Pregenerated sensors for DPPA5A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060461

Ensembl transcript IDs: ENSMUST00000071991.6

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 72 bp	ATCCCGCCAGAACCAAACACTGGCCACAGCTTAACCTaGATCCAGGTCGGAGACACAAGGACTGGAAACTGG	+
Preference number: 3 (lower is better) Translates to: IPPEPNTGHSLT*IQVGDTRTGNW Trigger: CCAGTTTCCAGTCCTTGTGTCTCCGACCTGGATGCAGGTTAAGCTGTGGCCAGTGTTTGGTTCTGGCGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071991.6
CDS-3UTR CCA 90 bp	CCGCCAGAACCAAACACTGGCCACAGCTTAACCTGCATCCAGGTCGGAGACACACATTCGAGATCCCTGTaGGCCAAACAGATATTTCAG	+
Preference number: 4 (lower is better) Translates to: PPEPNTGHSLTCIQVGDTHSRSL*AKQIFQ Trigger: CTGAAATATCTGTTTGGCCCACAGGGATCTCGAATG...TGTGTCTCCGACCTGGATGCAGGTTAAGCTGTGGCCAGTGTTTGGTTCTGGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071991.6
CDS-3UTR CCA 90 bp	CAGGGATCCAGGAATATCTTGCTAGGATGTAACAAAGCTAAAAATCCCGCCAGAGCTCCAGGGTCTTCATaGATTCCTCCAGCTTCAGCA	+
Preference number: 4 (lower is better) Translates to: QGSRNILLGCNKAKNPARAPGSS*IPPASA Trigger: TGCTGAAGCTGGAGGAATCCATGAAGACCCTGGAGC...TCTGGCGGGATTTTTAGCTTTGTTACATCCTAGCAAGATATTCCTGGATCCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071991.6
3UTR CAA 72 bp	TCACATCAGAATGCGCAGCAGGGATCCAGGAATATCTaGCTAGGATGTAACAAAGCTAAAAATCCCGCCAGA	+
Preference number: 4 (lower is better) Translates to: SHQNAQQGSRNI*LGCNKAKNPAR Trigger: TCTGGCGGGATTTTTAGCTTTGTTACATCCTAGCAAGATATTCCTGGATCCCTGCTGCGCATTCTGATGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071991.6

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