Pregenerated sensors for DPP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035000Ensembl transcript IDs: ENSMUST00000047812.8
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTCAGGGCGGCCTTCCCTTAGCGCATGCGCCCCTGATGCTGGTGTaGTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGCAT | + |
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Preference number: 1 (lower is better) Translates to: RQGGLPLAHAPLMLV*SEKEARSMCFQRMH Trigger: ATGCATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAGGGGCGCATGCGCTAAGGGAAGGCCGCCCTGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR TCA 90 bp | GGGCGGCCTTCCCTTAGCGCATGCGCCCCTGATGCTGGTGTGCTCTaGGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGCATATGTC | + |
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Preference number: 1 (lower is better) Translates to: GRPSLSACAPDAGVL*EGSSIHVLPENAYV Trigger: GACATATGCATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAGGGGCGCATGCGCTAAGGGAAGGCCGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR TCA 90 bp | CTAATACTCCGAGAACCACAGTGCCCGGAATGGCACAGACTGAAGTaGTCCTGGATAGTGAAGCGTCAGGGCGGCCTTCCCTTAGCGCAT | + |
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Preference number: 1 (lower is better) Translates to: LILREPQCPEWHRLK*SWIVKRQGGLPLAH Trigger: ATGCGCTAAGGGAAGGCCGCCCTGACGCTTCACTATCCAGGATCACTTCAGTCTGTGCCATTCCGGGCACTGTGGTTCTCGGAGTATTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR CCA 90 bp | AGTCTGGCAGTGAACAGCTCTTCTCGAGGCGAGCTGACAGTAGCCTaGTTGGTTTGTATGCTTGGACCTGGGTTTCTAGCCATACTCCCT | + |
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Preference number: 1 (lower is better) Translates to: SLAVNSSSRGELTVA*LVCMLGPGFLAILP Trigger: AGGGAGTATGGCTAGAAACCCAGGTCCAAGCATACAAACCAACCAGGCTACTGTCAGCTCGCCTCGAGAAGAGCTGTTCACTGCCAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR CCA 90 bp | CACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTGGCACCTaGGGCCCTTACATTGCTGGCAGCGTCCCTTGCATTTCTTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: HPCCVFVAPIAITGT*GPYIAGSVPCISLE Trigger: CTCCAAAGAAATGCAAGGGACGCTGCCAGCAATGTAAGGGCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR CCA 90 bp | TTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTaGCACCTGGGGCCCTTACATTGCTGGCAGCGTCCCTTGCATTTC | + |
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Preference number: 1 (lower is better) Translates to: FPSPLLCFCSTYSHN*HLGPLHCWQRPLHF Trigger: GAAATGCAAGGGACGCTGCCAGCAATGTAAGGGCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR CCA 90 bp | TGTAGCACCTATAGCCATAACTGGCACCTGGGGCCCTTACATTGCTaGCAGCGTCCCTTGCATTTCTTTGGAGTCTATTCAACTGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: CSTYSHNWHLGPLHC*QRPLHFFGVYSTAV Trigger: CACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGACGCTGCCAGCAATGTAAGGGCCCCAGGTGCCAGTTATGGCTATAGGTGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR GCA 90 bp | CTGGTTGGTTTGTATGCTTGGACCTGGGTTTCTAGCCATACTCCCTaGTCCCTCTTCTCTTGTTGCTGCCCTAATGACATCATTACCCAC | + |
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Preference number: 1 (lower is better) Translates to: LVGLYAWTWVSSHTP*SLFSCCCPNDIITH Trigger: GTGGGTAATGATGTCATTAGGGCAGCAACAAGAGAAGAGGGAGCAGGGAGTATGGCTAGAAACCCAGGTCCAAGCATACAAACCAACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR GCA 90 bp | GCCATAACTGGCACCTGGGGCCCTTACATTGCTGGCAGCGTCCCTTaGATTTCTTTGGAGTCTATTCAACTGCTGTGGTTTTACTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: AITGTWGPYIAGSVP*ISLESIQLLWFYLE Trigger: TTCTAAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGACGCTGCCAGCAATGTAAGGGCCCCAGGTGCCAGTTATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR GCA 90 bp | TTTTGTAGCACCTATAGCCATAACTGGCACCTGGGGCCCTTACATTaGTGGCAGCGTCCCTTGCATTTCTTTGGAGTCTATTCAACTGCT | + |
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Preference number: 1 (lower is better) Translates to: FCSTYSHNWHLGPLH*WQRPLHFFGVYSTA Trigger: AGCAGTTGAATAGACTCCAAAGAAATGCAAGGGACGCTGCCAGCAATGTAAGGGCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR GCA 90 bp | TGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATaGATATGTCCCTCAGAGACAGGTCTATGTCCCTTAGTGACGTTA | + |
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Preference number: 1 (lower is better) Translates to: WCALRRKLDPCASRE*ICPSETGLCPLVTL Trigger: TAACGTCACTAAGGGACATAGACCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR GCA 90 bp | CACACTGACAGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTaGAGGTGGATACTGCTGCACATGGTGAAAGTGCTGTATTCTAAA | + |
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Preference number: 1 (lower is better) Translates to: HTDRNMSPLSLDLEL*RWILLHMVKVLYSK Trigger: TTTAGAATACAGCACTTTCACCATGTGCAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCTGTCAGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR CCA 90 bp | GACAGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTGCAGGTaGATACTGCTGCACATGGTGAAAGTGCTGTATTCTAAAATAGGA | + |
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Preference number: 1 (lower is better) Translates to: DRNMSPLSLDLELCR*ILLHMVKVLYSKIG Trigger: TCCTATTTTAGAATACAGCACTTTCACCATGTGCAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR TCA 90 bp | TCCCTTAGTGACGTTACTAGCTCTTGTGCTTTTCAAACTTACTCTTaGGTTCACTTAGAACTTCCGCATCAGGTTCTTAATCTAATTCAC | + |
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Preference number: 1 (lower is better) Translates to: SLSDVTSSCAFQTYS*VHLELPHQVLNLIH Trigger: GTGAATTAGATTAAGAACCTGATGCGGAAGTTCTAAGTGAACTCAAGAGTAAGTTTGAAAAGCACAAGAGCTAGTAACGTCACTAAGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR CAA 90 bp | AGTGAACAGCTCTTCTCGAGGCGAGCTGACAGTAGCCTGGTTGGTTaGTATGCTTGGACCTGGGTTTCTAGCCATACTCCCTGCTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: SEQLFSRRADSSLVG*YAWTWVSSHTPCSL Trigger: GAGGGAGCAGGGAGTATGGCTAGAAACCCAGGTCCAAGCATACAAACCAACCAGGCTACTGTCAGCTCGCCTCGAGAAGAGCTGTTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR CAA 90 bp | CTGGCAGTGAACAGCTCTTCTCGAGGCGAGCTGACAGTAGCCTGGTaGGTTTGTATGCTTGGACCTGGGTTTCTAGCCATACTCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LAVNSSSRGELTVAW*VCMLGPGFLAILPA Trigger: AGCAGGGAGTATGGCTAGAAACCCAGGTCCAAGCATACAAACCAACCAGGCTACTGTCAGCTCGCCTCGAGAAGAGCTGTTCACTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATGCTGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGGTCACCTCTGTCCCTTaGTCTAGAACTTTGCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LMLVCSEKEARSMCFQRMVTSVP*SRTLQV Trigger: CACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGAC...CATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR CCA 90 bp | AGAACCACAGTGCCCGGAATGGCACAGACTGAAGTGATCCTGGATAGTGAAGCGGAGCTGACAGTAGCCTaGTTGGTTTGTATGCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: RTTVPGMAQTEVILDSEAELTVA*LVCMLG Trigger: TCCAAGCATACAAACCAACCAGGCTACTGTCAGCTC...CGCTTCACTATCCAGGATCACTTCAGTCTGTGCCATTCCGGGCACTGTGGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR CAA 90 bp | GGCACCTGGGGCCCTTACATTGCTGGCAGCGTCCCTTGCATTTCTTaGGAGTCTATTCAACTGCTGTGGTTTTACTTAGAAGTCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GTWGPYIAGSVPCIS*ESIQLLWFYLEVSA Trigger: AGCACTGACTTCTAAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGACGCTGCCAGCAATGTAAGGGCCCCAGGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR TCA 90 bp | AGAACCACAGTGCCCGGAATGGCACAGACTGAAGTGATCCTGGATAGTGAAGCGGTGGCATCAAGCTCATaGATATCTAATCCCACCCTT | + |
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Preference number: 2 (lower is better) Translates to: RTTVPGMAQTEVILDSEAVASSS*ISNPTL Trigger: AAGGGTGGGATTAGATATTCATGAGCTTGATGCCAC...CGCTTCACTATCCAGGATCACTTCAGTCTGTGCCATTCCGGGCACTGTGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR GCA 90 bp | AGAACCACAGTGCCCGGAATGGCACAGACTGAAGTGATCCTGGATAGTGAAGCGTTTCTCAGAAAACTGTaGCAGTCTGGCAGTGAACAG | + |
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Preference number: 2 (lower is better) Translates to: RTTVPGMAQTEVILDSEAFLRKL*QSGSEQ Trigger: CTGTTCACTGCCAGACTGGCACAGTTTTCTGAGAAA...CGCTTCACTATCCAGGATCACTTCAGTCTGTGCCATTCCGGGCACTGTGGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR GCA 90 bp | AGAACCACAGTGCCCGGAATGGCACAGACTGAAGTGATCCTGGATAGTGAAGCGCTTTCCCATCACCCTTaGTGTGTTTTTGTAGCACCT | + |
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Preference number: 2 (lower is better) Translates to: RTTVPGMAQTEVILDSEALSHHP*CVFVAP Trigger: AGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAG...CGCTTCACTATCCAGGATCACTTCAGTCTGTGCCATTCCGGGCACTGTGGTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR CAA 90 bp | AGCCATAACTGGCACCTGGGGCCCTTACATTGCTGGCAGCGTCCCTaGCATTTCTTTGGAGTCTATTCAACTGCTGTGGTTTTACTTAGA | + |
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Preference number: 2 (lower is better) Translates to: SHNWHLGPLHCWQRP*HFFGVYSTAVVLLR Trigger: TCTAAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGACGCTGCCAGCAATGTAAGGGCCCCAGGTGCCAGTTATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR TCA 90 bp | TATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTGGCTCAGTGCCAGTCTGGCAGTaGACAGCTCTTCTCGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: YLIGSFHFCHVCNSCCGSVPVWQ*TALLEA Trigger: CGCCTCGAGAAGAGCTGTTCACTGCCAGACTGGCAC...TGAGCCACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATGCTGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGGTTGGTTTGTATGCTTaGACCTGGGTTTCTAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: LMLVCSEKEARSMCFQRMVGLYA*TWVSSH Trigger: ATGGCTAGAAACCCAGGTCCAAGCATACAAACCAAC...CATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR GCA 90 bp | CTGATGCTGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGGCTGTGAGCCTCACATaGTCCCCTAGATTAAATTAT | + |
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Preference number: 2 (lower is better) Translates to: LMLVCSEKEARSMCFQRMAVSLT*SPRLNY Trigger: ATAATTTAATCTAGGGGAGCATGTGAGGCTCACAGC...CATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCGATCCATGTGCTTCCAGAGAATGCATATGTCCCTCAGAGACAGGTCTACTGGAGAAAGCAGCCTaGAATGTCTCAATGCAACAT | + |
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Preference number: 2 (lower is better) Translates to: KLDPCASRECICPSETGLLEKAA*NVSMQH Trigger: ATGTTGCATTGAGACATTTCAGGCTGCTTTCTCCAG...TAGACCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATGCTGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGGAAACCATCATTGCCTaGAAAATGTGTGCTGTGATA | + |
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Preference number: 2 (lower is better) Translates to: LMLVCSEKEARSMCFQRMETIIA*KMCAVI Trigger: TATCACAGCACACATTTTTCAGGCAATGATGGTTTC...CATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCTCGATCCATGTGCTTCCAGAGAATGCATATGTCCCTCAGAGACAGGTCTACTTGATCTAGAACTTTaGAGGTGGATACTGCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: KLDPCASRECICPSETGLLDLEL*RWILLH Trigger: GTGCAGCAGTATCCACCTGCAAAGTTCTAGATCAAG...TAGACCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTGCAGGTGGATACTGCTGTCCCTCTTCTCTTGTTaGTGCCCTAATGACATCATT | + |
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Preference number: 2 (lower is better) Translates to: RNMSPLSLDLELCRWILLSLFSC*CPNDII Trigger: AATGATGTCATTAGGGCAGCAACAAGAGAAGAGGGA...CAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCTCGATCCATGTGCTTCCAGAGAATGCATATGTCCCTCAGAGACAGGTCTACTTACCAGCAGTGCTTaGAATGGAAGAATAGGACTT | + |
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Preference number: 2 (lower is better) Translates to: KLDPCASRECICPSETGLLTSSA*NGRIGL Trigger: AAGTCCTATTCTTCCATTGCAAGCACTGCTGGTAAG...TAGACCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCGATCCATGTGCTTCCAGAGAATGCATATGTCCCTCAGAGACAGGTCTATTTATGTTTTCACACTaGCAGGAACATGTCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: KLDPCASRECICPSETGLFMFSH*QEHVTS Trigger: AGAGGTGACATGTTCCTGTCAGTGTGAAAACATAAA...TAGACCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR GCA 90 bp | ACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTGCTGGCAGCGTCCCTTaGATTTCTTTGGAGTCTATT | + |
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Preference number: 2 (lower is better) Translates to: TMLSHHPCCVFVAPIAITAGSVP*ISLESI Trigger: AATAGACTCCAAAGAAATGCAAGGGACGCTGCCAGC...AGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR GCA 90 bp | CACCCTTATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTCGATATGTTCCAAGCTaGCTCTTTTCACTAGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: HPYLIGSFHFCHVCNSCCRYVPS*LFSLGD Trigger: GTCTCCTAGTGAAAAGAGGCAGCTTGGAACATATCG...ACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATAAGGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTGCAGGTGGATACTGCTGTCTATTCAACTGCTGTaGTTTTACTTAGAAGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: RNMSPLSLDLELCRWILLSIQLL*FYLEVS Trigger: ACTGACTTCTAAGTAAAACCACAGCAGTTGAATAGA...CAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR GCA 90 bp | CACCCTTATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTAAAGCACATTTACAATaGTTTCCCATCACCCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: HPYLIGSFHFCHVCNSCCKAHLQ*FPITLA Trigger: AGCAAGGGTGATGGGAAAGCATTGTAAATGTGCTTT...ACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATAAGGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR GCA 90 bp | TATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTGGCTCAGGGGAAAATCCAAATTaGTCTAAGGTAGTAATCTGT | + |
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Preference number: 2 (lower is better) Translates to: YLIGSFHFCHVCNSCCGSGENPN*SKVVIC Trigger: ACAGATTACTACCTTAGAGCAATTTGGATTTTCCCC...TGAGCCACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCCTTGCATTTCTTTGGAGTCTATTCAACTGCTGTGGTTTTACTTAGAAGTCTGCTCAGGAAATCTATaGATAGCTCTTGCAAAAATA | + |
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Preference number: 2 (lower is better) Translates to: VPCISLESIQLLWFYLEVCSGNL*IALAKI Trigger: TATTTTTGCAAGAGCTATGCATAGATTTCCTGAGCA...GACTTCTAAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR TCA 72 bp | CGAGAACCACAGTGCCCGGAATGGCACAGACTGAAGTaGTCCTGGATAGTGAAGCGTCAGGGCGGCCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: REPQCPEWHRLK*SWIVKRQGGLP Trigger: GGGAAGGCCGCCCTGACGCTTCACTATCCAGGATCACTTCAGTCTGTGCCATTCCGGGCACTGTGGTTCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR GCA 72 bp | GGCCTTCCCTTAGCGCATGCGCCCCTGATGCTGGTGTaGTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: GLPLAHAPLMLV*SEKEARSMCFQ Trigger: CTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAGGGGCGCATGCGCTAAGGGAAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR CAA 90 bp | AGAACCACAGTGCCCGGAATGGCACAGACTGAAGTGATCCTGGATAGTGAAGCGCCTGGGGCCCTTACATaGCTGGCAGCGTCCCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: RTTVPGMAQTEVILDSEAPGALT*LAASLA Trigger: TGCAAGGGACGCTGCCAGCAATGTAAGGGCCCCAGG...CGCTTCACTATCCAGGATCACTTCAGTCTGTGCCATTCCGGGCACTGTGGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR TCA 72 bp | TCCCTTAGCGCATGCGCCCCTGATGCTGGTGTGCTCTaGGAAGGAAGCTCGATCCATGTGCTTCCAGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: SLSACAPDAGVL*EGSSIHVLPEN Trigger: ATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAGGGGCGCATGCGCTAAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR CCA 72 bp | CCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTaGCACCTGGGGCCCTTACATTGCTGGCAGCGTCCC | + |
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Preference number: 3 (lower is better) Translates to: PLLCFCSTYSHN*HLGPLHCWQRP Trigger: GGGACGCTGCCAGCAATGTAAGGGCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR CCA 72 bp | GTGAACAGCTCTTCTCGAGGCGAGCTGACAGTAGCCTaGTTGGTTTGTATGCTTGGACCTGGGTTTCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: VNSSSRGELTVA*LVCMLGPGFLA Trigger: GGCTAGAAACCCAGGTCCAAGCATACAAACCAACCAGGCTACTGTCAGCTCGCCTCGAGAAGAGCTGTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR GCA 72 bp | GGCACCTGGGGCCCTTACATTGCTGGCAGCGTCCCTTaGATTTCTTTGGAGTCTATTCAACTGCTGTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: GTWGPYIAGSVP*ISLESIQLLWF Trigger: AAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGACGCTGCCAGCAATGTAAGGGCCCCAGGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR CAA 90 bp | AGAACCACAGTGCCCGGAATGGCACAGACTGAAGTGATCCTGGATAGTGAAGCGTGCTGGCAGCGTCCCTaGCATTTCTTTGGAGTCTAT | + |
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Preference number: 3 (lower is better) Translates to: RTTVPGMAQTEVILDSEACWQRP*HFFGVY Trigger: ATAGACTCCAAAGAAATGCAAGGGACGCTGCCAGCA...CGCTTCACTATCCAGGATCACTTCAGTCTGTGCCATTCCGGGCACTGTGGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| 3UTR-3UTR CAA 90 bp | CTGATGCTGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGAGTAGCCTGGTTGGTTaGTATGCTTGGACCTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LMLVCSEKEARSMCFQRMSSLVG*YAWTWV Trigger: AACCCAGGTCCAAGCATACAAACCAACCAGGCTACT...CATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR GCA 72 bp | ACCTATAGCCATAACTGGCACCTGGGGCCCTTACATTaGTGGCAGCGTCCCTTGCATTTCTTTGGAGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: TYSHNWHLGPLH*WQRPLHFFGVY Trigger: ATAGACTCCAAAGAAATGCAAGGGACGCTGCCAGCAATGTAAGGGCCCCAGGTGCCAGTTATGGCTATAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR GCA 72 bp | ATGCTGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTaGTTCCAGAGAATGCATATGTCCCTCAGAGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: MLVCSEKEARSM*FQRMHMSLRDR Trigger: CCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR CCA 72 bp | TGTGTTTTTGTAGCACCTATAGCCATAACTGGCACCTaGGGCCCTTACATTGCTGGCAGCGTCCCTTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: CVFVAPIAITGT*GPYIAGSVPCI Trigger: AATGCAAGGGACGCTGCCAGCAATGTAAGGGCCCCAGGTGCCAGTTATGGCTATAGGTGCTACAAAAACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR GCA 72 bp | TTGTATGCTTGGACCTGGGTTTCTAGCCATACTCCCTaGTCCCTCTTCTCTTGTTGCTGCCCTAATGACATC | + |
|
Preference number: 3 (lower is better) Translates to: LYAWTWVSSHTP*SLFSCCCPNDI Trigger: GATGTCATTAGGGCAGCAACAAGAGAAGAGGGAGCAGGGAGTATGGCTAGAAACCCAGGTCCAAGCATACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR CCA 72 bp | TATAGCCATAACTGGCACCTGGGGCCCTTACATTGCTaGCAGCGTCCCTTGCATTTCTTTGGAGTCTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: YSHNWHLGPLHC*QRPLHFFGVYS Trigger: TGAATAGACTCCAAAGAAATGCAAGGGACGCTGCCAGCAATGTAAGGGCCCCAGGTGCCAGTTATGGCTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR GCA 72 bp | AGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTaGAGGTGGATACTGCTGCACATGGTGAAAGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RNMSPLSLDLEL*RWILLHMVKVL Trigger: CAGCACTTTCACCATGTGCAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR GCA 72 bp | CTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATaGATATGTCCCTCAGAGACAGGTCTATGTCCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LRRKLDPCASRE*ICPSETGLCPL Trigger: TAAGGGACATAGACCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTGCAGGTGGATACTGCTGACTTACCAGCAGTGCTaGCAATGGAAGAATAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: RNMSPLSLDLELCRWILLTYQQC*QWKNRT Trigger: AGTCCTATTCTTCCATTGCAAGCACTGCTGGTAAGT...CAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR CCA 72 bp | ATGTCACCTCTGTCCCTTGATCTAGAACTTTGCAGGTaGATACTGCTGCACATGGTGAAAGTGCTGTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: MSPLSLDLELCR*ILLHMVKVLYS Trigger: AGAATACAGCACTTTCACCATGTGCAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCCTTATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTCTGACAGTAGCCTGGTaGGTTTGTATGCTTGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: HPYLIGSFHFCHVCNSCCLTVAW*VCMLGP Trigger: AGGTCCAAGCATACAAACCAACCAGGCTACTGTCAG...ACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATAAGGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTGGCTCAGCTTTCCCATCACCCTaGCTGTGTTTTTGTAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: YLIGSFHFCHVCNSCCGSAFPSP*LCFCST Trigger: GGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGC...TGAGCCACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTGCAGGTGGATACTGCTGCAATGCGGTGTAAGTTaGATTCAAGACATAACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RNMSPLSLDLELCRWILLQCGVS*IQDITH Trigger: ATGGGTTATGTCTTGAATCAAACTTACACCGCATTG...CAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTCGATCCATGTGCTTCCAGAGAATGCATATGTCCCTCAGAGACAGGTCTAATAATGGGGTTTAGATaGATGAATTCACAACGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: KLDPCASRECICPSETGLIMGFR*MNSQRV Trigger: TACCCGTTGTGAATTCATCAATCTAAACCCCATTAT...TAGACCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCCTTATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTGTCCCTTGCATTTCTTaGGAGTCTATTCAACTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HPYLIGSFHFCHVCNSCCVPCIS*ESIQLL Trigger: CAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGAC...ACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATAAGGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR GCA 72 bp | CCTTATTTGATAGGTAGTTTCCATTTCTGCCACGTTTaGAATTCATGCTGTGGCTCACCTGTCCAGAATAAT | + |
|
Preference number: 3 (lower is better) Translates to: PYLIGSFHFCHV*NSCCGSPVQNN Trigger: ATTATTCTGGACAGGTGAGCCACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR GCA 72 bp | GCTGATAGTGTTCTGTCCCATGCTGTGAGCCTCACATaGTCCCCTAGATTAAATTATATTATGAATTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: ADSVLSHAVSLT*SPRLNYIMNSI Trigger: TATGGAATTCATAATATAATTTAATCTAGGGGAGCATGTGAGGCTCACAGCATGGGACAGAACACTATCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR TCA 72 bp | GACGTTACTAGCTCTTGTGCTTTTCAAACTTACTCTTaGGTTCACTTAGAACTTCCGCATCAGGTTCTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: DVTSSCAFQTYS*VHLELPHQVLN Trigger: ATTAAGAACCTGATGCGGAAGTTCTAAGTGAACTCAAGAGTAAGTTTGAAAAGCACAAGAGCTAGTAACGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR TCA 72 bp | CAGTCTTGGATGTCTAACAAGTTAAACAAGAACCTTTaGACAAATGTGTCCATATGTCAATGCGGTGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: QSWMSNKLNKNL*TNVSICQCGVS Trigger: ACTTACACCGCATTGACATATGGACACATTTGTTCAAAGGTTCTTGTTTAACTTGTTAGACATCCAAGACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | AGAACCACAGTGCCCGGAATGGCACAGACTGAAGTGATCCTGGATAGTGAAGCGTGCTTCCATCAGAGGTaGAGTGAGGTTCTGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTTVPGMAQTEVILDSEACFHQR*SEVLRA Trigger: GGCCCGCAGAACCTCACTTCACCTCTGATGGAAGCA...CGCTTCACTATCCAGGATCACTTCAGTCTGTGCCATTCCGGGCACTGTGGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR CAA 72 bp | CTCTTCTCGAGGCGAGCTGACAGTAGCCTGGTTGGTTaGTATGCTTGGACCTGGGTTTCTAGCCATACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFSRRADSSLVG*YAWTWVSSHTP Trigger: GGGAGTATGGCTAGAAACCCAGGTCCAAGCATACAAACCAACCAGGCTACTGTCAGCTCGCCTCGAGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | GAAAACTGTGCCAGTCTGGCAGTGAACAGCTCTTCTCGAGGCGAGCTGACAGTACTTATGACCTTCTGGTaGCCATGTGATCCACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ENCASLAVNSSSRGELTVLMTFW*PCDPLC Trigger: ACACAGTGGATCACATGGTCACCAGAAGGTCATAAG...TACTGTCAGCTCGCCTCGAGAAGAGCTGTTCACTGCCAGACTGGCACAGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTCGATCCATGTGCTTCCAGAGAATGCATATGTCCCTCAGAGACAGGTCTACAGCTATTCCGCACTTaGACACGCCACTTCCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: KLDPCASRECICPSETGLQLFRT*TRHFPI Trigger: GATCGGGAAGTGGCGTGTTCAAGTGCGGAATAGCTG...TAGACCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR GCA 90 bp | AGAACCACAGTGCCCGGAATGGCACAGACTGAAGTGATCCTGGATAGTGAAGCGGGCATCTGGACATCCTaGAGCATTCTATCCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTTVPGMAQTEVILDSEAGIWTS*SILSKA Trigger: TGCTTTGGATAGAATGCTGCAGGATGTCCAGATGCC...CGCTTCACTATCCAGGATCACTTCAGTCTGTGCCATTCCGGGCACTGTGGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CCA 90 bp | CTGATGCTGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGCACAGCTCCTGCCTTTaGGTATGGAATCCACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LMLVCSEKEARSMCFQRMHSSCL*VWNPHC Trigger: ACAGTGTGGATTCCATACCCAAAGGCAGGAGCTGTG...CATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR CAA 72 bp | AACAGCTCTTCTCGAGGCGAGCTGACAGTAGCCTGGTaGGTTTGTATGCTTGGACCTGGGTTTCTAGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: NSSSRGELTVAW*VCMLGPGFLAI Trigger: TATGGCTAGAAACCCAGGTCCAAGCATACAAACCAACCAGGCTACTGTCAGCTCGCCTCGAGAAGAGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | CTGATGCTGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGAGCCGCACTAGAGGATaGGCTGAGAGAGTCTATATT | + |
|
Preference number: 4 (lower is better) Translates to: LMLVCSEKEARSMCFQRMSRTRG*AERVYI Trigger: AATATAGACTCTCTCAGCTCATCCTCTAGTGCGGCT...CATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CCA 90 bp | CTGATGCTGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGGTTGTCTTCTGGAATTaGGAGACCCATGTAACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LMLVCSEKEARSMCFQRMVVFWN*ETHVTL Trigger: GAGCGTTACATGGGTCTCCCAATTCCAGAAGACAAC...CATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAGAAAACTGTGCCAGTCTGGCAGTGAACAGCTCTTCTCGAGGCGAGCTGTCAAGGTTGTCTTCTaGAATTGGGAGACCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLRKLCQSGSEQLFSRRAVKVVF*NWETHV Trigger: TACATGGGTCTCCCAATTCCAGAAGACAACCTTGAC...AGCTCGCCTCGAGAAGAGCTGTTCACTGCCAGACTGGCACAGTTTTCTGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | CGAGCTGACAGTAGCCTGGTTGGTTTGTATGCTTGGACCTGGGTTTCTAGCCATGAGGTATTCAAAGTCTaGAACCCACCACAAAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RADSSLVGLYAWTWVSSHEVFKV*NPPQRV Trigger: TACTCTTTGTGGTGGGTTTCAGACTTTGAATACCTC...ATGGCTAGAAACCCAGGTCCAAGCATACAAACCAACCAGGCTACTGTCAGCTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | GAAAACTGTGCCAGTCTGGCAGTGAACAGCTCTTCTCGAGGCGAGCTGACAGTATCAGGTGACACTGAATaGTATCCAAAGCTTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ENCASLAVNSSSRGELTVSGDTE*YPKLSK Trigger: CTTTGAAAGCTTTGGATATCATTCAGTGTCACCTGA...TACTGTCAGCTCGCCTCGAGAAGAGCTGTTCACTGCCAGACTGGCACAGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | CTGATGCTGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGCTGGCTGCTTCAATTTaGTCTTCAACTTCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LMLVCSEKEARSMCFQRMLAASI*SSTSSV Trigger: AACACTGGAAGTTGAAGATCAAATTGAAGCAGCCAG...CATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR GCA 90 bp | AGAACCACAGTGCCCGGAATGGCACAGACTGAAGTGATCCTGGATAGTGAAGCGATTCTTCCAGACATATaGCAACTTATGACCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTTVPGMAQTEVILDSEAILPDI*QLMTFW Trigger: CCAGAAGGTCATAAGTTGGCATATGTCTGGAAGAAT...CGCTTCACTATCCAGGATCACTTCAGTCTGTGCCATTCCGGGCACTGTGGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTCGATCCATGTGCTTCCAGAGAATGCATATGTCCCTCAGAGACAGGTCTAATCCGTGTACCACATTaGTTGGAAATCCACACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLDPCASRECICPSETGLIRVPH*LEIHTS Trigger: GCTGGTGTGGATTTCCAAGCAATGTGGTACACGGAT...TAGACCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR GCA 90 bp | AGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTGCAGGTGGATACTGCTGTGTAAGGAGAAGCACTaGTGGAGGAAATGGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RNMSPLSLDLELCRWILLCKEKH*WRKWLM Trigger: CATGAGCCATTTCCTCCAGCAGTGCTTCTCCTTACA...CAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCTTGCATTTCTTTGGAGTCTATTCAACTGCTGTGGTTTTACTTAGAAGTCGCAGGAGCAGGGATTTaGATGGGAGCCGCACTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPCISLESIQLLWFYLEVAGAGI*MGAALE Trigger: CTCTAGTGCGGCTCCCATCCAAATCCCTGCTCCTGC...GACTTCTAAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTCGATCCATGTGCTTCCAGAGAATGCATATGTCCCTCAGAGACAGGTCTAAGTTCTGAATCCTCCTaGGCCACTGTAGTGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: KLDPCASRECICPSETGLSSESS*ATVVKF Trigger: GAATTTCACTACAGTGGCTCAGGAGGATTCAGAACT...TAGACCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTCGATCCATGTGCTTCCAGAGAATGCATATGTCCCTCAGAGACAGGTCTATCATCTGCCGTTCCATaGATAAGGAGGTACTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: KLDPCASRECICPSETGLSSAVP*IRRYST Trigger: AGTTGAGTACCTCCTTATTCATGGAACGGCAGATGA...TAGACCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR GCA 90 bp | AGAACCACAGTGCCCGGAATGGCACAGACTGAAGTGATCCTGGATAGTGAAGCGCAATCTTCTGTTGATTaGATGCATGATCTTATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTTVPGMAQTEVILDSEAQSSVD*MHDLIS Trigger: GGAGATAAGATCATGCATGCAATCAACAGAAGATTG...CGCTTCACTATCCAGGATCACTTCAGTCTGTGCCATTCCGGGCACTGTGGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | ACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTAGAAGGAGTATTCAATaGGCGGCACTCCTGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TMLSHHPCCVFVAPIAITRRSIQ*AALLCR Trigger: ACGACACAGGAGTGCCGCTCATTGAATACTCCTTCT...AGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | TATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTGGCTCACCATCAGAGGTGAAGTaGGGTTCTGCGGGCCTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YLIGSFHFCHVCNSCCGSPSEVK*GSAGLN Trigger: ATTTAGGCCCGCAGAACCTCACTTCACCTCTGATGG...TGAGCCACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | ACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTCGATCCCAGGACCATTaGGGTTACATACCCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TMLSHHPCCVFVAPIAITRSQDH*GYIPSI Trigger: TATGGAGGGTATGTAACCTCAATGGTCCTGGGATCG...AGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTTGCATTTCTTTGGAGTCTATTCAACTGCTGTGGTTTTACTTAGAAGTCCCCTCTTGCCACAGATaGAGGAGCAGGGATTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VPCISLESIQLLWFYLEVPSCHR*RSRDLD Trigger: ATCCAAATCCCTGCTCCTGCATCTGTGGCAAGAGGG...GACTTCTAAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR GCA 90 bp | CGAGCTGACAGTAGCCTGGTTGGTTTGTATGCTTGGACCTGGGTTTCTAGCCATTACAAATTGCCTGGCTaGTTCAATTTGATCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RADSSLVGLYAWTWVSSHYKLPG*FNLIFN Trigger: GTTGAAGATCAAATTGAAGCAGCCAGGCAATTTGTA...ATGGCTAGAAACCCAGGTCCAAGCATACAAACCAACCAGGCTACTGTCAGCTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTCAGAAAACTGTGCCAGTCTGGCAGTGAACAGCTCTTCTCGAGGCGAGCTAAATTGCAACTCGCTTaGTATCCACAAATCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: FLRKLCQSGSEQLFSRRAKLQLA*YPQIPF Trigger: AAATGGGATTTGTGGATAGCAAGCGAGTTGCAATTT...AGCTCGCCTCGAGAAGAGCTGTTCACTGCCAGACTGGCACAGTTTTCTGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CCA 90 bp | CTGATGCTGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGATACTGACATCTTTCTaGATTCAGGTCACAACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LMLVCSEKEARSMCFQRMILTSF*IQVTTK Trigger: CTTAGTTGTGACCTGAATCCAGAAAGATGTCAGTAT...CATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| 3UTR CAA 72 bp | GGCCCTTACATTGCTGGCAGCGTCCCTTGCATTTCTTaGGAGTCTATTCAACTGCTGTGGTTTTACTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GPYIAGSVPCIS*ESIQLLWFYLE Trigger: TTCTAAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGACGCTGCCAGCAATGTAAGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | AGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTGCAGGTGGATACTGCTGTTCCATGTTCAGCATTaGGCAGCAAGATATTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNMSPLSLDLELCRWILLFHVQH*AARYCS Trigger: AGAACAATATCTTGCTGCTCAATGCTGAACATGGAA...CAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR GCA 90 bp | ACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTCTCATTTCAACATGCTaGTGCTCGGATGGACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TMLSHHPCCVFVAPIAITLISTC*CSDGQF Trigger: GAACTGTCCATCCGAGCAGCAGCATGTTGAAATGAG...AGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTGCAGGTGGATACTGCTGTGTTCTCCAAGAAAATaGAGCTGTTTCCATGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNMSPLSLDLELCRWILLCSPRK*SCFHVQ Trigger: CTGAACATGGAAACAGCTCCATTTTCTTGGAGAACA...CAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTCGATCCATGTGCTTCCAGAGAATGCATATGTCCCTCAGAGACAGGTCTAAAAGAACTTTACAGTTaGATTCACAGCTCCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLDPCASRECICPSETGLKELYS*IHSSCL Trigger: AAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTT...TAGACCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCTTGCATTTCTTTGGAGTCTATTCAACTGCTGTGGTTTTACTTAGAAGTCAAGGAGAAGCACTGCTaGAGGAAATGGCTCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPCISLESIQLLWFYLEVKEKHC*RKWLMW Trigger: CCACATGAGCCATTTCCTCCAGCAGTGCTTCTCCTT...GACTTCTAAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCTTGCATTTCTTTGGAGTCTATTCAACTGCTGTGGTTTTACTTAGAAGTCCTTGGGGTACTGCAGTaGCTCATCAGAATAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPCISLESIQLLWFYLEVLGVLQ*LIRIEG Trigger: TCCTTCTATTCTGATGAGTCACTGCAGTACCCCAAG...GACTTCTAAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | TATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTGGCTCAACTCGCAGCTCTTTATaGTCCGTGCTACGATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLIGSFHFCHVCNSCCGSTRSSL*SVLRCR Trigger: TCTACATCGTAGCACGGATCATAAAGAGCTGCGAGT...TGAGCCACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCTTGCATTTCTTTGGAGTCTATTCAACTGCTGTGGTTTTACTTAGAAGTCTGGCCCAGTTCAGTCTaGAGGAAGCATCTGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VPCISLESIQLLWFYLEVWPSSV*RKHLLF Trigger: AAAAAGCAGATGCTTCCTTCAGACTGAACTGGGCCA...GACTTCTAAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCTTGCATTTCTTTGGAGTCTATTCAACTGCTGTGGTTTTACTTAGAAGTCGAATCCACACTGTCTTaGGGTACTGCAGTGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPCISLESIQLLWFYLEVESTLS*GTAVTH Trigger: ATGAGTCACTGCAGTACCCCAAGACAGTGTGGATTC...GACTTCTAAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CCA 90 bp | TATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTGGCTCATTCCGACCCAGCCTGTaGTACTCATTTCAACATGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLIGSFHFCHVCNSCCGSFRPSL*YSFQHA Trigger: AGCATGTTGAAATGAGTACCACAGGCTGGGTCGGAA...TGAGCCACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CCA 90 bp | CACCCTTATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTGTGTACCACATTGCTTaGAAATCCACACCAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HPYLIGSFHFCHVCNSCCVYHIA*KSTPAS Trigger: GGATGCTGGTGTGGATTTCCAAGCAATGTGGTACAC...ACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATAAGGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCTTGCATTTCTTTGGAGTCTATTCAACTGCTGTGGTTTTACTTAGAAGTCGAAGCATCTGCTTTTTaGCTACAGGGACCTGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: VPCISLESIQLLWFYLEVEASAF*LQGPAY Trigger: ATATGCAGGTCCCTGTAGTCAAAAAGCAGATGCTTC...GACTTCTAAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR GCA 90 bp | ACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTGATGTTTTCTGTACTTaGAAGGTAAGTGGCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TMLSHHPCCVFVAPIAITDVFCT*KVSGPV Trigger: AACTGGGCCACTTACCTTGCAAGTACAGAAAACATC...AGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTGCAGGTGGATACTGCTGCCACTGTGTATTATTTaGAATCTTCTCTTCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RNMSPLSLDLELCRWILLPLCII*NLLFCD Trigger: ATCACAGAAGAGAAGATTCCAAATAATACACAGTGG...CAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR GCA 90 bp | ACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTCTTCTGTTGATTGCATaGATGATCTTATCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TMLSHHPCCVFVAPIAITLLLIA*MILSPW Trigger: CCAAGGAGATAAGATCATGCATGCAATCAACAGAAG...AGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | CACCCTTATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTAGTTCCACGTTAGGTTaGTCTTATCATAGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPYLIGSFHFCHVCNSCCSSTLG*SYHSHR Trigger: TCTGTGACTATGATAAGATCAACCTAACGTGGAACT...ACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATAAGGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR TCA 90 bp | CACCCTTATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTGGGGGCAAGATCATTTaGTACCAAAATCTTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HPYLIGSFHFCHVCNSCCGGKII*YQNLVS Trigger: TGAAACAAGATTTTGGTATCAAATGATCTTGCCCCC...ACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATAAGGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS CCA 90 bp | TCTGCGGCTGTCAGCTGCCGCTTCATCTTTGCTCAGCAGAACTATTaGCACGGTGATGATGGTGACAAGCGCAGCGACACCAAGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAAVSCRFIFAQQNY*HGDDGDKRSDTKQS Trigger: GGACTGCTTGGTGTCGCTGCGCTTGTCACCATCATCACCGTGCCAATAGTTCTGCTGAGCAAAGATGAAGCGGCAGCTGACAGCCGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS TCA 90 bp | CATAGTACTCCCACCGTGACACAGGTGCCACAGCTATTCCGCACTTaGACACGCCACTTCCCGATCCCAGGACCATTGAGGTTACATACC | + |
|
Preference number: 5 (lower is better) Translates to: HSTPTVTQVPQLFRT*TRHFPIPGPLRLHT Trigger: GGTATGTAACCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGCGGAATAGCTGTGGCACCTGTGTCACGGTGGGAGTACTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | AGAACCACAGTGCCCGGAATGGCACAGACTGAAGTGATCCTGGATAGTGAAGCGGGAATCCACACTGTCTaGGGGTACTGCAGTGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTTVPGMAQTEVILDSEAGIHTV*GYCSDS Trigger: TGAGTCACTGCAGTACCCCAAGACAGTGTGGATTCC...CGCTTCACTATCCAGGATCACTTCAGTCTGTGCCATTCCGGGCACTGTGGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | GAAAACTGTGCCAGTCTGGCAGTGAACAGCTCTTCTCGAGGCGAGCTGACAGTAATGACCAGCCCCAAATaGCAACTCGCTTGCTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: ENCASLAVNSSSRGELTVMTSPK*QLACYP Trigger: TGGATAGCAAGCGAGTTGCAATTTGGGGCTGGTCAT...TACTGTCAGCTCGCCTCGAGAAGAGCTGTTCACTGCCAGACTGGCACAGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS GCA 90 bp | GCGGGCCTAAATCTTCCGACCCAGCCTGTGGTACTCATTTCAACATaGTGCTGCTCGGATGGACAGTTCCACGTTAGGTTGATCTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: AGLNLPTQPVVLIST*CCSDGQFHVRLILS Trigger: TGATAAGATCAACCTAACGTGGAACTGTCCATCCGAGCAGCAGCATGTTGAAATGAGTACCACAGGCTGGGTCGGAAGATTTAGGCCCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | CGAGCTGACAGTAGCCTGGTTGGTTTGTATGCTTGGACCTGGGTTTCTAGCCATCTAGAAACGTGTTGTTaGGAGACCACCACAGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RADSSLVGLYAWTWVSSHLETCC*ETTTVQ Trigger: CTGCACTGTGGTGGTCTCCAAACAACACGTTTCTAG...ATGGCTAGAAACCCAGGTCCAAGCATACAAACCAACCAGGCTACTGTCAGCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | CTGATGCTGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGCGTGTACCACATTGCTaGGAAATCCACACCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LMLVCSEKEARSMCFQRMRVPHC*EIHTSI Trigger: GATGCTGGTGTGGATTTCCAAGCAATGTGGTACACG...CATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTCGATCCATGTGCTTCCAGAGAATGCATATGTCCCTCAGAGACAGGTCTAACAGCTATTCCGCACTaGAACACGCCACTTCCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: KLDPCASRECICPSETGLTAIPH*NTPLPD Trigger: ATCGGGAAGTGGCGTGTTCAAGTGCGGAATAGCTGT...TAGACCTGTCTCTGAGGGACATATGCATTCTCTGGAAGCACATGGATCGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS TCA 90 bp | TCCTGCCTTTGGGTATGGAATCCACACTGTCTTGGGGTACTGCAGTaGCTCATCAGAATAGAAGGAGTATTCAATGAGCGGCACTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SCLWVWNPHCLGVLQ*LIRIEGVFNERHSC Trigger: ACAGGAGTGCCGCTCATTGAATACTCCTTCTATTCTGATGAGTCACTGCAGTACCCCAAGACAGTGTGGATTCCATACCCAAAGGCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS GCA 90 bp | GATGATCTTATAGAAGCTGCTTCCATCAGAGGTGAAGTGAGGTTCTaGGGGCCTAAATCTTCCGACCCAGCCTGTGGTACTCATTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: DDLIEAASIRGEVRF*GPKSSDPACGTHFN Trigger: GTTGAAATGAGTACCACAGGCTGGGTCGGAAGATTTAGGCCCGCAGAACCTCACTTCACCTCTGATGGAAGCAGCTTCTATAAGATCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | AGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTGCAGGTGGATACTGCTGCTATCCAAAGCAGAATaGTCTTCCAGGACTCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RNMSPLSLDLELCRWILLLSKAE*SSRTRS Trigger: GCTGCGAGTCCTGGAAGACAATTCTGCTTTGGATAG...CAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS-3UTR CAA 90 bp | GAAAACTGTGCCAGTCTGGCAGTGAACAGCTCTTCTCGAGGCGAGCTGACAGTACAAATTGCAACTCGCTaGCTATCCACAAATCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: ENCASLAVNSSSRGELTVQIATR*LSTNPI Trigger: AATGGGATTTGTGGATAGCAAGCGAGTTGCAATTTG...TACTGTCAGCTCGCCTCGAGAAGAGCTGTTCACTGCCAGACTGGCACAGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | AGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTGCAGGTGGATACTGCTGGGTTGTCTTCTGGAATaGGGAGACCCATGTAACGCT | + |
|
Preference number: 5 (lower is better) Translates to: RNMSPLSLDLELCRWILLGCLLE*GDPCNA Trigger: AGCGTTACATGGGTCTCCCAATTCCAGAAGACAACC...CAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | AGGAACATGTCACCTCTGTCCCTTGATCTAGAACTTTGCAGGTGGATACTGCTGCATGATCTTATCTCCTaGGTAACCACTTCCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RNMSPLSLDLELCRWILLHDLIS*VTTSSA Trigger: GGCAGAGGAAGTGGTTACCAAGGAGATAAGATCATG...CAGCAGTATCCACCTGCAAAGTTCTAGATCAAGGGACAGAGGTGACATGTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | CTGATGCTGGTGTGCTCTGAGAAGGAAGCTCGATCCATGTGCTTCCAGAGAATGAGGGGGCAAGATCATTaGATACCAAAATCTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LMLVCSEKEARSMCFQRMRGQDH*IPKSCF Trigger: GAAACAAGATTTTGGTATCAAATGATCTTGCCCCCT...CATTCTCTGGAAGCACATGGATCGAGCTTCCTTCTCAGAGCACACCAGCATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | ACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTCCGATCCCAGGACCATaGAGGTTACATACCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TMLSHHPCCVFVAPIAITPIPGP*RLHTLH Trigger: ATGGAGGGTATGTAACCTCAATGGTCCTGGGATCGG...AGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | TATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTGGCTCATCACAGCTCCTGCCTTaGGGTATGGAATCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: YLIGSFHFCHVCNSCCGSSQLLP*GMESTL Trigger: CAGTGTGGATTCCATACCCAAAGGCAGGAGCTGTGA...TGAGCCACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS TCA 90 bp | GGGGCCCCAACATCCCAGCTGATAGTACTTTGCCTCTTTACTAAATaGTACCGCATAATACTGACATCTTTCTGGATTCAGGTCACAACT | + |
|
Preference number: 5 (lower is better) Translates to: GAPTSQLIVLCLFTK*YRIILTSFWIQVTT Trigger: AGTTGTGACCTGAATCCAGAAAGATGTCAGTATTATGCGGTATCATTTAGTAAAGAGGCAAAGTACTATCAGCTGGGATGTTGGGGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS GCA 90 bp | AGGTTACATACCCTCCATATGACCAGCCCCAAATTGCAACTCGCTTaGTATCCACAAATCCCATTTTTACAAATTGCCTGGCTGCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RLHTLHMTSPKLQLA*YPQIPFLQIAWLLQ Trigger: TTGAAGCAGCCAGGCAATTTGTAAAAATGGGATTTGTGGATAGCAAGCGAGTTGCAATTTGGGGCTGGTCATATGGAGGGTATGTAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCTTGCATTTCTTTGGAGTCTATTCAACTGCTGTGGTTTTACTTAGAAGTCGGAAGCATCTGCTTTTaGACTACAGGGACCTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: VPCISLESIQLLWFYLEVGSICF*TTGTCI Trigger: TATGCAGGTCCCTGTAGTCAAAAAGCAGATGCTTCC...GACTTCTAAGTAAAACCACAGCAGTTGAATAGACTCCAAAGAAATGCAAGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS GCA 90 bp | TTCAATTTGATCTTCAACTTCCAGTGTTCCCAATCTTCTGTTGATTaGATGCATGATCTTATCTCCTTGGTAACCACTTCCTCTGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: FNLIFNFQCSQSSVD*MHDLISLVTTSSAV Trigger: GACGGCAGAGGAAGTGGTTACCAAGGAGATAAGATCATGCATGCAATCAACAGAAGATTGGGAACACTGGAAGTTGAAGATCAAATTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | CACCCTTATTTGATAGGTAGTTTCCATTTCTGCCACGTTTGCAATTCATGCTGTCCTGGCTGCTTCAATTaGATCTTCAACTTCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HPYLIGSFHFCHVCNSCCPGCFN*IFNFQC Trigger: ACACTGGAAGTTGAAGATCAAATTGAAGCAGCCAGG...ACAGCATGAATTGCAAACGTGGCAGAAATGGAAACTACCTATCAAATAAGGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS-3UTR CAA 90 bp | ACAATGCTTTCCCATCACCCTTGCTGTGTTTTTGTAGCACCTATAGCCATAACTGTTCCCAATCTTCTGTaGATTGCATGCATGATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TMLSHHPCCVFVAPIAITVPNLL*IACMIL Trigger: TAAGATCATGCATGCAATCAACAGAAGATTGGGAAC...AGTTATGGCTATAGGTGCTACAAAAACACAGCAAGGGTGATGGGAAAGCATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS TCA 90 bp | AGGTACTGTTCTCCAAGAAAATGGAGCTGTTTCCATGTTCAGCATTaGGCAGCAAGATATTGTTCTCTTGTTTGTAGAGGTATTCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RYCSPRKWSCFHVQH*AARYCSLVCRGIQS Trigger: ACTTTGAATACCTCTACAAACAAGAGAACAATATCTTGCTGCTCAATGCTGAACATGGAAACAGCTCCATTTTCTTGGAGAACAGTACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS TCA 72 bp | CCCACCGTGACACAGGTGCCACAGCTATTCCGCACTTaGACACGCCACTTCCCGATCCCAGGACCATTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PTVTQVPQLFRT*TRHFPIPGPLR Trigger: CCTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGCGGAATAGCTGTGGCACCTGTGTCACGGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS CAA 72 bp | TCCCACCGTGACACAGGTGCCACAGCTATTCCGCACTaGAACACGCCACTTCCCGATCCCAGGACCATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SHRDTGATAIPH*NTPLPDPRTIE Trigger: CTCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGCGGAATAGCTGTGGCACCTGTGTCACGGTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS CCA 72 bp | GTCAGCTGCCGCTTCATCTTTGCTCAGCAGAACTATTaGCACGGTGATGATGGTGACAAGCGCAGCGACACC | + |
|
Preference number: 6 (lower is better) Translates to: VSCRFIFAQQNY*HGDDGDKRSDT Trigger: GGTGTCGCTGCGCTTGTCACCATCATCACCGTGCCAATAGTTCTGCTGAGCAAAGATGAAGCGGCAGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS GCA 72 bp | AATTGTCTTCCAGGACTCGCAGCTCTTTATGATCCGTaGTACGATGTAGAGTGTAGAGGGGCAGACCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NCLPGLAALYDP*YDVECRGADRG Trigger: GCCCCGGTCTGCCCCTCTACACTCTACATCGTAGCACGGATCATAAAGAGCTGCGAGTCCTGGAAGACAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS GCA 72 bp | CTTCCGACCCAGCCTGTGGTACTCATTTCAACATGCTaGTGCTCGGATGGACAGTTCCACGTTAGGTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LPTQPVVLISTC*CSDGQFHVRLI Trigger: GATCAACCTAACGTGGAACTGTCCATCCGAGCAGCAGCATGTTGAAATGAGTACCACAGGCTGGGTCGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
||
| CDS GCA 72 bp | ATAGAAGCTGCTTCCATCAGAGGTGAAGTGAGGTTCTaGGGGCCTAAATCTTCCGACCCAGCCTGTGGTACT | + |
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Preference number: 6 (lower is better) Translates to: IEAASIRGEVRF*GPKSSDPACGT Trigger: AGTACCACAGGCTGGGTCGGAAGATTTAGGCCCGCAGAACCTCACTTCACCTCTGATGGAAGCAGCTTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS CAA 72 bp | GAATACGTTCTGCGGCTGTCAGCTGCCGCTTCATCTTaGCTCAGCAGAACTATTGGCACGGTGATGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: EYVLRLSAAASS*LSRTIGTVMMV Trigger: CACCATCATCACCGTGCCAATAGTTCTGCTGAGCAAAGATGAAGCGGCAGCTGACAGCCGCAGAACGTATTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS CAA 90 bp | TCAGCTAGTGAATACGTTCTGCGGCTGTCAGCTGCCGCTTCATCTTaGCTCAGCAGAACTATTGGCACGGTGATGATGGTGACAAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: SASEYVLRLSAAASS*LSRTIGTVMMVTSA Trigger: TGCGCTTGTCACCATCATCACCGTGCCAATAGTTCTGCTGAGCAAAGATGAAGCGGCAGCTGACAGCCGCAGAACGTATTCACTAGCTGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS GCA 72 bp | CCGACCCAGCCTGTGGTACTCATTTCAACATGCTGCTaGTCGGATGGACAGTTCCACGTTAGGTTGATCTTA | + |
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Preference number: 6 (lower is better) Translates to: PTQPVVLISTCC*SDGQFHVRLIL Trigger: TAAGATCAACCTAACGTGGAACTGTCCATCCGAGCAGCAGCATGTTGAAATGAGTACCACAGGCTGGGTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS GCA 72 bp | AATCTTCCGACCCAGCCTGTGGTACTCATTTCAACATaGTGCTGCTCGGATGGACAGTTCCACGTTAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: NLPTQPVVLIST*CCSDGQFHVRL Trigger: CAACCTAACGTGGAACTGTCCATCCGAGCAGCAGCATGTTGAAATGAGTACCACAGGCTGGGTCGGAAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS CCA 72 bp | CAGCTCCTGCCTTTGGGTATGGAATCCACACTGTCTTaGGGTACTGCAGTGACTCATCAGAATAGAAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: QLLPLGMESTLS*GTAVTHQNRRS Trigger: ACTCCTTCTATTCTGATGAGTCACTGCAGTACCCCAAGACAGTGTGGATTCCATACCCAAAGGCAGGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS GCA 72 bp | GCCGTCAAAGCTAGCTACTATGATGTTTTCTGTACTTaGAAGGTAAGTGGCCCAGTTCAGTCTGAAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: AVKASYYDVFCT*KVSGPVQSEGS Trigger: GCTTCCTTCAGACTGAACTGGGCCACTTACCTTGCAAGTACAGAAAACATCATAGTAGCTAGCTTTGACGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS CAA 90 bp | GAGGTTACATACCCTCCATATGACCAGCCCCAAATTGCAACTCGCTaGCTATCCACAAATCCCATTTTTACAAATTGCCTGGCTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: EVTYPPYDQPQIATR*LSTNPIFTNCLAAS Trigger: TGAAGCAGCCAGGCAATTTGTAAAAATGGGATTTGTGGATAGCAAGCGAGTTGCAATTTGGGGCTGGTCATATGGAGGGTATGTAACCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS GCA 72 bp | ACCCTCCATATGACCAGCCCCAAATTGCAACTCGCTTaGTATCCACAAATCCCATTTTTACAAATTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: TLHMTSPKLQLA*YPQIPFLQIAW Trigger: CCAGGCAATTTGTAAAAATGGGATTTGTGGATAGCAAGCGAGTTGCAATTTGGGGCTGGTCATATGGAGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS CAA 72 bp | TTGAGTTCCTGTAATGGTCAAGGTTGTCTTCTGGAATaGGGAGACCCATGTAACGCTCTGTGTACACTGAGT | + |
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Preference number: 6 (lower is better) Translates to: LSSCNGQGCLLE*GDPCNALCTLS Trigger: ACTCAGTGTACACAGAGCGTTACATGGGTCTCCCAATTCCAGAAGACAACCTTGACCATTACAGGAACTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS TCA 72 bp | GTGGCCCAGTTCAGTCTGAAGGAAGCATCTGCTTTTTaGCTACAGGGACCTGCATATACATCTAATAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: VAQFSLKEASAF*LQGPAYTSNSR Trigger: TCTACTATTAGATGTATATGCAGGTCCCTGTAGTCAAAAAGCAGATGCTTCCTTCAGACTGAACTGGGCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS CAA 72 bp | TACCCTCCATATGACCAGCCCCAAATTGCAACTCGCTaGCTATCCACAAATCCCATTTTTACAAATTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: YPPYDQPQIATR*LSTNPIFTNCL Trigger: CAGGCAATTTGTAAAAATGGGATTTGTGGATAGCAAGCGAGTTGCAATTTGGGGCTGGTCATATGGAGGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS TCA 72 bp | TCCAAGAGAACAAACAGTCGGTCAGGTGACACTGAATaGTATCCAAAGCTTTCAAAGGTACTGTTCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SKRTNSRSGDTE*YPKLSKVLFSK Trigger: CTTGGAGAACAGTACCTTTGAAAGCTTTGGATATCATTCAGTGTCACCTGACCGACTGTTTGTTCTCTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS GCA 72 bp | TACAATAAAGAACTTTACAGTTGGATTCACAGCTCCTaGCTTTGGGTATGGAATCCACACTGTCTTGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: YNKELYSWIHSS*LWVWNPHCLGV Trigger: TACCCCAAGACAGTGTGGATTCCATACCCAAAGGCAGGAGCTGTGAATCCAACTGTAAAGTTCTTTATTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS TCA 72 bp | ATTCAAAGTCTGAAACCCACCACAAAGAGTAGGACTTaGCCCGAAAGGTACTCTTTAAATAGTCAGCTAGTG | + |
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Preference number: 6 (lower is better) Translates to: IQSLKPTTKSRT*PERYSLNSQLV Trigger: CACTAGCTGACTATTTAAAGAGTACCTTTCGGGTCAAGTCCTACTCTTTGTGGTGGGTTTCAGACTTTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS GCA 72 bp | ATCTTCAACTTCCAGTGTTCCCAATCTTCTGTTGATTaGATGCATGATCTTATCTCCTTGGTAACCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: IFNFQCSQSSVD*MHDLISLVTTS Trigger: GGAAGTGGTTACCAAGGAGATAAGATCATGCATGCAATCAACAGAAGATTGGGAACACTGGAAGTTGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS TCA 72 bp | TCTCCAAGAAAATGGAGCTGTTTCCATGTTCAGCATTaGGCAGCAAGATATTGTTCTCTTGTTTGTAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: SPRKWSCFHVQH*AARYCSLVCRG Trigger: ACCTCTACAAACAAGAGAACAATATCTTGCTGCTCAATGCTGAACATGGAAACAGCTCCATTTTCTTGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS TCA 72 bp | ACATCCCAGCTGATAGTACTTTGCCTCTTTACTAAATaGTACCGCATAATACTGACATCTTTCTGGATTCAG | + |
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Preference number: 6 (lower is better) Translates to: TSQLIVLCLFTK*YRIILTSFWIQ Trigger: CTGAATCCAGAAAGATGTCAGTATTATGCGGTATCATTTAGTAAAGAGGCAAAGTACTATCAGCTGGGATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS TCA 72 bp | AATCCCATTTTTACAAATTGCCTGGCTGCTTCAATTTaGTCTTCAACTTCCAGTGTTCCCAATCTTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: NPIFTNCLAASI*SSTSSVPNLLL Trigger: CAACAGAAGATTGGGAACACTGGAAGTTGAAGATCAAATTGAAGCAGCCAGGCAATTTGTAAAAATGGGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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| CDS CAA 72 bp | AAATCCCATTTTTACAAATTGCCTGGCTGCTTCAATTaGATCTTCAACTTCCAGTGTTCCCAATCTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: KSHFYKLPGCFN*IFNFQCSQSSV Trigger: AACAGAAGATTGGGAACACTGGAAGTTGAAGATCAAATTGAAGCAGCCAGGCAATTTGTAAAAATGGGATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047812.8 |
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