Pregenerated sensors for DPPA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072419Ensembl transcript IDs: ENSMUST00000097175.5, ENSMUST00000232448.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCCAGCACGAGGCCATGAGGAGCTGTCAGTCAGAGATGTTAAAATaGAACGGGCTGTTGTTAGAGAGATGGATGCTGATTTGTCAACAG | + |
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Preference number: 1 (lower is better) Translates to: IQHEAMRSCQSEMLK*NGLLLERWMLICQQ Trigger: CTGTTGACAAATCAGCATCCATCTCTCTAACAACAGCCCGTTGCATTTTAACATCTCTGACTGACAGCTCCTCATGGCCTCGTGCTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR CCA 90 bp | TGTCAGTCAGAGATGTTAAAATGCAACGGGCTGTTGTTAGAGAGATaGATGCTGATTTGTCAACAGAGTCTCCACTCTGCTGGGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: CQSEMLKCNGLLLER*MLICQQSLHSAGRQ Trigger: CTGTCTCCCAGCAGAGTGGAGACTCTGTTGACAAATCAGCATCCATCTCTCTAACAACAGCCCGTTGCATTTTAACATCTCTGACTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR CCA 90 bp | CTTGGACAATGGAATCTCAACATTAAGAAAAATCAATCGAGGACATaGATATTTCTCACAGGCATATTGCTAGGTAAAAGCCAATCTGAA | + |
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Preference number: 1 (lower is better) Translates to: LGQWNLNIKKNQSRT*IFLTGILLGKSQSE Trigger: TTCAGATTGGCTTTTACCTAGCAATATGCCTGTGAGAAATATCCATGTCCTCGATTGATTTTTCTTAATGTTGAGATTCCATTGTCCAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGCACGAGGCCATGAGGAGCTGTCAGAGATGTTAAGATACAGCGAGGTGTTGACAGAGTCTCCACTCTaGTGGGAGACAGGAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: PARGHEELSEMLRYSEVLTESPL*WETGGG Trigger: CCCTCCTCCTGTCTCCCAGCAGAGTGGAGACTCTGT...CAACACCTCGCTGTATCTTAACATCTCTGACAGCTCCTCATGGCCTCGTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGCTAAGCATTTAGCCAATCCAGCACGAGGCCATGAGGAGCTGTCAGAGATGTCCAGCACGAGGCCATaGGGAGCTGTCAGTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: VAKHLANPARGHEELSEMSSTRP*GAVSQR Trigger: TCTCTGACTGACAGCTCCTCATGGCCTCGTGCTGGA...CATCTCTGACAGCTCCTCATGGCCTCGTGCTGGATTGGCTAAATGCTTAGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR TCA 90 bp | GCTACAGGCACAATAAGAGAAGACAGGGATGGTGAGTGTGATCGGAGTGGGAAATCCAGCACGAGGCCATaGGGAGCTGTCAGAGATGTT | + |
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Preference number: 2 (lower is better) Translates to: ATGTIREDRDGECDRSGKSSTRP*GAVRDV Trigger: AACATCTCTGACAGCTCCTCATGGCCTCGTGCTGGA...TTTCCCACTCCGATCACACTCACCATCCCTGTCTTCTCTTATTGTGCCTGTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTAAATACACTGTATTCATGTCTGTGTGAGTGGCCCCAAAGGCCAAATTGGGGGGCTTCTGATGACTaGCAGCCAGGTTTTTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: LVNTLYSCLCEWPQRPNWGASDD*QPGFCL Trigger: CAAACAAAAACCTGGCTGTCAGTCATCAGAAGCCCC...CCAATTTGGCCTTTGGGGCCACTCACACAGACATGAATACAGTGTATTTACCAG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGTAGCTAAGCATTTAGCCAATCCAGCACGAGGCCATGAGGAGCTGTCAGAGTCAGAGATGTTAAAATaGAACGGGCTGTTGTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: QVAKHLANPARGHEELSESEMLK*NGLLLE Trigger: CTCTAACAACAGCCCGTTGCATTTTAACATCTCTGA...CTCTGACAGCTCCTCATGGCCTCGTGCTGGATTGGCTAAATGCTTAGCTACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR CAA 90 bp | GCCATGAGGAGCTGTCAGTCAGAGATGTTAAAATGCAACGGGCTGTaGTTAGAGAGATGGATGCTGATTTGTCAACAGAGTCTCCACTCT | + |
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Preference number: 2 (lower is better) Translates to: AMRSCQSEMLKCNGL*LERWMLICQQSLHS Trigger: AGAGTGGAGACTCTGTTGACAAATCAGCATCCATCTCTCTAACAACAGCCCGTTGCATTTTAACATCTCTGACTGACAGCTCCTCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAAAATACTCAAGACCAGCCTGTGCTGCAAAAGACCCTGTCTTGGATATATATCCAGCACGAGGCCATaGGGAGCTGTCAGTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: IKILKTSLCCKRPCLGYISSTRP*GAVSQR Trigger: TCTCTGACTGACAGCTCCTCATGGCCTCGTGCTGGA...TATATATCCAAGACAGGGTCTTTTGCAGCACAGGCTGGTCTTGAGTATTTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTTTAGCACAAGCAATGAACTCTATACTAGTCAAACATACATCAGTACTGGCACAGAGTCTCCACTCTaGTGGGAGACAGGAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LFSTSNELYTSQTYISTGTESPL*WETGGG Trigger: CCCTCCTCCTGTCTCCCAGCAGAGTGGAGACTCTGT...GCCAGTACTGATGTATGTTTGACTAGTATAGAGTTCATTGCTTGTGCTAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAAAATACTCAAGACCAGCCTGTGCTGCAAAAGACCCTGTCTTGGATATATAGGGGCTTCTGATGACTaGCAGCCAGGTTTTTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: IKILKTSLCCKRPCLGYIGASDD*QPGFCL Trigger: CAAACAAAAACCTGGCTGTCAGTCATCAGAAGCCCC...TATATATCCAAGACAGGGTCTTTTGCAGCACAGGCTGGTCTTGAGTATTTTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR CCA 90 bp | GCTACAGGCACAATAAGAGAAGACAGGGATGGTGAGTGTGATCGGAGTGGGAAACAAAAGACCCTGTCTTaGATATATAAAAACCAACCA | + |
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Preference number: 2 (lower is better) Translates to: ATGTIREDRDGECDRSGKQKTLS*IYKNQP Trigger: TGGTTGGTTTTTATATATCCAAGACAGGGTCTTTTG...TTTCCCACTCCGATCACACTCACCATCCCTGTCTTCTCTTATTGTGCCTGTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGCACAAGCAATGAACTCTATACTAGTCAAACATACATCAGTACTGGCTAAGTCTGCTTTGCTAATTTaGAACTGCTCCCCATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LAQAMNSILVKHTSVLAKSALLI*NCSPSP Trigger: GGGAGATGGGGAGCAGTTTCAAATTAGCAAAGCAGA...CTTAGCCAGTACTGATGTATGTTTGACTAGTATAGAGTTCATTGCTTGTGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTAAATACACTGTATTCATGTCTGTGTGAGTGGCCCCAAAGGCCAAATTGGGCACATCTTGGACAATaGAATCTCAACATTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LVNTLYSCLCEWPQRPNWAHLGQ*NLNIKK Trigger: TTTCTTAATGTTGAGATTCCATTGTCCAAGATGTGC...CCAATTTGGCCTTTGGGGCCACTCACACAGACATGAATACAGTGTATTTACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR CAA 90 bp | GATTTCAAATGTATGGCACTCTATAAACACTTGTCAACACCCAGGTaGTTTAGCACAAGCAATGAACTCTATACTAGTCAAACATACATC | + |
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Preference number: 2 (lower is better) Translates to: DFKCMALYKHLSTPR*FSTSNELYTSQTYI Trigger: GATGTATGTTTGACTAGTATAGAGTTCATTGCTTGTGCTAAACAACCTGGGTGTTGACAAGTGTTTATAGAGTGCCATACATTTGAAATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAACATTAAGAAAAATCAATCGAGGACATGGATATTTCTCACAGGCATATTGTCAGAGATGTTAAAATaGAACGGGCTGTTGTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: LNIKKNQSRTWIFLTGILSEMLK*NGLLLE Trigger: CTCTAACAACAGCCCGTTGCATTTTAACATCTCTGA...CAATATGCCTGTGAGAAATATCCATGTCCTCGATTGATTTTTCTTAATGTTGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAACATTAAGAAAAATCAATCGAGGACATGGATATTTCTCACAGGCATATTGAATTTCCAGGTCCACTaGAGTTGCTACATGATAAAG | + |
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Preference number: 2 (lower is better) Translates to: LNIKKNQSRTWIFLTGILNFQVH*SCYMIK Trigger: CTTTATCATGTAGCAACTCCAGTGGACCTGGAAATT...CAATATGCCTGTGAGAAATATCCATGTCCTCGATTGATTTTTCTTAATGTTGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR CAA 90 bp | GCTACAGGCACAATAAGAGAAGACAGGGATGGTGAGTGTGATCGGAGTGGGAAACCAGGTCCACTGGAGTaGCTACATGATAAAGCCATA | + |
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Preference number: 3 (lower is better) Translates to: ATGTIREDRDGECDRSGKPGPLE*LHDKAI Trigger: TATGGCTTTATCATGTAGCAACTCCAGTGGACCTGG...TTTCCCACTCCGATCACACTCACCATCCCTGTCTTCTCTTATTGTGCCTGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR GCA 72 bp | GAGGCCATGAGGAGCTGTCAGTCAGAGATGTTAAAATaGAACGGGCTGTTGTTAGAGAGATGGATGCTGATT | + |
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Preference number: 3 (lower is better) Translates to: EAMRSCQSEMLK*NGLLLERWMLI Trigger: AATCAGCATCCATCTCTCTAACAACAGCCCGTTGCATTTTAACATCTCTGACTGACAGCTCCTCATGGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGTAAATACACTGTATTCATGTCTGTGTGAGTGGCCCCAAAGGCCAAATTGGTTCTGCTTTGCTAATTaGAAACTGCTCCCCATCTCC | + |
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Preference number: 3 (lower is better) Translates to: LVNTLYSCLCEWPQRPNWFCFAN*KLLPIS Trigger: GGAGATGGGGAGCAGTTTCAAATTAGCAAAGCAGAA...CCAATTTGGCCTTTGGGGCCACTCACACAGACATGAATACAGTGTATTTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR CAA 90 bp | GCTACAGGCACAATAAGAGAAGACAGGGATGGTGAGTGTGATCGGAGTGGGAAATTTCTCACAGGCATATaGCTAGGTAAAAGCCAATCT | + |
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Preference number: 3 (lower is better) Translates to: ATGTIREDRDGECDRSGKFLTGI*LGKSQS Trigger: AGATTGGCTTTTACCTAGCAATATGCCTGTGAGAAA...TTTCCCACTCCGATCACACTCACCATCCCTGTCTTCTCTTATTGTGCCTGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR CCA 72 bp | GAGATGTTAAAATGCAACGGGCTGTTGTTAGAGAGATaGATGCTGATTTGTCAACAGAGTCTCCACTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: EMLKCNGLLLER*MLICQQSLHSA Trigger: AGCAGAGTGGAGACTCTGTTGACAAATCAGCATCCATCTCTCTAACAACAGCCCGTTGCATTTTAACATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR-3UTR CAA 90 bp | ATTAAAATACTCAAGACCAGCCTGTGCTGCAAAAGACCCTGTCTTGGATATATATTCATAAGGCACATCTaGGACAATGGAATCTCAACA | + |
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Preference number: 3 (lower is better) Translates to: IKILKTSLCCKRPCLGYIFIRHI*DNGIST Trigger: TGTTGAGATTCCATTGTCCAAGATGTGCCTTATGAA...TATATATCCAAGACAGGGTCTTTTGCAGCACAGGCTGGTCTTGAGTATTTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR CCA 72 bp | TGGAATCTCAACATTAAGAAAAATCAATCGAGGACATaGATATTTCTCACAGGCATATTGCTAGGTAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: WNLNIKKNQSRT*IFLTGILLGKS Trigger: GCTTTTACCTAGCAATATGCCTGTGAGAAATATCCATGTCCTCGATTGATTTTTCTTAATGTTGAGATTCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| 3UTR CCA 72 bp | GTAATAGCATCAATTCATAAGGCACATCTTGGACAATaGAATCTCAACATTAAGAAAAATCAATCGAGGACA | + |
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Preference number: 3 (lower is better) Translates to: VIASIHKAHLGQ*NLNIKKNQSRT Trigger: TGTCCTCGATTGATTTTTCTTAATGTTGAGATTCCATTGTCCAAGATGTGCCTTATGAATTGATGCTATTAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR GCA 90 bp | GAGAGATGGATGCTGATTTGTCAACAGAGTCTCCACTCTGCTGGGAGACAGGAGTGGGCGGAGGACAGGTaGTTGGTATGGTTCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: ERWMLICQQSLHSAGRQEWAEDR*LVWFWL Trigger: CAACCAGAACCATACCAAGCACCTGTCCTCCGCCCA...CTCCTGTCTCCCAGCAGAGTGGAGACTCTGTTGACAAATCAGCATCCATCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR GCA 90 bp | GAGAGATGGATGCTGATTTGTCAACAGAGTCTCCACTCTGCTGGGAGACAGGAGGATTTCTTGGGACCCTaGTTCATTCTGGCCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: ERWMLICQQSLHSAGRQEDFLGP*FILASR Trigger: TCGGGAGGCCAGAATGAAGCAGGGTCCCAAGAAATC...CTCCTGTCTCCCAGCAGAGTGGAGACTCTGTTGACAAATCAGCATCCATCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CCA 90 bp | GTAGCTAAGCATTTAGCCAATCCAGCACGAGGCCATGAGGAGCTGTCAGAGATGACCATCTGGATCCAGTaGCTTGTGGCAGAAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VAKHLANPARGHEELSEMTIWIQ*LVAERP Trigger: AGGCCTTTCTGCCACAAGCCACTGGATCCAGATGGT...CATCTCTGACAGCTCCTCATGGCCTCGTGCTGGATTGGCTAAATGCTTAGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CCA 90 bp | GCTACAGGCACAATAAGAGAAGACAGGGATGGTGAGTGTGATCGGAGTGGGAAAGGGAGCTGCCTGCCATaGACAACACACCATCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: ATGTIREDRDGECDRSGKGSCLP*TTHHLD Trigger: ATCCAGATGGTGTGTTGTCCATGGCAGGCAGCTCCC...TTTCCCACTCCGATCACACTCACCATCCCTGTCTTCTCTTATTGTGCCTGTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR GCA 90 bp | GAGAGATGGATGCTGATTTGTCAACAGAGTCTCCACTCTGCTGGGAGACAGGAGAATCCTTGCCCAGGCTaGAAATGTGGACTCCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: ERWMLICQQSLHSAGRQENPCPG*KCGLLR Trigger: CCTAAGGAGTCCACATTTGCAGCCTGGGCAAGGATT...CTCCTGTCTCCCAGCAGAGTGGAGACTCTGTTGACAAATCAGCATCCATCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR GCA 90 bp | AGGAGCTGTCAGTCAGAGATGTTAAAATGCAACGGGCTGTTGTTAGAGAGATGGCTGCAGGGAGCTGCCTaGCATGGACAACACACCATC | + |
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Preference number: 4 (lower is better) Translates to: RSCQSEMLKCNGLLLERWLQGAA*HGQHTI Trigger: GATGGTGTGTTGTCCATGGCAGGCAGCTCCCTGCAG...CCATCTCTCTAACAACAGCCCGTTGCATTTTAACATCTCTGACTGACAGCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR GCA 90 bp | GCTACAGGCACAATAAGAGAAGACAGGGATGGTGAGTGTGATCGGAGTGGGAAATTATCTGCAGGGAGCTaGCTGCCATGGACAACACAC | + |
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Preference number: 4 (lower is better) Translates to: ATGTIREDRDGECDRSGKLSAGS*LPWTTH Trigger: GTGTGTTGTCCATGGCAGGCAGCTCCCTGCAGATAA...TTTCCCACTCCGATCACACTCACCATCCCTGTCTTCTCTTATTGTGCCTGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CCA 90 bp | CAGGTAGCTAAGCATTTAGCCAATCCAGCACGAGGCCATGAGGAGCTGTCAGAGAGCGTAGTCTGTGTTTaGCTCCTCCTCCTCCTTAAA | + |
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Preference number: 4 (lower is better) Translates to: QVAKHLANPARGHEELSESVVCV*LLLLLK Trigger: TTTAAGGAGGAGGAGGAGCCAAACACAGACTACGCT...CTCTGACAGCTCCTCATGGCCTCGTGCTGGATTGGCTAAATGCTTAGCTACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR GCA 90 bp | AGGAGCTGTCAGTCAGAGATGTTAAAATGCAACGGGCTGTTGTTAGAGAGATGGTGGGCGGAGGACAGGTaGTTGGTATGGTTCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RSCQSEMLKCNGLLLERWWAEDR*LVWFWL Trigger: CAACCAGAACCATACCAAGCACCTGTCCTCCGCCCA...CCATCTCTCTAACAACAGCCCGTTGCATTTTAACATCTCTGACTGACAGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCTGTCAGTCAGAGATGTTAAAATGCAACGGGCTGTTGTTAGAGAGATGGACTGAGCTGCTCTCATaGCAATCCTTGCCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RSCQSEMLKCNGLLLERWTELLS*QSLPRL Trigger: CAGCCTGGGCAAGGATTGCCATGAGAGCAGCTCAGT...CCATCTCTCTAACAACAGCCCGTTGCATTTTAACATCTCTGACTGACAGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CCA 90 bp | GATGCAAATCCAGCACGAGGCCATGAGGAGCTGTCAGTCAGAGATGTTAAAATGGGACAACACACCATCTaGATCCAGTGGCTTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: DANPARGHEELSVRDVKMGQHTI*IQWLVA Trigger: TGCCACAAGCCACTGGATCCAGATGGTGTGTTGTCC...CATTTTAACATCTCTGACTGACAGCTCCTCATGGCCTCGTGCTGGATTTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CCA 90 bp | CTGTTGTTAGAGAGATGGATGCTGATTTGTCAACAGAGTCTCCACTCTGCTGGGGGACAACACACCATCTaGATCCAGTGGCTTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LLLERWMLICQQSLHSAGGQHTI*IQWLVA Trigger: TGCCACAAGCCACTGGATCCAGATGGTGTGTTGTCC...CCCAGCAGAGTGGAGACTCTGTTGACAAATCAGCATCCATCTCTCTAACAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR TCA 90 bp | CAGGTAGCTAAGCATTTAGCCAATCCAGCACGAGGCCATGAGGAGCTGTCAGAGATCTTCTTGTTGCTGTaGACACATTCAGGACATAGC | + |
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Preference number: 4 (lower is better) Translates to: QVAKHLANPARGHEELSEIFLLL*THSGHS Trigger: GCTATGTCCTGAATGTGTTCACAGCAACAAGAAGAT...CTCTGACAGCTCCTCATGGCCTCGTGCTGGATTGGCTAAATGCTTAGCTACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CCA 90 bp | GAGAGATGGATGCTGATTTGTCAACAGAGTCTCCACTCTGCTGGGAGACAGGAGTGGTATGGTTCTGGTTaGGTGTTTGATTCCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: ERWMLICQQSLHSAGRQEWYGSG*VFDSSM Trigger: CATGCTGGAATCAAACACCCAACCAGAACCATACCA...CTCCTGTCTCCCAGCAGAGTGGAGACTCTGTTGACAAATCAGCATCCATCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CCA 90 bp | GTAGCTAAGCATTTAGCCAATCCAGCACGAGGCCATGAGGAGCTGTCAGAGATGCTATCTTGGATTTCTTaGGACCCTGCTTCATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VAKHLANPARGHEELSEMLSWIS*DPASFW Trigger: CCAGAATGAAGCAGGGTCCCAAGAAATCCAAGATAG...CATCTCTGACAGCTCCTCATGGCCTCGTGCTGGATTGGCTAAATGCTTAGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CCA 90 bp | GGTGTTGTTAGAGTGATGCAAATCCAGCACGAGGCCATGAGGAGCTGTCAGTCAAGAAAATTCATCCTTTaGGGAGTGTCTGGAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: GVVRVMQIQHEAMRSCQSRKFIL*GVSGTQ Trigger: CTGGGTTCCAGACACTCCCCAAAGGATGAATTTTCT...TGACTGACAGCTCCTCATGGCCTCGTGCTGGATTTGCATCACTCTAACAACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CCA 90 bp | TGTCAGTCAGAGATGTTAAAATGCAACGGGCTGTTGTTAGAGAGATGGATGCTGACCATCTGGATCCAGTaGCTTGTGGCAGAAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: CQSEMLKCNGLLLERWMLTIWIQ*LVAERP Trigger: AGGCCTTTCTGCCACAAGCCACTGGATCCAGATGGT...CAGCATCCATCTCTCTAACAACAGCCCGTTGCATTTTAACATCTCTGACTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CCA 90 bp | GCTACAGGCACAATAAGAGAAGACAGGGATGGTGAGTGTGATCGGAGTGGGAAAAGAAAATTCATCCTTTaGGGAGTGTCTGGAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: ATGTIREDRDGECDRSGKRKFIL*GVSGTQ Trigger: CTGGGTTCCAGACACTCCCCAAAGGATGAATTTTCT...TTTCCCACTCCGATCACACTCACCATCCCTGTCTTCTCTTATTGTGCCTGTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR GCA 90 bp | TGTCAGTCAGAGATGTTAAAATGCAACGGGCTGTTGTTAGAGAGATGGATGCTGAATCCTTGCCCAGGCTaGAAATGTGGACTCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CQSEMLKCNGLLLERWMLNPCPG*KCGLLR Trigger: CCTAAGGAGTCCACATTTGCAGCCTGGGCAAGGATT...CAGCATCCATCTCTCTAACAACAGCCCGTTGCATTTTAACATCTCTGACTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTAAATACACTGTATTCATGTCTGTGTGAGTGGCCCCAAAGGCCAAATTGGAGCGTAGTCTGTGTTTaGCTCCTCCTCCTCCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVNTLYSCLCEWPQRPNWSVVCV*LLLLLK Trigger: TTTAAGGAGGAGGAGGAGCCAAACACAGACTACGCT...CCAATTTGGCCTTTGGGGCCACTCACACAGACATGAATACAGTGTATTTACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGATGGATGCTGATTTGTCAACAGAGTCTCCACTCTGCTGGGAGACAGGAGCCTCCCGAGATGTATTaGGAATATAACATTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ERWMLICQQSLHSAGRQEPPEMY*EYNILV Trigger: AACAAGAATGTTATATTCCCAATACATCTCGGGAGG...CTCCTGTCTCCCAGCAGAGTGGAGACTCTGTTGACAAATCAGCATCCATCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CCA 90 bp | ATTAAAATACTCAAGACCAGCCTGTGCTGCAAAAGACCCTGTCTTGGATATATAACTGAGCTGCTCTCATaGCAATCCTTGCCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IKILKTSLCCKRPCLGYITELLS*QSLPRL Trigger: CAGCCTGGGCAAGGATTGCCATGAGAGCAGCTCAGT...TATATATCCAAGACAGGGTCTTTTGCAGCACAGGCTGGTCTTGAGTATTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTAAATACACTGTATTCATGTCTGTGTGAGTGGCCCCAAAGGCCAAATTGGATCTTCTTGTTGCTGTaGACACATTCAGGACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVNTLYSCLCEWPQRPNWIFLLL*THSGHS Trigger: GCTATGTCCTGAATGTGTTCACAGCAACAAGAAGAT...CCAATTTGGCCTTTGGGGCCACTCACACAGACATGAATACAGTGTATTTACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR GCA 90 bp | CTCAACATTAAGAAAAATCAATCGAGGACATGGATATTTCTCACAGGCATATTGCTGCAGGGAGCTGCCTaGCATGGACAACACACCATC | + |
|
Preference number: 4 (lower is better) Translates to: LNIKKNQSRTWIFLTGILLQGAA*HGQHTI Trigger: GATGGTGTGTTGTCCATGGCAGGCAGCTCCCTGCAG...CAATATGCCTGTGAGAAATATCCATGTCCTCGATTGATTTTTCTTAATGTTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTGTTAGAGAGATGGATGCTGATTTGTCAACAGAGTCTCCACTCTGCTGGGAAGTTTTCCTCAGATTaGTTCTCGTTGAAAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLERWMLICQQSLHSAGKFSSD*FSLKVS Trigger: GGAGACTTTCAACGAGAACCAATCTGAGGAAAACTT...CCCAGCAGAGTGGAGACTCTGTTGACAAATCAGCATCCATCTCTCTAACAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CCA 90 bp | GCTAAGCATTTAGCCAATCCAGCACGAGGCCATGAGGAGCTGTCAGAGATGTTACCTCCCGAGATGTATTaGGAATATAACATTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AKHLANPARGHEELSEMLPPEMY*EYNILV Trigger: AACAAGAATGTTATATTCCCAATACATCTCGGGAGG...TAACATCTCTGACAGCTCCTCATGGCCTCGTGCTGGATTGGCTAAATGCTTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CCA 90 bp | ATTAAAATACTCAAGACCAGCCTGTGCTGCAAAAGACCCTGTCTTGGATATATAGGATCCAGTGGCTTGTaGCAGAAAGGCCTCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: IKILKTSLCCKRPCLGYIGSSGL*QKGLHI Trigger: AATGTGGAGGCCTTTCTGCCACAAGCCACTGGATCC...TATATATCCAAGACAGGGTCTTTTGCAGCACAGGCTGGTCTTGAGTATTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CCA 90 bp | GGTTGTTTAGCACAAGCAATGAACTCTATACTAGTCAAACATACATCAGTACTGGGGAGCTGCCTGCCATaGACAACACACCATCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GCLAQAMNSILVKHTSVLGSCLP*TTHHLD Trigger: ATCCAGATGGTGTGTTGTCCATGGCAGGCAGCTCCC...CAGTACTGATGTATGTTTGACTAGTATAGAGTTCATTGCTTGTGCTAAACAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR GCA 90 bp | GGTTGTTTAGCACAAGCAATGAACTCTATACTAGTCAAACATACATCAGTACTGGATTTCTTGGGACCCTaGTTCATTCTGGCCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GCLAQAMNSILVKHTSVLDFLGP*FILASR Trigger: TCGGGAGGCCAGAATGAAGCAGGGTCCCAAGAAATC...CAGTACTGATGTATGTTTGACTAGTATAGAGTTCATTGCTTGTGCTAAACAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR GCA 90 bp | GGTTGTTTAGCACAAGCAATGAACTCTATACTAGTCAAACATACATCAGTACTGTTATCTGCAGGGAGCTaGCTGCCATGGACAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: GCLAQAMNSILVKHTSVLLSAGS*LPWTTH Trigger: GTGTGTTGTCCATGGCAGGCAGCTCCCTGCAGATAA...CAGTACTGATGTATGTTTGACTAGTATAGAGTTCATTGCTTGTGCTAAACAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CCA 90 bp | TTGTTTAGCACAAGCAATGAACTCTATACTAGTCAAACATACATCAGTACTGGCGGATCCAGTGGCTTGTaGCAGAAAGGCCTCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: LFSTSNELYTSQTYISTGGSSGL*QKGLHI Trigger: AATGTGGAGGCCTTTCTGCCACAAGCCACTGGATCC...GCCAGTACTGATGTATGTTTGACTAGTATAGAGTTCATTGCTTGTGCTAAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| 3UTR CAA 72 bp | AGCTGTCAGTCAGAGATGTTAAAATGCAACGGGCTGTaGTTAGAGAGATGGATGCTGATTTGTCAACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SCQSEMLKCNGL*LERWMLICQQS Trigger: ACTCTGTTGACAAATCAGCATCCATCTCTCTAACAACAGCCCGTTGCATTTTAACATCTCTGACTGACAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTTAGCACAAGCAATGAACTCTATACTAGTCAAACATACATCAGTACTGGCTGTTTGATTCCAGCATaGCTCACCAGAGAACGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSTSNELYTSQTYISTGCLIPA*LTRERA Trigger: AGCCCGTTCTCTGGTGAGGCATGCTGGAATCAAACA...GCCAGTACTGATGTATGTTTGACTAGTATAGAGTTCATTGCTTGTGCTAAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR GCA 90 bp | TGTCAGTCAGAGATGTTAAAATGCAACGGGCTGTTGTTAGAGAGATGGATGCTGAGACCTCAACTTTCTTaGCATCCGTACTCAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CQSEMLKCNGLLLERWMLRPQLS*HPYSSY Trigger: ATAACTTGAGTACGGATGGCAAGAAAGTTGAGGTCT...CAGCATCCATCTCTCTAACAACAGCCCGTTGCATTTTAACATCTCTGACTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR GCA 90 bp | CTCAACATTAAGAAAAATCAATCGAGGACATGGATATTTCTCACAGGCATATTGTGTTTGATTCCAGCATaGCTCACCAGAGAACGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNIKKNQSRTWIFLTGILCLIPA*LTRERA Trigger: AGCCCGTTCTCTGGTGAGGCATGCTGGAATCAAACA...CAATATGCCTGTGAGAAATATCCATGTCCTCGATTGATTTTTCTTAATGTTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CCA 90 bp | TGTATGGCACTCTATAAACACTTGTCAACACCCAGGTTGTTTAGCACAAGCAATAAGTTTTCCTCAGATTaGTTCTCGTTGAAAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CMALYKHLSTPRLFSTSNKFSSD*FSLKVS Trigger: GGAGACTTTCAACGAGAACCAATCTGAGGAAAACTT...ATTGCTTGTGCTAAACAACCTGGGTGTTGACAAGTGTTTATAGAGTGCCATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CCA 90 bp | CTCAACATTAAGAAAAATCAATCGAGGACATGGATATTTCTCACAGGCATATTGCTATCTTGGATTTCTTaGGACCCTGCTTCATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNIKKNQSRTWIFLTGILLSWIS*DPASFW Trigger: CCAGAATGAAGCAGGGTCCCAAGAAATCCAAGATAG...CAATATGCCTGTGAGAAATATCCATGTCCTCGATTGATTTTTCTTAATGTTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| 3UTR CAA 72 bp | CTATATGATTTCAAATGTATGGCACTCTATAAACACTaGTCAACACCCAGGTTGTTTAGCACAAGCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LYDFKCMALYKH*STPRLFSTSNE Trigger: TTCATTGCTTGTGCTAAACAACCTGGGTGTTGACAAGTGTTTATAGAGTGCCATACATTTGAAATCATATAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS TCA 90 bp | GGCTGGGCGGAGGACAGGTGCTTGGTATGGTTCTGGTTGGGTGTTTaGTTCCAGCATGCCTCACCAGAGAACGGGCTGGTGGTGTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GWAEDRCLVWFWLGV*FQHASPENGLVVCG Trigger: ACCACACACCACCAGCCCGTTCTCTGGTGAGGCATGCTGGAATCAAACACCCAACCAGAACCATACCAAGCACCTGTCCTCCGCCCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS CCA 90 bp | GGACACGTCCCTAATAGGAGGCAGGCTGGGCGGAGGACAGGTGCTTaGTATGGTTCTGGTTGGGTGTTTGATTCCAGCATGCCTCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GHVPNRRQAGRRTGA*YGSGWVFDSSMPHQ Trigger: CTGGTGAGGCATGCTGGAATCAAACACCCAACCAGAACCATACCAAGCACCTGTCCTCCGCCCAGCCTGCCTCCTATTAGGGACGTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS CCA 90 bp | TGCAGGCGAACCCAACCTTTCTTATCTGCAGGGAGCTGCCTGCCATaGACAACACACCATCTGGATCCAGTGGCTTGTGGCAGAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CRRTQPFLSAGSCLP*TTHHLDPVACGRKA Trigger: GGCCTTTCTGCCACAAGCCACTGGATCCAGATGGTGTGTTGTCCATGGCAGGCAGCTCCCTGCAGATAAGAAAGGTTGGGTTCGCCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CAA 90 bp | GGTGTTGTTAGAGTGATGCAAATCCAGCACGAGGCCATGAGGAGCTGTCAGTCACTCCTCCTTTTTCCTTaGGCACCCGCTTGGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GVVRVMQIQHEAMRSCQSLLLFP*APAWRP Trigger: GGGCCTCCAAGCGGGTGCCAAAGGAAAAAGGAGGAG...TGACTGACAGCTCCTCATGGCCTCGTGCTGGATTTGCATCACTCTAACAACACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS GCA 90 bp | GGACAGGTGCTTGGTATGGTTCTGGTTGGGTGTTTGATTCCAGCATaGCTCACCAGAGAACGGGCTGGTGGTGTGTGGTCTAAGGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GQVLGMVLVGCLIPA*LTRERAGGVWSKVE Trigger: TTCAACCTTAGACCACACACCACCAGCCCGTTCTCTGGTGAGGCATGCTGGAATCAAACACCCAACCAGAACCATACCAAGCACCTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS TCA 90 bp | TCTCCTCCTTTTTCCTTTGGCACCCGCTTGGAGGCCCGATTCCTCTaGAGACTATCTTGGATTTCTTGGGACCCTGCTTCATTCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPPFSFGTRLEARFL*RLSWISWDPASFWP Trigger: AGGCCAGAATGAAGCAGGGTCCCAAGAAATCCAAGATAGTCTTCAGAGGAATCGGGCCTCCAAGCGGGTGCCAAAGGAAAAAGGAGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CAA 90 bp | GATGCAAATCCAGCACGAGGCCATGAGGAGCTGTCAGTCAGAGATGTTAAAATGTCTGGATCCAGTGGCTaGTGGCAGAAAGGCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: DANPARGHEELSVRDVKMSGSSG*WQKGLH Trigger: GTGGAGGCCTTTCTGCCACAAGCCACTGGATCCAGA...CATTTTAACATCTCTGACTGACAGCTCCTCATGGCCTCGTGCTGGATTTGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGATGGATGCTGATTTGTCAACAGAGTCTCCACTCTGCTGGGAGACAGGAGCCTCTGAAGACTATCTaGGATTTCTTGGGACCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ERWMLICQQSLHSAGRQEPLKTI*DFLGPC Trigger: GCAGGGTCCCAAGAAATCCAAGATAGTCTTCAGAGG...CTCCTGTCTCCCAGCAGAGTGGAGACTCTGTTGACAAATCAGCATCCATCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS-3UTR CAA 90 bp | TGTCAGTCAGAGATGTTAAAATGCAACGGGCTGTTGTTAGAGAGATGGATGCTGCTCCTCCTTTTTCCTTaGGCACCCGCTTGGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CQSEMLKCNGLLLERWMLLLLFP*APAWRP Trigger: GGGCCTCCAAGCGGGTGCCAAAGGAAAAAGGAGGAG...CAGCATCCATCTCTCTAACAACAGCCCGTTGCATTTTAACATCTCTGACTGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTAGCTAAGCATTTAGCCAATCCAGCACGAGGCCATGAGGAGCTGTCAGAGCAAGTTTTCCTCAGATaGGTTCTCGTTGAAAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QVAKHLANPARGHEELSEQVFLR*VLVESL Trigger: GAGACTTTCAACGAGAACCAATCTGAGGAAAACTTG...CTCTGACAGCTCCTCATGGCCTCGTGCTGGATTGGCTAAATGCTTAGCTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CAA 90 bp | GTAGCTAAGCATTTAGCCAATCCAGCACGAGGCCATGAGGAGCTGTCAGAGATGACTATCTTGGATTTCTaGGGACCCTGCTTCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VAKHLANPARGHEELSEMTILDF*GPCFIL Trigger: CAGAATGAAGCAGGGTCCCAAGAAATCCAAGATAGT...CATCTCTGACAGCTCCTCATGGCCTCGTGCTGGATTGGCTAAATGCTTAGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTGTTAGAGAGATGGATGCTGATTTGTCAACAGAGTCTCCACTCTGCTGGGGAGAAAATTCATCCTTaGGGGAGTGTCTGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLERWMLICQQSLHSAGEKIHP*GSVWNP Trigger: TGGGTTCCAGACACTCCCCAAAGGATGAATTTTCTC...CCCAGCAGAGTGGAGACTCTGTTGACAAATCAGCATCCATCTCTCTAACAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CAA 90 bp | GATGCAAATCCAGCACGAGGCCATGAGGAGCTGTCAGTCAGAGATGTTAAAATGGAGAAAATTCATCCTTaGGGGAGTGTCTGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: DANPARGHEELSVRDVKMEKIHP*GSVWNP Trigger: TGGGTTCCAGACACTCCCCAAAGGATGAATTTTCTC...CATTTTAACATCTCTGACTGACAGCTCCTCATGGCCTCGTGCTGGATTTGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTTAGCACAAGCAATGAACTCTATACTAGTCAAACATACATCAGTACTGGCTCTGGATCCAGTGGCTaGTGGCAGAAAGGCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LFSTSNELYTSQTYISTGSGSSG*WQKGLH Trigger: GTGGAGGCCTTTCTGCCACAAGCCACTGGATCCAGA...GCCAGTACTGATGTATGTTTGACTAGTATAGAGTTCATTGCTTGTGCTAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CAA 90 bp | TCAACATTAAGAAAAATCAATCGAGGACATGGATATTTCTCACAGGCATATTGCCTCTCATGGCAATCCTaGCCCAGGCTGCAAATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: STLRKINRGHGYFSQAYCLSWQS*PRLQMW Trigger: CCACATTTGCAGCCTGGGCAAGGATTGCCATGAGAG...GCAATATGCCTGTGAGAAATATCCATGTCCTCGATTGATTTTTCTTAATGTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CAA 90 bp | TCAACATTAAGAAAAATCAATCGAGGACATGGATATTTCTCACAGGCATATTGCCCTCTGAAGACTATCTaGGATTTCTTGGGACCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: STLRKINRGHGYFSQAYCPLKTI*DFLGPC Trigger: GCAGGGTCCCAAGAAATCCAAGATAGTCTTCAGAGG...GCAATATGCCTGTGAGAAATATCCATGTCCTCGATTGATTTTTCTTAATGTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS TCA 90 bp | GCACGGCTTCTAATTTTAAAGTTTCTTAGGATCTTCTTGTTGCTGTaGACACATTCAGGACATAGCAAATTATCTTCCACTCCTGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARLLILKFLRIFLLL*THSGHSKLSSTPGS Trigger: AGAACCAGGAGTGGAAGATAATTTGCTATGTCCTGAATGTGTTCACAGCAACAAGAAGATCCTAAGAAACTTTAAAATTAGAAGCCGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CAA 90 bp | TCAACATTAAGAAAAATCAATCGAGGACATGGATATTTCTCACAGGCATATTGCCAAGTTTTCCTCAGATaGGTTCTCGTTGAAAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: STLRKINRGHGYFSQAYCQVFLR*VLVESL Trigger: GAGACTTTCAACGAGAACCAATCTGAGGAAAACTTG...GCAATATGCCTGTGAGAAATATCCATGTCCTCGATTGATTTTTCTTAATGTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CAA 90 bp | TTAGCACAAGCAATGAACTCTATACTAGTCAAACATACATCAGTACTGGCTAAGGTGTGTGGTCTAAGGTaGAAGAAGAAACATTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LAQAMNSILVKHTSVLAKVCGLR*KKKHLI Trigger: AATCAAATGTTTCTTCTTCAACCTTAGACCACACAC...CTTAGCCAGTACTGATGTATGTTTGACTAGTATAGAGTTCATTGCTTGTGCTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS-3UTR CAA 90 bp | TCAACATTAAGAAAAATCAATCGAGGACATGGATATTTCTCACAGGCATATTGCGTGTGTGGTCTAAGGTaGAAGAAGAAACATTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: STLRKINRGHGYFSQAYCVCGLR*KKKHLI Trigger: AATCAAATGTTTCTTCTTCAACCTTAGACCACACAC...GCAATATGCCTGTGAGAAATATCCATGTCCTCGATTGATTTTTCTTAATGTTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS CAA 90 bp | AGGCTGGGCGGAGGACAGGTGCTTGGTATGGTTCTGGTTGGGTGTTaGATTCCAGCATGCCTCACCAGAGAACGGGCTGGTGGTGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RLGGGQVLGMVLVGC*IPACLTRERAGGVW Trigger: CCACACACCACCAGCCCGTTCTCTGGTGAGGCATGCTGGAATCAAACACCCAACCAGAACCATACCAAGCACCTGTCCTCCGCCCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS CCA 72 bp | GCTGGGCGGAGGACAGGTGCTTGGTATGGTTCTGGTTaGGTGTTTGATTCCAGCATGCCTCACCAGAGAACG | + |
|
Preference number: 6 (lower is better) Translates to: AGRRTGAWYGSG*VFDSSMPHQRT Trigger: CGTTCTCTGGTGAGGCATGCTGGAATCAAACACCCAACCAGAACCATACCAAGCACCTGTCCTCCGCCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS CCA 72 bp | CCTAATAGGAGGCAGGCTGGGCGGAGGACAGGTGCTTaGTATGGTTCTGGTTGGGTGTTTGATTCCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: PNRRQAGRRTGA*YGSGWVFDSSM Trigger: CATGCTGGAATCAAACACCCAACCAGAACCATACCAAGCACCTGTCCTCCGCCCAGCCTGCCTCCTATTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS CCA 72 bp | ACCCAACCTTTCTTATCTGCAGGGAGCTGCCTGCCATaGACAACACACCATCTGGATCCAGTGGCTTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TQPFLSAGSCLP*TTHHLDPVACG Trigger: GCCACAAGCCACTGGATCCAGATGGTGTGTTGTCCATGGCAGGCAGCTCCCTGCAGATAAGAAAGGTTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
||
| CDS CAA 72 bp | GGAGGACAGGTGCTTGGTATGGTTCTGGTTGGGTGTTaGATTCCAGCATGCCTCACCAGAGAACGGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GGQVLGMVLVGC*IPACLTRERAG Trigger: ACCAGCCCGTTCTCTGGTGAGGCATGCTGGAATCAAACACCCAACCAGAACCATACCAAGCACCTGTCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS CAA 72 bp | CACCCGCTTGGAGGCCCGATTCCTCTGAAGACTATCTaGGATTTCTTGGGACCCTGCTTCATTCTGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: HPLGGPIPLKTI*DFLGPCFILAS Trigger: GGAGGCCAGAATGAAGCAGGGTCCCAAGAAATCCAAGATAGTCTTCAGAGGAATCGGGCCTCCAAGCGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS CAA 72 bp | CCTGCCATGGACAACACACCATCTGGATCCAGTGGCTaGTGGCAGAAAGGCCTCCACATTAGACGGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: PAMDNTPSGSSG*WQKGLHIRRKR Trigger: CCTCTTCCGTCTAATGTGGAGGCCTTTCTGCCACAAGCCACTGGATCCAGATGGTGTGTTGTCCATGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS CAA 90 bp | AGGGAGCTGCCTGCCATGGACAACACACCATCTGGATCCAGTGGCTaGTGGCAGAAAGGCCTCCACATTAGACGGAAGAGGACATCGATT | + |
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Preference number: 6 (lower is better) Translates to: RELPAMDNTPSGSSG*WQKGLHIRRKRTSI Trigger: AATCGATGTCCTCTTCCGTCTAATGTGGAGGCCTTTCTGCCACAAGCCACTGGATCCAGATGGTGTGTTGTCCATGGCAGGCAGCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS GCA 72 bp | CTTGGTATGGTTCTGGTTGGGTGTTTGATTCCAGCATaGCTCACCAGAGAACGGGCTGGTGGTGTGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LGMVLVGCLIPA*LTRERAGGVWS Trigger: AGACCACACACCACCAGCCCGTTCTCTGGTGAGGCATGCTGGAATCAAACACCCAACCAGAACCATACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS CCA 72 bp | GCCATGGACAACACACCATCTGGATCCAGTGGCTTGTaGCAGAAAGGCCTCCACATTAGACGGAAGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: AMDNTPSGSSGL*QKGLHIRRKRT Trigger: TGTCCTCTTCCGTCTAATGTGGAGGCCTTTCTGCCACAAGCCACTGGATCCAGATGGTGTGTTGTCCATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS CCA 72 bp | AGAATTTCCAGGACACCACTCTCCTCCTTTTTCCTTTaGCACCCGCTTGGAGGCCCGATTCCTCTGAAGACT | + |
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Preference number: 6 (lower is better) Translates to: RISRTPLSSFFL*HPLGGPIPLKT Trigger: AGTCTTCAGAGGAATCGGGCCTCCAAGCGGGTGCCAAAGGAAAAAGGAGGAGAGTGGTGTCCTGGAAATTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS CAA 72 bp | GGAGGCCCGATTCCTCTGAAGACTATCTTGGATTTCTaGGGACCCTGCTTCATTCTGGCCTCCCGAGATGTA | + |
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Preference number: 6 (lower is better) Translates to: GGPIPLKTILDF*GPCFILASRDV Trigger: TACATCTCGGGAGGCCAGAATGAAGCAGGGTCCCAAGAAATCCAAGATAGTCTTCAGAGGAATCGGGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS TCA 72 bp | TTTTCCTTTGGCACCCGCTTGGAGGCCCGATTCCTCTaGAGACTATCTTGGATTTCTTGGGACCCTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: FSFGTRLEARFL*RLSWISWDPAS Trigger: TGAAGCAGGGTCCCAAGAAATCCAAGATAGTCTTCAGAGGAATCGGGCCTCCAAGCGGGTGCCAAAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS CCA 72 bp | GACACCACTCTCCTCCTTTTTCCTTTGGCACCCGCTTaGAGGCCCGATTCCTCTGAAGACTATCTTGGATTT | + |
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Preference number: 6 (lower is better) Translates to: DTTLLLFPLAPA*RPDSSEDYLGF Trigger: AAATCCAAGATAGTCTTCAGAGGAATCGGGCCTCCAAGCGGGTGCCAAAGGAAAAAGGAGGAGAGTGGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS CCA 72 bp | CCAGCATGCCTCACCAGAGAACGGGCTGGTGGTGTGTaGTCTAAGGTTGAAGAAGAAACATTTGATTGCGTA | + |
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Preference number: 6 (lower is better) Translates to: PACLTRERAGGV*SKVEEETFDCV Trigger: TACGCAATCAAATGTTTCTTCTTCAACCTTAGACCACACACCACCAGCCCGTTCTCTGGTGAGGCATGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS CCA 72 bp | ATACAGGCCGGTAACAGGAAGAGAAAATTCATCCTTTaGGGAGTGTCTGGAACCCAGGTCTGTCCAGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: IQAGNRKRKFIL*GVSGTQVCPAR Trigger: TCTTGCTGGACAGACCTGGGTTCCAGACACTCCCCAAAGGATGAATTTTCTCTTCCTGTTACCGGCCTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS GCA 72 bp | AGTGTCTCCGAAGTCTCAAATAGACCTCAACTTTCTTaGCATCCGTACTCAAGTTATGATACCGACACCACT | + |
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Preference number: 6 (lower is better) Translates to: SVSEVSNRPQLS*HPYSSYDTDTT Trigger: AGTGGTGTCGGTATCATAACTTGAGTACGGATGGCAAGAAAGTTGAGGTCTATTTGAGACTTCGGAGACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS CAA 90 bp | CTGCTTCATTCTGGCCTCCCGAGATGTATTGGGAATATAACATTCTaGTTTAGAATAGGAGTGTCTCCGAAGTCTCAAATAGACCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: LLHSGLPRCIGNITF*FRIGVSPKSQIDLN Trigger: GTTGAGGTCTATTTGAGACTTCGGAGACACTCCTATTCTAAACAAGAATGTTATATTCCCAATACATCTCGGGAGGCCAGAATGAAGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS CCA 72 bp | AAAATCACACTTTCTTCATCCAAGTTTTCCTCAGATTaGTTCTCGTTGAAAGTCTCCAGGCCGAAGTATGAC | + |
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Preference number: 6 (lower is better) Translates to: KITLSSSKFSSD*FSLKVSRPKYD Trigger: GTCATACTTCGGCCTGGAGACTTTCAACGAGAACCAATCTGAGGAAAACTTGGATGAAGAAAGTGTGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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| CDS CAA 72 bp | TCTGGCCTCCCGAGATGTATTGGGAATATAACATTCTaGTTTAGAATAGGAGTGTCTCCGAAGTCTCAAATA | + |
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Preference number: 6 (lower is better) Translates to: SGLPRCIGNITF*FRIGVSPKSQI Trigger: TATTTGAGACTTCGGAGACACTCCTATTCTAAACAAGAATGTTATATTCCCAATACATCTCGGGAGGCCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097175.5 ENSMUST00000232448.2 |
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