Pregenerated sensors for DPPA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058550Ensembl transcript IDs: ENSMUST00000050705.4, ENSMUST00000096045.9
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTaGAGATATCATCCTCCTGCCCCAGGACCTACTTGCAGCAAAACA | + |
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Preference number: 1 (lower is better) Translates to: MTPVVLVTGLATIVI*RYHPPAPGPTCSKT Trigger: TGTTTTGCTGCAAGTAGGTCCTGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| 3UTR-3UTR GCA 90 bp | ACACTAACAACACACTACAACCCAGGGAAGAGGACATGCATGCGGAGGCTACAGGAGATATCATCCTCCTaGCCCAGGACCTACTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: TLTTHYNPGKRTCMRRLQEISSS*PRTYLQ Trigger: CTGCAAGTAGGTCCTGGGGCAGGAGGATGATATCTC...CTGTAGCCTCCGCATGCATGTCCTCTTCCCTGGGTTGTAGTGTGTTGTTAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| 3UTR-3UTR TCA 90 bp | GACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCAAGAGTTCACTCTCAGTaGTCAGTCATCACAGCGAGC | + |
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Preference number: 2 (lower is better) Translates to: DARCAGDRTSNYCYLEISRVHSQ*SVITAS Trigger: GCTCGCTGTGATGACTGATCACTGAGAGTGAACTCT...TGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| 3UTR-3UTR TCA 90 bp | ACTGGTTATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGAGAGTTCACTCTCAGTaGTCAGTCATCACAGCGAGC | + |
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Preference number: 2 (lower is better) Translates to: TGYDARCAGDRTSNYCYLRVHSQ*SVITAS Trigger: GCTCGCTGTGATGACTGATCACTGAGAGTGAACTCT...CAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCATAACCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| 3UTR-3UTR GCA 90 bp | TATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATAGCCCCAGGACCTACTTaGAGCAAAACACATAGGATG | + |
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Preference number: 2 (lower is better) Translates to: YDARCAGDRTSNYCYLEIAPGPT*SKTHRM Trigger: CATCCTATGTGTTTTGCTGCAAGTAGGTCCTGGGGC...TATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGGTTATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGCTATCCCTTAAGTTCTaGATGAGAAAGGCACCTTCA | + |
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Preference number: 2 (lower is better) Translates to: TGYDARCAGDRTSNYCYLLSLKF*MRKAPS Trigger: TGAAGGTGCCTTTCTCATCCAGAACTTAAGGGATAG...CAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCATAACCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| 3UTR-3UTR CCA 90 bp | TATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATACTATCCCTTAAGTTCTaGATGAGAAAGGCACCTTCA | + |
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Preference number: 2 (lower is better) Translates to: YDARCAGDRTSNYCYLEILSLKF*MRKAPS Trigger: TGAAGGTGCCTTTCTCATCCAGAACTTAAGGGATAG...TATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| 3UTR TCA 72 bp | TTTTATCTTCACAAAAGAGTAAGAGTTCACTCTCAGTaGTCAGTCATCACAGCGAGCAGAGGTGGCCTCGCT | + |
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Preference number: 3 (lower is better) Translates to: FYLHKRVRVHSQ*SVITASRGGLA Trigger: AGCGAGGCCACCTCTGCTCGCTGTGATGACTGATCACTGAGAGTGAACTCTTACTCTTTTGTGAAGATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| 3UTR TCA 72 bp | GCATCAACTAACTTACACTATCCCTTAAGTTCTGGATaGGAAAGGCACCTTCAAAGGCAGAGATGTAGATTT | + |
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Preference number: 3 (lower is better) Translates to: ASTNLHYPLSSG*ERHLQRQRCRF Trigger: AAATCTACATCTCTGCCTTTGAAGGTGCCTTTCTCATCCAGAACTTAAGGGATAGTGTAAGTTAGTTGATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR GCA 90 bp | ACACTAACAACACACTACAACCCAGGGAAGAGGACATGCATGCGGAGGCTACAGATGAGGGCAGGTATCTaGTCCTCTGGCACAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: TLTTHYNPGKRTCMRRLQMRAGI*SSGTGT Trigger: GGTCCCTGTGCCAGAGGAGCAGATACCTGCCCTCAT...CTGTAGCCTCCGCATGCATGTCCTCTTCCCTGGGTTGTAGTGTGTTGTTAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR GCA 90 bp | GACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCATGTCCAGCGTGGAACTaGAGCCGAACCCAACCACGC | + |
|
Preference number: 4 (lower is better) Translates to: DARCAGDRTSNYCYLEISCPAWN*SRTQPR Trigger: GCGTGGTTGGGTTCGGCTGCAGTTCCACGCTGGACA...TGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | ACACTAACAACACACTACAACCCAGGGAAGAGGACATGCATGCGGAGGCTACAGCCTACGAGTCTGTCCTaGCGTCTCAGTGTCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TLTTHYNPGKRTCMRRLQPTSLS*RLSVLW Trigger: CCACAAGACACTGAGACGCCAGGACAGACTCGTAGG...CTGTAGCCTCCGCATGCATGTCCTCTTCCCTGGGTTGTAGTGTGTTGTTAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | ACACTAACAACACACTACAACCCAGGGAAGAGGACATGCATGCGGAGGCTACAGAGTTCCCAGGAAGGCTaGTCCCATGAACCACACACC | + |
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Preference number: 4 (lower is better) Translates to: TLTTHYNPGKRTCMRRLQSSQEG*SHEPHT Trigger: GGTGTGTGGTTCATGGGACCAGCCTTCCTGGGAACT...CTGTAGCCTCCGCATGCATGTCCTCTTCCCTGGGTTGTAGTGTGTTGTTAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR GCA 90 bp | ACACTAACAACACACTACAACCCAGGGAAGAGGACATGCATGCGGAGGCTACAGTTCCTTCGGCTCTTCTaGGCTCCACTTCTTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TLTTHYNPGKRTCMRRLQFLRLF*APLLVS Trigger: GGAGACAAGAAGTGGAGCGCAGAAGAGCCGAAGGAA...CTGTAGCCTCCGCATGCATGTCCTCTTCCCTGGGTTGTAGTGTGTTGTTAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR GCA 90 bp | CTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCATCCTCCTGCCCCAATGAGGGCAGGTATCTaGTCCTCTGGCACAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: LVTGLATIVIWRYHPPAPMRAGI*SSGTGT Trigger: GGTCCCTGTGCCAGAGGAGCAGATACCTGCCCTCAT...TGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR GCA 90 bp | TATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATGTCCAGCGTGGAACTaGAGCCGAACCCAACCACGC | + |
|
Preference number: 4 (lower is better) Translates to: YDARCAGDRTSNYCYLEICPAWN*SRTQPR Trigger: GCGTGGTTGGGTTCGGCTGCAGTTCCACGCTGGACA...TATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | ACACTAACAACACACTACAACCCAGGGAAGAGGACATGCATGCGGAGGCTACAGAGGTATCTGCTCCTCTaGCACAGGGACCATTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLTTHYNPGKRTCMRRLQRYLLL*HRDHFQ Trigger: CTGGAAATGGTCCCTGTGCCAGAGGAGCAGATACCT...CTGTAGCCTCCGCATGCATGTCCTCTTCCCTGGGTTGTAGTGTGTTGTTAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | GACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCACAGGCTTGTCCAGCGTaGAACTGCAGCCGAACCCAA | + |
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Preference number: 4 (lower is better) Translates to: DARCAGDRTSNYCYLEISQACPA*NCSRTQ Trigger: TTGGGTTCGGCTGCAGTTCCACGCTGGACAAGCCTG...TGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | CTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCATCCTCCTGCCCCAGTTGTCCTCCAGGTGTaGGGGTGGAAATGTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LVTGLATIVIWRYHPPAPVVLQV*GWKCAG Trigger: GCCTGCACATTTCCACCCCCACACCTGGAGGACAAC...TGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | GACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCAGTTGTCCTCCAGGTGTaGGGGTGGAAATGTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: DARCAGDRTSNYCYLEISVVLQV*GWKCAG Trigger: GCCTGCACATTTCCACCCCCACACCTGGAGGACAAC...TGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | ACTGGTTATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGCCTACGAGTCTGTCCTaGCGTCTCAGTGTCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TGYDARCAGDRTSNYCYLPTSLS*RLSVLW Trigger: CCACAAGACACTGAGACGCCAGGACAGACTCGTAGG...CAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCATAACCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | CTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCATCCTCCTGCCCCAAGTTCCCAGGAAGGCTaGTCCCATGAACCACACACC | + |
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Preference number: 4 (lower is better) Translates to: LVTGLATIVIWRYHPPAPSSQEG*SHEPHT Trigger: GGTGTGTGGTTCATGGGACCAGCCTTCCTGGGAACT...TGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR GCA 90 bp | CTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCATCCTCCTGCCCCATTCCTTCGGCTCTTCTaGGCTCCACTTCTTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LVTGLATIVIWRYHPPAPFLRLF*APLLVS Trigger: GGAGACAAGAAGTGGAGCGCAGAAGAGCCGAAGGAA...TGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | GACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCAGAGCTGTCTTCAACCTaGCGTCTTTGGCTGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: DARCAGDRTSNYCYLEISELSST*RLWLSQ Trigger: CTGACTCAGCCAAAGACGCCAGGTTGAAGACAGCTC...TGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | ACACTAACAACACACTACAACCCAGGGAAGAGGACATGCATGCGGAGGCTACAGTGGGGGCAGATACTCTaGAATAGGAGGAATTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: TLTTHYNPGKRTCMRRLQWGQIL*NRRNWY Trigger: GTACCAATTCCTCCTATTCCAGAGTATCTGCCCCCA...CTGTAGCCTCCGCATGCATGTCCTCTTCCCTGGGTTGTAGTGTGTTGTTAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS-3UTR GCA 90 bp | ACACTAACAACACACTACAACCCAGGGAAGAGGACATGCATGCGGAGGCTACAGCTTCTTAGCATTGGATaGAATTCTGGCCCAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: TLTTHYNPGKRTCMRRLQLLSIG*NSGPRC Trigger: GCATCTTGGGCCAGAATTGCATCCAATGCTAAGAAG...CTGTAGCCTCCGCATGCATGTCCTCTTCCCTGGGTTGTAGTGTGTTGTTAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | ATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATGAGCTGTCTTCAACCTaGCGTCTTTGGCTGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: MTPVVLVTGLATIVIWRYELSST*RLWLSQ Trigger: CTGACTCAGCCAAAGACGCCAGGTTGAAGACAGCTC...ATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | ATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATAGGTATCTGCTCCTCTaGCACAGGGACCATTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: MTPVVLVTGLATIVIWRYRYLLL*HRDHFQ Trigger: CTGGAAATGGTCCCTGTGCCAGAGGAGCAGATACCT...ATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | CTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCATCCTCCTGCCCCACTCCAGCATTTGTTCTaGGAAAGCCCTTGCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LVTGLATIVIWRYHPPAPLQHLF*ESPCKE Trigger: CTCCTTGCAAGGGCTTTCCCAGAACAAATGCTGGAG...TGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | GACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCAGCAGGAAGAGGGCAATaGCTTTTCCTTTCTTATCGG | + |
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Preference number: 4 (lower is better) Translates to: DARCAGDRTSNYCYLEISAGRGQ*LFLSYR Trigger: CCGATAAGAAAGGAAAAGCCATTGCCCTCTTCCTGC...TGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | CTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCATCCTCCTGCCCCAGCAGGAAGAGGGCAATaGCTTTTCCTTTCTTATCGG | + |
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Preference number: 4 (lower is better) Translates to: LVTGLATIVIWRYHPPAPAGRGQ*LFLSYR Trigger: CCGATAAGAAAGGAAAAGCCATTGCCCTCTTCCTGC...TGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR TCA 90 bp | ACTGGTTATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGAAGATCTTGTTCTTATaGACACACTTGGGGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: TGYDARCAGDRTSNYCYLKILFL*THLGHS Trigger: GCTGTGCCCCAAGTGTGTTCATAAGAACAAGATCTT...CAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCATAACCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR TCA 90 bp | CTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCATCCTCCTGCCCCAAAGATCTTGTTCTTATaGACACACTTGGGGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: LVTGLATIVIWRYHPPAPKILFL*THLGHS Trigger: GCTGTGCCCCAAGTGTGTTCATAAGAACAAGATCTT...TGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | CTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCATCCTCCTGCCCCACGTCTCAGTGTCTTGTaGTTTTCCCTCCTTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LVTGLATIVIWRYHPPAPRLSVL*FSLLWF Trigger: AAACCAAAGGAGGGAAAACCACAAGACACTGAGACG...TGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | TATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATAGTGAATCAGGTTCACTaGGGGCAGATACTCTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: YDARCAGDRTSNYCYLEIVNQVH*GQILWN Trigger: ATTCCAGAGTATCTGCCCCCAGTGAACCTGATTCAC...TATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS-3UTR GCA 90 bp | CTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCATCCTCCTGCCCCACTAATTTCTGGCCTTTaGTGCTCACTCGTTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LVTGLATIVIWRYHPPAPLISGL*CSLVSS Trigger: AGAAGAAACGAGTGAGCAGCAAAGGCCAGAAATTAG...TGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | TATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATACGTCTCAGTGTCTTGTaGTTTTCCCTCCTTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: YDARCAGDRTSNYCYLEIRLSVL*FSLLWF Trigger: AAACCAAAGGAGGGAAAACCACAAGACACTGAGACG...TATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CCA 90 bp | CTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCATCCTCCTGCCCCATGGTTTTCCCTCCTTTaGTTTACAACCATTATCTGT | + |
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Preference number: 4 (lower is better) Translates to: LVTGLATIVIWRYHPPAPWFSLL*FTTIIC Trigger: ACAGATAATGGTTGTAAACCAAAGGAGGGAAAACCA...TGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CAA 90 bp | ACACTAACAACACACTACAACCCAGGGAAGAGGACATGCATGCGGAGGCTACAGTTGGGGCACAGCATGTaGTCCTCCAGGTGTGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: TLTTHYNPGKRTCMRRLQLGHSM*SSRCGG Trigger: ACCCCCACACCTGGAGGACAACATGCTGTGCCCCAA...CTGTAGCCTCCGCATGCATGTCCTCTTCCCTGGGTTGTAGTGTGTTGTTAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CAA 90 bp | GACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCATTGGGGCACAGCATGTaGTCCTCCAGGTGTGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: DARCAGDRTSNYCYLEISLGHSM*SSRCGG Trigger: ACCCCCACACCTGGAGGACAACATGCTGTGCCCCAA...TGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS CCA 90 bp | CCGCAAAACATCTCGGTGAATCAGGTTCACTGGGGGCAGATACTCTaGAATAGGAGGAATTGGTACCTTCCTACGAGTCTGTCCTGGCGT | + |
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Preference number: 5 (lower is better) Translates to: PQNISVNQVHWGQIL*NRRNWYLPTSLSWR Trigger: ACGCCAGGACAGACTCGTAGGAAGGTACCAATTCCTCCTATTCCAGAGTATCTGCCCCCAGTGAACCTGATTCACCGAGATGTTTTGCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS CCA 90 bp | CTTCTGGCACCATGCCCGCAAAACATCTCGGTGAATCAGGTTCACTaGGGGCAGATACTCTGGAATAGGAGGAATTGGTACCTTCCTACG | + |
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Preference number: 5 (lower is better) Translates to: LLAPCPQNISVNQVH*GQILWNRRNWYLPT Trigger: CGTAGGAAGGTACCAATTCCTCCTATTCCAGAGTATCTGCCCCCAGTGAACCTGATTCACCGAGATGTTTTGCGGGCATGGTGCCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS-3UTR CAA 90 bp | ACTGGTTATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGCCTCAACTCCAGCATTaGTTCTGGGAAAGCCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: TGYDARCAGDRTSNYCYLPQLQH*FWESPC Trigger: GCAAGGGCTTTCCCAGAACAAATGCTGGAGTTGAGG...CAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCATAACCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS GCA 90 bp | CCCTTGCAAGGAGTCGTTTATAAGCATCTAATTTCTGGCCTTTGCTaGTCACTCGTTTCTTCTGGCACCATGCCCGCAAAACATCTCGGT | + |
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Preference number: 5 (lower is better) Translates to: PLQGVVYKHLISGLC*SLVSSGTMPAKHLG Trigger: ACCGAGATGTTTTGCGGGCATGGTGCCAGAAGAAACGAGTGAGCAGCAAAGGCCAGAAATTAGATGCTTATAAACGACTCCTTGCAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS-3UTR CAA 90 bp | CTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCATCCTCCTGCCCCAAGGAGCCGTGCTTGGTaGACTAGACATCTGCAATTC | + |
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Preference number: 5 (lower is better) Translates to: LVTGLATIVIWRYHPPAPRSRAW*TRHLQF Trigger: GAATTGCAGATGTCTAGTCAACCAAGCACGGCTCCT...TGGGGCAGGAGGATGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CAA 90 bp | ATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATTGGCGTCTCAGTGTCTaGTGGTTTTCCCTCCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: MTPVVLVTGLATIVIWRYWRLSV*WFSLLW Trigger: CCAAAGGAGGGAAAACCACAAGACACTGAGACGCCA...ATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CAA 90 bp | ACACTAACAACACACTACAACCCAGGGAAGAGGACATGCATGCGGAGGCTACAGTCTAATTTCTGGCCTTaGCTGCTCACTCGTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: TLTTHYNPGKRTCMRRLQSNFWP*LLTRFF Trigger: GAAGAAACGAGTGAGCAGCAAAGGCCAGAAATTAGA...CTGTAGCCTCCGCATGCATGTCCTCTTCCCTGGGTTGTAGTGTGTTGTTAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS CCA 90 bp | ATACTCTGGAATAGGAGGAATTGGTACCTTCCTACGAGTCTGTCCTaGCGTCTCAGTGTCTTGTGGTTTTCCCTCCTTTGGTTTACAACC | + |
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Preference number: 5 (lower is better) Translates to: ILWNRRNWYLPTSLS*RLSVLWFSLLWFTT Trigger: GGTTGTAAACCAAAGGAGGGAAAACCACAAGACACTGAGACGCCAGGACAGACTCGTAGGAAGGTACCAATTCCTCCTATTCCAGAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS-3UTR CAA 90 bp | ATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATAGGAGCCGTGCTTGGTaGACTAGACATCTGCAATTC | + |
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Preference number: 5 (lower is better) Translates to: MTPVVLVTGLATIVIWRYRSRAW*TRHLQF Trigger: GAATTGCAGATGTCTAGTCAACCAAGCACGGCTCCT...ATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CAA 90 bp | GACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCACACCACATTTCCCCTTaGACTTCTGATGAGGACGAA | + |
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Preference number: 5 (lower is better) Translates to: DARCAGDRTSNYCYLEISHHISP*TSDEDE Trigger: TTCGTCCTCATCAGAAGTCAAAGGGGAAATGTGGTG...TGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CAA 90 bp | TATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATACACCACATTTCCCCTTaGACTTCTGATGAGGACGAA | + |
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Preference number: 5 (lower is better) Translates to: YDARCAGDRTSNYCYLEIHHISP*TSDEDE Trigger: TTCGTCCTCATCAGAAGTCAAAGGGGAAATGTGGTG...TATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CAA 90 bp | GACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATCAGTGGTTTTCCCTCCTTaGGTTTACAACCATTATCTG | + |
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Preference number: 5 (lower is better) Translates to: DARCAGDRTSNYCYLEISVVFPP*VYNHYL Trigger: CAGATAATGGTTGTAAACCAAAGGAGGGAAAACCAC...TGATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS-3UTR CAA 90 bp | ATGACGCCCGTTGTGCTGGTGACAGGACTAGCAACTATTGTTATCTGGAGATATGTGGTTTTCCCTCCTTaGGTTTACAACCATTATCTG | + |
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Preference number: 5 (lower is better) Translates to: MTPVVLVTGLATIVIWRYVVFPP*VYNHYL Trigger: CAGATAATGGTTGTAAACCAAAGGAGGGAAAACCAC...ATATCTCCAGATAACAATAGTTGCTAGTCCTGTCACCAGCACAACGGGCGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS CCA 72 bp | CATAGGAGGGTCAATGAGGGCAGGTATCTGCTCCTCTaGCACAGGGACCATTTCCAGAGGAACTGTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: HRRVNEGRYLLL*HRDHFQRNCHL Trigger: GAGGTGACAGTTCCTCTGGAAATGGTCCCTGTGCCAGAGGAGCAGATACCTGCCCTCATTGACCCTCCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS GCA 72 bp | CTGGCCTTTGCTGCTCACTCGTTTCTTCTGGCACCATaGCCGCAAAACATCTCGGTGAATCAGGTTCACTGG | + |
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Preference number: 6 (lower is better) Translates to: LAFAAHSFLLAP*PQNISVNQVHW Trigger: CCAGTGAACCTGATTCACCGAGATGTTTTGCGGGCATGGTGCCAGAAGAAACGAGTGAGCAGCAAAGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS CCA 72 bp | GACGTTCCTCAACTCCAGCTTCCTACGAGTCTGTCCTaGCGTCTCAGTGTCTTGTGGTTTTCCCTCCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: DVPQLQLPTSLS*RLSVLWFSLLW Trigger: CCAAAGGAGGGAAAACCACAAGACACTGAGACGCCAGGACAGACTCGTAGGAAGCTGGAGTTGAGGAACGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050705.4 |
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| CDS CAA 72 bp | CCCCGTTGCTTTAGCCTTTGCAGGAGCCGTGCTTGGTaGACTAGACATCTGCAATTCCACTTCTTCCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: PRCFSLCRSRAW*TRHLQFHFFLR Trigger: CCGAAGGAAGAAGTGGAATTGCAGATGTCTAGTCAACCAAGCACGGCTCCTGCAAAGGCTAAAGCAACGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS CCA 72 bp | CCATGCCCGCAAAACATCTCGGTGAATCAGGTTCACTaGGGGCAGATACTCTGGAATAGGAGGAATTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: PCPQNISVNQVH*GQILWNRRNWY Trigger: GTACCAATTCCTCCTATTCCAGAGTATCTGCCCCCAGTGAACCTGATTCACCGAGATGTTTTGCGGGCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS CCA 72 bp | AATAGGAGGAATTGGTACCTTCCTACGAGTCTGTCCTaGCGTCTCAGTGTCTTGTGGTTTTCCCTCCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: NRRNWYLPTSLS*RLSVLWFSLLW Trigger: CCAAAGGAGGGAAAACCACAAGACACTGAGACGCCAGGACAGACTCGTAGGAAGGTACCAATTCCTCCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS CCA 72 bp | ATCTCGGTGAATCAGGTTCACTGGGGGCAGATACTCTaGAATAGGAGGAATTGGTACCTTCCTACGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: ISVNQVHWGQIL*NRRNWYLPTSL Trigger: CAGACTCGTAGGAAGGTACCAATTCCTCCTATTCCAGAGTATCTGCCCCCAGTGAACCTGATTCACCGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS CAA 72 bp | CAGCTTCCTACGAGTCTGTCCTGGCGTCTCAGTGTCTaGTGGTTTTCCCTCCTTTGGTTTACAACCATTATC | + |
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Preference number: 6 (lower is better) Translates to: QLPTSLSWRLSV*WFSLLWFTTII Trigger: GATAATGGTTGTAAACCAAAGGAGGGAAAACCACAAGACACTGAGACGCCAGGACAGACTCGTAGGAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050705.4 |
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| CDS GCA 72 bp | GGAGTCGTTTATAAGCATCTAATTTCTGGCCTTTGCTaGTCACTCGTTTCTTCTGGCACCATGCCCGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: GVVYKHLISGLC*SLVSSGTMPAK Trigger: TTTTGCGGGCATGGTGCCAGAAGAAACGAGTGAGCAGCAAAGGCCAGAAATTAGATGCTTATAAACGACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS CAA 72 bp | TACCTTCCTACGAGTCTGTCCTGGCGTCTCAGTGTCTaGTGGTTTTCCCTCCTTTGGTTTACAACCATTATC | + |
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Preference number: 6 (lower is better) Translates to: YLPTSLSWRLSV*WFSLLWFTTII Trigger: GATAATGGTTGTAAACCAAAGGAGGGAAAACCACAAGACACTGAGACGCCAGGACAGACTCGTAGGAAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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| CDS CCA 72 bp | TCCTGGCGTCTCAGTGTCTTGTGGTTTTCCCTCCTTTaGTTTACAACCATTATCTGTCTCCGACTTCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: SWRLSVLWFSLL*FTTIICLRLLL Trigger: CAAAAGAAGTCGGAGACAGATAATGGTTGTAAACCAAAGGAGGGAAAACCACAAGACACTGAGACGCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS CAA 72 bp | GTCCTGGCGTCTCAGTGTCTTGTGGTTTTCCCTCCTTaGGTTTACAACCATTATCTGTCTCCGACTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: VLASQCLVVFPP*VYNHYLSPTSF Trigger: AAAAGAAGTCGGAGACAGATAATGGTTGTAAACCAAAGGAGGGAAAACCACAAGACACTGAGACGCCAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050705.4 ENSMUST00000096045.9 |
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| CDS CAA 72 bp | CGTTCCTCAACTCCAGCATTTGTTCTGGGAAAGCCCTaGCAAGGAGTCGTTTATAAGCATCTAATTTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RSSTPAFVLGKP*QGVVYKHLISG Trigger: GCCAGAAATTAGATGCTTATAAACGACTCCTTGCAAGGGCTTTCCCAGAACAAATGCTGGAGTTGAGGAACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096045.9 |
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