTACAAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: PRPHFQADLTKYKQS*LLELHYDILFVTKG Trigger: ACCTTTTGTAACAAACAGTATGTCGTAATGTAACTCCAGCAGCAAGCTTTGCTTGTATTTAGTCAAGTCAGCTTGGAAATGCGGCCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR CCA 72 bp | ATGAGGAAGCCTGGCCACAGTCTGCAACAGTGGGAATaGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: MRKPGHSLQQWE*QSPGSFREGGP Trigger: AGGGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGTGGCCAGGCTTCCTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR CAA 90 bp | CATCAGATGAGGAAGCCTGGCCACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCCACACTCCTCAGTaGCAAGTGCTGTCTTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: HQMRKPGHSLQQWEWQSPGHTPQ*QVLSLQ Trigger: CTGCAAAGACAGCACTTGCAACTGAGGAGTGTGGCC...CGGGGACTGCCATTCCCACTGTTGCAGACTGTGGCCAGGCTTCCTCATCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR GCA 72 bp | CCTAACTGCTGTATCCACACAGCAGCCATATTGGGCTaGAGAAGAGCTGCGGAGCAGGCAGGGCATGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: PNCCIHTAAILG*RRAAEQAGHVS Trigger: GGACACATGCCCTGCCTGCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCTGTGTGGATACAGCAGTTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR CCA 72 bp | AGAAAGAACAGCTCTTCCTTCCGTGGCTGTCAGGACTaGAGTGGGCACCGGAAGCCATCCCTGAGGGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: RKNSSSFRGCQD*SGHRKPSLRVQ Trigger: CTGAACCCTCAGGGATGGCTTCCGGTGCCCACTCCAGTCCTGACAGCCACGGAAGGAAGAGCTGTTCTTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR TCA 72 bp | AGTGTTTCCGCCACACTGCTACTAGATGTGCTGGACTaGGAATGCAGTGGGCCCCAAGGCCGCATTTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: SVSATLLLDVLD*ECSGPQGRISK Trigger: CTTGGAAATGCGGCCTTGGGGCCCACTGCATTCTCAGTCCAGCACATCTAGTAGCAGTGTGGCGGAAACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR CCA 72 bp | ACCAGCCTGCGTGGGGAGAAACACACAGCACATAGCTaGAAACTTAAGGAACTGGTCCTCGCCACCATACCC | + |
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Preference number: 3 (lower is better) Translates to: TSLRGEKHTAHS*KLKELVLATIP Trigger: GGGTATGGTGGCGAGGACCAGTTCCTTAAGTTTCCAGCTATGTGCTGTGTGTTTCTCCCCACGCAGGCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR CCA 72 bp | AAAACCCTAACTGCTGTATCCACACAGCAGCCATATTaGGCTGCAGAAGAGCTGCGGAGCAGGCAGGGCATG | + |
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Preference number: 3 (lower is better) Translates to: KTLTAVSTQQPY*AAEELRSRQGM Trigger: CATGCCCTGCCTGCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCTGTGTGGATACAGCAGTTAGGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR CCA 72 bp | GACCAATGTCCCCCAGACAAGCTTGTCCTTCGGCTCTaGGAAGAAGGCAGAAAGAACAGCTCTTCCTTCCGT | + |
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Preference number: 3 (lower is better) Translates to: DQCPPDKLVLRL*EEGRKNSSSFR Trigger: ACGGAAGGAAGAGCTGTTCTTTCTGCCTTCTTCCCAGAGCCGAAGGACAAGCTTGTCTGGGGGACATTGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR CAA 90 bp | TGTATCCACACAGCAGCCATATTGGGCTGCAGAAGAGCTGCGGAGCAGGCAGGGAGACTTTCTAAAGGTTaGCGCTCTGAGTTAGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: CIHTAAILGCRRAAEQAGRLSKG*RSELVA Trigger: TGCCACTAACTCAGAGCGCAAACCTTTAGAAAGTCT...CCCTGCCTGCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCTGTGTGGATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR CCA 72 bp | CTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTaGCCTACCAGAACAGCACACACTCTGACAGGCATT | + |
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Preference number: 3 (lower is better) Translates to: LRHILLSSHPCC*PTRTAHTLTGI Trigger: AATGCCTGTCAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| 3UTR-3UTR CAA 90 bp | ATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGAGACTTTCTAAAGGTTaGCGCTCTGAGTTAGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: ILLSSHPCCWPTRTAHTLRLSKG*RSELVA Trigger: TGCCACTAACTCAGAGCGCAAACCTTTAGAAAGTCT...CAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115277.9 ENSMUST00000170356.2 |
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| 3UTR GCA 72 bp | ATTGTCAGCTACATAAAATCTAATACTGCTCCATGTTaGCATAAAAGTGTTTCCGCCACACTGCTACTAGAT | + |
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Preference number: 3 (lower is better) Translates to: IVSYIKSNTAPC*HKSVSATLLLD Trigger: ATCTAGTAGCAGTGTGGCGGAAACACTTTTATGGCAACATGGAGCAGTATTAGATTTTATGTAGCTGACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR TCA 90 bp | CTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCTGGCAGAAGCACAGCACTGTaGCCACGCCTCCCAATCGGC | + |
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Preference number: 4 (lower is better) Translates to: LQQWEWQSPGSFREGGPGRSTAL*PRLPIG Trigger: GCCGATTGGGAGGCGTGGTCACAGTGCTGTGCTTCT...GCCAGGGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR TCA 90 bp | CAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCTGGCTGGCTCCCTTTCCAGCGTTaGGAGGTGAGAGAAATGCCG | + |
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Preference number: 4 (lower is better) Translates to: QQWEWQSPGSFREGGPGWLPFQR*EVREMP Trigger: CGGCATTTCTCTCACCTCTCAACGCTGGAAAGGGAG...CCAGCCAGGGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | CAGGTGACCAATGTCCCCCAGACAAGCTTGTCCTTCGGCTCTGGGAAGAAGGCACCGCGTCCCGGTGCTTaGTCCGCGCCTGCAGGACCA | + |
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Preference number: 4 (lower is better) Translates to: QVTNVPQTSLSFGSGKKAPRPGA*SAPAGP Trigger: TGGTCCTGCAGGCGCGGAGCAAGCACCGGGACGCGG...TGCCTTCTTCCCAGAGCCGAAGGACAAGCTTGTCTGGGGGACATTGGTCACCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | GGAAGAAGGCAGAAAGAACAGCTCTTCCTTCCGTGGCTGTCAGGACTGGAGTGGGGAGCCGCGTCCCGGTaGTTGCTCCGCGCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GRRQKEQLFLPWLSGLEWGAASR*LLRACR Trigger: CCTGCAGGCGCGGAGCAAGCACCGGGACGCGGCTCC...CCACTCCAGTCCTGACAGCCACGGAAGGAAGAGCTGTTCTTTCTGCCTTCTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | GCCACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGGTGGGCATGGCGCCTaGAAACACTGCATCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ATVCNSGNGSPRAASGREGGHGA*KHCIWF Trigger: AAACCAGATGCAGTGTTTGCAGGCGCCATGCCCACC...CTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | ACTAAGCATCAGATGAGGAAGCCTGGCCACAGTCTGCAACAGTGGGAATGGCAGCCGCGTCCCGGTGCTTaGTCCGCGCCTGCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: TKHQMRKPGHSLQQWEWQPRPGA*SAPAGP Trigger: TGGTCCTGCAGGCGCGGAGCAAGCACCGGGACGCGG...CTGCCATTCCCACTGTTGCAGACTGTGGCCAGGCTTCCTCATCTGATGCTTAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CCA 90 bp | CTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCTGGCTGCATCTTCATAATGTaGGTGGTTCACCACGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LQQWEWQSPGSFREGGPGCIFIM*VVHHGS Trigger: CGACCCGTGGTGAACCACCCACATTATGAAGATGCA...GCCAGGGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CCA 90 bp | CAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCTGGCTGGTGCATCTTCATAATGTaGGTGGTTCACCACGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QQWEWQSPGSFREGGPGWCIFIM*VVHHGS Trigger: CGACCCGTGGTGAACCACCCACATTATGAAGATGCA...CCAGCCAGGGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | CTTCCGTGGCTGTCAGGACTGGAGTGGGCACCGGAAGCCATCCCTGAGGGTTCAACGAACTGGGCAAACTaGCAGGGCAGCATGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPWLSGLEWAPEAIPEGSTNWAN*QGSMKS Trigger: GCTCTTCATGCTGCCCTGGCAGTTTGCCCAGTTCGT...TGAACCCTCAGGGATGGCTTCCGGTGCCCACTCCAGTCCTGACAGCCACGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | CAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCTGGCTGGTCGTTTTCAAAGAGGTaGGTTATGTGGCTCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQWEWQSPGSFREGGPGWSFSKR*VMWLQC Trigger: GCACTGGAGCCACATAACGCACCTCTTTGAAAACGA...CCAGCCAGGGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | CAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCTGGCTGGGTCACAAGCAACATCTaGAGCACAAGGAATGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QQWEWQSPGSFREGGPGWVTSNI*STRNGY Trigger: ATACCCATTCCTTGTGCTGCAGATGTTGCTTGTGAC...CCAGCCAGGGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | GCCACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGACAACAGCACCGGGATaGACTTTGCCAAAGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ATVCNSGNGSPRAASGRETTAPG*TLPKSH Trigger: ATGGCTCTTTGGCAAAGTGCATCCCGGTGCTGTTGT...CTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | TCAGATGAGGAAGCCTGGCCACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGGGTGGGCATGGCGCCTaGAAACACTGCATCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SDEEAWPQSATVGMAVPGGGHGA*KHCIWF Trigger: AAACCAGATGCAGTGTTTGCAGGCGCCATGCCCACC...CCCGGGGACTGCCATTCCCACTGTTGCAGACTGTGGCCAGGCTTCCTCATCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | ATCGCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACGGAGCCGCGTCCCGGTaGTTGCTCCGCGCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IALAQTHPFVFSSMLLAYGAASR*LLRACR Trigger: CCTGCAGGCGCGGAGCAAGCACCGGGACGCGGCTCC...GTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGCGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCACAGCCCCATTTCAGTaGGGAAAGCCATCTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVCNSGNGSPRAASGREATAPFQ*GKPSPF Trigger: AAAGGGAGATGGCTTTCCGCACTGAAATGGGGCTGT...GGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCGTGGCTGTCAGGACTGGAGTGGGCACCGGAAGCCATCCCTGAGGGTTCAGTTGGAGATGCAGAGTaGAATCAGACTCCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPWLSGLEWAPEAIPEGSVGDAE*NQTPSA Trigger: TGCAGAGGGAGTCTGATTGCACTCTGCATCTCCAAC...TGAACCCTCAGGGATGGCTTCCGGTGCCCACTCCAGTCCTGACAGCCACGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | CATCAGATGAGGAAGCCTGGCCACAGTCTGCAACAGTGGGAATGGCAGTCCCCGACGAACTGGGCAAACTaGCAGGGCAGCATGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HQMRKPGHSLQQWEWQSPTNWAN*QGSMKS Trigger: GCTCTTCATGCTGCCCTGGCAGTTTGCCCAGTTCGT...CGGGGACTGCCATTCCCACTGTTGCAGACTGTGGCCAGGCTTCCTCATCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCGAACTGGGGCTTCATTaGCAGCATGCCCCAAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVCNSGNGSPRAASGREAELGLH*QHAPNN Trigger: ATTATTTGGGGCATGCTGGCAATGAAGCCCCAGTTC...GGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | CTTCCGTGGCTGTCAGGACTGGAGTGGGCACCGGAAGCCATCCCTGAGGGTTCAACAACAGCACCGGGATaGACTTTGCCAAAGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPWLSGLEWAPEAIPEGSTTAPG*TLPKSH Trigger: ATGGCTCTTTGGCAAAGTGCATCCCGGTGCTGTTGT...TGAACCCTCAGGGATGGCTTCCGGTGCCCACTCCAGTCCTGACAGCCACGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR CCA 90 bp | GAGGCCCTGGCTGGTGAGGCTGGCTCCTTACTGAGGCCACACTCCTCAGTTGCATGCATCTTCATAATGTaGGTGGTTCACCACGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: EALAGEAGSLLRPHSSVACIFIM*VVHHGS Trigger: CGACCCGTGGTGAACCACCCACATTATGAAGATGCA...TGCAACTGAGGAGTGTGGCCTCAGTAAGGAGCCAGCCTCACCAGCCAGGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR TCA 90 bp | AGCAGCCATATTGGGCTGCAGAAGAGCTGCGGAGCAGGCAGGGCATGTGTCCCTCACAAGGAATGGGTATaGGAAGCTTTCTCGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSHIGLQKSCGAGRACVPHKEWV*EAFSER Trigger: CCTCTCCGAGAAAGCTTCTCATACCCATTCCTTGTG...AGGGACACATGCCCTGCCTGCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR TCA 90 bp | GGTGAGGCTGGCTCCTTACTGAGGCCACACTCCTCAGTTGCAAGTGCTGTCTTTACTGCCAGGGCAGCATaGAGAGCACGTTGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GEAGSLLRPHSSVASAVFTARAA*RARWRC Trigger: GCATCTCCAACGTGCTCTTCATGCTGCCCTGGCAGT...AAAGACAGCACTTGCAACTGAGGAGTGTGGCCTCAGTAAGGAGCCAGCCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR TCA 90 bp | CAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCTGGCTGGAATAATGATGCAATCTaGGTAAGAAGCACGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QQWEWQSPGSFREGGPGWNNDAI*VRSTNW Trigger: CCAGTTCGTGCTTCTTACTCAGATTGCATCATTATT...CCAGCCAGGGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | CTTCCGTGGCTGTCAGGACTGGAGTGGGCACCGGAAGCCATCCCTGAGGGTTCAGAACTGGGGCTTCATTaGCAGCATGCCCCAAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPWLSGLEWAPEAIPEGSELGLH*QHAPNN Trigger: ATTATTTGGGGCATGCTGGCAATGAAGCCCCAGTTC...TGAACCCTCAGGGATGGCTTCCGGTGCCCACTCCAGTCCTGACAGCCACGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | CTAACTGCTGTATCCACACAGCAGCCATATTGGGCTGCAGAAGAGCTGCGGAGCAGAGAGCTTCACACTTaGCATGGTGGGCATGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTAVSTQQPYWAAEELRSRELHT*HGGHGA Trigger: GGCGCCATGCCCACCATGGCAAGTGTGAAGCTCTCT...GCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCTGTGTGGATACAGCAGTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | GGTGAGGCTGGCTCCTTACTGAGGCCACACTCCTCAGTTGCAAGTGCTGTCTTTAGAGAGCTTCACACTTaGCATGGTGGGCATGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GEAGSLLRPHSSVASAVFRELHT*HGGHGA Trigger: GGCGCCATGCCCACCATGGCAAGTGTGAAGCTCTCT...AAAGACAGCACTTGCAACTGAGGAGTGTGGCCTCAGTAAGGAGCCAGCCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR CCA 90 bp | ACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCTTCATTCTTAGGAACTaGGGCTTCATTGCCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TVCNSGNGSPRAASGREAFILRN*GFIASM Trigger: CATGCTGGCAATGAAGCCCCAGTTCCTAAGAATGAA...GGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR CCA 90 bp | ACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCATCCAAACAGCTGTCTaGAACAGATCAAGGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVCNSGNGSPRAASGREAIQTAV*NRSRMP Trigger: TGGCATCCTTGATCTGTTCCAGACAGCTGTTTGGAT...GGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR TCA 90 bp | GCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCAGAAGCACAGCACTGTaGCCACGCCTCCCAATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AQTHPFVFSSMLLAYQNSRSTAL*PRLPIG Trigger: GCCGATTGGGAGGCGTGGTCACAGTGCTGTGCTTCT...GCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR TCA 90 bp | CAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCTGGCTGGTCTTCTTATGCACCATaGCTCTTCCAAAATGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QQWEWQSPGSFREGGPGWSSYAP*LFQNVV Trigger: TACTACATTTTGGAAGAGTCATGGTGCATAAGAAGA...CCAGCCAGGGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | TGTATCCACACAGCAGCCATATTGGGCTGCAGAAGAGCTGCGGAGCAGGCAGGGGTTGGAGATGCAGAGTaGAATCAGACTCCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CIHTAAILGCRRAAEQAGVGDAE*NQTPSA Trigger: TGCAGAGGGAGTCTGATTGCACTCTGCATCTCCAAC...CCCTGCCTGCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCTGTGTGGATACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | GAGGCCCTGGCTGGTGAGGCTGGCTCCTTACTGAGGCCACACTCCTCAGTTGCAGAGCATCATCTGCAATaGCAAAGATCCTGGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EALAGEAGSLLRPHSSVAEHHLQ*QRSWKS Trigger: TGACTTCCAGGATCTTTGGCATTGCAGATGATGCTC...TGCAACTGAGGAGTGTGGCCTCAGTAAGGAGCCAGCCTCACCAGCCAGGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | ACTAAGCATCAGATGAGGAAGCCTGGCCACAGTCTGCAACAGTGGGAATGGCAGAGAGAGCTTCACACTTaGCATGGTGGGCATGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKHQMRKPGHSLQQWEWQRELHT*HGGHGA Trigger: GGCGCCATGCCCACCATGGCAAGTGTGAAGCTCTCT...CTGCCATTCCCACTGTTGCAGACTGTGGCCAGGCTTCCTCATCTGATGCTTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR TCA 90 bp | GAAGGCAGAAAGAACAGCTCTTCCTTCCGTGGCTGTCAGGACTGGAGTGGGCACCACAAGGAATGGGTATaGGAAGCTTTCTCGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGRKNSSSFRGCQDWSGHHKEWV*EAFSER Trigger: CCTCTCCGAGAAAGCTTCTCATACCCATTCCTTGTG...GTGCCCACTCCAGTCCTGACAGCCACGGAAGGAAGAGCTGTTCTTTCTGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | AGCAGCCATATTGGGCTGCAGAAGAGCTGCGGAGCAGGCAGGGCATGTGTCCCTGTCACAAGCAACATCTaGAGCACAAGGAATGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSHIGLQKSCGAGRACVPVTSNI*STRNGY Trigger: ATACCCATTCCTTGTGCTGCAGATGTTGCTTGTGAC...AGGGACACATGCCCTGCCTGCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | GCCACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGAATATGAGCATCATCTaGAATGCCAAAGATCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ATVCNSGNGSPRAASGRENMSII*NAKDPG Trigger: TCCAGGATCTTTGGCATTGCAGATGATGCTCATATT...CTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | ACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCAATATGAGCATCATCTaGAATGCCAAAGATCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVCNSGNGSPRAASGREANMSII*NAKDPG Trigger: TCCAGGATCTTTGGCATTGCAGATGATGCTCATATT...GGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR GCA 90 bp | CAGGTGACCAATGTCCCCCAGACAAGCTTGTCCTTCGGCTCTGGGAAGAAGGCAACAGCCCCATTTCAGTaGGGAAAGCCATCTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVTNVPQTSLSFGSGKKATAPFQ*GKPSPF Trigger: AAAGGGAGATGGCTTTCCGCACTGAAATGGGGCTGT...TGCCTTCTTCCCAGAGCCGAAGGACAAGCTTGTCTGGGGGACATTGGTCACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | TCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGACAGGCATTTTAACTGCCAGGGCAGCATaGAGAGCACGTTGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SHPCCWPTRTAHTLTGILTARAA*RARWRC Trigger: GCATCTCCAACGTGCTCTTCATGCTGCCCTGGCAGT...TAAAATGCCTGTCAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGACTGCCAGGGCAGCATaGAGAGCACGTTGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ALAQTHPFVFSSMLLAYQTARAA*RARWRC Trigger: GCATCTCCAACGTGCTCTTCATGCTGCCCTGGCAGT...CTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGCAGAAAGAACAGCTCTTCCTTCCGTGGCTGTCAGGACTGGAGTGGGCACGAACTGGGGCTTCATTaGCAGCATGCCCCAAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: EGRKNSSSFRGCQDWSGHELGLH*QHAPNN Trigger: ATTATTTGGGGCATGCTGGCAATGAAGCCCCAGTTC...GTGCCCACTCCAGTCCTGACAGCCACGGAAGGAAGAGCTGTTCTTTCTGCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGAAGGCAGAAAGAACAGCTCTTCCTTCCGTGGCTGTCAGGACTGGAGTGGACAACAGCACCGGGATaGACTTTGCCAAAGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRRQKEQLFLPWLSGLEWTTAPG*TLPKSH Trigger: ATGGCTCTTTGGCAAAGTGCATCCCGGTGCTGTTGT...CCACTCCAGTCCTGACAGCCACGGAAGGAAGAGCTGTTCTTTCTGCCTTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCATATTGGGCTGCAGAAGAGCTGCGGAGCAGGCAGGGCATGTGTCCCTAATAAGTTGCCAATATaGGCATCATCTGCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHIGLQKSCGAGRACVPNKLPI*ASSAMP Trigger: TGGCATTGCAGATGATGCTCATATTGGCAACTTATT...AGGGACACATGCCCTGCCTGCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCGTGGCTGTCAGGACTGGAGTGGGCACCGGAAGCCATCCCTGAGGGTTCAATCGGATCCATTCTATaGGTTCTTCTTGTGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPWLSGLEWAPEAIPEGSIGSIL*VLLVVN Trigger: ATTTACCACAAGAAGAACTCATAGAATGGATCCGAT...TGAACCCTCAGGGATGGCTTCCGGTGCCCACTCCAGTCCTGACAGCCACGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCGTGGCTGTCAGGACTGGAGTGGGCACCGGAAGCCATCCCTGAGGGTTCATCTTCTTATGCACCATaGCTCTTCCAAAATGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPWLSGLEWAPEAIPEGSSSYAP*LFQNVV Trigger: TACTACATTTTGGAAGAGTCATGGTGCATAAGAAGA...TGAACCCTCAGGGATGGCTTCCGGTGCCCACTCCAGTCCTGACAGCCACGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGCTCCCTTTCCAGCGTTaGGAGGTGAGAGAAATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILLSSHPCCWPTRTAHTLLPFQR*EVREMP Trigger: CGGCATTTCTCTCACCTCTCAACGCTGGAAAGGGAG...CAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGACGAACTGGGCAAACTaGCAGGGCAGCATGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALAQTHPFVFSSMLLAYQTNWAN*QGSMKS Trigger: GCTCTTCATGCTGCCCTGGCAGTTTGCCCAGTTCGT...CTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | AGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCACACGGTGGGCATGGCGCCTaGAAACACTGCATCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHILLSSHPCCWPTRTAHGGHGA*KHCIWF Trigger: AAACCAGATGCAGTGTTTGCAGGCGCCATGCCCACC...GTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTGACCAATGTCCCCCAGACAAGCTTGTCCTTCGGCTCTGGGAAGAAGGCAATCCAAACAGCTGTCTaGAACAGATCAAGGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVTNVPQTSLSFGSGKKAIQTAV*NRSRMP Trigger: TGGCATCCTTGATCTGTTCCAGACAGCTGTTTGGAT...TGCCTTCTTCCCAGAGCCGAAGGACAAGCTTGTCTGGGGGACATTGGTCACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCATATTGGGCTGCAGAAGAGCTGCGGAGCAGGCAGGGCATGTGTCCCTATCGGATCCATTCTATaGGTTCTTCTTGTGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSHIGLQKSCGAGRACVPIGSIL*VLLVVN Trigger: ATTTACCACAAGAAGAACTCATAGAATGGATCCGAT...AGGGACACATGCCCTGCCTGCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | TGTATCCACACAGCAGCCATATTGGGCTGCAGAAGAGCTGCGGAGCAGGCAGGGAATATGAGCATCATCTaGAATGCCAAAGATCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CIHTAAILGCRRAAEQAGNMSII*NAKDPG Trigger: TCCAGGATCTTTGGCATTGCAGATGATGCTCATATT...CCCTGCCTGCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCTGTGTGGATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | TCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGACAGGCATTTTACACAAGGAATGGGTATaGGAAGCTTTCTCGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHPCCWPTRTAHTLTGILHKEWV*EAFSER Trigger: CCTCTCCGAGAAAGCTTCTCATACCCATTCCTTGTG...TAAAATGCCTGTCAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | TGTATCCACACAGCAGCCATATTGGGCTGCAGAAGAGCTGCGGAGCAGGCAGGGCAGCAGATCTTGGTTTaGATACCAATCAAATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: CIHTAAILGCRRAAEQAGQQILV*IPIKSI Trigger: AATGGATTTGATTGGTATTCAAACCAAGATCTGCTG...CCCTGCCTGCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCTGTGTGGATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CCA 90 bp | TCAGATGAGGAAGCCTGGCCACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGATACTATTTTTGTTCTaGCTCTTAGACCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDEEAWPQSATVGMAVPGILFLF*LLDLHL Trigger: AAGATGCAGGTCTAAGAGCCAGAACAAAAATAGTAT...CCCGGGGACTGCCATTCCCACTGTTGCAGACTGTGGCCAGGCTTCCTCATCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCCATATTGGGCTGCAGAAGAGCTGCGGAGCAGGCAGGGCATGTGTCCCTATACTATTTTTGTTCTaGCTCTTAGACCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSHIGLQKSCGAGRACVPILFLF*LLDLHL Trigger: AAGATGCAGGTCTAAGAGCCAGAACAAAAATAGTAT...AGGGACACATGCCCTGCCTGCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| 3UTR CAA 72 bp | ATGCAGTGGGCCCCAAGGCCGCATTTCCAAGCTGACTaGACTAAATACAAGCAAAGCTTGCTGCTGGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: MQWAPRPHFQAD*TKYKQSLLLEL Trigger: TAACTCCAGCAGCAAGCTTTGCTTGTATTTAGTCAAGTCAGCTTGGAAATGCGGCCTTGGGGCCCACTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTGACCAATGTCCCCCAGACAAGCTTGTCCTTCGGCTCTGGGAAGAAGGCAATCGGATCCATTCTATaGGTTCTTCTTGTGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QVTNVPQTSLSFGSGKKAIGSIL*VLLVVN Trigger: ATTTACCACAAGAAGAACTCATAGAATGGATCCGAT...TGCCTTCTTCCCAGAGCCGAAGGACAAGCTTGTCTGGGGGACATTGGTCACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | ATCGCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACGTTGGAGATGCAGAGTaGAATCAGACTCCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IALAQTHPFVFSSMLLAYVGDAE*NQTPSA Trigger: TGCAGAGGGAGTCTGATTGCACTCTGCATCTCCAAC...GTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | GCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCGAGCATCATCTGCAATaGCAAAGATCCTGGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AQTHPFVFSSMLLAYQNSEHHLQ*QRSWKS Trigger: TGACTTCCAGGATCTTTGGCATTGCAGATGATGCTC...GCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | CTAACTGCTGTATCCACACAGCAGCCATATTGGGCTGCAGAAGAGCTGCGGAGCTCTTCTTATGCACCATaGCTCTTCCAAAATGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTAVSTQQPYWAAEELRSSSYAP*LFQNVV Trigger: TACTACATTTTGGAAGAGTCATGGTGCATAAGAAGA...GCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCTGTGTGGATACAGCAGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGACATTCATTCTTAGGAACTaGGGCTTCATTGCCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LLSSHPCCWPTRTAHTLTFILRN*GFIASM Trigger: CATGCTGGCAATGAAGCCCCAGTTCCTAAGAATGAA...TGTCAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | ACTAAGCATCAGATGAGGAAGCCTGGCCACAGTCTGCAACAGTGGGAATGGCAGCAGCAGATCTTGGTTTaGATACCAATCAAATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TKHQMRKPGHSLQQWEWQQQILV*IPIKSI Trigger: AATGGATTTGATTGGTATTCAAACCAAGATCTGCTG...CTGCCATTCCCACTGTTGCAGACTGTGGCCAGGCTTCCTCATCTGATGCTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR GCA 90 bp | CTGTGCAGGATCGCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGGAGCATCATCTGCAATaGCAAAGATCCTGGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCRIALAQTHPFVFSSMLEHHLQ*QRSWKS Trigger: TGACTTCCAGGATCTTTGGCATTGCAGATGATGCTC...CAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGCGATCCTGCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAATAATGATGCAATCTaGGTAAGAAGCACGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALAQTHPFVFSSMLLAYQNNDAI*VRSTNW Trigger: CCAGTTCGTGCTTCTTACTCAGATTGCATCATTATT...CTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCAAATAATGATGCAATCTaGGTAAGAAGCACGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRHILLSSHPCCWPTRTANNDAI*VRSTNW Trigger: CCAGTTCGTGCTTCTTACTCAGATTGCATCATTATT...TGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGAATAAGTTGCCAATATaGGCATCATCTGCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLSSHPCCWPTRTAHTLNKLPI*ASSAMP Trigger: TGGCATTGCAGATGATGCTCATATTGGCAACTTATT...CAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CCA 90 bp | GCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCCTGTCCAGCAGATCTTaGTTTGAATACCAATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AQTHPFVFSSMLLAYQNSLSSRS*FEYQSN Trigger: ATTTGATTGGTATTCAAACCAAGATCTGCTGGACAG...GCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR TCA 90 bp | CTGTGCAGGATCGCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGAATAAGTTGCCAATATaGGCATCATCTGCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCRIALAQTHPFVFSSMLNKLPI*ASSAMP Trigger: TGGCATTGCAGATGATGCTCATATTGGCAACTTATT...CAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGCGATCCTGCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGACACTGTCCAGCAGATCTTaGTTTGAATACCAATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSSHPCCWPTRTAHTLTLSSRS*FEYQSN Trigger: ATTTGATTGGTATTCAAACCAAGATCTGCTGGACAG...TGTCAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CCA 90 bp | ATCGCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCTGTCCAGCAGATCTTaGTTTGAATACCAATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: IALAQTHPFVFSSMLLAYLSSRS*FEYQSN Trigger: ATTTGATTGGTATTCAAACCAAGATCTGCTGGACAG...GTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CCA 90 bp | AGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGAACAGCACACATACTATTTTTGTTCTaGCTCTTAGACCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RHILLSSHPCCWPTRTAHILFLF*LLDLHL Trigger: AAGATGCAGGTCTAAGAGCCAGAACAAAAATAGTAT...GTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| 3UTR CAA 72 bp | CATTTCCAAGCTGACTTGACTAAATACAAGCAAAGCTaGCTGCTGGAGTTACATTACGACATACTGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HFQADLTKYKQS*LLELHYDILFV Trigger: AACAAACAGTATGTCGTAATGTAACTCCAGCAGCAAGCTTTGCTTGTATTTAGTCAAGTCAGCTTGGAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTGGCTGTCAGGACTGGAGTGGGCACCGGAAGCCATCCCTGAGGGTTCAGCCGCGTCCCGGTGCTaGCTCCGCGCCTGCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: LPWLSGLEWAPEAIPEGSAASRC*LRACRT Trigger: GGTCCTGCAGGCGCGGAGCAAGCACCGGGACGCGGC...TGAACCCTCAGGGATGGCTTCCGGTGCCCACTCCAGTCCTGACAGCCACGGAAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGAAGGCAGAAAGAACAGCTCTTCCTTCCGTGGCTGTCAGGACTGGAGTGGGCCGCGTCCCGGTGCTaGCTCCGCGCCTGCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GRRQKEQLFLPWLSGLEWAASRC*LRACRT Trigger: GGTCCTGCAGGCGCGGAGCAAGCACCGGGACGCGGC...CCACTCCAGTCCTGACAGCCACGGAAGGAAGAGCTGTTCTTTCTGCCTTCTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTCTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCAGAGAGCTTCACACTaGCCATGGTGGGCATGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TVCNSGNGSPRAASGREAQRASH*PWWAWR Trigger: GCGCCATGCCCACCATGGCAAGTGTGAAGCTCTCTG...GGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAGACTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCCCTGGCTGGTGAGGCTGGCTCCTTACTGAGGCCACACTCCTCAGTTGCACAGAGAGCTTCACACTaGCCATGGTGGGCATGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EALAGEAGSLLRPHSSVAQRASH*PWWAWR Trigger: GCGCCATGCCCACCATGGCAAGTGTGAAGCTCTCTG...TGCAACTGAGGAGTGTGGCCTCAGTAAGGAGCCAGCCTCACCAGCCAGGGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTGGCTGTCAGGACTGGAGTGGGCACCGGAAGCCATCCCTGAGGGTTCAAGCATGAAGAGCACGTaGGAGATGCAGAGTGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LPWLSGLEWAPEAIPEGSSMKST*EMQSAI Trigger: GATTGCACTCTGCATCTCCAACGTGCTCTTCATGCT...TGAACCCTCAGGGATGGCTTCCGGTGCCCACTCCAGTCCTGACAGCCACGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | CTGCAACAGTGGGAATGGCAGTCCCCGGGCAGCTTCAGGGAGGGAGGCCCTGGCCTGGAAGTCACAGACTaGAGTATAACAGTTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LQQWEWQSPGSFREGGPGLEVTD*SITVPN Trigger: GTTTGGAACTGTTATACTCAAGTCTGTGACTTCCAG...GCCAGGGCCTCCCTCCCTGAAGCTGCCCGGGGACTGCCATTCCCACTGTTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS GCA 90 bp | ATGTGGGTGGTTCACCACGGGTCGGAGAGCAGAGAGCTTCACACTTaGCATGGTGGGCATGGCGCCTGCAAACACTGCATCTGGTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: MWVVHHGSESRELHT*HGGHGACKHCIWFC Trigger: ACAAAACCAGATGCAGTGTTTGCAGGCGCCATGCCCACCATGGCAAGTGTGAAGCTCTCTGCTCTCCGACCCGTGGTGAACCACCCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | GCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGCCTACCAGCAGAGAGCTTCACACTaGCCATGGTGGGCATGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ALAQTHPFVFSSMLLAYQQRASH*PWWAWR Trigger: GCGCCATGCCCACCATGGCAAGTGTGAAGCTCTCTG...CTGGTAGGCCAGCAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCCCTGGCTGGTGAGGCTGGCTCCTTACTGAGGCCACACTCCTCAGTTGCACCAGCAGATCTTGGTTaGAATACCAATCAAATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EALAGEAGSLLRPHSSVAPADLG*NTNQIH Trigger: ATGGATTTGATTGGTATTCAAACCAAGATCTGCTGG...TGCAACTGAGGAGTGTGGCCTCAGTAAGGAGCCAGCCTCACCAGCCAGGGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS GCA 90 bp | GAGAAATGCCGATCGTTTTCAAAGAGGTGCGTTATGTGGCTCCAGTaGAATAGAGCTGCAAAGGAAGCTAGCAGCAGCGTGCTCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EKCRSFSKRCVMWLQ*NRAAKEASSSVLQV Trigger: GACCTGGAGCACGCTGCTGCTAGCTTCCTTTGCAGCTCTATTGCACTGGAGCCACATAACGCACCTCTTTGAAAACGATCGGCATTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGCCATATTGGGCTGCAGAAGAGCTGCGGAGCAGGCAGGGCATGTGTCCCTCCAGCAGATCTTGGTTaGAATACCAATCAAATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSHIGLQKSCGAGRACVPPADLG*NTNQIH Trigger: ATGGATTTGATTGGTATTCAAACCAAGATCTGCTGG...AGGGACACATGCCCTGCCTGCTCCGCAGCTCTTCTGCAGCCCAATATGGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | ACTAAGCATCAGATGAGGAAGCCTGGCCACAGTCTGCAACAGTGGGAATGGCAGAGCATGAAGAGCACGTaGGAGATGCAGAGTGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: TKHQMRKPGHSLQQWEWQSMKST*EMQSAI Trigger: GATTGCACTCTGCATCTCCAACGTGCTCTTCATGCT...CTGCCATTCCCACTGTTGCAGACTGTGGCCAGGCTTCCTCATCTGATGCTTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCCCTGGCTGGTGAGGCTGGCTCCTTACTGAGGCCACACTCCTCAGTTGCATCCATGTTCAAATTGTaGTTTTCTTGTATGTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: EALAGEAGSLLRPHSSVASMFKL*FSCMCP Trigger: CGGACACATACAAGAAAACAACAATTTGAACATGGA...TGCAACTGAGGAGTGTGGCCTCAGTAAGGAGCCAGCCTCACCAGCCAGGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTGACCAATGTCCCCCAGACAAGCTTGTCCTTCGGCTCTGGGAAGAAGGCACTGGAAGTCACAGACTaGAGTATAACAGTTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QVTNVPQTSLSFGSGKKALEVTD*SITVPN Trigger: GTTTGGAACTGTTATACTCAAGTCTGTGACTTCCAG...TGCCTTCTTCCCAGAGCCGAAGGACAAGCTTGTCTGGGGGACATTGGTCACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGAAGGCAGAAAGAACAGCTCTTCCTTCCGTGGCTGTCAGGACTGGAGTGGCCAGCAGATCTTGGTTaGAATACCAATCAAATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GRRQKEQLFLPWLSGLEWPADLG*NTNQIH Trigger: ATGGATTTGATTGGTATTCAAACCAAGATCTGCTGG...CCACTCCAGTCCTGACAGCCACGGAAGGAAGAGCTGTTCTTTCTGCCTTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
||
| CDS-3UTR CAA 90 bp | GGTGAGGCTGGCTCCTTACTGAGGCCACACTCCTCAGTTGCAAGTGCTGTCTTTTCCATGTTCAAATTGTaGTTTTCTTGTATGTGTCCG | + |
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Preference number: 5 (lower is better) Translates to: GEAGSLLRPHSSVASAVFSMFKL*FSCMCP Trigger: CGGACACATACAAGAAAACAACAATTTGAACATGGA...AAAGACAGCACTTGCAACTGAGGAGTGTGGCCTCAGTAAGGAGCCAGCCTCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR CAA 90 bp | CTGTGCAGGATCGCTTTAGCTCAGACACATCCTTTTGTCTTCTCATCCATGCTGCTGGAAGTCACAGACTaGAGTATAACAGTTCCAAAC | + |
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Preference number: 5 (lower is better) Translates to: LCRIALAQTHPFVFSSMLLEVTD*SITVPN Trigger: GTTTGGAACTGTTATACTCAAGTCTGTGACTTCCAG...CAGCATGGATGAGAAGACAAAAGGATGTGTCTGAGCTAAAGCGATCCTGCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS-3UTR CAA 90 bp | TCTCATCCATGCTGCTGGCCTACCAGAACAGCACACACTCTGACAGGCATTTTATCCATGTTCAAATTGTaGTTTTCTTGTATGTGTCCG | + |
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Preference number: 5 (lower is better) Translates to: SHPCCWPTRTAHTLTGILSMFKL*FSCMCP Trigger: CGGACACATACAAGAAAACAACAATTTGAACATGGA...TAAAATGCCTGTCAGAGTGTGTGCTGTTCTGGTAGGCCAGCAGCATGGATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS GCA 72 bp | GTTCACCACGGGTCGGAGAGCAGAGAGCTTCACACTTaGCATGGTGGGCATGGCGCCTGCAAACACTGCATC | + |
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Preference number: 6 (lower is better) Translates to: VHHGSESRELHT*HGGHGACKHCI Trigger: GATGCAGTGTTTGCAGGCGCCATGCCCACCATGGCAAGTGTGAAGCTCTCTGCTCTCCGACCCGTGGTGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS CAA 72 bp | GGTTCACCACGGGTCGGAGAGCAGAGAGCTTCACACTaGCCATGGTGGGCATGGCGCCTGCAAACACTGCAT | + |
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Preference number: 6 (lower is better) Translates to: GSPRVGEQRASH*PWWAWRLQTLH Trigger: ATGCAGTGTTTGCAGGCGCCATGCCCACCATGGCAAGTGTGAAGCTCTCTGCTCTCCGACCCGTGGTGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS CAA 90 bp | AATGTGGGTGGTTCACCACGGGTCGGAGAGCAGAGAGCTTCACACTaGCCATGGTGGGCATGGCGCCTGCAAACACTGCATCTGGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: NVGGSPRVGEQRASH*PWWAWRLQTLHLVL Trigger: CAAAACCAGATGCAGTGTTTGCAGGCGCCATGCCCACCATGGCAAGTGTGAAGCTCTCTGCTCTCCGACCCGTGGTGAACCACCCACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS TCA 72 bp | GTGCGGAAAGCCATCTCCCTTTCCAGCGTTGAGAGGTaGGAGAAATGCCGATCGTTTTCAAAGAGGTGCGTT | + |
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Preference number: 6 (lower is better) Translates to: VRKAISLSSVER*EKCRSFSKRCV Trigger: AACGCACCTCTTTGAAAACGATCGGCATTTCTCTCACCTCTCAACGCTGGAAAGGGAGATGGCTTTCCGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS GCA 72 bp | CGATCGTTTTCAAAGAGGTGCGTTATGTGGCTCCAGTaGAATAGAGCTGCAAAGGAAGCTAGCAGCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: RSFSKRCVMWLQ*NRAAKEASSSV Trigger: CACGCTGCTGCTAGCTTCCTTTGCAGCTCTATTGCACTGGAGCCACATAACGCACCTCTTTGAAAACGATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS CCA 72 bp | TGCCATGGTGGGCATGGCGCCTGCAAACACTGCATCTaGTTTTGTGCTGTATCGGATCCATTCTATGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: CHGGHGACKHCI*FCAVSDPFYEF Trigger: GAACTCATAGAATGGATCCGATACAGCACAAAACCAGATGCAGTGTTTGCAGGCGCCATGCCCACCATGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS CCA 72 bp | GAGAAATGCCGATCGTTTTCAAAGAGGTGCGTTATGTaGCTCCAGTGCAATAGAGCTGCAAAGGAAGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: EKCRSFSKRCVM*LQCNRAAKEAS Trigger: GCTAGCTTCCTTTGCAGCTCTATTGCACTGGAGCCACATAACGCACCTCTTTGAAAACGATCGGCATTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS TCA 72 bp | GTGTCTTCGTGTATCGCAGCGGAGTCTCCTTCTCCATaGAGTCAAACTCGGCTGCACAAGTATATAGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: VSSCIAAESPSP*SQTRLHKYIVK Trigger: CTTTACTATATACTTGTGCAGCCGAGTTTGACTTCATGGAGAAGGAGACTCCGCTGCGATACACGAAGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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| CDS CAA 72 bp | CTGCAGAGCGTGGTAAACCAACTCTCCATGTTCAAATaGTTGTTTTCTTGTATGTGTCCGTTGTTTAGCTAC | + |
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Preference number: 6 (lower is better) Translates to: LQSVVNQLSMFK*LFSCMCPLFSY Trigger: GTAGCTAAACAACGGACACATACAAGAAAACAACAATTTGAACATGGAGAGTTGGTTTACCACGCTCTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115277.9 ENSMUST00000142064.8 ENSMUST00000170356.2 |
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