RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DPP8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032393

Ensembl transcript IDs: ENSMUST00000034960.14, ENSMUST00000167773.2, ENSMUST00000217434.2

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATAGCGCTCCGTGTATCCTGTATCATAGAAGATCCACAGGGTGACTaGGGCCCCAGCAATAGCCACCCGGAAGATATCCGACCTCTGCAT +
Preference number: 1 (lower is better)
Translates to: IALRVSCIIEDPQGD*GPSNSHPEDIRPLH
Trigger: ATGCAGAGGTCGGATATCTTCCGGGTGGCTATTGCTGGGGCCCCAGTCACCCTGTGGATCTTCTATGATACAGGATACACGGAGCGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR CCA 90 bp AGCCACGGTCAGTCAGCCTCACCACTTCTCCAGGGTTTGCATAACTaGTCACGTACAGGTGATGCTCCAAAGGAGAGTCTTTGGTGCCTT +
Preference number: 1 (lower is better)
Translates to: SHGQSASPLLQGLHN*SRTGDAPKESLWCL
Trigger: AAGGCACCAAAGACTCTCCTTTGGAGCATCACCTGTACGTGACCAGTTATGCAAACCCTGGAGAAGTGGTGAGGCTGACTGACCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR CCA 90 bp AGAGGAGTAACCGGTTTGGTTCTGAGGGGAACTTCTCCGCTTGCATaGCCACAGATCCTAAGTAGTAGCCCTGTTCATTCTGGTCAGGGT +
Preference number: 1 (lower is better)
Translates to: RGVTGLVLRGTSPLA*PQILSSSPVHSGQG
Trigger: ACCCTGACCAGAATGAACAGGGCTACTACTTAGGATCTGTGGCCATGCAAGCGGAGAAGTTCCCCTCAGAACCAAACCGGTTACTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR CCA 90 bp ACCTGCCATTTATCTCCAGGCTTCCCAAAGCATCCACCTCTATTCTaGCAGTCCCTGTCTTCACTGTGCTCTCTTGGAAAGGGACCTGAT +
Preference number: 1 (lower is better)
Translates to: TCHLSPGFPKHPPLF*QSLSSLCSLGKGPD
Trigger: ATCAGGTCCCTTTCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAGGTGGATGCTTTGGGAAGCCTGGAGATAAATGGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR TCA 90 bp TCTACTGGGATGAATAACTCAGGGGAGATCAGAACTATCTGCAGGTaGGTCTGGGAACGGTCTAGTAGGATGGACCAGGCATGTTTTCCC +
Preference number: 1 (lower is better)
Translates to: STGMNNSGEIRTICR*VWERSSRMDQACFP
Trigger: GGGAAAACATGCCTGGTCCATCCTACTAGACCGTTCCCAGACTCACCTGCAGATAGTTCTGATCTCCCCTGAGTTATTCATCCCAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 90 bp AGTGGAGCAGGTGCAGTTCATAGTGTTCTCCAGACTCAGGAACTCTaGTGCTGTGCCTCTCCTGAGGATAGATCTGTAAGTCATATGGCT +
Preference number: 1 (lower is better)
Translates to: SGAGAVHSVLQTQEL*CCASPEDRSVSHMA
Trigger: AGCCATATGACTTACAGATCTATCCTCAGGAGAGGCACAGCATCAGAGTTCCTGAGTCTGGAGAACACTATGAACTGCACCTGCTCCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR CCA 90 bp CCTGCACTAGAGTCTCCCCCTTCCCACTGTAACCCTTTTACCTCCTaGAAACTAGGGAACACTTTAATTAAGGAAAGGCCAGATGGAAAC +
Preference number: 1 (lower is better)
Translates to: PALESPPSHCNPFTS*KLGNTLIKERPDGN
Trigger: GTTTCCATCTGGCCTTTCCTTAATTAAAGTGTTCCCTAGTTTCCAGGAGGTAAAAGGGTTACAGTGGGAAGGGGGAGACTCTAGTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR CCA 90 bp GTAGGATGGACCAGGCATGTTTTCCCTCTGGAGTCCATCCGGCTCTaGCAATATATTCAACTCCCTCAAACAGAATCTCGAAAGGTTGAA +
Preference number: 1 (lower is better)
Translates to: VGWTRHVFPLESIRL*QYIQLPQTESRKVE
Trigger: TTCAACCTTTCGAGATTCTGTTTGAGGGAGTTGAATATATTGCCAGAGCCGGATGGACTCCAGAGGGAAAACATGCCTGGTCCATCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 90 bp GGCCCAAAATTCCTTTGTTTTATGAACTGGGTCATCCTCAGGACTTaGGAGTTTGTAGAGGGACACACAGTGTGGATTCTTCTGGTTGCT +
Preference number: 1 (lower is better)
Translates to: GPKFLCFMNWVILRT*EFVEGHTVWILLVA
Trigger: AGCAACCAGAAGAATCCACACTGTGTGTCCCTCTACAAACTCTCAAGTCCTGAGGATGACCCAGTTCATAAAACAAAGGAATTTTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR GCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATaGGTCAGAGTTATATCACTTTCAGAGCAGCGATACGCGATCCAA +
Preference number: 1 (lower is better)
Translates to: ANPLCLVRQCTPSST*VRVISLSEQRYAIQ
Trigger: TTGGATCGCGTATCGCTGCTCTGAAAGTGATATAACTCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 90 bp TGTTGTTTCTTCATAGATGATCAGTGGTGTCACAGAGTCAGGAACTaGCTCTATAAGTCTCTGTCTGTCCATGGCATCATCTTCTACTGG +
Preference number: 1 (lower is better)
Translates to: CCFFIDDQWCHRVRN*LYKSLSVHGIIFYW
Trigger: CCAGTAGAAGATGATGCCATGGACAGACAGAGACTTATAGAGTCAGTTCCTGACTCTGTGACACCACTGATCATCTATGAAGAAACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR GCA 90 bp AAGTACACCAGCTTTCTGGCTTCATCAACCCAGATATTAGATCCATaGCGGCCAAGTACTTCCCATTCACCACTGGTAATTGTTATTTCT +
Preference number: 1 (lower is better)
Translates to: KYTSFLASSTQILDP*RPSTSHSPLVIVIS
Trigger: AGAAATAACAATTACCAGTGGTGAATGGGAAGTACTTGGCCGGCATGGATCTAATATCTGGGTTGATGAAGCCAGAAAGCTGGTGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 90 bp GAGACCAGCCAGGTAAGTATCTTTAGGAGGCCACTAGGTTATCCTTaGAAAATTATTAATGACTGGGAAAGTCATAAGCTTAATAGTATT +
Preference number: 1 (lower is better)
Translates to: ETSQVSIFRRPLGYP*KIINDWESHKLNSI
Trigger: AATACTATTAAGCTTATGACTTTCCCAGTCATTAATAATTTTTCAAGGATAACCTAGTGGCCTCCTAAAGATACTTACCTGGCTGGTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000217434.2
3UTR TCA 90 bp TATATGAATAACACAGTGGGGTATTTCTTTCCAGGTTGTAGGTCATaGGGCTTATACAACATTCCATACAGTGTAAATCCAGTAGTACTT +
Preference number: 1 (lower is better)
Translates to: YMNNTVGYFFPGCRS*GLYNIPYSVNPVVL
Trigger: AAGTACTACTGGATTTACACTGTATGGAATGTTGTATAAGCCTCATGACCTACAACCTGGAAAGAAATACCCCACTGTGTTATTCATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 90 bp TCACTCAGTTTTATGTGCATGGTTAAGGTATTAGAGTACTATCCATaGACTGCAGATTTCTGCATGGCACCAAATTTACTTTCAGAAATA +
Preference number: 1 (lower is better)
Translates to: SLSFMCMVKVLEYYP*TADFCMAPNLLSEI
Trigger: TATTTCTGAAAGTAAATTTGGTGCCATGCAGAAATCTGCAGTTCATGGATAGTACTCTAATACCTTAACCATGCACATAAAACTGAGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000217434.2
3UTR-3UTR TCA 90 bp ATCCACAGGGTGACTGGGGCCCCAGCAATAGCCACCCGGAAGATATCCGACCTCCTGGTCACGTACAGGTaGTGCTCCAAAGGAGAGTCT +
Preference number: 2 (lower is better)
Translates to: IHRVTGAPAIATRKISDLLVTYR*CSKGES
Trigger: AGACTCTCCTTTGGAGCATCACCTGTACGTGACCAG...GAGGTCGGATATCTTCCGGGTGGCTATTGCTGGGGCCCCAGTCACCCTGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR TCA 90 bp ATCCACAGGGTGACTGGGGCCCCAGCAATAGCCACCCGGAAGATATCCGACCTCGGGGACCACCATATATaGATAACACAGTGGGGTATT +
Preference number: 2 (lower is better)
Translates to: IHRVTGAPAIATRKISDLGDHHI*ITQWGI
Trigger: AATACCCCACTGTGTTATTCATATATGGTGGTCCCC...GAGGTCGGATATCTTCCGGGTGGCTATTGCTGGGGCCCCAGTCACCCTGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CCA 90 bp TCCAAGGTTCTCCTGAAGGTAGTGGAGCAGGTGCAGTTCATAGTGTTCTCCAGAGATCCACAGGGTGACTaGGGCCCCAGCAATAGCCAC +
Preference number: 2 (lower is better)
Translates to: SKVLLKVVEQVQFIVFSRDPQGD*GPSNSH
Trigger: GTGGCTATTGCTGGGGCCCCAGTCACCCTGTGGATC...TCTGGAGAACACTATGAACTGCACCTGCTCCACTACCTTCAGGAGAACCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR TCA 90 bp GTTCTCCTGAAGGTAGTGGAGCAGGTGCAGTTCATAGTGTTCTCCAGACTCAGGGTGGCGCTGGTGCCTTaGTTCCTTCAGTATCCTCAG +
Preference number: 2 (lower is better)
Translates to: VLLKVVEQVQFIVFSRLRVALVP*FLQYPQ
Trigger: CTGAGGATACTGAAGGAATCAAGGCACCAGCGCCAC...CCTGAGTCTGGAGAACACTATGAACTGCACCTGCTCCACTACCTTCAGGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR TCA 90 bp CATGCGTCAGAGTTATATCACTTTCAGAGCAGCGATACGCGATCCAAGGTTCTCGAGGCAGCAGGAGTGTaGGTAGCCACGGTCAGTCAG +
Preference number: 2 (lower is better)
Translates to: HASELYHFQSSDTRSKVLEAAGV*VATVSQ
Trigger: CTGACTGACCGTGGCTACTCACACTCCTGCTGCCTC...GAGAACCTTGGATCGCGTATCGCTGCTCTGAAAGTGATATAACTCTGACGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR CAA 90 bp AGTGTGAGTAGCCACGGTCAGTCAGCCTCACCACTTCTCCAGGGTTaGCATAACTGGTCACGTACAGGTGATGCTCCAAAGGAGAGTCTT +
Preference number: 2 (lower is better)
Translates to: SVSSHGQSASPLLQG*HNWSRTGDAPKESL
Trigger: AAGACTCTCCTTTGGAGCATCACCTGTACGTGACCAGTTATGCAAACCCTGGAGAAGTGGTGAGGCTGACTGACCGTGGCTACTCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CCA 90 bp GTCCTCGGTGACAGGATCCCCTGTTGTCTATCACCACAACCACATAACCCAGGGCCAAAGGAGAGTCTTTaGTGCCTTCAAAGTACACCA +
Preference number: 2 (lower is better)
Translates to: VLGDRIPCCLSPQPHNPGPKESL*CLQSTP
Trigger: TGGTGTACTTTGAAGGCACCAAAGACTCTCCTTTGG...CCCTGGGTTATGTGGTTGTGGTGATAGACAACAGGGGATCCTGTCACCGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CCA 90 bp GTCCTCGGTGACAGGATCCCCTGTTGTCTATCACCACAACCACATAACCCAGGGTTCATAGATGATCAGTaGTGTCACAGAGTCAGGAAC +
Preference number: 2 (lower is better)
Translates to: VLGDRIPCCLSPQPHNPGFIDDQ*CHRVRN
Trigger: GTTCCTGACTCTGTGACACCACTGATCATCTATGAA...CCCTGGGTTATGTGGTTGTGGTGATAGACAACAGGGGATCCTGTCACCGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CCA 90 bp CAGTTCATAGTGTTCTCCAGACTCAGGAACTCTGATGCTGTGCCTCTCCTGAGGACTTCTCCGCTTGCATaGCCACAGATCCTAAGTAGT +
Preference number: 2 (lower is better)
Translates to: QFIVFSRLRNSDAVPLLRTSPLA*PQILSS
Trigger: ACTACTTAGGATCTGTGGCCATGCAAGCGGAGAAGT...CCTCAGGAGAGGCACAGCATCAGAGTTCCTGAGTCTGGAGAACACTATGAACTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR TCA 90 bp CCAAAGCATCCACCTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGATGGATACACCCCAAGTaGCGAAGCATAAGCTATTCA +
Preference number: 2 (lower is better)
Translates to: PKHPPLFWQSLSSLCSLGWIHPK*RSISYS
Trigger: TGAATAGCTTATGCTTCGTCACTTGGGGTGTATCCA...TCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAGGTGGATGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR-3UTR TCA 90 bp GTCCTCGGTGACAGGATCCCCTGTTGTCTATCACCACAACCACATAACCCAGGGTTGTTTCTTCATAGATaGTCAGTGGTGTCACAGAGT +
Preference number: 2 (lower is better)
Translates to: VLGDRIPCCLSPQPHNPGLFLHR*SVVSQS
Trigger: ACTCTGTGACACCACTGATCATCTATGAAGAAACAA...CCCTGGGTTATGTGGTTGTGGTGATAGACAACAGGGGATCCTGTCACCGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR TCA 90 bp TCCAAGGTTCTCCTGAAGGTAGTGGAGCAGGTGCAGTTCATAGTGTTCTCCAGAAATTTAAGTCCTCGGTaGCAGGATCCCCTGTTGTCT +
Preference number: 2 (lower is better)
Translates to: SKVLLKVVEQVQFIVFSRNLSPR*QDPLLS
Trigger: AGACAACAGGGGATCCTGTCACCGAGGACTTAAATT...TCTGGAGAACACTATGAACTGCACCTGCTCCACTACCTTCAGGAGAACCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR GCA 90 bp CAGTTCATAGTGTTCTCCAGACTCAGGAACTCTGATGCTGTGCCTCTCCTGAGGAAGATATCCGACCTCTaGATTAATGCCATCAGGGAG +
Preference number: 2 (lower is better)
Translates to: QFIVFSRLRNSDAVPLLRKISDL*INAIRE
Trigger: CTCCCTGATGGCATTAATGCAGAGGTCGGATATCTT...CCTCAGGAGAGGCACAGCATCAGAGTTCCTGAGTCTGGAGAACACTATGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CCA 90 bp GTCCTCGGTGACAGGATCCCCTGTTGTCTATCACCACAACCACATAACCCAGGGCTAACCCTCTTTGTTTaGTTAGACAGTGTACACCAA +
Preference number: 2 (lower is better)
Translates to: VLGDRIPCCLSPQPHNPGLTLFV*LDSVHQ
Trigger: TTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAG...CCCTGGGTTATGTGGTTGTGGTGATAGACAACAGGGGATCCTGTCACCGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CCA 90 bp TCCAAGGTTCTCCTGAAGGTAGTGGAGCAGGTGCAGTTCATAGTGTTCTCCAGAGAGTCCATCCGGCTCTaGCAATATATTCAACTCCCT +
Preference number: 2 (lower is better)
Translates to: SKVLLKVVEQVQFIVFSRESIRL*QYIQLP
Trigger: AGGGAGTTGAATATATTGCCAGAGCCGGATGGACTC...TCTGGAGAACACTATGAACTGCACCTGCTCCACTACCTTCAGGAGAACCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR TCA 90 bp TCCAAGGTTCTCCTGAAGGTAGTGGAGCAGGTGCAGTTCATAGTGTTCTCCAGATGGATACACCCCAAGTaGCGAAGCATAAGCTATTCA +
Preference number: 2 (lower is better)
Translates to: SKVLLKVVEQVQFIVFSRWIHPK*RSISYS
Trigger: TGAATAGCTTATGCTTCGTCACTTGGGGTGTATCCA...TCTGGAGAACACTATGAACTGCACCTGCTCCACTACCTTCAGGAGAACCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CCA 90 bp CATGCGTCAGAGTTATATCACTTTCAGAGCAGCGATACGCGATCCAAGGTTCTCGAGGGACACACAGTGTaGATTCTTCTGGTTGCTGTA +
Preference number: 2 (lower is better)
Translates to: HASELYHFQSSDTRSKVLEGHTV*ILLVAV
Trigger: TACAGCAACCAGAAGAATCCACACTGTGTGTCCCTC...GAGAACCTTGGATCGCGTATCGCTGCTCTGAAAGTGATATAACTCTGACGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR TCA 90 bp CTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGAAAGGGACCTGATGATAGTATTTAGTTCATaGCATGCTGGATACACCCCA +
Preference number: 2 (lower is better)
Translates to: LYSGSPCLHCALLERDLMIVFSS*HAGYTP
Trigger: TGGGGTGTATCCAGCATGTCATGAACTAAATACTAT...CATCAGGTCCCTTTCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR-3UTR TCA 90 bp AACTGGTCAGAGACCAGCCAGGTAAGTATCTTTAGGAGGCCACTAGGTTATCCTCATGAGTATTTATGGTaGAGCAGAGCCTTGCTACCT +
Preference number: 2 (lower is better)
Translates to: NWSETSQVSIFRRPLGYPHEYLW*SRALLP
Trigger: AGGTAGCAAGGCTCTGCTTCACCATAAATACTCATG...AGGATAACCTAGTGGCCTCCTAAAGATACTTACCTGGCTGGTCTCTGACCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR-3UTR TCA 90 bp CACTTGAAATCACTTGGGGCAGGTAGTCCACCACTGGACCGTTTATATTTGCTCCACAGAGTCAGGAACTaGCTCTATAAGTCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: HLKSLGAGSPPLDRLYLLHRVRN*LYKSLS
Trigger: AGACAGAGACTTATAGAGTCAGTTCCTGACTCTGTG...GAGCAAATATAAACGGTCCAGTGGTGGACTACCTGCCCCAAGTGATTTCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CCA 90 bp CTAGAGTCTCCCCCTTCCCACTGTAACCCTTTTACCTCCTGGAAACTAGGGAACCTGCAGATTTCTGCATaGCACCAAATTTACTTTCAG +
Preference number: 2 (lower is better)
Translates to: LESPPSHCNPFTSWKLGNLQISA*HQIYFQ
Trigger: CTGAAAGTAAATTTGGTGCCATGCAGAAATCTGCAG...GTTCCCTAGTTTCCAGGAGGTAAAAGGGTTACAGTGGGAAGGGGGAGACTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR-3UTR TCA 90 bp ACTGAGATGCTAGGTACTGGAGTCCTTCCACTTGATCATCGATTTCTATTTGACAGAACTATCTGCAGGTaGGTCTGGGAACGGTCTAGT +
Preference number: 2 (lower is better)
Translates to: TEMLGTGVLPLDHRFLFDRTICR*VWERSS
Trigger: ACTAGACCGTTCCCAGACTCACCTGCAGATAGTTCT...GTCAAATAGAAATCGATGATCAAGTGGAAGGACTCCAGTACCTAGCATCTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR GCA 90 bp GTACACCAAGTTCTACATGCGTCAGAGTTATATCACTTTCAGAGCAGCGATACGCACTTCTCCAGGGTTTaGATAACTGGTCACGTACAG +
Preference number: 2 (lower is better)
Translates to: VHQVLHASELYHFQSSDTHFSRV*ITGHVQ
Trigger: CTGTACGTGACCAGTTATGCAAACCCTGGAGAAGTG...CGTATCGCTGCTCTGAAAGTGATATAACTCTGACGCATGTAGAACTTGGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR GCA 90 bp ATGCTAGGTACTGGAGTCCTTCCACTTGATCATCGATTTCTATTTGACCCATTTCGATTGTTCACCAGCTaGACCTGGGGACCACCATAT +
Preference number: 2 (lower is better)
Translates to: MLGTGVLPLDHRFLFDPFRLFTS*TWGPPY
Trigger: ATATGGTGGTCCCCAGGTGCAGCTGGTGAACAATCG...AAATGGGTCAAATAGAAATCGATGATCAAGTGGAAGGACTCCAGTACCTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR GCA 90 bp TTAGTTCATGACATGCTGGATACACCCCAAGTGACGAAGCATAAGCTATTCAATGGGAACTTCTCCGCTTaGATGGCCACAGATCCTAAG +
Preference number: 2 (lower is better)
Translates to: LVHDMLDTPQVTKHKLFNGNFSA*MATDPK
Trigger: CTTAGGATCTGTGGCCATGCAAGCGGAGAAGTTCCC...ATTGAATAGCTTATGCTTCGTCACTTGGGGTGTATCCAGCATGTCATGAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR CAA 90 bp AACACAACTAACTTGATAGGCTTCCAACACAAAGAGTGCCATGGTTaGTCAGGGATCAGCTTACCGCAAGAAGTGGTCTGGAAACCTTTT +
Preference number: 2 (lower is better)
Translates to: NTTNLIGFQHKECHG*SGISLPQEVVWKPF
Trigger: AAAAGGTTTCCAGACCACTTCTTGCGGTAAGCTGATCCCTGACAAACCATGGCACTCTTTGTGTTGGAAGCCTATCAAGTTAGTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR-3UTR TCA 90 bp TCATCAACCCAGATATTAGATCCATGCCGGCCAAGTACTTCCCATTCACCACTGTTAGAGTACTATCCATaGACTGCAGATTTCTGCATG +
Preference number: 2 (lower is better)
Translates to: SSTQILDPCRPSTSHSPLLEYYP*TADFCM
Trigger: CATGCAGAAATCTGCAGTTCATGGATAGTACTCTAA...CAGTGGTGAATGGGAAGTACTTGGCCGGCATGGATCTAATATCTGGGTTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CCA 90 bp TCCAAGGTTCTCCTGAAGGTAGTGGAGCAGGTGCAGTTCATAGTGTTCTCCAGACTGAATCCAAAATGGTaGCCCAAAATTCCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: SKVLLKVVEQVQFIVFSRLNPKW*PKIPLF
Trigger: AAACAAAGGAATTTTGGGCCACCATTTTGGATTCAG...TCTGGAGAACACTATGAACTGCACCTGCTCCACTACCTTCAGGAGAACCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR TCA 90 bp CAAGTTCTACATGCGTCAGAGTTATATCACTTTCAGAGCAGCGATACGCGATCCAATTCCTTTGTTTTATaGACTGGGTCATCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: QVLHASELYHFQSSDTRSNSFVL*TGSSSG
Trigger: TCCTGAGGATGACCCAGTTCATAAAACAAAGGAATT...GGATCGCGTATCGCTGCTCTGAAAGTGATATAACTCTGACGCATGTAGAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR GCA 90 bp ACTGAGATGCTAGGTACTGGAGTCCTTCCACTTGATCATCGATTTCTATTTGACAAGGAGAGTCTTTGGTaGCTTCAAAGTACACCAGCT +
Preference number: 2 (lower is better)
Translates to: TEMLGTGVLPLDHRFLFDKESLW*LQSTPA
Trigger: AGCTGGTGTACTTTGAAGGCACCAAAGACTCTCCTT...GTCAAATAGAAATCGATGATCAAGTGGAAGGACTCCAGTACCTAGCATCTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CCA 90 bp ACTGAGATGCTAGGTACTGGAGTCCTTCCACTTGATCATCGATTTCTATTTGACCAGGTAGTCCACCACTaGACCGTTTATATTTGCTCT +
Preference number: 2 (lower is better)
Translates to: TEMLGTGVLPLDHRFLFDQVVHH*TVYICS
Trigger: AGAGCAAATATAAACGGTCCAGTGGTGGACTACCTG...GTCAAATAGAAATCGATGATCAAGTGGAAGGACTCCAGTACCTAGCATCTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CCA 90 bp ATATTTAAAGGCGCCTTCAAATTTAAGTCCTCGGTGACAGGATCCCCTGTTGTCCTGCTGAATCCAAAATaGTGGCCCAAAATTCCTTTG +
Preference number: 2 (lower is better)
Translates to: IFKGAFKFKSSVTGSPVVLLNPK*WPKIPL
Trigger: CAAAGGAATTTTGGGCCACCATTTTGGATTCAGCAG...GACAACAGGGGATCCTGTCACCGAGGACTTAAATTTGAAGGCGCCTTTAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CCA 90 bp ATATTTAAAGGCGCCTTCAAATTTAAGTCCTCGGTGACAGGATCCCCTGTTGTCCTGCAGATTTCTGCATaGCACCAAATTTACTTTCAG +
Preference number: 2 (lower is better)
Translates to: IFKGAFKFKSSVTGSPVVLQISA*HQIYFQ
Trigger: CTGAAAGTAAATTTGGTGCCATGCAGAAATCTGCAG...GACAACAGGGGATCCTGTCACCGAGGACTTAAATTTGAAGGCGCCTTTAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CCA 90 bp TTAGTTCATGACATGCTGGATACACCCCAAGTGACGAAGCATAAGCTATTCAATCCGCAAGAAGTGGTCTaGAAACCTTTTTCTTTTAAG +
Preference number: 2 (lower is better)
Translates to: LVHDMLDTPQVTKHKLFNPQEVV*KPFSFK
Trigger: CTTAAAAGAAAAAGGTTTCCAGACCACTTCTTGCGG...ATTGAATAGCTTATGCTTCGTCACTTGGGGTGTATCCAGCATGTCATGAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR TCA 72 bp CTCCAAAGACTGACTGACCCTGTAGCTGTCAAAGCTTaGCCTCCTAGCTCTGGTTTCCAGCCACTCGGGGGT +
Preference number: 3 (lower is better)
Translates to: LQRLTDPVAVKA*PPSSGFQPLGG
Trigger: ACCCCCGAGTGGCTGGAAACCAGAGCTAGGAGGTCAAGCTTTGACAGCTACAGGGTCAGTCAGTCTTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR GCA 72 bp GCCACGGTCAGTCAGCCTCACCACTTCTCCAGGGTTTaGATAACTGGTCACGTACAGGTGATGCTCCAAAGG +
Preference number: 3 (lower is better)
Translates to: ATVSQPHHFSRV*ITGHVQVMLQR
Trigger: CCTTTGGAGCATCACCTGTACGTGACCAGTTATGCAAACCCTGGAGAAGTGGTGAGGCTGACTGACCGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR CCA 72 bp CTATCTGCAGGTGAGTCTGGGAACGGTCTAGTAGGATaGACCAGGCATGTTTTCCCTCTGGAGTCCATCCGG +
Preference number: 3 (lower is better)
Translates to: LSAGESGNGLVG*TRHVFPLESIR
Trigger: CCGGATGGACTCCAGAGGGAAAACATGCCTGGTCCATCCTACTAGACCGTTCCCAGACTCACCTGCAGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR CCA 72 bp CGTGTATCCTGTATCATAGAAGATCCACAGGGTGACTaGGGCCCCAGCAATAGCCACCCGGAAGATATCCGA +
Preference number: 3 (lower is better)
Translates to: RVSCIIEDPQGD*GPSNSHPEDIR
Trigger: TCGGATATCTTCCGGGTGGCTATTGCTGGGGCCCCAGTCACCCTGTGGATCTTCTATGATACAGGATACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR GCA 72 bp CATCCACCTCTATTCTGGCAGTCCCTGTCTTCACTGTaGTCTCTTGGAAAGGGACCTGATGTGGCAGTGAGA +
Preference number: 3 (lower is better)
Translates to: HPPLFWQSLSSL*SLGKGPDVAVR
Trigger: TCTCACTGCCACATCAGGTCCCTTTCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAGGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR-3UTR CAA 90 bp GTCCTCGGTGACAGGATCCCCTGTTGTCTATCACCACAACCACATAACCCAGGGTCTTTGATAGGACACTaGAAATCACTTGGGGCAGGT +
Preference number: 3 (lower is better)
Translates to: VLGDRIPCCLSPQPHNPGSLIGH*KSLGAG
Trigger: ACCTGCCCCAAGTGATTTCAAGTGTCCTATCAAAGA...CCCTGGGTTATGTGGTTGTGGTGATAGACAACAGGGGATCCTGTCACCGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 72 bp AGGACCAGCCGTGGATGCCCACTCGATCCAAGTCAATaGAGTCATACTGAGATGCTAGGTACTGGAGTCCTT +
Preference number: 3 (lower is better)
Translates to: RTSRGCPLDPSQ*SHTEMLGTGVL
Trigger: AAGGACTCCAGTACCTAGCATCTCAGTATGACTTCATTGACTTGGATCGAGTGGGCATCCACGGCTGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR GCA 72 bp ATTAATGAGGGTCAAACCCACAGGTGTCTGGCTAGCTaGAGTGGGACCCATCTAATACTGGAAGGGCAGATG +
Preference number: 3 (lower is better)
Translates to: INEGQTHRCLAS*SGTHLILEGQM
Trigger: CATCTGCCCTTCCAGTATTAGATGGGTCCCACTGCAGCTAGCCAGACACCTGTGGGTTTGACCCTCATTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR CCA 72 bp ACCGGTTTGGTTCTGAGGGGAACTTCTCCGCTTGCATaGCCACAGATCCTAAGTAGTAGCCCTGTTCATTCT +
Preference number: 3 (lower is better)
Translates to: TGLVLRGTSPLA*PQILSSSPVHS
Trigger: AGAATGAACAGGGCTACTACTTAGGATCTGTGGCCATGCAAGCGGAGAAGTTCCCCTCAGAACCAAACCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 72 bp ATGAATAACTCAGGGGAGATCAGAACTATCTGCAGGTaGGTCTGGGAACGGTCTAGTAGGATGGACCAGGCA +
Preference number: 3 (lower is better)
Translates to: MNNSGEIRTICR*VWERSSRMDQA
Trigger: TGCCTGGTCCATCCTACTAGACCGTTCCCAGACTCACCTGCAGATAGTTCTGATCTCCCCTGAGTTATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CAA 90 bp AACTGGTCAGAGACCAGCCAGGTAAGTATCTTTAGGAGGCCACTAGGTTATCCTAAAGAGTGCCATGGTTaGTCAGGGATCAGCTTACCG +
Preference number: 3 (lower is better)
Translates to: NWSETSQVSIFRRPLGYPKECHG*SGISLP
Trigger: CGGTAAGCTGATCCCTGACAAACCATGGCACTCTTT...AGGATAACCTAGTGGCCTCCTAAAGATACTTACCTGGCTGGTCTCTGACCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR TCA 72 bp GGTGCAGTTCATAGTGTTCTCCAGACTCAGGAACTCTaGTGCTGTGCCTCTCCTGAGGATAGATCTGTAAGT +
Preference number: 3 (lower is better)
Translates to: GAVHSVLQTQEL*CCASPEDRSVS
Trigger: ACTTACAGATCTATCCTCAGGAGAGGCACAGCATCAGAGTTCCTGAGTCTGGAGAACACTATGAACTGCACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CAA 90 bp TCCAAGGTTCTCCTGAAGGTAGTGGAGCAGGTGCAGTTCATAGTGTTCTCCAGAGTACTGTTCAATCCTTaGGGAACATGTCACTCAGTT +
Preference number: 3 (lower is better)
Translates to: SKVLLKVVEQVQFIVFSRVLFNP*GTCHSV
Trigger: AACTGAGTGACATGTTCCCAAAGGATTGAACAGTAC...TCTGGAGAACACTATGAACTGCACCTGCTCCACTACCTTCAGGAGAACCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 72 bp GTCTCTGTCTGTCCATGGCATCATCTTCTACTGGGATaGATAACTCAGGGGAGATCAGAACTATCTGCAGGT +
Preference number: 3 (lower is better)
Translates to: VSVCPWHHLLLG*ITQGRSELSAG
Trigger: ACCTGCAGATAGTTCTGATCTCCCCTGAGTTATTCATCCCAGTAGAAGATGATGCCATGGACAGACAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR CCA 72 bp GAGTCTCCCCCTTCCCACTGTAACCCTTTTACCTCCTaGAAACTAGGGAACACTTTAATTAAGGAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: ESPPSHCNPFTS*KLGNTLIKERP
Trigger: TGGCCTTTCCTTAATTAAAGTGTTCCCTAGTTTCCAGGAGGTAAAAGGGTTACAGTGGGAAGGGGGAGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR-3UTR CAA 90 bp TTAGTTCATGACATGCTGGATACACCCCAAGTGACGAAGCATAAGCTATTCAATGATGCCAGCCAGCACTaGAAAGCTCATGCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: LVHDMLDTPQVTKHKLFNDASQH*KAHASL
Trigger: AAGGGAAGCATGAGCTTTCAAGTGCTGGCTGGCATC...ATTGAATAGCTTATGCTTCGTCACTTGGGGTGTATCCAGCATGTCATGAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR TCA 72 bp GATTGTTCACCAGCTGCACCTGGGGACCACCATATATaGATAACACAGTGGGGTATTTCTTTCCAGGTTGTA +
Preference number: 3 (lower is better)
Translates to: DCSPAAPGDHHI*ITQWGISFQVV
Trigger: TACAACCTGGAAAGAAATACCCCACTGTGTTATTCATATATGGTGGTCCCCAGGTGCAGCTGGTGAACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR GCA 72 bp AGCTTTCTGGCTTCATCAACCCAGATATTAGATCCATaGCGGCCAAGTACTTCCCATTCACCACTGGTAATT +
Preference number: 3 (lower is better)
Translates to: SFLASSTQILDP*RPSTSHSPLVI
Trigger: AATTACCAGTGGTGAATGGGAAGTACTTGGCCGGCATGGATCTAATATCTGGGTTGATGAAGCCAGAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 72 bp TTCATAGATGATCAGTGGTGTCACAGAGTCAGGAACTaGCTCTATAAGTCTCTGTCTGTCCATGGCATCATC +
Preference number: 3 (lower is better)
Translates to: FIDDQWCHRVRN*LYKSLSVHGII
Trigger: GATGATGCCATGGACAGACAGAGACTTATAGAGTCAGTTCCTGACTCTGTGACACCACTGATCATCTATGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CAA 90 bp GTACACCAAGTTCTACATGCGTCAGAGTTATATCACTTTCAGAGCAGCGATACGTTCAGGCGGAAATACTaGACTCCTTTAAACCGATTG +
Preference number: 3 (lower is better)
Translates to: VHQVLHASELYHFQSSDTFRRKY*TPLNRL
Trigger: CAATCGGTTTAAAGGAGTCAAGTATTTCCGCCTGAA...CGTATCGCTGCTCTGAAAGTGATATAACTCTGACGCATGTAGAACTTGGTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 72 bp TTTTTAAGTTGTGGTAACTGTCTAAACACTGGGGTGTaGTTAATGAGGGTCAAACCCACAGGTGTCTGGCTA +
Preference number: 3 (lower is better)
Translates to: FLSCGNCLNTGV*LMRVKPTGVWL
Trigger: TAGCCAGACACCTGTGGGTTTGACCCTCATTAATCACACCCCAGTGTTTAGACAGTTACCACAACTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR TCA 72 bp TTCCTTTGTTTTATGAACTGGGTCATCCTCAGGACTTaGGAGTTTGTAGAGGGACACACAGTGTGGATTCTT +
Preference number: 3 (lower is better)
Translates to: FLCFMNWVILRT*EFVEGHTVWIL
Trigger: AAGAATCCACACTGTGTGTCCCTCTACAAACTCTCAAGTCCTGAGGATGACCCAGTTCATAAAACAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 72 bp TTATATTTAAAGGCGCCTTCAAATTTAAGTCCTCGGTaGCAGGATCCCCTGTTGTCTATCACCACAACCACA +
Preference number: 3 (lower is better)
Translates to: LYLKAPSNLSPR*QDPLLSITTTT
Trigger: TGTGGTTGTGGTGATAGACAACAGGGGATCCTGTCACCGAGGACTTAAATTTGAAGGCGCCTTTAAATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR-3UTR CAA 90 bp TCCCACTGTAACCCTTTTACCTCCTGGAAACTAGGGAACACTTTAATTAAGGAATCAGAGATCCTGGAATaGAACCAAACCAATCACTAC +
Preference number: 3 (lower is better)
Translates to: SHCNPFTSWKLGNTLIKESEILE*NQTNHY
Trigger: GTAGTGATTGGTTTGGTTCAATTCCAGGATCTCTGA...TTCCTTAATTAAAGTGTTCCCTAGTTTCCAGGAGGTAAAAGGGTTACAGTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR-3UTR CAA 90 bp ACTGAGATGCTAGGTACTGGAGTCCTTCCACTTGATCATCGATTTCTATTTGACTGTGGATTCTTCTGGTaGCTGTACTTACTTATGAAG +
Preference number: 3 (lower is better)
Translates to: TEMLGTGVLPLDHRFLFDCGFFW*LYLLMK
Trigger: CTTCATAAGTAAGTACAGCAACCAGAAGAATCCACA...GTCAAATAGAAATCGATGATCAAGTGGAAGGACTCCAGTACCTAGCATCTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 72 bp GGATATTTATCCAGATGTCTGTTGTTTCTTCATAGATaGTCAGTGGTGTCACAGAGTCAGGAACTGACTCTA +
Preference number: 3 (lower is better)
Translates to: GYLSRCLLFLHR*SVVSQSQELTL
Trigger: TAGAGTCAGTTCCTGACTCTGTGACACCACTGATCATCTATGAAGAAACAACAGACATCTGGATAAATATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 72 bp AACACAGTGGGGTATTTCTTTCCAGGTTGTAGGTCATaGGGCTTATACAACATTCCATACAGTGTAAATCCA +
Preference number: 3 (lower is better)
Translates to: NTVGYFFPGCRS*GLYNIPYSVNP
Trigger: TGGATTTACACTGTATGGAATGTTGTATAAGCCTCATGACCTACAACCTGGAAAGAAATACCCCACTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
3UTR TCA 72 bp GATGGAAACGGCACCATTATATTTTCAGAATACATGTaGATGTGTACATGTTCTGTTCCTAAAAGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: DGNGTIIFSEYM*MCTCSVPKRRK
Trigger: TTTTCTCCTTTTAGGAACAGAACATGTACACATTCACATGTATTCTGAAAATATAATGGTGCCGTTTCCATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR TCA 90 bp ATCCACAGGGTGACTGGGGCCCCAGCAATAGCCACCCGGAAGATATCCGACCTCTGCGCTTTCTTTCTCTaGGTAGCTCTTCCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: IHRVTGAPAIATRKISDLCAFFL*VALPLE
Trigger: CTCGAGAGGAAGAGCTACTCAGAGAAAGAAAGCGCA...GAGGTCGGATATCTTCCGGGTGGCTATTGCTGGGGCCCCAGTCACCCTGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp ATCCACAGGGTGACTGGGGCCCCAGCAATAGCCACCCGGAAGATATCCGACCTCCAACACCAGCTGATCTaGGATCCTCTTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: IHRVTGAPAIATRKISDLQHQLI*DPLPCW
Trigger: CCAACATGGAAGAGGATCCCAGATCAGCTGGTGTTG...GAGGTCGGATATCTTCCGGGTGGCTATTGCTGGGGCCCCAGTCACCCTGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp CTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGAAAGGGACCTGATGAGTCACAATGCCGGCTaGGGCAGCAGGAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: LYSGSPCLHCALLERDLMSHNAG*GSRSVS
Trigger: ACTCACACTCCTGCTGCCTCAGCCGGCATTGTGACT...CATCAGGTCCCTTTCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR CAA 72 bp AGCCACGGTCAGTCAGCCTCACCACTTCTCCAGGGTTaGCATAACTGGTCACGTACAGGTGATGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SHGQSASPLLQG*HNWSRTGDAPK
Trigger: CTTTGGAGCATCACCTGTACGTGACCAGTTATGCAAACCCTGGAGAAGTGGTGAGGCTGACTGACCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR GCA 90 bp CTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGAAAGGGACCTGATGAGGACCAGCCGTGGATaGCCACTCGATCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LYSGSPCLHCALLERDLMRTSRG*PLDPSQ
Trigger: TTGACTTGGATCGAGTGGGCATCCACGGCTGGTCCT...CATCAGGTCCCTTTCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR CAA 72 bp TCTCATCCAAGAACCCATGCAAGAGGAGTAACCGGTTaGGTTCTGAGGGGAACTTCTCCGCTTGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: SHPRTHARGVTG*VLRGTSPLAWP
Trigger: TGGCCATGCAAGCGGAGAAGTTCCCCTCAGAACCAAACCGGTTACTCCTCTTGCATGGGTTCTTGGATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGAGAGGCAGCAGGAGTGTaGGTAGCCACGGTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVREAAGV*VATVSQ
Trigger: CTGACTGACCGTGGCTACTCACACTCCTGCTGCCTC...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp CCACCCGGAAGATATCCGACCTCTGCATTAATGCCATCAGGGAGAGGTAGCCACGATCCTCTTCCATGTTaGCTAGCTCATTGTGTACGT +
Preference number: 4 (lower is better)
Translates to: PPGRYPTSALMPSGRGSHDPLPC*LAHCVR
Trigger: ACGTACACAATGAGCTAGCCAACATGGAAGAGGATC...GTGGCTACCTCTCCCTGATGGCATTAATGCAGAGGTCGGATATCTTCCGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCGATCCACAGGGTGACTaGGGCCCCAGCAATAGCCAC +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVDPQGD*GPSNSH
Trigger: GTGGCTATTGCTGGGGCCCCAGTCACCCTGTGGATC...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGAGGCAGCAGGAGTGTaGGTAGCCACGGTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCEAAGV*VATVSQ
Trigger: CTGACTGACCGTGGCTACTCACACTCCTGCTGCCTC...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAAGTCACAATGCCGGCTaGGGCAGCAGGAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASSHNAG*GSRSVS
Trigger: ACTCACACTCCTGCTGCCTCAGCCGGCATTGTGACT...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR GCA 90 bp CTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGAAAGGGACCTGATGCACTTCTCCAGGGTTTaGATAACTGGTCACGTACAG +
Preference number: 4 (lower is better)
Translates to: LYSGSPCLHCALLERDLMHFSRV*ITGHVQ
Trigger: CTGTACGTGACCAGTTATGCAAACCCTGGAGAAGTG...CATCAGGTCCCTTTCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR GCA 90 bp AAAGCTCATGCTTCCCTTCATAGTCAAGCAGGAAGGCTGAAGCAGGAGAATGCTCGATTGTTCACCAGCTaGACCTGGGGACCACCATAT +
Preference number: 4 (lower is better)
Translates to: KAHASLHSQAGRLKQENARLFTS*TWGPPY
Trigger: ATATGGTGGTCCCCAGGTGCAGCTGGTGAACAATCG...AGCATTCTCCTGCTTCAGCCTTCCTGCTTGACTATGAAGGGAAGCATGAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CCA 90 bp CTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGAAAGGGACCTGATGCTTGAAGAACAAAGGTaGCAACACCAGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LYSGSPCLHCALLERDLMLEEQR*QHQLIW
Trigger: CCAGATCAGCTGGTGTTGCCACCTTTGTTCTTCAAG...CATCAGGTCCCTTTCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CCA 90 bp CTAGAGTCTCCCCCTTCCCACTGTAACCCTTTTACCTCCTGGAAACTAGGGAACGAGTCCATCCGGCTCTaGCAATATATTCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: LESPPSHCNPFTSWKLGNESIRL*QYIQLP
Trigger: AGGGAGTTGAATATATTGCCAGAGCCGGATGGACTC...GTTCCCTAGTTTCCAGGAGGTAAAAGGGTTACAGTGGGAAGGGGGAGACTCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCGGCATGTTTTCCCTCTaGAGTCCATCCGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVGMFSL*SPSGSG
Trigger: GCCAGAGCCGGATGGACTCCAGAGGGAAAACATGCC...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp CCAAAGCATCCACCTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGATTCACCAGCTGCACCTaGGGACCACCATATATGAAT +
Preference number: 4 (lower is better)
Translates to: PKHPPLFWQSLSSLCSLGFTSCT*GPPYMN
Trigger: ATTCATATATGGTGGTCCCCAGGTGCAGCTGGTGAA...TCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAGGTGGATGCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGATCCACAGGGTGACTaGGGCCCCAGCAATAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCDPQGD*GPSNSH
Trigger: GTGGCTATTGCTGGGGCCCCAGTCACCCTGTGGATC...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
3UTR CAA 72 bp CCATCTAATACTGGAAGGGCAGATGCCAGCCAGCACTaGAAAGCTCATGCTTCCCTTCATAGTCAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PSNTGRADASQH*KAHASLHSQAG
Trigger: TCCTGCTTGACTATGAAGGGAAGCATGAGCTTTCAAGTGCTGGCTGGCATCTGCCCTTCCAGTATTAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR TCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGAGGTGGCAACACCAGCTaGTCTGGGATCCTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRGGNTS*SGILFH
Trigger: ATGGAAGAGGATCCCAGATCAGCTGGTGTTGCCACC...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp CTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGAAAGGGACCTGATGTGCTGTACTTACTTATaGAGAAGTCACAATGCCGGC +
Preference number: 4 (lower is better)
Translates to: LYSGSPCLHCALLERDLMCCTYL*RSHNAG
Trigger: GCCGGCATTGTGACTTCTTCATAAGTAAGTACAGCA...CATCAGGTCCCTTTCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR TCA 90 bp AACTGGTCAGAGACCAGCCAGGTAAGTATCTTTAGGAGGCCACTAGGTTATCCTGTCATCCTCAGGACTTaGGAGTTTGTAGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: NWSETSQVSIFRRPLGYPVILRT*EFVEGH
Trigger: GTGTCCCTCTACAAACTCTCAAGTCCTGAGGATGAC...AGGATAACCTAGTGGCCTCCTAAAGATACTTACCTGGCTGGTCTCTGACCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR GCA 90 bp CTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGAAAGGGACCTGATGCTGTTCTGTTTCCATTaGTGCTGCCATGTTGCATCT +
Preference number: 4 (lower is better)
Translates to: LYSGSPCLHCALLERDLMLFCFH*CCHVAS
Trigger: AGATGCAACATGGCAGCAGCAATGGAAACAGAACAG...CATCAGGTCCCTTTCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR GCA 90 bp GTTCTCCTGAAGGTAGTGGAGCAGGTGCAGTTCATAGTGTTCTCCAGACTCAGGTATGGTAAATGCCGCTaGCAGCTTGAAACAGGAATG +
Preference number: 4 (lower is better)
Translates to: VLLKVVEQVQFIVFSRLRYGKCR*QLETGM
Trigger: CATTCCTGTTTCAAGCTGGCAGCGGCATTTACCATA...CCTGAGTCTGGAGAACACTATGAACTGCACCTGCTCCACTACCTTCAGGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR GCA 90 bp CCAAAGCATCCACCTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGACAGATATTAGATCCATaGCGGCCAAGTACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: PKHPPLFWQSLSSLCSLGQILDP*RPSTSH
Trigger: ATGGGAAGTACTTGGCCGGCATGGATCTAATATCTG...TCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAGGTGGATGCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR GCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAAGGACCAGCCGTGGATaGCCACTCGATCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASRTSRG*PLDPSQ
Trigger: TTGACTTGGATCGAGTGGGCATCCACGGCTGGTCCT...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR GCA 90 bp CTAGAGTCTCCCCCTTCCCACTGTAACCCTTTTACCTCCTGGAAACTAGGGAACAAGATATCCGACCTCTaGATTAATGCCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LESPPSHCNPFTSWKLGNKISDL*INAIRE
Trigger: CTCCCTGATGGCATTAATGCAGAGGTCGGATATCTT...GTTCCCTAGTTTCCAGGAGGTAAAAGGGTTACAGTGGGAAGGGGGAGACTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CCA 90 bp AACTGGTCAGAGACCAGCCAGGTAAGTATCTTTAGGAGGCCACTAGGTTATCCTCAACACCAGCTGATCTaGGATCCTCTTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: NWSETSQVSIFRRPLGYPQHQLI*DPLPCW
Trigger: CCAACATGGAAGAGGATCCCAGATCAGCTGGTGTTG...AGGATAACCTAGTGGCCTCCTAAAGATACTTACCTGGCTGGTCTCTGACCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGGCATGTTTTCCCTCTaGAGTCCATCCGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCGMFSL*SPSGSG
Trigger: GCCAGAGCCGGATGGACTCCAGAGGGAAAACATGCC...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp CCAAAGCATCCACCTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGACAGGTAGTCCACCACTaGACCGTTTATATTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PKHPPLFWQSLSSLCSLGQVVHH*TVYICS
Trigger: AGAGCAAATATAAACGGTCCAGTGGTGGACTACCTG...TCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAGGTGGATGCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CCA 90 bp CTAGAGTCTCCCCCTTCCCACTGTAACCCTTTTACCTCCTGGAAACTAGGGAACCCAAAGGAGAGTCTTTaGTGCCTTCAAAGTACACCA +
Preference number: 4 (lower is better)
Translates to: LESPPSHCNPFTSWKLGNPKESL*CLQSTP
Trigger: TGGTGTACTTTGAAGGCACCAAAGACTCTCCTTTGG...GTTCCCTAGTTTCCAGGAGGTAAAAGGGTTACAGTGGGAAGGGGGAGACTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
3UTR CAA 72 bp AACTTGATAGGCTTCCAACACAAAGAGTGCCATGGTTaGTCAGGGATCAGCTTACCGCAAGAAGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: NLIGFQHKECHG*SGISLPQEVVW
Trigger: CCAGACCACTTCTTGCGGTAAGCTGATCCCTGACAAACCATGGCACTCTTTGTGTTGGAAGCCTATCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR TCA 90 bp ACCAGCTTTCTGGCTTCATCAACCCAGATATTAGATCCATGCCGGCCAAGTACTAGCAGCTTTTTCAGCTaGCTCCAAGAATACCGTTCG +
Preference number: 4 (lower is better)
Translates to: TSFLASSTQILDPCRPSTSSFFS*LQEYRS
Trigger: CGAACGGTATTCTTGGAGTCAGCTGAAAAAGCTGCT...AGTACTTGGCCGGCATGGATCTAATATCTGGGTTGATGAAGCCAGAAAGCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGTAATAGACCCTGTCTaGGTGAGGCCCATCTGGATC +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASVIDPV*VRPIWI
Trigger: GATCCAGATGGGCCTCACTCAGACAGGGTCTATTAC...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGGTGGCAACACCAGCTaGTCTGGGATCCTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCGGNTS*SGILFH
Trigger: ATGGAAGAGGATCCCAGATCAGCTGGTGTTGCCACC...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCACTGGTCACGTACAGGTaGTGCTCCAAAGGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASLVTYR*CSKGES
Trigger: AGACTCTCCTTTGGAGCATCACCTGTACGTGACCAG...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp CTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGAAAGGGACCTGATGTCAATGAAGTCATACTaGGATGCTAGGTACTGGAGT +
Preference number: 4 (lower is better)
Translates to: LYSGSPCLHCALLERDLMSMKSY*DARYWS
Trigger: ACTCCAGTACCTAGCATCTCAGTATGACTTCATTGA...CATCAGGTCCCTTTCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR GCA 90 bp CATTCTCATCCAAGAACCCATGCAAGAGGAGTAACCGGTTTGGTTCTGAGGGGACTGTTCTGTTTCCATTaGTGCTGCCATGTTGCATCT +
Preference number: 4 (lower is better)
Translates to: HSHPRTHARGVTGLVLRGLFCFH*CCHVAS
Trigger: AGATGCAACATGGCAGCAGCAATGGAAACAGAACAG...TCCCCTCAGAACCAAACCGGTTACTCCTCTTGCATGGGTTCTTGGATGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR GCA 90 bp GGGGTTACATTTACCCTGGGTTTTCTCATGAGTATTTATGGTGAAGCAGAGCCTGGGAACTTCTCCGCTTaGATGGCCACAGATCCTAAG +
Preference number: 4 (lower is better)
Translates to: GVTFTLGFLMSIYGEAEPGNFSA*MATDPK
Trigger: CTTAGGATCTGTGGCCATGCAAGCGGAGAAGTTCCC...AGGCTCTGCTTCACCATAAATACTCATGAGAAAACCCAGGGTAAATGTAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR GCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGGGAACTTCTCCGCTTaGATGGCCACAGATCCTAAG +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASGNFSA*MATDPK
Trigger: CTTAGGATCTGTGGCCATGCAAGCGGAGAAGTTCCC...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp ACCAGCTTTCTGGCTTCATCAACCCAGATATTAGATCCATGCCGGCCAAGTACTAAAAAGGCTCCAGTTTaGGTCGGTCCTGTGATTCAC +
Preference number: 4 (lower is better)
Translates to: TSFLASSTQILDPCRPSTKKAPV*VGPVIH
Trigger: GTGAATCACAGGACCGACCCAAACTGGAGCCTTTTT...AGTACTTGGCCGGCATGGATCTAATATCTGGGTTGATGAAGCCAGAAAGCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp CTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGAAAGGGACCTGATGTTCATAGATGATCAGTaGTGTCACAGAGTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LYSGSPCLHCALLERDLMFIDDQ*CHRVRN
Trigger: GTTCCTGACTCTGTGACACCACTGATCATCTATGAA...CATCAGGTCCCTTTCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CCA 90 bp AAAGCTCATGCTTCCCTTCATAGTCAAGCAGGAAGGCTGAAGCAGGAGAATGCTGAGGGACACACAGTGTaGATTCTTCTGGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: KAHASLHSQAGRLKQENAEGHTV*ILLVAV
Trigger: TACAGCAACCAGAAGAATCCACACTGTGTGTCCCTC...AGCATTCTCCTGCTTCAGCCTTCCTGCTTGACTATGAAGGGAAGCATGAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CCA 90 bp CTAGAGTCTCCCCCTTCCCACTGTAACCCTTTTACCTCCTGGAAACTAGGGAACCTGCTGAATCCAAAATaGTGGCCCAAAATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LESPPSHCNPFTSWKLGNLLNPK*WPKIPL
Trigger: CAAAGGAATTTTGGGCCACCATTTTGGATTCAGCAG...GTTCCCTAGTTTCCAGGAGGTAAAAGGGTTACAGTGGGAAGGGGGAGACTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR TCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTAATAGACCCTGTCTaGGTGAGGCCCATCTGGATC +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCVIDPV*VRPIWI
Trigger: GATCCAGATGGGCCTCACTCAGACAGGGTCTATTAC...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp GGGGTTACATTTACCCTGGGTTTTCTCATGAGTATTTATGGTGAAGCAGAGCCTTGCGCTTTCTTTCTCTaGGTAGCTCTTCCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: GVTFTLGFLMSIYGEAEPCAFFL*VALPLE
Trigger: CTCGAGAGGAAGAGCTACTCAGAGAAAGAAAGCGCA...AGGCTCTGCTTCACCATAAATACTCATGAGAAAACCCAGGGTAAATGTAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR TCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGATGCGCTTTCTTTCTCTaGGTAGCTCTTCCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRCAFFL*VALPLE
Trigger: CTCGAGAGGAAGAGCTACTCAGAGAAAGAAAGCGCA...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp AACTGGTCAGAGACCAGCCAGGTAAGTATCTTTAGGAGGCCACTAGGTTATCCTATGGGGGACGTAACATaGATAATCTCCACCTCAGAT +
Preference number: 4 (lower is better)
Translates to: NWSETSQVSIFRRPLGYPMGDVT*IISTSD
Trigger: ATCTGAGGTGGAGATTATTCATGTTACGTCCCCCAT...AGGATAACCTAGTGGCCTCCTAAAGATACTTACCTGGCTGGTCTCTGACCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp CCAAAGCATCCACCTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGATTGTTTCTTCATAGATaGTCAGTGGTGTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: PKHPPLFWQSLSSLCSLGLFLHR*SVVSQS
Trigger: ACTCTGTGACACCACTGATCATCTATGAAGAAACAA...TCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAGGTGGATGCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR TCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGTCATCCTCAGGACTTaGGAGTTTGTAGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASVILRT*EFVEGH
Trigger: GTGTCCCTCTACAAACTCTCAAGTCCTGAGGATGAC...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp CCAAAGCATCCACCTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGAAATTCCTTTGTTTTATaGACTGGGTCATCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: PKHPPLFWQSLSSLCSLGNSFVL*TGSSSG
Trigger: TCCTGAGGATGACCCAGTTCATAAAACAAAGGAATT...TCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAGGTGGATGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR GCA 90 bp AACTGGTCAGAGACCAGCCAGGTAAGTATCTTTAGGAGGCCACTAGGTTATCCTAGTGACCTTTGGGTTTaGTGTGCCTGTTTTGGGATA +
Preference number: 4 (lower is better)
Translates to: NWSETSQVSIFRRPLGYPSDLWV*CACFGI
Trigger: TATCCCAAAACAGGCACAGCAAACCCAAAGGTCACT...AGGATAACCTAGTGGCCTCCTAAAGATACTTACCTGGCTGGTCTCTGACCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR GCA 90 bp AAAGCTCATGCTTCCCTTCATAGTCAAGCAGGAAGGCTGAAGCAGGAGAATGCTAAGGAGAGTCTTTGGTaGCTTCAAAGTACACCAGCT +
Preference number: 4 (lower is better)
Translates to: KAHASLHSQAGRLKQENAKESLW*LQSTPA
Trigger: AGCTGGTGTACTTTGAAGGCACCAAAGACTCTCCTT...AGCATTCTCCTGCTTCAGCCTTCCTGCTTGACTATGAAGGGAAGCATGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR GCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCCGATTGTTCACCAGCTaGACCTGGGGACCACCATAT +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCRLFTS*TWGPPY
Trigger: ATATGGTGGTCCCCAGGTGCAGCTGGTGAACAATCG...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGACAACACCAGCTGATCTaGGATCCTCTTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRQHQLI*DPLPCW
Trigger: CCAACATGGAAGAGGATCCCAGATCAGCTGGTGTTG...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGCAGCTTTTTCAGCTaGCTCCAAGAATACCGTTCG +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVSSFFS*LQEYRS
Trigger: CGAACGGTATTCTTGGAGTCAGCTGAAAAAGCTGCT...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp CCAAAGCATCCACCTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGACAAATATCATTGCTGTaGATGAAAGCTATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: PKHPPLFWQSLSSLCSLGQISLL*MKAIQS
Trigger: AGACTGGATAGCTTTCATTCACAGCAATGATATTTG...TCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAGGTGGATGCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR TCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCAGAACTATCTGCAGGTaGGTCTGGGAACGGTCTAGT +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCRTICR*VWERSS
Trigger: ACTAGACCGTTCCCAGACTCACCTGCAGATAGTTCT...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAAATTTAAGTCCTCGGTaGCAGGATCCCCTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASNLSPR*QDPLLS
Trigger: AGACAACAGGGGATCCTGTCACCGAGGACTTAAATT...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAATTTAAGTCCTCGGTaGCAGGATCCCCTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVNLSPR*QDPLLS
Trigger: AGACAACAGGGGATCCTGTCACCGAGGACTTAAATT...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR GCA 90 bp CTAGAGTCTCCCCCTTCCCACTGTAACCCTTTTACCTCCTGGAAACTAGGGAACCAATATACTGGTGTGTaGAAAGTGAACATTCTCATC +
Preference number: 4 (lower is better)
Translates to: LESPPSHCNPFTSWKLGNQYTGV*KVNILI
Trigger: GATGAGAATGTTCACTTTGCACACACCAGTATATTG...GTTCCCTAGTTTCCAGGAGGTAAAAGGGTTACAGTGGGAAGGGGGAGACTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAAAAAAGGCTCCAGTTTaGGTCGGTCCTGTGATTCAC +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASKKAPV*VGPVIH
Trigger: GTGAATCACAGGACCGACCCAAACTGGAGCCTTTTT...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAAAAAGGCTCCAGTTTaGGTCGGTCCTGTGATTCAC +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVKKAPV*VGPVIH
Trigger: GTGAATCACAGGACCGACCCAAACTGGAGCCTTTTT...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp AACTGGTCAGAGACCAGCCAGGTAAGTATCTTTAGGAGGCCACTAGGTTATCCTAGCCGTGGTATTTTCTaGTATCAGCAAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: NWSETSQVSIFRRPLGYPSRGIF*YQQAAF
Trigger: AAAAGCTGCTTGCTGATACCAGAAAATACCACGGCT...AGGATAACCTAGTGGCCTCCTAAAGATACTTACCTGGCTGGTCTCTGACCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGACTTGAAGAACAAAGGTaGCAACACCAGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRLEEQR*QHQLIW
Trigger: CCAGATCAGCTGGTGTTGCCACCTTTGTTCTTCAAG...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCGAGTCCATCCGGCTCTaGCAATATATTCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVESIRL*QYIQLP
Trigger: AGGGAGTTGAATATATTGCCAGAGCCGGATGGACTC...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCGAGGGACACACAGTGTaGATTCTTCTGGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVEGHTV*ILLVAV
Trigger: TACAGCAACCAGAAGAATCCACACTGTGTGTCCCTC...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCACTTCTCCGCTTGCATaGCCACAGATCCTAAGTAGT +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVTSPLA*PQILSS
Trigger: ACTACTTAGGATCTGTGGCCATGCAAGCGGAGAAGT...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCAGCAGCTTTTTCAGCTaGCTCCAAGAATACCGTTCG +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCSSFFS*LQEYRS
Trigger: CGAACGGTATTCTTGGAGTCAGCTGAAAAAGCTGCT...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp ACCAGCTTTCTGGCTTCATCAACCCAGATATTAGATCCATGCCGGCCAAGTACTCCTGGTTACGAGGTTTaGTATCCAAATATCATTGCT +
Preference number: 4 (lower is better)
Translates to: TSFLASSTQILDPCRPSTPGYEV*YPNIIA
Trigger: AGCAATGATATTTGGATATCAAACCTCGTAACCAGG...AGTACTTGGCCGGCATGGATCTAATATCTGGGTTGATGAAGCCAGAAAGCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAATGGGGGACGTAACATaGATAATCTCCACCTCAGAT +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASMGDVT*IISTSD
Trigger: ATCTGAGGTGGAGATTATTCATGTTACGTCCCCCAT...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp TTAGTTCATGACATGCTGGATACACCCCAAGTGACGAAGCATAAGCTATTCAATAGAACTATCTGCAGGTaGGTCTGGGAACGGTCTAGT +
Preference number: 4 (lower is better)
Translates to: LVHDMLDTPQVTKHKLFNRTICR*VWERSS
Trigger: ACTAGACCGTTCCCAGACTCACCTGCAGATAGTTCT...ATTGAATAGCTTATGCTTCGTCACTTGGGGTGTATCCAGCATGTCATGAACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR TCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCCATCTTCTACTGGGATaGATAACTCAGGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVHLLLG*ITQGRS
Trigger: TGATCTCCCCTGAGTTATTCATCCCAGTAGAAGATG...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCACATCTTCTACTGGGATaGATAACTCAGGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASHLLLG*ITQGRS
Trigger: TGATCTCCCCTGAGTTATTCATCCCAGTAGAAGATG...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCACACAGAGTCAGGAACTaGCTCTATAAGTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASHRVRN*LYKSLS
Trigger: AGACAGAGACTTATAGAGTCAGTTCCTGACTCTGTG...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCTGCTGTACTTACTTATaGAGAAGTCACAATGCCGGC +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVCCTYL*RSHNAG
Trigger: GCCGGCATTGTGACTTCTTCATAAGTAAGTACAGCA...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR GCA 90 bp GGGGTTACATTTACCCTGGGTTTTCTCATGAGTATTTATGGTGAAGCAGAGCCTTCCCTCCTCACACTCTaGAGTTTCAAATATCTCGAC +
Preference number: 4 (lower is better)
Translates to: GVTFTLGFLMSIYGEAEPSLLTL*SFKYLD
Trigger: GTCGAGATATTTGAAACTGCAGAGTGTGAGGAGGGA...AGGCTCTGCTTCACCATAAATACTCATGAGAAAACCCAGGGTAAATGTAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR GCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCATATGGTAAATGCCGCTaGCAGCTTGAAACAGGAATG +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASYGKCR*QLETGM
Trigger: CATTCCTGTTTCAAGCTGGCAGCGGCATTTACCATA...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR GCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGATATGGTAAATGCCGCTaGCAGCTTGAAACAGGAATG +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRYGKCR*QLETGM
Trigger: CATTCCTGTTTCAAGCTGGCAGCGGCATTTACCATA...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR GCA 90 bp GGGGTTACATTTACCCTGGGTTTTCTCATGAGTATTTATGGTGAAGCAGAGCCTCCTTTGGGTTTGCTGTaGCTGTTTTGGGATAACGAA +
Preference number: 4 (lower is better)
Translates to: GVTFTLGFLMSIYGEAEPPLGLL*LFWDNE
Trigger: TTCGTTATCCCAAAACAGGCACAGCAAACCCAAAGG...AGGCTCTGCTTCACCATAAATACTCATGAGAAAACCCAGGGTAAATGTAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR GCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCACCTTTGGGTTTGCTGTaGCTGTTTTGGGATAACGAA +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASPLGLL*LFWDNE
Trigger: TTCGTTATCCCAAAACAGGCACAGCAAACCCAAAGG...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR GCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGAAGTGACCTTTGGGTTTaGTGTGCCTGTTTTGGGATA +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRSDLWV*CACFGI
Trigger: TATCCCAAAACAGGCACAGCAAACCCAAAGGTCACT...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR GCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCACAGATATTAGATCCATaGCGGCCAAGTACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASQILDP*RPSTSH
Trigger: ATGGGAAGTACTTGGCCGGCATGGATCTAATATCTG...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR GCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAAAGGAGAGTCTTTGGTaGCTTCAAAGTACACCAGCT +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASKESLW*LQSTPA
Trigger: AGCTGGTGTACTTTGAAGGCACCAAAGACTCTCCTT...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR GCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCCACTTCTCCAGGGTTTaGATAACTGGTCACGTACAG +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCHFSRV*ITGHVQ
Trigger: CTGTACGTGACCAGTTATGCAAACCCTGGAGAAGTG...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR GCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGAAAGATATCCGACCTCTaGATTAATGCCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRKISDL*INAIRE
Trigger: CTCCCTGATGGCATTAATGCAGAGGTCGGATATCTT...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR GCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGATCATCCAAGAACCCATaGAAGAGGAGTAACCGGTTT +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRSSKNP*KRSNRF
Trigger: AAACCGGTTACTCCTCTTGCATGGGTTCTTGGATGA...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp CACTTGAAATCACTTGGGGCAGGTAGTCCACCACTGGACCGTTTATATTTGCTCAAACATAAAGTCATGTaGCGCCTTAGCCATCATGTA +
Preference number: 4 (lower is better)
Translates to: HLKSLGAGSPPLDRLYLLKHKVM*RLSHHV
Trigger: TACATGATGGCTAAGGCGCCACATGACTTTATGTTT...GAGCAAATATAAACGGTCCAGTGGTGGACTACCTGCCCCAAGTGATTTCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGATCCTCTTCCATGTTaGCTAGCTCATTGTGTACGT +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASDPLPC*LAHCVR
Trigger: ACGTACACAATGAGCTAGCCAACATGGAAGAGGATC...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCGATCCTCTTCCATGTTaGCTAGCTCATTGTGTACGT +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVDPLPC*LAHCVR
Trigger: ACGTACACAATGAGCTAGCCAACATGGAAGAGGATC...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCCTTGAAGAACAAAGGTaGCAACACCAGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCLEEQR*QHQLIW
Trigger: CCAGATCAGCTGGTGTTGCCACCTTTGTTCTTCAAG...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCCAGGTAGTCCACCACTaGACCGTTTATATTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVQVVHH*TVYICS
Trigger: AGAGCAAATATAAACGGTCCAGTGGTGGACTACCTG...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCTTCACCAGCTGCACCTaGGGACCACCATATATGAAT +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCFTSCT*GPPYMN
Trigger: ATTCATATATGGTGGTCCCCAGGTGCAGCTGGTGAA...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp CAAGTTCTACATGCGTCAGAGTTATATCACTTTCAGAGCAGCGATACGCGATCCTATCATTGCTGTGAATaGAAGCTATCCAGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: QVLHASELYHFQSSDTRSYHCCE*KLSSLD
Trigger: ATCCAGACTGGATAGCTTTCATTCACAGCAATGATA...GGATCGCGTATCGCTGCTCTGAAAGTGATATAACTCTGACGCATGTAGAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp AACTGGTCAGAGACCAGCCAGGTAAGTATCTTTAGGAGGCCACTAGGTTATCCTCAAATATCATTGCTGTaGATGAAAGCTATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: NWSETSQVSIFRRPLGYPQISLL*MKAIQS
Trigger: AGACTGGATAGCTTTCATTCACAGCAATGATATTTG...AGGATAACCTAGTGGCCTCCTAAAGATACTTACCTGGCTGGTCTCTGACCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp ACTGAGATGCTAGGTACTGGAGTCCTTCCACTTGATCATCGATTTCTATTTGACATGGGGGACGTAACATaGATAATCTCCACCTCAGAT +
Preference number: 4 (lower is better)
Translates to: TEMLGTGVLPLDHRFLFDMGDVT*IISTSD
Trigger: ATCTGAGGTGGAGATTATTCATGTTACGTCCCCCAT...GTCAAATAGAAATCGATGATCAAGTGGAAGGACTCCAGTACCTAGCATCTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCCACAGAGTCAGGAACTaGCTCTATAAGTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCHRVRN*LYKSLS
Trigger: AGACAGAGACTTATAGAGTCAGTTCCTGACTCTGTG...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGGGGACCACCATATATaGATAACACAGTGGGGTATT +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCGDHHI*ITQWGI
Trigger: AATACCCCACTGTGTTATTCATATATGGTGGTCCCC...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGATCAATGAAGTCATACTaGGATGCTAGGTACTGGAGT +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRSMKSY*DARYWS
Trigger: ACTCCAGTACCTAGCATCTCAGTATGACTTCATTGA...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR GCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCCTGTTCTGTTTCCATTaGTGCTGCCATGTTGCATCT +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCLFCFH*CCHVAS
Trigger: AGATGCAACATGGCAGCAGCAATGGAAACAGAACAG...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR GCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCTCCCTCCTCACACTCTaGAGTTTCAAATATCTCGAC +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCSLLTL*SFKYLD
Trigger: GTCGAGATATTTGAAACTGCAGAGTGTGAGGAGGGA...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR GCA 90 bp ATTCTGGTCAGGGTGACCCATATAGCGCTCCGTGTATCCTGTATCATAGAAGATATAACGAAAGGAATCTaGCCTCCTTGTTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: ILVRVTHIALRVSCIIEDITKGI*PPCFQH
Trigger: ATGTTGGAAACAAGGAGGGCAGATTCCTTTCGTTAT...ATCTTCTATGATACAGGATACACGGAGCGCTATATGGGTCACCCTGACCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR GCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCTCATCCAAGAACCCATaGAAGAGGAGTAACCGGTTT +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCSSKNP*KRSNRF
Trigger: AAACCGGTTACTCCTCTTGCATGGGTTCTTGGATGA...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAAGCCGTGGTATTTTCTaGTATCAGCAAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASSRGIF*YQQAAF
Trigger: AAAAGCTGCTTGCTGATACCAGAAAATACCACGGCT...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp AAAGCTCATGCTTCCCTTCATAGTCAAGCAGGAAGGCTGAAGCAGGAGAATGCTTTGTGTAAATCCATGTaGTCCTCCATCTTTGATATG +
Preference number: 4 (lower is better)
Translates to: KAHASLHSQAGRLKQENALCKSM*SSIFDM
Trigger: CATATCAAAGATGGAGGACCACATGGATTTACACAA...AGCATTCTCCTGCTTCAGCCTTCCTGCTTGACTATGAAGGGAAGCATGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CCA 90 bp GGGGTTACATTTACCCTGGGTTTTCTCATGAGTATTTATGGTGAAGCAGAGCCTTTGCTGTGCCTGTTTTaGGATAACGAAAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: GVTFTLGFLMSIYGEAEPLLCLF*DNERNL
Trigger: CAGATTCCTTTCGTTATCCCAAAACAGGCACAGCAA...AGGCTCTGCTTCACCATAAATACTCATGAGAAAACCCAGGGTAAATGTAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCTTGCTGTGCCTGTTTTaGGATAACGAAAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVLLCLF*DNERNL
Trigger: CAGATTCCTTTCGTTATCCCAAAACAGGCACAGCAA...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCCTTGAAAGTGACCTTTaGGTTTGCTGTGCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVLESDL*VCCACF
Trigger: AAAACAGGCACAGCAAACCCAAAGGTCACTTTCAAG...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCACTTGAAAGTGACCTTTaGGTTTGCTGTGCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASLESDL*VCCACF
Trigger: AAAACAGGCACAGCAAACCCAAAGGTCACTTTCAAG...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCATTCATAGATGATCAGTaGTGTCACAGAGTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASFIDDQ*CHRVRN
Trigger: GTTCCTGACTCTGTGACACCACTGATCATCTATGAA...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAAGTACACCAGCTTTCTaGCTTCATCAACCCAGATAT +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASSTPAF*LHQPRY
Trigger: ATATCTGGGTTGATGAAGCCAGAAAGCTGGTGTACT...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCCCAAAGGAGAGTCTTTaGTGCCTTCAAAGTACACCA +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCPKESL*CLQSTP
Trigger: TGGTGTACTTTGAAGGCACCAAAGACTCTCCTTTGG...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
3UTR CAA 72 bp ATTCCTTTGTTTTATGAACTGGGTCATCCTCAGGACTaGAGAGTTTGTAGAGGGACACACAGTGTGGATTCT +
Preference number: 4 (lower is better)
Translates to: IPLFYELGHPQD*RVCRGTHSVDS
Trigger: AGAATCCACACTGTGTGTCCCTCTACAAACTCTCAAGTCCTGAGGATGACCCAGTTCATAAAACAAAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp GGGGTTACATTTACCCTGGGTTTTCTCATGAGTATTTATGGTGAAGCAGAGCCTTATCATTGCTGTGAATaGAAGCTATCCAGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: GVTFTLGFLMSIYGEAEPYHCCE*KLSSLD
Trigger: ATCCAGACTGGATAGCTTTCATTCACAGCAATGATA...AGGCTCTGCTTCACCATAAATACTCATGAGAAAACCCAGGGTAAATGTAACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR TCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGATATCATTGCTGTGAATaGAAGCTATCCAGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRYHCCE*KLSSLD
Trigger: ATCCAGACTGGATAGCTTTCATTCACAGCAATGATA...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGACCTGGTTACGAGGTTTaGTATCCAAATATCATTGCT +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRPGYEV*YPNIIA
Trigger: AGCAATGATATTTGGATATCAAACCTCGTAACCAGG...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCACCTGGTTACGAGGTTTaGTATCCAAATATCATTGCT +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASPGYEV*YPNIIA
Trigger: AGCAATGATATTTGGATATCAAACCTCGTAACCAGG...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR TCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCTTGTTTCTTCATAGATaGTCAGTGGTGTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVLFLHR*SVVSQS
Trigger: ACTCTGTGACACCACTGATCATCTATGAAGAAACAA...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGAAATTCCTTTGTTTTATaGACTGGGTCATCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRNSFVL*TGSSSG
Trigger: TCCTGAGGATGACCCAGTTCATAAAACAAAGGAATT...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp TCCCACTGTAACCCTTTTACCTCCTGGAAACTAGGGAACACTTTAATTAAGGAAGGGGACCACCATATATaGATAACACAGTGGGGTATT +
Preference number: 4 (lower is better)
Translates to: SHCNPFTSWKLGNTLIKEGDHHI*ITQWGI
Trigger: AATACCCCACTGTGTTATTCATATATGGTGGTCCCC...TTCCTTAATTAAAGTGTTCCCTAGTTTCCAGGAGGTAAAAGGGTTACAGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR GCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGAATAACGAAAGGAATCTaGCCTCCTTGTTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRITKGI*PPCFQH
Trigger: ATGTTGGAAACAAGGAGGGCAGATTCCTTTCGTTAT...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR GCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAATCTATAATCCCTCCTaGAGCATCAACAACAATCTC +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASIYNPS*SINNNL
Trigger: GAGATTGTTGTTGATGCTGCAGGAGGGATTATAGAT...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAAAACATAAAGTCATGTaGCGCCTTAGCCATCATGTA +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASKHKVM*RLSHHV
Trigger: TACATGATGGCTAAGGCGCCACATGACTTTATGTTT...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAAACATAAAGTCATGTaGCGCCTTAGCCATCATGTA +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVKHKVM*RLSHHV
Trigger: TACATGATGGCTAAGGCGCCACATGACTTTATGTTT...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCCTGCTGAATCCAAAATaGTGGCCCAAAATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCLLNPK*WPKIPL
Trigger: CAAAGGAATTTTGGGCCACCATTTTGGATTCAGCAG...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR TCA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGACAAATATCATTGCTGTaGATGAAAGCTATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRQISLL*MKAIQS
Trigger: AGACTGGATAGCTTTCATTCACAGCAATGATATTTG...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR GCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCATAACGAAAGGAATCTaGCCTCCTTGTTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCITKGI*PPCFQH
Trigger: ATGTTGGAAACAAGGAGGGCAGATTCCTTTCGTTAT...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCTTGTGTAAATCCATGTaGTCCTCCATCTTTGATATG +
Preference number: 4 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVLCKSM*SSIFDM
Trigger: CATATCAAAGATGGAGGACCACATGGATTTACACAA...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp GTACACCAAGTTCTACATGCGTCAGAGTTATATCACTTTCAGAGCAGCGATACGTTGTGTAAATCCATGTaGTCCTCCATCTTTGATATG +
Preference number: 4 (lower is better)
Translates to: VHQVLHASELYHFQSSDTLCKSM*SSIFDM
Trigger: CATATCAAAGATGGAGGACCACATGGATTTACACAA...CGTATCGCTGCTCTGAAAGTGATATAACTCTGACGCATGTAGAACTTGGTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR CCA 90 bp TCCCACTGTAACCCTTTTACCTCCTGGAAACTAGGGAACACTTTAATTAAGGAAAGTACACCAGCTTTCTaGCTTCATCAACCCAGATAT +
Preference number: 4 (lower is better)
Translates to: SHCNPFTSWKLGNTLIKESTPAF*LHQPRY
Trigger: ATATCTGGGTTGATGAAGCCAGAAAGCTGGTGTACT...TTCCTTAATTAAAGTGTTCCCTAGTTTCCAGGAGGTAAAAGGGTTACAGTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CCA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCACTGAATCCAAAATGGTaGCCCAAAATTCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASLNPKW*PKIPLF
Trigger: AAACAAAGGAATTTTGGGCCACCATTTTGGATTCAG...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR GCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCCAATATACTGGTGTGTaGAAAGTGAACATTCTCATC +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCQYTGV*KVNILI
Trigger: GATGAGAATGTTCACTTTGCACACACCAGTATATTG...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CCA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCCTGAATCCAAAATGGTaGCCCAAAATTCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCLNPKW*PKIPLF
Trigger: AAACAAAGGAATTTTGGGCCACCATTTTGGATTCAG...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CAA 90 bp ATCCACAGGGTGACTGGGGCCCCAGCAATAGCCACCCGGAAGATATCCGACCTCAGGAATCTGCCCTCCTaGTTTCCAACATGGGGGACG +
Preference number: 5 (lower is better)
Translates to: IHRVTGAPAIATRKISDLRNLPS*FPTWGT
Trigger: CGTCCCCCATGTTGGAAACAAGGAGGGCAGATTCCT...GAGGTCGGATATCTTCCGGGTGGCTATTGCTGGGGCCCCAGTCACCCTGTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS CCA 90 bp ATGGTAAATGCCGCTGCCAGCTTGAAACAGGAATGTTCCGCTTCCTaGGTGGTAATCATAAGCTGCGATCCCCACGGTTCCAATGCGCTT +
Preference number: 5 (lower is better)
Translates to: MVNAAASLKQECSAS*VVIISCDPHGSNAL
Trigger: AAGCGCATTGGAACCGTGGGGATCGCAGCTTATGATTACCACCCAGGAAGCGGAACATTCCTGTTTCAAGCTGGCAGCGGCATTTACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CAA 90 bp AACTGGTCAGAGACCAGCCAGGTAAGTATCTTTAGGAGGCCACTAGGTTATCCTAGGAATCTGCCCTCCTaGTTTCCAACATGGGGGACG +
Preference number: 5 (lower is better)
Translates to: NWSETSQVSIFRRPLGYPRNLPS*FPTWGT
Trigger: CGTCCCCCATGTTGGAAACAAGGAGGGCAGATTCCT...AGGATAACCTAGTGGCCTCCTAAAGATACTTACCTGGCTGGTCTCTGACCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000217434.2
CDS-3UTR CAA 90 bp CTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGAAAGGGACCTGATGGGTCATCCTCAGGACTaGAGAGTTTGTAGAGGGACA +
Preference number: 5 (lower is better)
Translates to: LYSGSPCLHCALLERDLMGHPQD*RVCRGT
Trigger: TGTCCCTCTACAAACTCTCAAGTCCTGAGGATGACC...CATCAGGTCCCTTTCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS CCA 90 bp TCAGCTGACTCCAAGAATACCGTTCGACATAAAAAGGCTCCAGTTTaGGTCGGTCCTGTGATTCACCATTTCCCTCCTCACACTCTGCAG +
Preference number: 5 (lower is better)
Translates to: SADSKNTVRHKKAPV*VGPVIHHFPPHTLQ
Trigger: CTGCAGAGTGTGAGGAGGGAAATGGTGAATCACAGGACCGACCCAAACTGGAGCCTTTTTATGTCGAACGGTATTCTTGGAGTCAGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS CCA 90 bp GTGAGGCCCATCTGGATCCGTCCTCTTTACAAACATAAAGTCATGTaGCGCCTTAGCCATCATGTAGCCGTGGTATTTTCTGGTATCAGC +
Preference number: 5 (lower is better)
Translates to: VRPIWIRPLYKHKVM*RLSHHVAVVFSGIS
Trigger: GCTGATACCAGAAAATACCACGGCTACATGATGGCTAAGGCGCCACATGACTTTATGTTTGTAAAGAGGACGGATCCAGATGGGCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CAA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAAGGAATCTGCCCTCCTaGTTTCCAACATGGGGGACG +
Preference number: 5 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASRNLPS*FPTWGT
Trigger: CGTCCCCCATGTTGGAAACAAGGAGGGCAGATTCCT...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS TCA 90 bp AATCATAAGCTGCGATCCCCACGGTTCCAATGCGCTTTCTTTCTCTaGGTAGCTCTTCCTCTCGAGAATACATCCCATAGTCTAGTGTCG +
Preference number: 5 (lower is better)
Translates to: NHKLRSPRFQCAFFL*VALPLENTSHSLVS
Trigger: CGACACTAGACTATGGGATGTATTCTCGAGAGGAAGAGCTACTCAGAGAAAGAAAGCGCATTGGAACCGTGGGGATCGCAGCTTATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS GCA 90 bp GACCTTTGGGTTTGCTGTGCCTGTTTTGGGATAACGAAAGGAATCTaGCCTCCTTGTTTCCAACATGGGGGACGTAACATGAATAATCTC +
Preference number: 5 (lower is better)
Translates to: DLWVCCACFGITKGI*PPCFQHGGRNMNNL
Trigger: GAGATTATTCATGTTACGTCCCCCATGTTGGAAACAAGGAGGGCAGATTCCTTTCGTTATCCCAAAACAGGCACAGCAAACCCAAAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS CCA 90 bp ACCAGTAGCCAGAGTATCTGTCAAATTCTTCTTGAAGAACAAAGGTaGCAACACCAGCTGATCTGGGATCCTCTTCCATGTTGGCTAGCT +
Preference number: 5 (lower is better)
Translates to: TSSQSICQILLEEQR*QHQLIWDPLPCWLA
Trigger: AGCTAGCCAACATGGAAGAGGATCCCAGATCAGCTGGTGTTGCCACCTTTGTTCTTCAAGAAGAATTTGACAGATACTCTGGCTACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS CCA 90 bp TCCTGCAGCATCAACAACAATCTCCGACATCTTGAAAGTGACCTTTaGGTTTGCTGTGCCTGTTTTGGGATAACGAAAGGAATCTGCCCT +
Preference number: 5 (lower is better)
Translates to: SCSINNNLRHLESDL*VCCACFGITKGICP
Trigger: AGGGCAGATTCCTTTCGTTATCCCAAAACAGGCACAGCAAACCCAAAGGTCACTTTCAAGATGTCGGAGATTGTTGTTGATGCTGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CAA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGGTCATCCTCAGGACTaGAGAGTTTGTAGAGGGACA +
Preference number: 5 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASGHPQD*RVCRGT
Trigger: TGTCCCTCTACAAACTCTCAAGTCCTGAGGATGACC...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CAA 90 bp CTCTATTCTGGCAGTCCCTGTCTTCACTGTGCTCTCTTGGAAAGGGACCTGATGTGGCCCAAAATTCCTTaGTTTTATGAACTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: LYSGSPCLHCALLERDLMWPKIP*FYELGH
Trigger: ATGACCCAGTTCATAAAACAAAGGAATTTTGGGCCA...CATCAGGTCCCTTTCCAAGAGAGCACAGTGAAGACAGGGACTGCCAGAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CAA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAACTCCTTTAAACCGATaGTTCACCAGCTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASTPLNR*FTSCTW
Trigger: CCAGGTGCAGCTGGTGAACAATCGGTTTAAAGGAGT...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS GCA 90 bp AGCATCAACAACAATCTCCGACATCTTGAAAGTGACCTTTGGGTTTaGTGTGCCTGTTTTGGGATAACGAAAGGAATCTGCCCTCCTTGT +
Preference number: 5 (lower is better)
Translates to: SINNNLRHLESDLWV*CACFGITKGICPPC
Trigger: ACAAGGAGGGCAGATTCCTTTCGTTATCCCAAAACAGGCACAGCAAACCCAAAGGTCACTTTCAAGATGTCGGAGATTGTTGTTGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CAA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCCTAGTTTCCACTAAATaGGGCCGCAAAGGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVLVSTK*GRKGCC
Trigger: ACAACAGCCTTTGCGGCCCAATTTAGTGGAAACTAG...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CAA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCACTAGTTTCCACTAAATaGGGCCGCAAAGGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASLVSTK*GRKGCC
Trigger: ACAACAGCCTTTGCGGCCCAATTTAGTGGAAACTAG...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CAA 90 bp TCATCAACCCAGATATTAGATCCATGCCGGCCAAGTACTTCCCATTCACCACTGCCCTGGTTACGAGGTTaGATATCCAAATATCATTGC +
Preference number: 5 (lower is better)
Translates to: SSTQILDPCRPSTSHSPLPWLRG*ISKYHC
Trigger: GCAATGATATTTGGATATCAAACCTCGTAACCAGGG...CAGTGGTGAATGGGAAGTACTTGGCCGGCATGGATCTAATATCTGGGTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR CAA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCATCTTTGATAGGACACTaGAAATCACTTGGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASSLIGH*KSLGAG
Trigger: ACCTGCCCCAAGTGATTTCAAGTGTCCTATCAAAGA...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CAA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGATCTTTGATAGGACACTaGAAATCACTTGGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRSLIGH*KSLGAG
Trigger: ACCTGCCCCAAGTGATTTCAAGTGTCCTATCAAAGA...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS TCA 90 bp ATTGTGTACGTATGTGATCCTCCGCTCTTCCCTGGTTACGAGGTTTaGTATCCAAATATCATTGCTGTGAATGAAAGCTATCCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: IVYVCDPPLFPGYEV*YPNIIAVNESYPVW
Trigger: CCAGACTGGATAGCTTTCATTCACAGCAATGATATTTGGATATCAAACCTCGTAACCAGGGAAGAGCGGAGGATCACATACGTACACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CAA 90 bp GGGGTTACATTTACCCTGGGTTTTCTCATGAGTATTTATGGTGAAGCAGAGCCTCCCTGGTTACGAGGTTaGATATCCAAATATCATTGC +
Preference number: 5 (lower is better)
Translates to: GVTFTLGFLMSIYGEAEPPWLRG*ISKYHC
Trigger: GCAATGATATTTGGATATCAAACCTCGTAACCAGGG...AGGCTCTGCTTCACCATAAATACTCATGAGAAAACCCAGGGTAAATGTAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034960.14
CDS-3UTR CAA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAACAATCTCCGACATCTaGAAAGTGACCTTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASTISDI*KVTFGF
Trigger: AAACCCAAAGGTCACTTTCAAGATGTCGGAGATTGT...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CAA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCATTCAGGCGGAAATACTaGACTCCTTTAAACCGATTG +
Preference number: 5 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASFRRKY*TPLNRL
Trigger: CAATCGGTTTAAAGGAGTCAAGTATTTCCGCCTGAA...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CAA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCCTGGAGTCCTTCCACTaGATCATCGATTTCTATTTG +
Preference number: 5 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVLESFH*IIDFYL
Trigger: CAAATAGAAATCGATGATCAAGTGGAAGGACTCCAG...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS TCA 90 bp CTTCCCTGGTTACGAGGTTTGATATCCAAATATCATTGCTGTGAATaGAAGCTATCCAGTCTGGATCAGCAGGGCATAATTTTGGATCCA +
Preference number: 5 (lower is better)
Translates to: LPWLRGLISKYHCCE*KLSSLDQQGIILDP
Trigger: TGGATCCAAAATTATGCCCTGCTGATCCAGACTGGATAGCTTTCATTCACAGCAATGATATTTGGATATCAAACCTCGTAACCAGGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CAA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCCCCTGGTTACGAGGTTaGATATCCAAATATCATTGC +
Preference number: 5 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCPWLRG*ISKYHC
Trigger: GCAATGATATTTGGATATCAAACCTCGTAACCAGGG...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CAA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCTCTGTCAAATTCTTCTaGAAGAACAAAGGTGGCAAC +
Preference number: 5 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVSVKFF*KNKGGN
Trigger: GTTGCCACCTTTGTTCTTCAAGAAGAATTTGACAGA...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CAA 90 bp GCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCAGATCTGTCAAATTCTTCTaGAAGAACAAAGGTGGCAAC +
Preference number: 5 (lower is better)
Translates to: ANPLCLVRQCTPSSTCVRSVKFF*KNKGGN
Trigger: GTTGCCACCTTTGTTCTTCAAGAAGAATTTGACAGA...TCTGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS-3UTR CAA 90 bp GTGTGGATTCTTCTGGTTGCTGTACTTACTTATGAAGAAGTCACAATGCCGGCTTCTGTCAAATTCTTCTaGAAGAACAAAGGTGGCAAC +
Preference number: 5 (lower is better)
Translates to: VWILLVAVLTYEEVTMPASVKFF*KNKGGN
Trigger: GTTGCCACCTTTGTTCTTCAAGAAGAATTTGACAGA...AGCCGGCATTGTGACTTCTTCATAAGTAAGTACAGCAACCAGAAGAATCCACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS-3UTR CAA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCACAATCTCCGACATCTaGAAAGTGACCTTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCTISDI*KVTFGF
Trigger: AAACCCAAAGGTCACTTTCAAGATGTCGGAGATTGT...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CAA 90 bp TGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCATGTGGATTCTTCTGGTaGCTGTACTTACTTATGAAG +
Preference number: 5 (lower is better)
Translates to: WLTLFVWLDSVHQVLHASCGFFW*LYLLMK
Trigger: CTTCATAAGTAAGTACAGCAACCAGAAGAATCCACA...TGACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CAA 90 bp TTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCGTCTGGCCCAAAATTCCTTaGTTTTATGAACTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: LANPLCLVRQCTPSSTCVWPKIP*FYELGH
Trigger: ATGACCCAGTTCATAAAACAAAGGAATTTTGGGCCA...GACGCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CAA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCTTCAGGCGGAAATACTaGACTCCTTTAAACCGATTG +
Preference number: 5 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCFRRKY*TPLNRL
Trigger: CAATCGGTTTAAAGGAGTCAAGTATTTCCGCCTGAA...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CAA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCCTGGAGTCCTTCCACTaGATCATCGATTTCTATTTG +
Preference number: 5 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCLESFH*IIDFYL
Trigger: CAAATAGAAATCGATGATCAAGTGGAAGGACTCCAG...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS TCA 90 bp GCTCTGGCAATATATTCAACTCCCTCAAACAGAATCTCGAAAGGTTaGACCAGTTCTTTATCTATGACATCTATAATCCCTCCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: ALAIYSTPSNRISKG*TSSLSMTSIIPPAA
Trigger: TGCTGCAGGAGGGATTATAGATGTCATAGATAAAGAACTGGTTCAACCTTTCGAGATTCTGTTTGAGGGAGTTGAATATATTGCCAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS GCA 90 bp GAAAGGTTGAACCAGTTCTTTATCTATGACATCTATAATCCCTCCTaGAGCATCAACAACAATCTCCGACATCTTGAAAGTGACCTTTGG +
Preference number: 5 (lower is better)
Translates to: ERLNQFFIYDIYNPS*SINNNLRHLESDLW
Trigger: CCAAAGGTCACTTTCAAGATGTCGGAGATTGTTGTTGATGCTGCAGGAGGGATTATAGATGTCATAGATAAAGAACTGGTTCAACCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS-3UTR CAA 90 bp CTATTGGCTAACCCTCTTTGTTTGGTTAGACAGTGTACACCAAGTTCTACATGCTGTGGATTCTTCTGGTaGCTGTACTTACTTATGAAG +
Preference number: 5 (lower is better)
Translates to: LLANPLCLVRQCTPSSTCCGFFW*LYLLMK
Trigger: CTTCATAAGTAAGTACAGCAACCAGAAGAATCCACA...GCATGTAGAACTTGGTGTACACTGTCTAACCAAACAAAGAGGGTTAGCCAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS GCA 90 bp TTATCTATGACATCTATAATCTGTTTTGGGATAACGAAAGGAATCTaGCCTCCTTGTTTCCAACATGGGGGACGTAACATGAATAATCTC +
Preference number: 5 (lower is better)
Translates to: LSMTSIICFGITKGI*PPCFQHGGRNMNNL
Trigger: GAGATTATTCATGTTACGTCCCCCATGTTGGAAACAAGGAGGGCAGATTCCTTTCGTTATCCCAAAACAGATTATAGATGTCATAGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS CCA 72 bp GCCGCTGCCAGCTTGAAACAGGAATGTTCCGCTTCCTaGGTGGTAATCATAAGCTGCGATCCCCACGGTTCC +
Preference number: 6 (lower is better)
Translates to: AAASLKQECSAS*VVIISCDPHGS
Trigger: GGAACCGTGGGGATCGCAGCTTATGATTACCACCCAGGAAGCGGAACATTCCTGTTTCAAGCTGGCAGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS CAA 72 bp GTGGCAACACCAGCTGATCTGGGATCCTCTTCCATGTaGGCTAGCTCATTGTGTACGTATGTGATCCTCCGC +
Preference number: 6 (lower is better)
Translates to: VATPADLGSSSM*ASSLCTYVILR
Trigger: GCGGAGGATCACATACGTACACAATGAGCTAGCCAACATGGAAGAGGATCCCAGATCAGCTGGTGTTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS CAA 90 bp GCAACACCAGCTGATCTGGGATCCTCTTCCATGTTGGCTAGCTCATaGTGTACGTATGTGATCCTCCGCTCTTCCCTGGTTACGAGGTTT +
Preference number: 6 (lower is better)
Translates to: ATPADLGSSSMLASS*CTYVILRSSLVTRF
Trigger: AAACCTCGTAACCAGGGAAGAGCGGAGGATCACATACGTACACAATGAGCTAGCCAACATGGAAGAGGATCCCAGATCAGCTGGTGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS CAA 90 bp AGAACAAAGGTGGCAACACCAGCTGATCTGGGATCCTCTTCCATGTaGGCTAGCTCATTGTGTACGTATGTGATCCTCCGCTCTTCCCTG +
Preference number: 6 (lower is better)
Translates to: RTKVATPADLGSSSM*ASSLCTYVILRSSL
Trigger: CAGGGAAGAGCGGAGGATCACATACGTACACAATGAGCTAGCCAACATGGAAGAGGATCCCAGATCAGCTGGTGTTGCCACCTTTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS GCA 72 bp CAGGAATGTTCCGCTTCCTGGGTGGTAATCATAAGCTaGGATCCCCACGGTTCCAATGCGCTTTCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: QECSASWVVIIS*DPHGSNALSFS
Trigger: AGAGAAAGAAAGCGCATTGGAACCGTGGGGATCGCAGCTTATGATTACCACCCAGGAAGCGGAACATTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS CAA 72 bp GCTGATCTGGGATCCTCTTCCATGTTGGCTAGCTCATaGTGTACGTATGTGATCCTCCGCTCTTCCCTGGTT +
Preference number: 6 (lower is better)
Translates to: ADLGSSSMLASS*CTYVILRSSLV
Trigger: AACCAGGGAAGAGCGGAGGATCACATACGTACACAATGAGCTAGCCAACATGGAAGAGGATCCCAGATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS TCA 72 bp GTTCTCACCAGACATGGCAAGGTAATAGACCCTGTCTaGGTGAGGCCCATCTGGATCCGTCCTCTTTACAAA +
Preference number: 6 (lower is better)
Translates to: VLTRHGKVIDPV*VRPIWIRPLYK
Trigger: TTTGTAAAGAGGACGGATCCAGATGGGCCTCACTCAGACAGGGTCTATTACCTTGCCATGTCTGGTGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS CAA 90 bp TCCATGTGGTCCTCCATCTTTGATATGGTAAATGCCGCTGCCAGCTaGAAACAGGAATGTTCCGCTTCCTGGGTGGTAATCATAAGCTGC +
Preference number: 6 (lower is better)
Translates to: SMWSSIFDMVNAAAS*KQECSASWVVIISC
Trigger: GCAGCTTATGATTACCACCCAGGAAGCGGAACATTCCTGTTTCAAGCTGGCAGCGGCATTTACCATATCAAAGATGGAGGACCACATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS TCA 72 bp CCTCTTCCATGTTGGCTAGCTCATTGTGTACGTATGTaGTCCTCCGCTCTTCCCTGGTTACGAGGTTTGATA +
Preference number: 6 (lower is better)
Translates to: PLPCWLAHCVRM*SSALPWLRGLI
Trigger: TATCAAACCTCGTAACCAGGGAAGAGCGGAGGATCACATACGTACACAATGAGCTAGCCAACATGGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS GCA 72 bp GTTTGCTGTGCCTGTTTTGGGATAACGAAAGGAATCTaGCCTCCTTGTTTCCAACATGGGGGACGTAACATG +
Preference number: 6 (lower is better)
Translates to: VCCACFGITKGI*PPCFQHGGRNM
Trigger: CATGTTACGTCCCCCATGTTGGAAACAAGGAGGGCAGATTCCTTTCGTTATCCCAAAACAGGCACAGCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS CCA 72 bp TCCAAGAATACCGTTCGACATAAAAAGGCTCCAGTTTaGGTCGGTCCTGTGATTCACCATTTCCCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: SKNTVRHKKAPV*VGPVIHHFPPH
Trigger: GTGAGGAGGGAAATGGTGAATCACAGGACCGACCCAAACTGGAGCCTTTTTATGTCGAACGGTATTCTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS CAA 72 bp TCCTCCATCTTTGATATGGTAAATGCCGCTGCCAGCTaGAAACAGGAATGTTCCGCTTCCTGGGTGGTAATC +
Preference number: 6 (lower is better)
Translates to: SSIFDMVNAAAS*KQECSASWVVI
Trigger: GATTACCACCCAGGAAGCGGAACATTCCTGTTTCAAGCTGGCAGCGGCATTTACCATATCAAAGATGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS CAA 72 bp ATCCCTCCTGCAGCATCAACAACAATCTCCGACATCTaGAAAGTGACCTTTGGGTTTGCTGTGCCTGTTTTG +
Preference number: 6 (lower is better)
Translates to: IPPAASTTISDI*KVTFGFAVPVL
Trigger: CAAAACAGGCACAGCAAACCCAAAGGTCACTTTCAAGATGTCGGAGATTGTTGTTGATGCTGCAGGAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS GCA 72 bp AACAATCTCCGACATCTTGAAAGTGACCTTTGGGTTTaGTGTGCCTGTTTTGGGATAACGAAAGGAATCTGC +
Preference number: 6 (lower is better)
Translates to: NNLRHLESDLWV*CACFGITKGIC
Trigger: GCAGATTCCTTTCGTTATCCCAAAACAGGCACAGCAAACCCAAAGGTCACTTTCAAGATGTCGGAGATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS CCA 72 bp ATCTGGATCCGTCCTCTTTACAAACATAAAGTCATGTaGCGCCTTAGCCATCATGTAGCCGTGGTATTTTCT +
Preference number: 6 (lower is better)
Translates to: IWIRPLYKHKVM*RLSHHVAVVFS
Trigger: AGAAAATACCACGGCTACATGATGGCTAAGGCGCCACATGACTTTATGTTTGTAAAGAGGACGGATCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS GCA 72 bp ACATCTATAATCTGTTTTGGGATAACGAAAGGAATCTaGCCTCCTTGTTTCCAACATGGGGGACGTAACATG +
Preference number: 6 (lower is better)
Translates to: TSIICFGITKGI*PPCFQHGGRNM
Trigger: CATGTTACGTCCCCCATGTTGGAAACAAGGAGGGCAGATTCCTTTCGTTATCCCAAAACAGATTATAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000217434.2
CDS CCA 72 bp ATCAACAACAATCTCCGACATCTTGAAAGTGACCTTTaGGTTTGCTGTGCCTGTTTTGGGATAACGAAAGGA +
Preference number: 6 (lower is better)
Translates to: INNNLRHLESDL*VCCACFGITKG
Trigger: TCCTTTCGTTATCCCAAAACAGGCACAGCAAACCCAAAGGTCACTTTCAAGATGTCGGAGATTGTTGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS CAA 72 bp TCCATTCGTATATTGGGACAACTAGTTTCCACTAAATaGGGCCGCAAAGGCTGTTGTGTAAATCCATGTGGT +
Preference number: 6 (lower is better)
Translates to: SIRILGQLVSTK*GRKGCCVNPCG
Trigger: ACCACATGGATTTACACAACAGCCTTTGCGGCCCAATTTAGTGGAAACTAGTTGTCCCAATATACGAATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS CAA 90 bp AATTTTGGATCCATTCGTATATTGGGACAACTAGTTTCCACTAAATaGGGCCGCAAAGGCTGTTGTGTAAATCCATGTGGTCCTCCATCT +
Preference number: 6 (lower is better)
Translates to: NFGSIRILGQLVSTK*GRKGCCVNPCGPPS
Trigger: AGATGGAGGACCACATGGATTTACACAACAGCCTTTGCGGCCCAATTTAGTGGAAACTAGTTGTCCCAATATACGAATGGATCCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS CAA 90 bp GGCTCTGGCAATATATTCAACTCCCTCAAACAGAATCTCGAAAGGTaGAACCAGTTCTTTATCTATGACATCTATAATCCCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: GSGNIFNSLKQNLER*NQFFIYDIYNPSCS
Trigger: GCTGCAGGAGGGATTATAGATGTCATAGATAAAGAACTGGTTCAACCTTTCGAGATTCTGTTTGAGGGAGTTGAATATATTGCCAGAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS TCA 72 bp GTATGTGATCCTCCGCTCTTCCCTGGTTACGAGGTTTaGTATCCAAATATCATTGCTGTGAATGAAAGCTAT +
Preference number: 6 (lower is better)
Translates to: VCDPPLFPGYEV*YPNIIAVNESY
Trigger: ATAGCTTTCATTCACAGCAATGATATTTGGATATCAAACCTCGTAACCAGGGAAGAGCGGAGGATCACATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS TCA 72 bp TTACGAGGTTTGATATCCAAATATCATTGCTGTGAATaGAAGCTATCCAGTCTGGATCAGCAGGGCATAATT +
Preference number: 6 (lower is better)
Translates to: LRGLISKYHCCE*KLSSLDQQGII
Trigger: AATTATGCCCTGCTGATCCAGACTGGATAGCTTTCATTCACAGCAATGATATTTGGATATCAAACCTCGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
ENSMUST00000217434.2
CDS GCA 72 bp AACCAGTTCTTTATCTATGACATCTATAATCCCTCCTaGAGCATCAACAACAATCTCCGACATCTTGAAAGT +
Preference number: 6 (lower is better)
Translates to: NQFFIYDIYNPS*SINNNLRHLES
Trigger: ACTTTCAAGATGTCGGAGATTGTTGTTGATGCTGCAGGAGGGATTATAGATGTCATAGATAAAGAACTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2
CDS TCA 72 bp ATATATTCAACTCCCTCAAACAGAATCTCGAAAGGTTaGACCAGTTCTTTATCTATGACATCTATAATCCCT +
Preference number: 6 (lower is better)
Translates to: IYSTPSNRISKG*TSSLSMTSIIP
Trigger: AGGGATTATAGATGTCATAGATAAAGAACTGGTTCAACCTTTCGAGATTCTGTTTGAGGGAGTTGAATATAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034960.14
ENSMUST00000167773.2