Pregenerated sensors for DPP10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036815Ensembl transcript IDs: ENSMUST00000112603.4, ENSMUST00000112606.8, ENSMUST00000239072.2
Found 389 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TGGAGCATGTGTCCTTCTTACCAGTTGGGACATCTTCTGGATATATaGCCAGGAGAGGTATTGCGGGATCCTCCGGTAGTACTAGCTGAG | + |
Preference number: 1 (lower is better) Translates to: WSMCPSYQLGHLLDI*PGEVLRDPPVVLAE Trigger: CTCAGCTAGTACTACCGGAGGATCCCGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACTGGTAAGAAGGACACATGCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | TATATGCCCAGGAGAGGTATTGCGGGATCCTCCGGTAGTACTAGCTaGGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGAT | + |
Preference number: 1 (lower is better) Translates to: YMPRRGIAGSSGSTS*DKRMDHLETAISRD Trigger: ATCCCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTAGTACTACCGGAGGATCCCGCAATACCTCTCCTGGGCATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | CTACTGCTAGCGGGAGAGACAGATGCCGTGTCATGCGCATGTCTCTaGGAGTGTAAATTGAGGTCTGGATTCCAGAAGAATGACAGGAAC | + |
Preference number: 1 (lower is better) Translates to: LLLAGETDAVSCACL*ECKLRSGFQKNDRN Trigger: GTTCCTGTCATTCTTCTGGAATCCAGACCTCAATTTACACTCTCAGAGACATGCGCATGACACGGCATCTGTCTCTCCCGCTAGCAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | CGTGTGCAGAAGGATCCTGTTACAGCTTCATTCTTCCTGGCCAGTTaGGCGCGCAATAGGCAATGGCTTGAATCATTCTCCTATGGTATC | + |
Preference number: 1 (lower is better) Translates to: RVQKDPVTASFFLAS*ARNRQWLESFSYGI Trigger: GATACCATAGGAGAATGATTCAAGCCATTGCCTATTGCGCGCTCAACTGGCCAGGAAGAATGAAGCTGTAACAGGATCCTTCTGCACACG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | AAATTGAGGTCTGGATTCCAGAAGAATGACAGGAACCATGAGAGCTaGCATGCCTTGGGTTTTAGACCCCTCATGACCTCAGAGGGCTCT | + |
Preference number: 1 (lower is better) Translates to: KLRSGFQKNDRNHES*HALGFRPLMTSEGS Trigger: AGAGCCCTCTGAGGTCATGAGGGGTCTAAAACCCAAGGCATGTCAGCTCTCATGGTTCCTGTCATTCTTCTGGAATCCAGACCTCAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | GAGAGACAGATGCCGTGTCATGCGCATGTCTCTGAGAGTGTAAATTaGGGTCTGGATTCCAGAAGAATGACAGGAACCATGAGAGCTGAC | + |
Preference number: 1 (lower is better) Translates to: ERQMPCHAHVSESVN*GLDSRRMTGTMRAD Trigger: GTCAGCTCTCATGGTTCCTGTCATTCTTCTGGAATCCAGACCTCAATTTACACTCTCAGAGACATGCGCATGACACGGCATCTGTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CCA 90 bp | GAGGTGGGACCTTGCTTGAAGAAGTACAGCAGTAGTGGGCAGATTTaGGGATTTATAACCTGGCCTCTCTCTGCTTGTTCTCTCTCTGTT | + |
Preference number: 1 (lower is better) Translates to: EVGPCLKKYSSSGQI*GFITWPLSACSLSV Trigger: AACAGAGAGAGAACAAGCAGAGAGAGGCCAGGTTATAAATCCCCAAATCTGCCCACTACTGCTGTACTTCTTCAAGCAAGGTCCCACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CCA 90 bp | CCCACTGGGTTTGAGATAAAGTGCCTGCTCATTCTCCTTTGTGTATaGCATACTAACCAGTCCAGGAACTTCTGGGTTTTGCCAGTCTCC | + |
Preference number: 1 (lower is better) Translates to: PTGFEIKCLLILLCV*HTNQSRNFWVLPVS Trigger: GGAGACTGGCAAAACCCAGAAGTTCCTGGACTGGTTAGTATGCCATACACAAAGGAGAATGAGCAGGCACTTTATCTCAAACCCAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR GCA 90 bp | GTGGAGTGCAGGCCATTAATAAAACACCAGACTGTGGAACCAGGCTaGCATAAGAGAATTGTGAGAAGAATGGCCAGGAATCCCAGAGTA | + |
Preference number: 1 (lower is better) Translates to: VECRPLIKHQTVEPG*HKRIVRRMARNPRV Trigger: TACTCTGGGATTCCTGGCCATTCTTCTCACAATTCTCTTATGGCAGCCTGGTTCCACAGTCTGGTGTTTTATTAATGGCCTGCACTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTaGAGTGAGAAAGCCACAGGAGGCTGGCTAGCACTCACTGTGGCA | + |
Preference number: 1 (lower is better) Translates to: FCCMRTFQDQSTCKS*SEKATGGWLALTVA Trigger: TGCCACAGTGAGTGCTAGCCAGCCTCCTGTGGCTTTCTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CCA 90 bp | CCCTCAAGACAGTCTGCTGTGGGAATGAAGGGAGCTTTGGAATTTTaGAATTGTGGGGGCAGGTTTAGGCTCATAATACATAGGAGTAGC | + |
Preference number: 1 (lower is better) Translates to: PSRQSAVGMKGALEF*NCGGRFRLIIHRSS Trigger: GCTACTCCTATGTATTATGAGCCTAAACCTGCCCCCACAATTCCAAAATTCCAAAGCTCCCTTCATTCCCACAGCAGACTGTCTTGAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | TTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTaGGAAAGCCACAGGAGGCTGGCTAGCACTCACTGTGGCACTTAT | + |
Preference number: 1 (lower is better) Translates to: LYEDISRPINMQKLE*ESHRRLASTHCGTY Trigger: ATAAGTGCCACAGTGAGTGCTAGCCAGCCTCCTGTGGCTTTCTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | CAGATGTTGGGATGTAATGAGAATCACACTTGCTTGAAGTGCATATaGATGGGGAAGTCCTGTTACCTGTGCTTCCTTGCCAGGCCTTTT | + |
Preference number: 1 (lower is better) Translates to: QMLGCNENHTCLKCI*MGKSCYLCFLARPF Trigger: AAAAGGCCTGGCAAGGAAGCACAGGTAACAGGACTTCCCCATTCATATGCACTTCAAGCAAGTGTGATTCTCATTACATCCCAACATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | GCTGACCTGACCATACCTCAAAGCCACATGTTGGAAAGAGACATCTaGCAATTGTCCTCGGACCTCCATGTGAATTCATTAGAAGTAGCA | + |
Preference number: 1 (lower is better) Translates to: ADLTIPQSHMLERDI*QLSSDLHVNSLEVA Trigger: TGCTACTTCTAATGAATTCACATGGAGGTCCGAGGACAATTGTCAGATGTCTCTTTCCAACATGTGGCTTTGAGGTATGGTCAGGTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CCA 90 bp | TCTGGGTTTTGCCAGTCTCCACTTCCTATATCTGCACAGAAGCTCTaGGATTACAGAGATGTGCCACTGTGTCTAACTTTATGTAGGTTC | + |
Preference number: 1 (lower is better) Translates to: SGFCQSPLPISAQKL*DYRDVPLCLTLCRF Trigger: GAACCTACATAAAGTTAGACACAGTGGCACATCTCTGTAATCCCAGAGCTTCTGTGCAGATATAGGAAGTGGAGACTGGCAAAACCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR GCA 90 bp | ACTAATCTCTCAGAACTGCACACCTGTCAGCCTTTACTATTCTCCTaGAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAA | + |
Preference number: 1 (lower is better) Translates to: TNLSELHTCQPLLFS*RWCKRTPWKSAQRK Trigger: TTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATAGTAAAGGCTGACAGGTGTGCAGTTCTGAGAGATTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | ATCCTAAAGGACAGATGTTGGGATGTAATGAGAATCACACTTGCTTaGAGTGCATATGAATGGGGAAGTCCTGTTACCTGTGCTTCCTTG | + |
Preference number: 1 (lower is better) Translates to: ILKDRCWDVMRITLA*SAYEWGSPVTCASL Trigger: CAAGGAAGCACAGGTAACAGGACTTCCCCATTCATATGCACTTCAAGCAAGTGTGATTCTCATTACATCCCAACATCTGTCCTTTAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR GCA 90 bp | TACACTAGATATTGTTTCTTGAGTCCCACTGGGTTTGAGATAAAGTaGCTGCTCATTCTCCTTTGTGTATGGCATACTAACCAGTCCAGG | + |
Preference number: 1 (lower is better) Translates to: YTRYCFLSPTGFEIK*LLILLCVWHTNQSR Trigger: CCTGGACTGGTTAGTATGCCATACACAAAGGAGAATGAGCAGGCACTTTATCTCAAACCCAGTGGGACTCAAGAAACAATATCTAGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CCA 90 bp | AAGCTGCCCTTAGAATTCTGGAGCGTCTACAACAAGACAGTCTCTTaGTTCAGTTTCATTGAGCCTCAATATTCCCTTCAGCTCTGTATA | + |
Preference number: 1 (lower is better) Translates to: KLPLEFWSVYNKTVS*FSFIEPQYSLQLCI Trigger: TATACAGAGCTGAAGGGAATATTGAGGCTCAATGAAACTGAACCAAGAGACTGTCTTGTTGTAGACGCTCCAGAATTCTAAGGGCAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR CCA 90 bp | GGGGAACCTCAAACATTGATCTCTGAGAGGTTTGAATTGATTTGTTaGTGGAGAGGTCAGCCATTGGTTACAGTATTATTGCTCGATGGT | + |
Preference number: 1 (lower is better) Translates to: GEPQTLISERFELIC*WRGQPLVTVLLLDG Trigger: ACCATCGAGCAATAATACTGTAACCAATGGCTGACCTCTCCACCAACAAATCAATTCAAACCTCTCAGAGATCAATGTTTGAGGTTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR GCA 90 bp | GTAACTGGGTTTCAATGGTGGATTTGGACCTGCCTATATTTCCTGTaGCTAGATATCTTCTTTTCTCTTAGAGAATTCCCAAACCAGGAC | + |
Preference number: 1 (lower is better) Translates to: VTGFQWWIWTCLYFL*LDIFFSLREFPNQD Trigger: GTCCTGGTTTGGGAATTCTCTAAGAGAAAAGAAGATATCTAGGCACAGGAAATATAGGCAGGTCCAAATCCACCATTGAAACCCAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | CCATGTCCAAGTCTGGCAGCATCTCAACTGAGATACAGAGGCACATaGTGGGTTACAAGCATACAGCAAATCATCTTTTCTCAATTAATT | + |
Preference number: 1 (lower is better) Translates to: PCPSLAASQLRYRGT*WVTSIQQIIFSQLI Trigger: AATTAATTGAGAAAAGATGATTTGCTGTATGCTTGTAACCCATCATGTGCCTCTGTATCTCAGTTGAGATGCTGCCAGACTTGGACATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR GCA 90 bp | GGAAATAAATTACATTCACAGCAGCTTACACTAATCTCTCAGAACTaGACACCTGTCAGCCTTTACTATTCTCCTGCAGGTGGTGTAAAA | + |
Preference number: 1 (lower is better) Translates to: GNKLHSQQLTLISQN*TPVSLYYSPAGGVK Trigger: TTTTACACCACCTGCAGGAGAATAGTAAAGGCTGACAGGTGTGCAGTTCTGAGAGATTAGTGTAAGCTGCTGTGAATGTAATTTATTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | TTTAATGAGAATAACTGTGTGAACTGGAAGCCAAAGTTCATGTTTTaGACTGCATCCCCATCCTTTCACACCATAGAGAACAACCATCCT | + |
Preference number: 1 (lower is better) Translates to: FNENNCVNWKPKFMF*TASPSFHTIENNHP Trigger: AGGATGGTTGTTCTCTATGGTGTGAAAGGATGGGGATGCAGTTCAAAACATGAACTTTGGCTTCCAGTTCACACAGTTATTCTCATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CCA 90 bp | AGGAGAGATTTTTATGTTCACATGTTTCATCAACAAACATGCTTTTaGCTTAGAATGACTCTAGCAGTAGGGCTCCTAGAACCAAGGTTG | + |
Preference number: 1 (lower is better) Translates to: RRDFYVHMFHQQTCF*LRMTLAVGLLEPRL Trigger: CAACCTTGGTTCTAGGAGCCCTACTGCTAGAGTCATTCTAAGCCAAAAGCATGTTTGTTGATGAAACATGTGAACATAAAAATCTCTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | AAGGGAGATATAAACAAGGGAGATATAAACAAGAAGAAACAGGACTaGATAAACGTGTGCAGAAGGATCCTGTTACAGCTTCATTCTTCC | + |
Preference number: 1 (lower is better) Translates to: KGDINKGDINKKKQD*INVCRRILLQLHSS Trigger: GGAAGAATGAAGCTGTAACAGGATCCTTCTGCACACGTTTATTCAGTCCTGTTTCTTCTTGTTTATATCTCCCTTGTTTATATCTCCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | CACACACACACACACTCCTGCTTTGCTGTAGGTGCTCCACATACATaGATGTTCTTACAAAAACAACAAGAGAGTATAAATCAACTCAAA | + |
Preference number: 1 (lower is better) Translates to: HTHTHSCFAVGAPHT*MFLQKQQESINQLK Trigger: TTTGAGTTGATTTATACTCTCTTGTTGTTTTTGTAAGAACATTCATGTATGTGGAGCACCTACAGCAAAGCAGGAGTGTGTGTGTGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR GCA 90 bp | TTGCAAGACGTTGATTTGCATGACCCTTATTTACATGGCAGATGCTaGACAACTGGAAATAAATTACATTCACAGCAGCTTACACTAATC | + |
Preference number: 1 (lower is better) Translates to: LQDVDLHDPYLHGRC*TTGNKLHSQQLTLI Trigger: GATTAGTGTAAGCTGCTGTGAATGTAATTTATTTCCAGTTGTGCAGCATCTGCCATGTAAATAAGGGTCATGCAAATCAACGTCTTGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR GCA 90 bp | GATTTGCAAGACGTTGATTTGCATGACCCTTATTTACATGGCAGATaGTGCACAACTGGAAATAAATTACATTCACAGCAGCTTACACTA | + |
Preference number: 1 (lower is better) Translates to: DLQDVDLHDPYLHGR*CTTGNKLHSQQLTL Trigger: TAGTGTAAGCTGCTGTGAATGTAATTTATTTCCAGTTGTGCAGCATCTGCCATGTAAATAAGGGTCATGCAAATCAACGTCTTGCAAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CCA 90 bp | ACTATGAATCCTTTATACTTTGCTCAGACGTCTCAAGATCTCCTTTaGTATTCAGAGTCTTTTGTAGCTTCCCTTAACCTTCAAGTTTAT | + |
Preference number: 1 (lower is better) Translates to: TMNPLYFAQTSQDLL*YSESFVASLNLQVY Trigger: ATAAACTTGAAGGTTAAGGGAAGCTACAAAAGACTCTGAATACCAAAGGAGATCTTGAGACGTCTGAGCAAAGTATAAAGGATTCATAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | CAATGCCAAGAGCCATTAATAAGCTATTTCTTGGTCCTTATTTACTaGGTACGTAATGCTCTCAATGAGAGTAGGAAAAACAAATTTGCT | + |
Preference number: 1 (lower is better) Translates to: QCQEPLISYFLVLIY*VRNALNESRKNKFA Trigger: AGCAAATTTGTTTTTCCTACTCTCATTGAGAGCATTACGTACTCAGTAAATAAGGACCAAGAAATAGCTTATTAATGGCTCTTGGCATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 90 bp | AACAAGTTTCCAGAAGCAGCTAAGCACTTAACTAGACAAAGGAATTaGAGCTCCTTTGAATTTTATATTTGCTTACTAACAGTCAGGAGA | + |
Preference number: 1 (lower is better) Translates to: NKFPEAAKHLTRQRN*SSFEFYICLLTVRR Trigger: TCTCCTGACTGTTAGTAAGCAAATATAAAATTCAAAGGAGCTTCAATTCCTTTGTCTAGTTAAGTGCTTAGCTGCTTCTGGAAACTTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAACAGCCCACTCACTCCTaGTTCCTGGCCCTGGCATTC | + |
Preference number: 2 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKQPTHS*FLALAF Trigger: GAATGCCAGGGCCAGGAAGCAGGAGTGAGTGGGCTG...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAGGCAGCACAGTAGTGTaGATGTCTGTCTCCAAGGTC | + |
Preference number: 2 (lower is better) Translates to: GLSLTAIDALSRHGMLSRGSTVV*MSVSKV Trigger: GACCTTGGAGACAGACATCCACACTACTGTGCTGCC...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTGCAGGCATGGAATGCTaGGTAGACTCTGGGGAAAAA | + |
Preference number: 2 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAAGMEC*VDSGEK Trigger: TTTTTCCCCAGAGTCTACTCAGCATTCCATGCCTGC...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR TCA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAAATGCAAAAGCTGGAGTaGGAAAGCCACAGGAGGCTG | + |
Preference number: 2 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKMQKLE*ESHRRL Trigger: CAGCCTCCTGTGGCTTTCTCACTCCAGCTTTTGCAT...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTAGGTCTCAGCTGGCAGTaGTGTTTGGGGGTGAGGAGG | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLGLSWQ*CLGVRR Trigger: CCTCCTCACCCCCAAACAGCACTGCCAGCTGAGACC...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGAGCGGGAGAGACAGATaGCGTGTCATGCGCATGTCT | + |
Preference number: 2 (lower is better) Translates to: FCCMRTFQDQSTCKSWSESGRDR*RVMRMS Trigger: AGACATGCGCATGACACGGCATCTGTCTCTCCCGCT...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 90 bp | TGTGCAGGTGAACGGAGGACAGAAGACTACACTAGATATTGTTTCTaGAGTCCCACTGGGTTTGAGATAAAGTGCCTGCTCATTCTCCTT | + |
Preference number: 2 (lower is better) Translates to: CAGERRTEDYTRYCF*SPTGFEIKCLLILL Trigger: AAGGAGAATGAGCAGGCACTTTATCTCAAACCCAGTGGGACTCAAGAAACAATATCTAGTGTAGTCTTCTGTCCTCCGTTCACCTGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 90 bp | AGAGAATTGCCCTCAAGACAGTCTGCTGTGGGAATGAAGGGAGCTTaGGAATTTTGGAATTGTGGGGGCAGGTTTAGGCTCATAATACAT | + |
Preference number: 2 (lower is better) Translates to: RELPSRQSAVGMKGA*EFWNCGGRFRLIIH Trigger: ATGTATTATGAGCCTAAACCTGCCCCCACAATTCCAAAATTCCAAAGCTCCCTTCATTCCCACAGCAGACTGTCTTGAGGGCAATTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACACTACTGACAACTGCCTaGACTTTGGAAGGTGCTGAA | + |
Preference number: 2 (lower is better) Translates to: PSPPREQYATQWHCICLTLLTTA*TLEGAE Trigger: TTCAGCACCTTCCAAAGTTCAGGCAGTTGTCAGTAG...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGACTACTGACAACTGCCTaGACTTTGGAAGGTGCTGAA | + |
Preference number: 2 (lower is better) Translates to: GLSLTAIDALSRHGMLSRLLTTA*TLEGAE Trigger: TTCAGCACCTTCCAAAGTTCAGGCAGTTGTCAGTAG...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR TCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGGCAGGCATGGAATGCTaGGTAGACTCTGGGGAAAAA | + |
Preference number: 2 (lower is better) Translates to: FCCMRTFQDQSTCKSWSEAGMEC*VDSGEK Trigger: TTTTTCCCCAGAGTCTACTCAGCATTCCATGCCTGC...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAAAGAGGAATGTGCAACTaGGGTCACTGGGATTCAAGA | + |
Preference number: 2 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKRGMCN*GHWDSR Trigger: TCTTGAATCCCAGTGACCTCAGTTGCACATTCCTCT...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTCTATCTACTGACAACTaGCTGAACTTTGGAAGGTGC | + |
Preference number: 2 (lower is better) Translates to: VGFGTPCPVHLNAIPRIALSTDN*LNFGRC Trigger: GCACCTTCCAAAGTTCAGGCAGTTGTCAGTAGATAG...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR GCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAACCAAGAGAGCAATATaGCACTCAGTGGCATTGCAT | + |
Preference number: 2 (lower is better) Translates to: GLSLTAIDALSRHGMLSRTKRAI*HSVALH Trigger: ATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGT...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR GCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTACCAAGAGAGCAATATaGCACTCAGTGGCATTGCAT | + |
Preference number: 2 (lower is better) Translates to: VGFGTPCPVHLNAIPRIATKRAI*HSVALH Trigger: ATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR-3UTR CCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGCAGTCCAGGAACTTCTaGGTTTTGCCAGTCTCCACT | + |
Preference number: 2 (lower is better) Translates to: FCCMRTFQDQSTCKSWSEQSRNF*VLPVST Trigger: AGTGGAGACTGGCAAAACCCAGAAGTTCCTGGACTG...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR CAA 90 bp | ATTCTGATTCTGGTTCCCTCAGAAAGGTGCCTGAGATTTGGCAACTaGAACAAGTTTCCAGAAGCAGCTAAGCACTTAACTAGACAAAGG | + |
Preference number: 2 (lower is better) Translates to: ILILVPSERCLRFGN*NKFPEAAKHLTRQR Trigger: CCTTTGTCTAGTTAAGTGCTTAGCTGCTTCTGGAAACTTGTTCAAGTTGCCAAATCTCAGGCACCTTTCTGAGGGAACCAGAATCAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR TCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAAACTTCCCTTTACAATaGAACACCTTCTGCACCCTT | + |
Preference number: 2 (lower is better) Translates to: PSPPREQYATQWHCICLTNFPLQ*NTFCTL Trigger: AAGGGTGCAGAAGGTGTTTCATTGTAAAGGGAAGTT...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTAACTTCCCTTTACAATaGAACACCTTCTGCACCCTT | + |
Preference number: 2 (lower is better) Translates to: VGFGTPCPVHLNAIPRIANFPLQ*NTFCTL Trigger: AAGGGTGCAGAAGGTGTTTCATTGTAAAGGGAAGTT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAGGTGATCATGACCATTaGAATCAAAGTGAGGGTAAC | + |
Preference number: 2 (lower is better) Translates to: GLSLTAIDALSRHGMLSRGDHDH*NQSEGN Trigger: GTTACCCTCACTTTGATTTCAATGGTCATGATCACC...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTGGTGATCATGACCATTaGAATCAAAGTGAGGGTAAC | + |
Preference number: 2 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAGDHDH*NQSEGN Trigger: GTTACCCTCACTTTGATTTCAATGGTCATGATCACC...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR-3UTR TCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAGGTGATCATGACCATTaGAATCAAAGTGAGGGTAAC | + |
Preference number: 2 (lower is better) Translates to: PSPPREQYATQWHCICLTGDHDH*NQSEGN Trigger: GTTACCCTCACTTTGATTTCAATGGTCATGATCACC...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR TCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGCTACTGACAACTGCCTaGACTTTGGAAGGTGCTGAA | + |
Preference number: 2 (lower is better) Translates to: FCCMRTFQDQSTCKSWSELLTTA*TLEGAE Trigger: TTCAGCACCTTCCAAAGTTCAGGCAGTTGTCAGTAG...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR TCA 90 bp | GCCAGCTGTATCAGGAATCTTAAAATAAACCTTCCTTCCCTAAGTTGCATTTGGCTCTCTGCCCTCTCATaGCTGAAACTTCACACAGTT | + |
Preference number: 2 (lower is better) Translates to: ASCIRNLKINLPSLSCIWLSALS*LKLHTV Trigger: AACTGTGTGAAGTTTCAGTCATGAGAGGGCAGAGAG...CCAAATGCAACTTAGGGAAGGAAGGTTTATTTTAAGATTCCTGATACAGCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAAAGGAGAAGACACCTGTaGGCATTTCTTTTGTGTGAC | + |
Preference number: 2 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKRRRHL*AFLLCD Trigger: GTCACACAAAAGAAATGCTCACAGGTGTCTTCTCCT...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGCTAGCAAGCATTGGCTaGAAGGACCCTGATATAGCT | + |
Preference number: 2 (lower is better) Translates to: FCCMRTFQDQSTCKSWSELASIG*KDPDIA Trigger: AGCTATATCAGGGTCCTTTCAGCCAATGCTTGCTAG...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTCTCACTGTCTGCATATaGACACGTGCGTGTATATAT | + |
Preference number: 2 (lower is better) Translates to: VGFGTPCPVHLNAIPRIALTVCI*TRACIY Trigger: ATATATACACGCACGTGTGCATATGCAGACAGTGAG...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR GCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACACTCACTGTCTGCATATaGACACGTGCGTGTATATAT | + |
Preference number: 2 (lower is better) Translates to: PSPPREQYATQWHCICLTLTVCI*TRACIY Trigger: ATATATACACGCACGTGTGCATATGCAGACAGTGAG...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR GCA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAACCCCTTAAAAGTAGGTaGTTTGTCCACAGCTGGTAT | + |
Preference number: 2 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKPLKSR*FVHSWY Trigger: ATACCAGCTGTGGACAAAGCACCTACTTTTAAGGGG...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGACAACTGCCTGAACTTTaGAAGGTGCTGAAATCCATA | + |
Preference number: 2 (lower is better) Translates to: GLSLTAIDALSRHGMLSRQLPEL*KVLKSI Trigger: TATGGATTTCAGCACCTTCCAAAGTTCAGGCAGTTG...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR CCA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAACTGCATATGTATCACTaGAAAGAGAGGCCCATTGGA | + |
Preference number: 2 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKLHMYH*KERPIG Trigger: TCCAATGGGCCTCTCTTTCCAGTGATACATATGCAG...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 90 bp | CATGGAGGAAGCTTGGCATTGAAGTCTCAGGAAACCTTCAGAATTTaGAATATGCAGAAAAACATTGGGATGCATCTGAGGCAAGAGTGT | + |
Preference number: 2 (lower is better) Translates to: HGGSLALKSQETFRI*NMQKNIGMHLRQEC Trigger: ACACTCTTGCCTCAGATGCATCCCAATGTTTTTCTGCATATTCAAAATTCTGAAGGTTTCCTGAGACTTCAATGCCAAGCTTCCTCCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTTTGGTTCAGTTTCATTaGGCCTCAATATTCCCTTCA | + |
Preference number: 2 (lower is better) Translates to: VGFGTPCPVHLNAIPRIALVQFH*ASIFPS Trigger: TGAAGGGAATATTGAGGCTCAATGAAACTGAACCAA...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTAAGTATTCTATCTACTaGCAACTGCCTGAACTTTGG | + |
Preference number: 2 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAKYSIY*QLPELW Trigger: CCAAAGTTCAGGCAGTTGTCAGTAGATAGAATACTT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAAAGTATTCTATCTACTaGCAACTGCCTGAACTTTGG | + |
Preference number: 2 (lower is better) Translates to: GLSLTAIDALSRHGMLSRKYSIY*QLPELW Trigger: CCAAAGTTCAGGCAGTTGTCAGTAGATAGAATACTT...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAACTGCACTGAGAGTTTaGAGTAAAAGGTTTGAGTGT | + |
Preference number: 2 (lower is better) Translates to: GLSLTAIDALSRHGMLSRTALRV*SKRFEC Trigger: ACACTCAAACCTTTTACTTCAAACTCTCAGTGCAGT...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR TCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTAAGGTGGGACCTTGCTTaGAGAAGTACAGCAGTAGTG | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLRWDLA*RSTAVV Trigger: CACTACTGCTGTACTTCTTCAAGCAAGGTCCCACCT...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAAACAAGACAGTCTCTTaGTTCAGTTTCATTGAGCCT | + |
Preference number: 2 (lower is better) Translates to: GLSLTAIDALSRHGMLSRNKTVS*FSFIEP Trigger: AGGCTCAATGAAACTGAACCAAGAGACTGTCTTGTT...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR CCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAAACAAGACAGTCTCTTaGTTCAGTTTCATTGAGCCT | + |
Preference number: 2 (lower is better) Translates to: PSPPREQYATQWHCICLTNKTVS*FSFIEP Trigger: AGGCTCAATGAAACTGAACCAAGAGACTGTCTTGTT...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR CCA 90 bp | ACCATAGAGAACAACAGAGCAACAGAACCTCCTTTATGTAATTTGAAAGTGAAAGGCAGCACAGTAGTGTaGATGTCTGTCTCCAAGGTC | + |
Preference number: 2 (lower is better) Translates to: TIENNRATEPPLCNLKVKGSTVV*MSVSKV Trigger: GACCTTGGAGACAGACATCCACACTACTGTGCTGCC...TTTCACTTTCAAATTACATAAAGGAGGTTCTGTTGCTCTGTTGTTCTCTATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAGGGTCTCATCATATTTaGCTCAATAAAGAAGCATCC | + |
Preference number: 2 (lower is better) Translates to: GLSLTAIDALSRHGMLSRGSHHI*LNKEAS Trigger: GGATGCTTCTTTATTGAGCCAAATATGATGAGACCC...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR CCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGTGGGGATTTATAACCTaGCCTCTCTCTGCTTGTTCT | + |
Preference number: 2 (lower is better) Translates to: FCCMRTFQDQSTCKSWSEWGFIT*PLSACS Trigger: AGAACAAGCAGAGAGAGGCCAGGTTATAAATCCCCA...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAAACTGGGTTTCAATGGTaGATTTGGACCTGCCTATAT | + |
Preference number: 2 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKTGFQW*IWTCLY Trigger: ATATAGGCAGGTCCAAATCCACCATTGAAACCCAGT...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 90 bp | AGAACCAGCTTTCAAGTCCACACCTTAGAATCCCAGGCTGTGCAGTaGATAAAGCCTAGGGTGGCTGAAGAAATTCTTTACTTTAAAATT | + |
Preference number: 2 (lower is better) Translates to: RTSFQVHTLESQAVQ*IKPRVAEEILYFKI Trigger: AATTTTAAAGTAAAGAATTTCTTCAGCCACCCTAGGCTTTATCAACTGCACAGCCTGGGATTCTAAGGTGTGGACTTGAAAGCTGGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR TCA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAAATCTGTTATATGGACTaGAAACACACCCAACTTCAG | + |
Preference number: 2 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKICYMD*KHTQLQ Trigger: CTGAAGTTGGGTGTGTTTTCAGTCCATATAACAGAT...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTATGTGGAGTGGCCAAATaGGCCATGAGAAGTGTTGTA | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLCGVAK*AMRSVV Trigger: TACAACACTTCTCATGGCTCATTTGGCCACTCCACA...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTACGTTATGCACTTTATaGAAAGGTGATCATGACCAT | + |
Preference number: 2 (lower is better) Translates to: VGFGTPCPVHLNAIPRIATLCTL*KGDHDH Trigger: ATGGTCATGATCACCTTTGCATAAAGTGCATAACGT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR GCA 90 bp | GCCAGCTGTATCAGGAATCTTAAAATAAACCTTCCTTCCCTAAGTTGCATTTGGCTCACTGTCTGCATATaGACACGTGCGTGTATATAT | + |
Preference number: 2 (lower is better) Translates to: ASCIRNLKINLPSLSCIWLTVCI*TRACIY Trigger: ATATATACACGCACGTGTGCATATGCAGACAGTGAG...CCAAATGCAACTTAGGGAAGGAAGGTTTATTTTAAGATTCCTGATACAGCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGAAGCTATACCTTTCCTaGCAGCTGTATCAGGAATCT | + |
Preference number: 2 (lower is better) Translates to: FCCMRTFQDQSTCKSWSEKLYLS*QLYQES Trigger: AGATTCCTGATACAGCTGGCAGGAAAGGTATAGCTT...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAAGGCTGGAAGGAATTCTaGTTTCTCACACTAAACTTA | + |
Preference number: 2 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKGWKEF*FLTLNL Trigger: TAAGTTTAGTGTGAGAAAGCAGAATTCCTTCCAGCC...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 90 bp | GGAATTAAAAACAACACTGAAGTAAACAGGATCAGAAAAAGGAAGTaGGTTCCATGTCCAAGTCTGGCAGCATCTCAACTGAGATACAGA | + |
Preference number: 2 (lower is better) Translates to: GIKNNTEVNRIRKRK*VPCPSLAASQLRYR Trigger: TCTGTATCTCAGTTGAGATGCTGCCAGACTTGGACATGGAACCAACTTCCTTTTTCTGATCCTGTTTACTTCAGTGTTGTTTTTAATTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | GCCAGCTGTATCAGGAATCTTAAAATAAACCTTCCTTCCCTAAGTTGCATTTGGCTAATTGCTCCAAACTaGCACATTGTAGGATTTGGT | + |
Preference number: 2 (lower is better) Translates to: ASCIRNLKINLPSLSCIWLIAPN*HIVGFG Trigger: ACCAAATCCTACAATGTGTCAGTTTGGAGCAATTAG...CCAAATGCAACTTAGGGAAGGAAGGTTTATTTTAAGATTCCTGATACAGCTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTCCACTGGGATTTTTCTaGGCATCGGACTTTGGTTTC | + |
Preference number: 2 (lower is better) Translates to: HLFHSLTQLKEECCEFRTPLGFF*ASDFGF Trigger: GAAACCAAAGTCCGATGCTCAGAAAAATCCCAGTGG...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCAGGCCTAAATTCTCCTaGAGCTATACCTTTCCTGCC | + |
Preference number: 2 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPRPKFS*SYTFPA Trigger: GGCAGGAAAGGTATAGCTTCAGGAGAATTTAGGCCT...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTACTGGAGATCCAACATTaGCCCTTGACCTTTCAATGT | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLLEIQH*PLTFQC Trigger: ACATTGAAAGGTCAAGGGTCAATGTTGGATCTCCAG...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTATTAACATGTTAGATTaGAGCTCAGCCATCAAAGAT | + |
Preference number: 2 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAINMLD*SSAIKD Trigger: ATCTTTGATGGCTGAGCTGCAATCTAACATGTTAAT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR GCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAGCCACTCAGTGGCATTaGATTTGTTTAACAAAATTT | + |
Preference number: 2 (lower is better) Translates to: GLSLTAIDALSRHGMLSRATQWH*ICLTKF Trigger: AAATTTTGTTAAACAAATGCAATGCCACTGAGTGGC...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR-3UTR GCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTGCCACTCAGTGGCATTaGATTTGTTTAACAAAATTT | + |
Preference number: 2 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAATQWH*ICLTKF Trigger: AAATTTTGTTAAACAAATGCAATGCCACTGAGTGGC...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR-3UTR GCA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCGTCACCATAGCTCTCTaGCCTCTCATGACTGAAACT | + |
Preference number: 2 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPVTIAL*PLMTET Trigger: AGTTTCAGTCATGAGAGGGCAGAGAGCTATGGTGAC...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR GCA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAACATCTGGTGAGAAATTaGTCAAATAGTTCTCTACCT | + |
Preference number: 2 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKHLVRN*SNSSLP Trigger: AGGTAGAGAACTATTTGAGCAATTTCTCACCAGATG...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR GCA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTGACACAATAGCTACCTaGTGCTGGCTTCCAGTAACT | + |
Preference number: 2 (lower is better) Translates to: HLFHSLTQLKEECCEFRTDTIAT*CWLPVT Trigger: AGTTACTGGAAGCCAGCAGCAGGTAGCTATTGTGTC...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR GCA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCGTTCCCTCAGAAAGGTaGCTGAGATTTGGCAACTTG | + |
Preference number: 2 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPVPSER*LRFGNL Trigger: CAAGTTGCCAAATCTCAGGCACCTTTCTGAGGGAAC...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR CCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTATGCTGAGTAGACTCTaGGGAAAAATGAATTCTTAT | + |
Preference number: 2 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAMLSRL*GKMNSY Trigger: ATAAGAATTCATTTTTCCCCAGAGTCTACTCAGCAT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR-3UTR CCA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCTCTGCACAGAAGCTCTaGGATTACAGAGATGTGCCA | + |
Preference number: 2 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPSAQKL*DYRDVP Trigger: TGGCACATCTCTGTAATCCCAGAGCTTCTGTGCAGA...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR CAA 90 bp | GACAACCTTGAAGCTGAAGCTTTTATTTATCTGGGCAAAGGAATTTaGCACATTATTCTCCCTAAGGGCTCAAAATCCAATTACACCACA | + |
Preference number: 2 (lower is better) Translates to: DNLEAEAFIYLGKGI*HIILPKGSKSNYTT Trigger: TGTGGTGTAATTGGATTTTGAGCCCTTAGGGAGAATAATGTGCAAAATTCCTTTGCCCAGATAAATAAAAGCTTCAGCTTCAAGGTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTAAACTTCCCTTTACAATaGAACACCTTCTGCACCCTT | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLNFPLQ*NTFCTL Trigger: AAGGGTGCAGAAGGTGTTTCATTGTAAAGGGAAGTT...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR TCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGTTGGTCCTTATTTACTaGGTACGTAATGCTCTCAAT | + |
Preference number: 2 (lower is better) Translates to: FCCMRTFQDQSTCKSWSELVLIY*VRNALN Trigger: ATTGAGAGCATTACGTACTCAGTAAATAAGGACCAA...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR TCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGGGTGCTCCACATACATaGATGTTCTTACAAAAACAA | + |
Preference number: 2 (lower is better) Translates to: FCCMRTFQDQSTCKSWSEGAPHT*MFLQKQ Trigger: TTGTTTTTGTAAGAACATTCATGTATGTGGAGCACC...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR GCA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTTGCAATACCACGTATTaGTGTTTGTGTTCTGGGGGT | + |
Preference number: 2 (lower is better) Translates to: HLFHSLTQLKEECCEFRTCNTTY*CLCSGG Trigger: ACCCCCAGAACACAAACAGCAATACGTGGTATTGCA...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTAGGGTTTGAGATAAAGTaGCTGCTCATTCTCCTTTGT | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLGFEIK*LLILLC Trigger: ACAAAGGAGAATGAGCAGGCACTTTATCTCAAACCC...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTGCGCGCAATAGGCAATaGCTTGAATCATTCTCCTAT | + |
Preference number: 2 (lower is better) Translates to: HLFHSLTQLKEECCEFRTARNRQ*LESFSY Trigger: ATAGGAGAATGATTCAAGCCATTGCCTATTGCGCGC...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCTTCAGAGCTATGGGCTaGAAGGAATTCTGCTTTCTC | + |
Preference number: 2 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPFRAMG*KEFCFL Trigger: GAGAAAGCAGAATTCCTTCCAGCCCATAGCTCTGAA...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCATTGCTTCAGAGCTATaGGCTGGAAGGAATTCTGCT | + |
Preference number: 2 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPIASEL*AGRNSA Trigger: AGCAGAATTCCTTCCAGCCCATAGCTCTGAAGCAAT...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTAAAGGTGCCTGAGATTTaGCAACTTGAACAAGTTTCC | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLKVPEI*QLEQVS Trigger: GGAAACTTGTTCAAGTTGCCAAATCTCAGGCACCTT...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTATTGGTTCAGTTTCATTaGGCCTCAATATTCCCTTCA | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLLVQFH*ASIFPS Trigger: TGAAGGGAATATTGAGGCTCAATGAAACTGAACCAA...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR TCA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTTGCGTGGATGTGAACTaGGAGTATAAAAGAGTGAGA | + |
Preference number: 2 (lower is better) Translates to: HLFHSLTQLKEECCEFRTCVDVN*EYKRVR Trigger: TCTCACTCTTTTATACTCTCAGTTCACATCCACGCA...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCGTGAATACTGAAATCTaGGGCCATGTTGAGATTGCT | + |
Preference number: 2 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPVNTEI*GHVEIA Trigger: AGCAATCTCAACATGGCCTCAGATTTCAGTATTCAC...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCTTCGCTGAAGTGCAATaGAAGATAGAGAATTGCCCT | + |
Preference number: 2 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPFAEVQ*KIENCP Trigger: AGGGCAATTCTCTATCTTGCATTGCACTTCAGCGAA...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTAAACAAGACAGTCTCTTaGTTCAGTTTCATTGAGCCT | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLNKTVS*FSFIEP Trigger: AGGCTCAATGAAACTGAACCAAGAGACTGTCTTGTT...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | ACCATAGAGAACAACAGAGCAACAGAACCTCCTTTATGTAATTTGAAAGTGAAACAACTGCCTGAACTTTaGAAGGTGCTGAAATCCATA | + |
Preference number: 2 (lower is better) Translates to: TIENNRATEPPLCNLKVKQLPEL*KVLKSI Trigger: TATGGATTTCAGCACCTTCCAAAGTTCAGGCAGTTG...TTTCACTTTCAAATTACATAAAGGAGGTTCTGTTGCTCTGTTGTTCTCTATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | GCCAGCTGTATCAGGAATCTTAAAATAAACCTTCCTTCCCTAAGTTGCATTTGGATGCTGAGTAGACTCTaGGGAAAAATGAATTCTTAT | + |
Preference number: 2 (lower is better) Translates to: ASCIRNLKINLPSLSCIWMLSRL*GKMNSY Trigger: ATAAGAATTCATTTTTCCCCAGAGTCTACTCAGCAT...CCAAATGCAACTTAGGGAAGGAAGGTTTATTTTAAGATTCCTGATACAGCTGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTAAAAGTGTCCACACTTTaGTCTTCCTTCTTCTACAGT | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLKVSTL*SSFFYS Trigger: ACTGTAGAAGAAGGAAGACCAAAGTGTGGACACTTT...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTTTCACTATGAATACCTaGACTCTCCACAAGAGGAAC | + |
Preference number: 2 (lower is better) Translates to: HLFHSLTQLKEECCEFRTFTMNT*TLHKRN Trigger: GTTCCTCTTGTGGAGAGTCCAGGTATTCATAGTGAA...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTATTATGTGTTCCTTTCTaGGTTAATACTCCTGAAGAC | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLLCVPF*VNTPED Trigger: GTCTTCAGGAGTATTAACTCAGAAAGGAACACATAA...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR TCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTAAAAGCCATCATCTGGTaGGAAATTGCTCAAATAGTT | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLKAIIW*EIAQIV Trigger: AACTATTTGAGCAATTTCTCACCAGATGATGGCTTT...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTAACGTTATGCACTTTATaGAAAGGTGATCATGACCAT | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLTLCTL*KGDHDH Trigger: ATGGTCATGATCACCTTTGCATAAAGTGCATAACGT...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTAAATTTATCCTGGCAATaGCAAGAGCCATTAATAAGC | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLNLSWQ*QEPLIS Trigger: GCTTATTAATGGCTCTTGGCATTGCCAGGATAAATT...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTATGTGATAATTTATCCTaGCAATGCCAAGAGCCATTA | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLCDNLS*QCQEPL Trigger: TAATGGCTCTTGGCATTGCCAGGATAAATTATCACA...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTAACACTTAAGAAAGGCTaGTTGTTACAAGAGGAAAAG | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLTLKKG*LLQEEK Trigger: CTTTTCCTCTTGTAACAACCAGCCTTTCTTAAGTGT...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 90 bp | CCAGGGTTAGAGGGAGGATTATTATTCAAGAGAGGAGTATTATTATaGGGAGATATAAACAAGGGAGATATAAACAAGGGAGATATAAAC | + |
Preference number: 2 (lower is better) Translates to: PGLEGGLLFKRGVLL*GDINKGDINKGDIN Trigger: GTTTATATCTCCCTTGTTTATATCTCCCTTGTTTATATCTCCCAATAATAATACTCCTCTCTTGAATAATAATCCTCCCTCTAACCCTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTTCCTGTCCATTTAAATaGAATACCACGTATTGCTGT | + |
Preference number: 2 (lower is better) Translates to: HLFHSLTQLKEECCEFRTSCPFK*NTTYCC Trigger: ACAGCAATACGTGGTATTGCATTTAAATGGACAGGA...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCCCATTCTTCTATCTCTaGTTCAATTACCTGTCCTTA | + |
Preference number: 2 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPPFFYL*FNYLSL Trigger: TAAGGACAGGTAATTGAAGCAGAGATAGAAGAATGG...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTAAATAACTGTGTGAACTaGAAGCCAAAGTTCATGTTT | + |
Preference number: 2 (lower is better) Translates to: NNSFNILAKTTSLISALLNNCVN*KPKFMF Trigger: AAACATGAACTTTGGCTTCCAGTTCACACAGTTATT...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCATTAACATGTTAGATTaGAGCTCAGCCATCAAAGAT | + |
Preference number: 2 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPINMLD*SSAIKD Trigger: ATCTTTGATGGCTGAGCTGCAATCTAACATGTTAAT...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR GCA 90 bp | ACCATAGAGAACAACAGAGCAACAGAACCTCCTTTATGTAATTTGAAAGTGAAATTCTCAGTTACTAATTaGTCCAAACTGACACATTGT | + |
Preference number: 2 (lower is better) Translates to: TIENNRATEPPLCNLKVKFSVTN*SKLTHC Trigger: ACAATGTGTCAGTTTGGAGCAATTAGTAACTGAGAA...TTTCACTTTCAAATTACATAAAGGAGGTTCTGTTGCTCTGTTGTTCTCTATGGT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR-3UTR CCA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCTGCTTTGTCCACAGCTaGTATATAATTTTGAAAAGC | + |
Preference number: 2 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPCFVHS*YIILKS Trigger: GCTTTTCAAAATTATATACCAGCTGTGGACAAAGCA...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 72 bp | GTGAGGTGGTGTGGCCTGCTGTGCGTGGATGTGAACTaGGAGTATAAAAGAGTGAGAGGTCCAGGGTTAGAG | + |
Preference number: 3 (lower is better) Translates to: VRWCGLLCVDVN*EYKRVRGPGLE Trigger: CTCTAACCCTGGACCTCTCACTCTTTTATACTCTCAGTTCACATCCACGCACAGCAGGCCACACCACCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | ATGAGAGCTGACATGCCTTGGGTTTTAGACCCCTCATaGCCTCAGAGGGCTCTGGTAAGTGTGGATCCTCCA | + |
Preference number: 3 (lower is better) Translates to: MRADMPWVLDPS*PQRALVSVDPP Trigger: TGGAGGATCCACACTTACCAGAGCCCTCTGAGGTCATGAGGGGTCTAAAACCCAAGGCATGTCAGCTCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 72 bp | CCCCAGGAAACCAACCCTTGCAACTTCCCTTTACAATaGAACACCTTCTGCACCCTTGGCAGCACAGTAGTG | + |
Preference number: 3 (lower is better) Translates to: PQETNPCNFPLQ*NTFCTLGSTVV Trigger: CACTACTGTGCTGCCAAGGGTGCAGAAGGTGTTTCATTGTAAAGGGAAGTTGCAAGGGTTGGTTTCCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR CCA 72 bp | ACATGCAAAAGCTGGAGTGAGAAAGCCACAGGAGGCTaGCTAGCACTCACTGTGGCACTTATCTGTGAAACC | + |
Preference number: 3 (lower is better) Translates to: TCKSWSEKATGG*LALTVALICET Trigger: GGTTTCACAGATAAGTGCCACAGTGAGTGCTAGCCAGCCTCCTGTGGCTTTCTCACTCCAGCTTTTGCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 72 bp | AGGAGAGGTATTGCGGGATCCTCCGGTAGTACTAGCTaGGACAAAAGGATGGACCATCTAGAGACTGCCATA | + |
Preference number: 3 (lower is better) Translates to: RRGIAGSSGSTS*DKRMDHLETAI Trigger: TATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTAGTACTACCGGAGGATCCCGCAATACCTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | GCGGGAGAGACAGATGCCGTGTCATGCGCATGTCTCTaGGAGTGTAAATTGAGGTCTGGATTCCAGAAGAAT | + |
Preference number: 3 (lower is better) Translates to: AGETDAVSCACL*ECKLRSGFQKN Trigger: ATTCTTCTGGAATCCAGACCTCAATTTACACTCTCAGAGACATGCGCATGACACGGCATCTGTCTCTCCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR GCA 72 bp | TGTCCTTCTTACCAGTTGGGACATCTTCTGGATATATaGCCAGGAGAGGTATTGCGGGATCCTCCGGTAGTA | + |
Preference number: 3 (lower is better) Translates to: CPSYQLGHLLDI*PGEVLRDPPVV Trigger: TACTACCGGAGGATCCCGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACTGGTAAGAAGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CCA 72 bp | GTGTGCAGAAGGATCCTGTTACAGCTTCATTCTTCCTaGCCAGTTGAGCGCGCAATAGGCAATGGCTTGAAT | + |
Preference number: 3 (lower is better) Translates to: VCRRILLQLHSS*PVERAIGNGLN Trigger: ATTCAAGCCATTGCCTATTGCGCGCTCAACTGGCCAGGAAGAATGAAGCTGTAACAGGATCCTTCTGCACAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR TCA 72 bp | AAGGATCCTGTTACAGCTTCATTCTTCCTGGCCAGTTaGGCGCGCAATAGGCAATGGCTTGAATCATTCTCC | + |
Preference number: 3 (lower is better) Translates to: KDPVTASFFLAS*ARNRQWLESFS Trigger: GGAGAATGATTCAAGCCATTGCCTATTGCGCGCTCAACTGGCCAGGAAGAATGAAGCTGTAACAGGATCCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR GCA 72 bp | TCAGAACTGCACACCTGTCAGCCTTTACTATTCTCCTaGAGGTGGTGTAAAAGGACACCCTGGAAATCTGCA | + |
Preference number: 3 (lower is better) Translates to: SELHTCQPLLFS*RWCKRTPWKSA Trigger: TGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATAGTAAAGGCTGACAGGTGTGCAGTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR CCA 72 bp | CAACTTCCCTTTACAATGAAACACCTTCTGCACCCTTaGCAGCACAGTAGTGTGGATGTCTGTCTCCAAGGT | + |
Preference number: 3 (lower is better) Translates to: QLPFTMKHLLHP*QHSSVDVCLQG Trigger: ACCTTGGAGACAGACATCCACACTACTGTGCTGCCAAGGGTGCAGAAGGTGTTTCATTGTAAAGGGAAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR CCA 72 bp | ACCTGCTGCTGGCTTCCAGTAACTGGGTTTCAATGGTaGATTTGGACCTGCCTATATTTCCTGTGCCTAGAT | + |
Preference number: 3 (lower is better) Translates to: TCCWLPVTGFQW*IWTCLYFLCLD Trigger: ATCTAGGCACAGGAAATATAGGCAGGTCCAAATCCACCATTGAAACCCAGTTACTGGAAGCCAGCAGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR CCA 72 bp | ATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTaGAGTGAGAAAGCCACAGGAGGCTGGCTAGCACTC | + |
Preference number: 3 (lower is better) Translates to: MRTFQDQSTCKS*SEKATGGWLAL Trigger: GAGTGCTAGCCAGCCTCCTGTGGCTTTCTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | TTGCACCTGACTTCCTCATATAAGCCACAAACATCTTaGGAGCTGCGCAGGTGTACCAGGATACTGGTGAAT | + |
Preference number: 3 (lower is better) Translates to: LHLTSSYKPQTS*ELRRCTRILVN Trigger: ATTCACCAGTATCCTGGTACACCTGCGCAGCTCTCAAGATGTTTGTGGCTTATATGAGGAAGTCAGGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | ATAGAGAATTGCCCTCAAGACAGTCTGCTGTGGGAATaGAGGGAGCTTTGGAATTTTGGAATTGTGGGGGCA | + |
Preference number: 3 (lower is better) Translates to: IENCPQDSLLWE*RELWNFGIVGA Trigger: TGCCCCCACAATTCCAAAATTCCAAAGCTCCCTTCATTCCCACAGCAGACTGTCTTGAGGGCAATTCTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | AGTTGGTTCCATGTCCAAGTCTGGCAGCATCTCAACTaGGATACAGAGGCACATGATGGGTTACAAGCATAC | + |
Preference number: 3 (lower is better) Translates to: SWFHVQVWQHLN*DTEAHDGLQAY Trigger: GTATGCTTGTAACCCATCATGTGCCTCTGTATCTCAGTTGAGATGCTGCCAGACTTGGACATGGAACCAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | ACCAGACTGTGGAACCAGGCTGCCATAAGAGAATTGTaGGAAGAATGGCCAGGAATCCCAGAGTACAAACAA | + |
Preference number: 3 (lower is better) Translates to: TRLWNQAAIREL*EEWPGIPEYKQ Trigger: TTGTTTGTACTCTGGGATTCCTGGCCATTCTTCTCACAATTCTCTTATGGCAGCCTGGTTCCACAGTCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR GCA 72 bp | TGGCTAGCACTCACTGTGGCACTTATCTGTGAAACCTaGTCTAGAAACACCTACCTTGAACTCTCTTGTGAC | + |
Preference number: 3 (lower is better) Translates to: WLALTVALICET*SRNTYLELSCD Trigger: GTCACAAGAGAGTTCAAGGTAGGTGTTTCTAGAGCAGGTTTCACAGATAAGTGCCACAGTGAGTGCTAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR GCA 72 bp | CATATGAATGGGGAAGTCCTGTTACCTGTGCTTCCTTaGCAGGCCTTTTCTTTCCCATTGGTATACTCCTTC | + |
Preference number: 3 (lower is better) Translates to: HMNGEVLLPVLP*QAFSFPLVYSF Trigger: GAAGGAGTATACCAATGGGAAAGAAAAGGCCTGGCAAGGAAGCACAGGTAACAGGACTTCCCCATTCATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR CAA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTACAGCAATAGATGCATaGAGCAGGCATGGAATGCTG | + |
Preference number: 3 (lower is better) Translates to: VGFGTPCPVHLNAIPRIATAIDA*SRHGML Trigger: CAGCATTCCATGCCTGCTCAATGCATCTATTGCTGT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR-3UTR CAA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAAGGAGGAAGCTTGGCATaGAAGTCTCAGGAAACCTTC | + |
Preference number: 3 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKGGSLA*KSQETF Trigger: GAAGGTTTCCTGAGACTTCAATGCCAAGCTTCCTCC...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | TTGCCTCCACACAACAGGCAAGGAACAGGGATAGTTTaGCCACCTGATGGGGTTGTGAAACTTTATGATTTC | + |
Preference number: 3 (lower is better) Translates to: LPPHNRQGTGIV*PPDGVVKLYDF Trigger: GAAATCATAAAGTTTCACAACCCCATCAGGTGGTCAAACTATCCCTGTTCCTTGCCTGTTGTGTGGAGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | GGATGTAATGAGAATCACACTTGCTTGAAGTGCATATaGATGGGGAAGTCCTGTTACCTGTGCTTCCTTGCC | + |
Preference number: 3 (lower is better) Translates to: GCNENHTCLKCI*MGKSCYLCFLA Trigger: GGCAAGGAAGCACAGGTAACAGGACTTCCCCATTCATATGCACTTCAAGCAAGTGTGATTCTCATTACATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR GCA 72 bp | TGTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATaGAATACCACGTATTGCTGTTTGTGTTCTGGGGGT | + |
Preference number: 3 (lower is better) Translates to: CRIWYPVSCPFK*NTTYCCLCSGG Trigger: ACCCCCAGAACACAAACAGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR GCA 72 bp | CAAATAGCCCACATTAGGAACCAAGGTGGGTTTCATTaGTTCAGAGCTATGGGCTGGAAGGAATTCTGCTTT | + |
Preference number: 3 (lower is better) Translates to: QIAHIRNQGGFH*FRAMGWKEFCF Trigger: AAAGCAGAATTCCTTCCAGCCCATAGCTCTGAAGCAATGAAACCCACCTTGGTTCCTAATGTGGGCTATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR CCA 72 bp | TGCTGGCTTCCAGTAACTGGGTTTCAATGGTGGATTTaGACCTGCCTATATTTCCTGTGCCTAGATATCTTC | + |
Preference number: 3 (lower is better) Translates to: CWLPVTGFQWWI*TCLYFLCLDIF Trigger: GAAGATATCTAGGCACAGGAAATATAGGCAGGTCCAAATCCACCATTGAAACCCAGTTACTGGAAGCCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR CCA 72 bp | AGACACAATAGCTACCTGCTGCTGGCTTCCAGTAACTaGGTTTCAATGGTGGATTTGGACCTGCCTATATTT | + |
Preference number: 3 (lower is better) Translates to: RHNSYLLLASSN*VSMVDLDLPIF Trigger: AAATATAGGCAGGTCCAAATCCACCATTGAAACCCAGTTACTGGAAGCCAGCAGCAGGTAGCTATTGTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR CAA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTAGCTGGCAGTGCTGTTaGGGGGTGAGGAGGATGGAA | + |
Preference number: 3 (lower is better) Translates to: HLFHSLTQLKEECCEFRTSWQCC*GVRRME Trigger: TTCCATCCTCCTCACCCCCAAACAGCACTGCCAGCT...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR CAA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAAGCTGCTGCCCTTTGTTaGTTTCCCTGTGGCATTAAT | + |
Preference number: 3 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKAAALC*FPCGIN Trigger: ATTAATGCCACAGGGAAACAAACAAAGGGCAGCAGC...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | ACAATGACACCATTGCATACACTAGCAAGCATTGGCTaGAAGGACCCTGATATAGCTGTCTCTTGTGAGACT | + |
Preference number: 3 (lower is better) Translates to: TMTPLHTLASIG*KDPDIAVSCET Trigger: AGTCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCCAATGCTTGCTAGTGTATGCAATGGTGTCATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR GCA 72 bp | TTACATTCACAGCAGCTTACACTAATCTCTCAGAACTaGACACCTGTCAGCCTTTACTATTCTCCTGCAGGT | + |
Preference number: 3 (lower is better) Translates to: LHSQQLTLISQN*TPVSLYYSPAG Trigger: ACCTGCAGGAGAATAGTAAAGGCTGACAGGTGTGCAGTTCTGAGAGATTAGTGTAAGCTGCTGTGAATGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR GCA 72 bp | AGGCCATTAATAAAACACCAGACTGTGGAACCAGGCTaGCATAAGAGAATTGTGAGAAGAATGGCCAGGAAT | + |
Preference number: 3 (lower is better) Translates to: RPLIKHQTVEPG*HKRIVRRMARN Trigger: ATTCCTGGCCATTCTTCTCACAATTCTCTTATGGCAGCCTGGTTCCACAGTCTGGTGTTTTATTAATGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR CAA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGACTTGGTTCAGTTTCATaGAGCCTCAATATTCCCTTC | + |
Preference number: 3 (lower is better) Translates to: GLSLTAIDALSRHGMLSRLGSVS*SLNIPF Trigger: GAAGGGAATATTGAGGCTCAATGAAACTGAACCAAG...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR-3UTR CAA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACACTTGGTTCAGTTTCATaGAGCCTCAATATTCCCTTC | + |
Preference number: 3 (lower is better) Translates to: PSPPREQYATQWHCICLTLGSVS*SLNIPF Trigger: GAAGGGAATATTGAGGCTCAATGAAACTGAACCAAG...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR-3UTR CAA 90 bp | ACCATAGAGAACAACAGAGCAACAGAACCTCCTTTATGTAATTTGAAAGTGAAAACCACGTATTGCTGTTaGTGTTCTGGGGGTGAGGGG | + |
Preference number: 3 (lower is better) Translates to: TIENNRATEPPLCNLKVKTTYCC*CSGGEG Trigger: CCCCTCACCCCCAGAACACAAACAGCAATACGTGGT...TTTCACTTTCAAATTACATAAAGGAGGTTCTGTTGCTCTGTTGTTCTCTATGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR CAA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGATGCAATACCACGTATaGCTGTTTGTGTTCTGGGGG | + |
Preference number: 3 (lower is better) Translates to: FCCMRTFQDQSTCKSWSEMQYHV*LFVFWG Trigger: CCCCCAGAACACAAACAGCAATACGTGGTATTGCAT...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR CAA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAAACCCCCTTTAGCTCATaGGGTATTTTCTCTAGCTTC | + |
Preference number: 3 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKTPFSS*GIFSSF Trigger: GAAGCTAGAGAAAATACCCAATGAGCTAAAGGGGGT...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | GACAGATGTTGGGATGTAATGAGAATCACACTTGCTTaGAGTGCATATGAATGGGGAAGTCCTGTTACCTGT | + |
Preference number: 3 (lower is better) Translates to: DRCWDVMRITLA*SAYEWGSPVTC Trigger: ACAGGTAACAGGACTTCCCCATTCATATGCACTTCAAGCAAGTGTGATTCTCATTACATCCCAACATCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | ACCATACCTCAAAGCCACATGTTGGAAAGAGACATCTaGCAATTGTCCTCGGACCTCCATGTGAATTCATTA | + |
Preference number: 3 (lower is better) Translates to: TIPQSHMLERDI*QLSSDLHVNSL Trigger: TAATGAATTCACATGGAGGTCCGAGGACAATTGTCAGATGTCTCTTTCCAACATGTGGCTTTGAGGTATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | AGTCTGGCAGCATCTCAACTGAGATACAGAGGCACATaGTGGGTTACAAGCATACAGCAAATCATCTTTTCT | + |
Preference number: 3 (lower is better) Translates to: SLAASQLRYRGT*WVTSIQQIIFS Trigger: AGAAAAGATGATTTGCTGTATGCTTGTAACCCATCATGTGCCTCTGTATCTCAGTTGAGATGCTGCCAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR CCA 72 bp | TTTGAGATAAAGTGCCTGCTCATTCTCCTTTGTGTATaGCATACTAACCAGTCCAGGAACTTCTGGGTTTTG | + |
Preference number: 3 (lower is better) Translates to: FEIKCLLILLCV*HTNQSRNFWVL Trigger: CAAAACCCAGAAGTTCCTGGACTGGTTAGTATGCCATACACAAAGGAGAATGAGCAGGCACTTTATCTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR CAA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTCTGGCCTCTCTCTGCTaGTTCTCTCTCTGTTTTCCC | + |
Preference number: 3 (lower is better) Translates to: HLFHSLTQLKEECCEFRTLASLC*FSLCFP Trigger: GGGAAAACAGAGAGAGAACAAGCAGAGAGAGGCCAG...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | AATAACTGTGTGAACTGGAAGCCAAAGTTCATGTTTTaGACTGCATCCCCATCCTTTCACACCATAGAGAAC | + |
Preference number: 3 (lower is better) Translates to: NNCVNWKPKFMF*TASPSFHTIEN Trigger: GTTCTCTATGGTGTGAAAGGATGGGGATGCAGTTCAAAACATGAACTTTGGCTTCCAGTTCACACAGTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR GCA 72 bp | TATTGTTTCTTGAGTCCCACTGGGTTTGAGATAAAGTaGCTGCTCATTCTCCTTTGTGTATGGCATACTAAC | + |
Preference number: 3 (lower is better) Translates to: YCFLSPTGFEIK*LLILLCVWHTN Trigger: GTTAGTATGCCATACACAAAGGAGAATGAGCAGGCACTTTATCTCAAACCCAGTGGGACTCAAGAAACAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR CCA 72 bp | GTTACTAATTGCTCCAAACTGACACATTGTAGGATTTaGTACCCCGTGTCCTGTCCATTTAAATGCAATACC | + |
Preference number: 3 (lower is better) Translates to: VTNCSKLTHCRI*YPVSCPFKCNT Trigger: GGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTACAATGTGTCAGTTTGGAGCAATTAGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR CCA 72 bp | TCAGACTTTGCAACATCTTCTGGAAGATCTGTTATATaGACTGAAAACACACCCAACTTCAGTCACCATAGC | + |
Preference number: 3 (lower is better) Translates to: SDFATSSGRSVI*TENTPNFSHHS Trigger: GCTATGGTGACTGAAGTTGGGTGTGTTTTCAGTCCATATAACAGATCTTCCAGAAGATGTTGCAAAGTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR-3UTR CAA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCGAGGTGGGACCTTGCTaGAAGAAGTACAGCAGTAGT | + |
Preference number: 3 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPEVGPC*KKYSSS Trigger: ACTACTGCTGTACTTCTTCAAGCAAGGTCCCACCTC...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR CAA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCTTAGGAGGTGGGACCTaGCTTGAAGAAGTACAGCAG | + |
Preference number: 3 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPLGGGT*LEEVQQ Trigger: CTGCTGTACTTCTTCAAGCAAGGTCCCACCTCCTAA...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | AACTTCAGTCACCATAGCTCTCTGCCCTCTCATGACTaGAACTTCACACAGTTAAGTTTAATTTCCATTCTC | + |
Preference number: 3 (lower is better) Translates to: NFSHHSSLPSHD*NFTQLSLISIL Trigger: GAGAATGGAAATTAAACTTAACTGTGTGAAGTTTCAGTCATGAGAGGGCAGAGAGCTATGGTGACTGAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR GCA 72 bp | ATCTTCAAAAGAAGGCTTAGGTATAAAAACATCCCATaGTTACTATTCAGTAGCTTGAGGTGTGCCTCCAGA | + |
Preference number: 3 (lower is better) Translates to: IFKRRLRYKNIP*LLFSSLRCASR Trigger: TCTGGAGGCACACCTCAAGCTACTGAATAGTAAGCATGGGATGTTTTTATACCTAAGCCTTCTTTTGAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR GCA 72 bp | GACGTTGATTTGCATGACCCTTATTTACATGGCAGATaGTGCACAACTGGAAATAAATTACATTCACAGCAG | + |
Preference number: 3 (lower is better) Translates to: DVDLHDPYLHGR*CTTGNKLHSQQ Trigger: CTGCTGTGAATGTAATTTATTTCCAGTTGTGCAGCATCTGCCATGTAAATAAGGGTCATGCAAATCAACGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR CCA 72 bp | TTACTATTCTCCTGCAGGTGGTGTAAAAGGACACCCTaGAAATCTGCACAAAGAAAAATTTACTGGAAATGC | + |
Preference number: 3 (lower is better) Translates to: LLFSCRWCKRTP*KSAQRKIYWKC Trigger: GCATTTCCAGTAAATTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR CAA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCCAAAGTGTCCACACTTaGGTCTTCCTTCTTCTACAG | + |
Preference number: 3 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPQSVHT*VFLLLQ Trigger: CTGTAGAAGAAGGAAGACCAAAGTGTGGACACTTTG...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR CAA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCGAGGAACAAGTGTTCTaGACACGTGAAGCATTTCTC | + |
Preference number: 3 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPEEQVF*TREAFL Trigger: GAGAAATGCTTCACGTGTCAAGAACACTTGTTCCTC...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR CAA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCCCGTTGACTATTGCTTaGCTGTATCCTGTCTACTTC | + |
Preference number: 3 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPPLTIA*LYPVYF Trigger: GAAGTAGACAGGATACAGCAAAGCAATAGTCAACGG...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR GCA 72 bp | TTTCAATGGTGGATTTGGACCTGCCTATATTTCCTGTaGCTAGATATCTTCTTTTCTCTTAGAGAATTCCCA | + |
Preference number: 3 (lower is better) Translates to: FQWWIWTCLYFL*LDIFFSLREFP Trigger: TGGGAATTCTCTAAGAGAAAAGAAGATATCTAGGCACAGGAAATATAGGCAGGTCCAAATCCACCATTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR GCA 72 bp | GTTGATTTGCATGACCCTTATTTACATGGCAGATGCTaGACAACTGGAAATAAATTACATTCACAGCAGCTT | + |
Preference number: 3 (lower is better) Translates to: VDLHDPYLHGRC*TTGNKLHSQQL Trigger: AAGCTGCTGTGAATGTAATTTATTTCCAGTTGTGCAGCATCTGCCATGTAAATAAGGGTCATGCAAATCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR CCA 72 bp | CAAACATTGATCTCTGAGAGGTTTGAATTGATTTGTTaGTGGAGAGGTCAGCCATTGGTTACAGTATTATTG | + |
Preference number: 3 (lower is better) Translates to: QTLISERFELIC*WRGQPLVTVLL Trigger: CAATAATACTGTAACCAATGGCTGACCTCTCCACCAACAAATCAATTCAAACCTCTCAGAGATCAATGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR-3UTR CAA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTACAAACAATGACACCATaGCATACACTAGCAAGCATT | + |
Preference number: 3 (lower is better) Translates to: NNSFNILAKTTSLISALLQTMTP*HTLASI Trigger: AATGCTTGCTAGTGTATGCAATGGTGTCATTGTTTG...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | ACACACTCCTGCTTTGCTGTAGGTGCTCCACATACATaGATGTTCTTACAAAAACAACAAGAGAGTATAAAT | + |
Preference number: 3 (lower is better) Translates to: THSCFAVGAPHT*MFLQKQQESIN Trigger: ATTTATACTCTCTTGTTGTTTTTGTAAGAACATTCATGTATGTGGAGCACCTACAGCAAAGCAGGAGTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR GCA 72 bp | AATCAACCAACCATATTTTACCTTATAAATGTGGAGTaGAGGCCATTAATAAAACACCAGACTGTGGAACCA | + |
Preference number: 3 (lower is better) Translates to: NQPTIFYLINVE*RPLIKHQTVEP Trigger: TGGTTCCACAGTCTGGTGTTTTATTAATGGCCTGCACTCCACATTTATAAGGTAAAATATGGTTGGTTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR TCA 72 bp | GAGCCATTAATAAGCTATTTCTTGGTCCTTATTTACTaGGTACGTAATGCTCTCAATGAGAGTAGGAAAAAC | + |
Preference number: 3 (lower is better) Translates to: EPLISYFLVLIY*VRNALNESRKN Trigger: GTTTTTCCTACTCTCATTGAGAGCATTACGTACTCAGTAAATAAGGACCAAGAAATAGCTTATTAATGGCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR GCA 72 bp | TCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTaGATTTGTTTAACAAAATTTCTTTATCAGAAACTA | + |
Preference number: 3 (lower is better) Translates to: SPPREQYATQWH*ICLTKFLYQKL Trigger: TAGTTTCTGATAAAGAAATTTTGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR TCA 72 bp | GTTGATTTAAAAGTATTCTATCTACTGACAACTGCCTaGACTTTGGAAGGTGCTGAAATCCATATTTCTACA | + |
Preference number: 3 (lower is better) Translates to: VDLKVFYLLTTA*TLEGAEIHIST Trigger: TGTAGAAATATGGATTTCAGCACCTTCCAAAGTTCAGGCAGTTGTCAGTAGATAGAATACTTTTAAATCAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
3UTR TCA 72 bp | CTTTCAAAGGAATTTCAAAGGTTATGTGTTCCTTTCTaGGTTAATACTCCTGAAGACTCTCACCATAGAAAA | + |
Preference number: 3 (lower is better) Translates to: LSKEFQRLCVPF*VNTPEDSHHRK Trigger: TTTTCTATGGTGAGAGTCTTCAGGAGTATTAACTCAGAAAGGAACACATAACCTTTGAAATTCCTTTGAAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR GCA 72 bp | CAAGAGAGTATAAATCAACTCAAACTGGAATTTAAATaGTGTTGTAGGATTCACTATGAATACCTGGACTCT | + |
Preference number: 3 (lower is better) Translates to: QESINQLKLEFK*CCRIHYEYLDS Trigger: AGAGTCCAGGTATTCATAGTGAATCCTACAACAGCATTTAAATTCCAGTTTGAGTTGATTTATACTCTCTTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
CDS-3UTR GCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGATCCTGGTCGGCTGGCTaGGACTGGGTTGCCCTGGCC | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRSWSAG*DWVALA Trigger: GGCCAGGGCAACCCAGTCGCAGCCAGCCGACCAGGA...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR CAA 72 bp | GCAGATTTGGGGATTTATAACCTGGCCTCTCTCTGCTaGTTCTCTCTCTGTTTTCCCAGCAGCCAGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: ADLGIYNLASLC*FSLCFPSSQPG Trigger: GCCTGGCTGGCTGCTGGGAAAACAGAGAGAGAACAAGCAGAGAGAGGCCAGGTTATAAATCCCCAAATCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
CDS-3UTR CCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGGCGACTGGGTTGCCCTaGCCCCTGGGGTGGGTTGCT | + |
Preference number: 4 (lower is better) Translates to: FCCMRTFQDQSTCKSWSEATGLP*PLGWVA Trigger: AGCAACCCACCCCAGGGGCCAGGGCAACCCAGTCGC...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR CAA 72 bp | TGGAAAGCAGGCAGAGGCAAGCGGTTCCCTGTGAGTTaGAGGTCAGCTTGCTCTATGTTAGTATTGACCCTG | + |
Preference number: 4 (lower is better) Translates to: WKAGRGKRFPVS*RSACSMLVLTL Trigger: CAGGGTCAATACTAACATAGAGCAAGCTGACCTCAAACTCACAGGGAACCGCTTGCCTCTGCCTGCTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
3UTR CAA 72 bp | CCCTCAAGACAGTCTGCTGTGGGAATGAAGGGAGCTTaGGAATTTTGGAATTGTGGGGGCAGGTTTAGGCTC | + |
Preference number: 4 (lower is better) Translates to: PSRQSAVGMKGA*EFWNCGGRFRL Trigger: GAGCCTAAACCTGCCCCCACAATTCCAAAATTCCAAAGCTCCCTTCATTCCCACAGCAGACTGTCTTGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
CDS-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAGCCGATTCAACCACCTaGCCACTGTCCTCGTGTTGC | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRADSTT*PLSSCC Trigger: GCAACACGAGGACAGTGGTCAGGTGGTTGAATCGGC...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAGCCGATTCAACCACCTaGCCACTGTCCTCGTGTTGC | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTADSTT*PLSSCC Trigger: GCAACACGAGGACAGTGGTCAGGTGGTTGAATCGGC...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
CDS-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAGGGTTGTCTGTGATGTaGAGGCTGACCACTGGGACC | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRGLSVM*RLTTGT Trigger: GGTCCCAGTGGTCAGCCTTCACATCACAGACAACCC...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
CDS-3UTR TCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAGGGTTGTCTGTGATGTaGAGGCTGACCACTGGGACC | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTGLSVM*RLTTGT Trigger: GGTCCCAGTGGTCAGCCTTCACATCACAGACAACCC...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
CDS-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTTGGAGGGCTGACACTTaGTGTGATGGGACACGCTGG | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAWRADT*CDGTRW Trigger: CCAGCGTGTCCCATCACATCAAGTGTCAGCCCTCCA...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239072.2 |
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CDS-3UTR GCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAATCAGCTGCTGTCCTTaGACACCCCAGGCCGCATAC | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRISCCP*TPQAAY Trigger: GTATGCGGCCTGGGGTGTGCAAGGACAGCAGCTGAT...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR GCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAATCAGCTGCTGTCCTTaGACACCCCAGGCCGCATAC | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTISCCP*TPQAAY Trigger: GTATGCGGCCTGGGGTGTGCAAGGACAGCAGCTGAT...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR CAA 72 bp | CCCAAGGCGCCAGGGACTGCAGCTAAGTCATATGACTaGCACCTGACTTCCTCATATAAGCCACAAACATCT | + |
Preference number: 4 (lower is better) Translates to: PKAPGTAAKSYD*HLTSSYKPQTS Trigger: AGATGTTTGTGGCTTATATGAGGAAGTCAGGTGCAAGTCATATGACTTAGCTGCAGTCCCTGGCGCCTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGACGCATACTGCAACACTaGGTCCTCAACTTCTGGGGG | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRRILQH*VLNFWG Trigger: CCCCCAGAAGTTGAGGACTCAGTGTTGCAGTATGCG...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTCGCATACTGCAACACTaGGTCCTCAACTTCTGGGGG | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIARILQH*VLNFWG Trigger: CCCCCAGAAGTTGAGGACTCAGTGTTGCAGTATGCG...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGACACTTCCCAGTTTCCTaGTGTCAGATGCCGCACCGT | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRHFPVS*CQMPHR Trigger: ACGGTGCGGCATCTGACATCAGGAAACTGGGAAGTG...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR GCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGACCCCAGGCCGCATACTaGAACACTGAGTCCTCAACT | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRPQAAY*NTESST Trigger: AGTTGAGGACTCAGTGTTGCAGTATGCGGCCTGGGG...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR GCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACACCCCAGGCCGCATACTaGAACACTGAGTCCTCAACT | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTPQAAY*NTESST Trigger: AGTTGAGGACTCAGTGTTGCAGTATGCGGCCTGGGG...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAACGCATACTGCAACACTaGGTCCTCAACTTCTGGGGG | + |
Preference number: 4 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKRILQH*VLNFWG Trigger: CCCCCAGAAGTTGAGGACTCAGTGTTGCAGTATGCG...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR GCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGATCAGCTGCTGTCCTTaGACACCCCAGGCCGCATAC | + |
Preference number: 4 (lower is better) Translates to: FCCMRTFQDQSTCKSWSEISCCP*TPQAAY Trigger: GTATGCGGCCTGGGGTGTGCAAGGACAGCAGCTGAT...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGATCACCAGCAGGGCAATaGCGATTCCCTTCCAGTTTC | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRSPAGQ*RFPSSF Trigger: GAAACTGGAAGGGAATCGCCATTGCCCTGCTGGTGA...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAGTGAAGGCTGACCACTaGGACCTTTGGACCTTCACA | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRVKADH*DLWTFT Trigger: TGTGAAGGTCCAAAGGTCCCAGTGGTCAGCCTTCAC...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTGTGAAGGCTGACCACTaGGACCTTTGGACCTTCACA | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAVKADH*DLWTFT Trigger: TGTGAAGGTCCAAAGGTCCCAGTGGTCAGCCTTCAC...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAACTTCATGTCTGAGATaGGTGCAACCACGGCTCCAC | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRTSCLR*VQPRLH Trigger: GTGGAGCCGTGGTTGCACCCATCTCAGACATGAAGT...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GCCAGCTGTATCAGGAATCTTAAAATAAACCTTCCTTCCCTAAGTTGCATTTGGCACTTCCCAGTTTCCTaGTGTCAGATGCCGCACCGT | + |
Preference number: 4 (lower is better) Translates to: ASCIRNLKINLPSLSCIWHFPVS*CQMPHR Trigger: ACGGTGCGGCATCTGACATCAGGAAACTGGGAAGTG...CCAAATGCAACTTAGGGAAGGAAGGTTTATTTTAAGATTCCTGATACAGCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTATACAACTTCATGTCTaGGATGGGTGCAACCACGGC | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAIQLHV*DGCNHG Trigger: GCCGTGGTTGCACCCATCTCAGACATGAAGTTGTAT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAATACAACTTCATGTCTaGGATGGGTGCAACCACGGC | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRIQLHV*DGCNHG Trigger: GCCGTGGTTGCACCCATCTCAGACATGAAGTTGTAT...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGATACTTCCTAGTTCCTTaGTGGTCTTGGAGGGCTGAC | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRYFLVP*WSWRAD Trigger: GTCAGCCCTCCAAGACCATCAAGGAACTAGGAAGTA...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239072.2 |
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CDS-3UTR GCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTACCTGGGGTGGGTTGCTaGTCCTGCTTCATGGCTGTC | + |
Preference number: 4 (lower is better) Translates to: NNSFNILAKTTSLISALLPGVGC*SCFMAV Trigger: GACAGCCATGAAGCAGGAGCAGCAACCCACCCCAGG...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR GCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGCCCCAGGCCGCATACTaGAACACTGAGTCCTCAACT | + |
Preference number: 4 (lower is better) Translates to: FCCMRTFQDQSTCKSWSEPQAAY*NTESST Trigger: AGTTGAGGACTCAGTGTTGCAGTATGCGGCCTGGGG...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR GCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAGTATGGGTACTGCTTTaGTTTGGGGTACAGTGCTCC | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTVWVLL*FGVQCS Trigger: GGAGCACTGTACCCCAAAGCAAAGCAGTACCCATAC...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR GCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAGTATGGGTACTGCTTTaGTTTGGGGTACAGTGCTCC | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRVWVLL*FGVQCS Trigger: GGAGCACTGTACCCCAAAGCAAAGCAGTACCCATAC...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR GCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTTGCCGCACCGTAATTTaGTCGCTTTTACTCTGGACC | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIACRTVI*SLLLWT Trigger: GGTCCAGAGTAAAAGCGAGCAAATTACGGTGCGGCA...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR GCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACATGCCGCACCGTAATTTaGTCGCTTTTACTCTGGACC | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTCRTVI*SLLLWT Trigger: GGTCCAGAGTAAAAGCGAGCAAATTACGGTGCGGCA...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR CAA 72 bp | TCTTCCTGGCCAGTTGAGCGCGCAATAGGCAATGGCTaGAATCATTCTCCTATGGTATCCAACCAGTTCTTA | + |
Preference number: 4 (lower is better) Translates to: SSWPVERAIGNG*NHSPMVSNQFL Trigger: TAAGAACTGGTTGGATACCATAGGAGAATGATTCAAGCCATTGCCTATTGCGCGCTCAACTGGCCAGGAAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 72 bp | GCATATGAATGGGGAAGTCCTGTTACCTGTGCTTCCTaGCCAGGCCTTTTCTTTCCCATTGGTATACTCCTT | + |
Preference number: 4 (lower is better) Translates to: AYEWGSPVTCAS*PGLFFPIGILL Trigger: AAGGAGTATACCAATGGGAAAGAAAAGGCCTGGCAAGGAAGCACAGGTAACAGGACTTCCCCATTCATATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
CDS-3UTR TCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACACCGTTCAGAGAAAGCTaGGGCATACAACTTCATGTC | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTPFRES*GIQLHV Trigger: GACATGAAGTTGTATGCCTCAGCTTTCTCTGAACGG...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
CDS-3UTR GCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGATGCTTTGGGGTACAGTaGTCCAGTAAACCGAGGTAT | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRCFGVQ*SSKPRY Trigger: ATACCTCGGTTTACTGGAGCACTGTACCCCAAAGCA...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR GCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACATGCTTTGGGGTACAGTaGTCCAGTAAACCGAGGTAT | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTCFGVQ*SSKPRY Trigger: ATACCTCGGTTTACTGGAGCACTGTACCCCAAAGCA...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
CDS-3UTR GCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACATTTCCTGATGTCAGATaGCGCACCGTAATTTGCTCG | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTFPDVR*RTVICS Trigger: CGAGCAAATTACGGTGCGGCATCTGACATCAGGAAA...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | GCCAGCTGTATCAGGAATCTTAAAATAAACCTTCCTTCCCTAAGTTGCATTTGGTCACCAGCAGGGCAATaGCGATTCCCTTCCAGTTTC | + |
Preference number: 4 (lower is better) Translates to: ASCIRNLKINLPSLSCIWSPAGQ*RFPSSF Trigger: GAAACTGGAAGGGAATCGCCATTGCCCTGCTGGTGA...CCAAATGCAACTTAGGGAAGGAAGGTTTATTTTAAGATTCCTGATACAGCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAACTTGCTTCCATCTCTaGAAAACACTGGCTCCTCGT | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRTCFHL*KTLAPR Trigger: ACGAGGAGCCAGTGTTTTCCAGAGATGGAAGCAAGT...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTACTTGCTTCCATCTCTaGAAAACACTGGCTCCTCGT | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIATCFHL*KTLAPR Trigger: ACGAGGAGCCAGTGTTTTCCAGAGATGGAAGCAAGT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGATATAGTTGCCTCCCTTaGGGAGAAGATTCTGTGCTC | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRYSCLP*GEDSVL Trigger: GAGCACAGAATCTTCTCCCCAAGGGAGGCAACTATA...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACATATAGTTGCCTCCCTTaGGGAGAAGATTCTGTGCTC | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTYSCLP*GEDSVL Trigger: GAGCACAGAATCTTCTCCCCAAGGGAGGCAACTATA...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAAAAACTTTCAGGCCCTaGAATCCACTTCCTCTGCCA | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRKTFRP*NPLPLP Trigger: TGGCAGAGGAAGTGGATTCCAGGGCCTGAAAGTTTT...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAAAAACTTTCAGGCCCTaGAATCCACTTCCTCTGCCA | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTKTFRP*NPLPLP Trigger: TGGCAGAGGAAGTGGATTCCAGGGCCTGAAAGTTTT...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTTTTACAGCAGCTACTTaGTCCTTTGCCTCCACTGAG | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAFTAAT*SFASTE Trigger: CTCAGTGGAGGCAAAGGACCAAGTAGCTGCTGTAAA...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGACTTCATGTCTGAGATaGGTGCAACCACGGCTCCAC | + |
Preference number: 4 (lower is better) Translates to: FCCMRTFQDQSTCKSWSETSCLR*VQPRLH Trigger: GTGGAGCCGTGGTTGCACCCATCTCAGACATGAAGT...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 72 bp | CTGCTGGCTTCCAGTAACTGGGTTTCAATGGTGGATTaGGACCTGCCTATATTTCCTGTGCCTAGATATCTT | + |
Preference number: 4 (lower is better) Translates to: LLASSNWVSMVD*DLPIFPVPRYL Trigger: AAGATATCTAGGCACAGGAAATATAGGCAGGTCCAAATCCACCATTGAAACCCAGTTACTGGAAGCCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 72 bp | CTGGTTCCCTCAGAAAGGTGCCTGAGATTTGGCAACTaGAACAAGTTTCCAGAAGCAGCTAAGCACTTAACT | + |
Preference number: 4 (lower is better) Translates to: LVPSERCLRFGN*NKFPEAAKHLT Trigger: AGTTAAGTGCTTAGCTGCTTCTGGAAACTTGTTCAAGTTGCCAAATCTCAGGCACCTTTCTGAGGGAACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | ACCATAGAGAACAACAGAGCAACAGAACCTCCTTTATGTAATTTGAAAGTGAAAGGGTTGTCTGTGATGTaGAGGCTGACCACTGGGACC | + |
Preference number: 4 (lower is better) Translates to: TIENNRATEPPLCNLKVKGLSVM*RLTTGT Trigger: GGTCCCAGTGGTCAGCCTTCACATCACAGACAACCC...TTTCACTTTCAAATTACATAAAGGAGGTTCTGTTGCTCTGTTGTTCTCTATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACACAAGAGGAAATACCTTaGTGGGTTGTCTGTGATGTG | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTQEEIP*WVVCDV Trigger: CACATCACAGACAACCCATCAAGGTATTTCCTCTTG...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTCAAGAGGAAATACCTTaGTGGGTTGTCTGTGATGTG | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAQEEIP*WVVCDV Trigger: CACATCACAGACAACCCATCAAGGTATTTCCTCTTG...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGACAAGAGGAAATACCTTaGTGGGTTGTCTGTGATGTG | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRQEEIP*WVVCDV Trigger: CACATCACAGACAACCCATCAAGGTATTTCCTCTTG...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GCCAGCTGTATCAGGAATCTTAAAATAAACCTTCCTTCCCTAAGTTGCATTTGGATACAACTTCATGTCTaGGATGGGTGCAACCACGGC | + |
Preference number: 4 (lower is better) Translates to: ASCIRNLKINLPSLSCIWIQLHV*DGCNHG Trigger: GCCGTGGTTGCACCCATCTCAGACATGAAGTTGTAT...CCAAATGCAACTTAGGGAAGGAAGGTTTATTTTAAGATTCCTGATACAGCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CCA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAAACTTGCTTCCATCTCTaGAAAACACTGGCTCCTCGT | + |
Preference number: 4 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKTCFHL*KTLAPR Trigger: ACGAGGAGCCAGTGTTTTCCAGAGATGGAAGCAAGT...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 72 bp | GAATACCTGGACTCTCCACAAGAGGAACAAGTGTTCTaGACACGTGAAGCATTTCTCTATCTTGTAACTCCC | + |
Preference number: 4 (lower is better) Translates to: EYLDSPQEEQVF*TREAFLYLVTP Trigger: GGGAGTTACAAGATAGAGAAATGCTTCACGTGTCAAGAACACTTGTTCCTCTTGTGGAGAGTCCAGGTATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 72 bp | AGCTCAGCTCTTTACCTGGGTGCTGGAGATCCAACATaGACCCTTGACCTTTCAATGTTGGTACTTTTGATT | + |
Preference number: 4 (lower is better) Translates to: SSALYLGAGDPT*TLDLSMLVLLI Trigger: AATCAAAAGTACCAACATTGAAAGGTCAAGGGTCAATGTTGGATCTCCAGCACCCAGGTAAAGAGCTGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 72 bp | CTTGATTTGCATGGCCCTGATTTGCAAGACGTTGATTaGCATGACCCTTATTTACATGGCAGATGCTGCACA | + |
Preference number: 4 (lower is better) Translates to: LDLHGPDLQDVD*HDPYLHGRCCT Trigger: TGTGCAGCATCTGCCATGTAAATAAGGGTCATGCAAATCAACGTCTTGCAAATCAGGGCCATGCAAATCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 72 bp | GGGGAACCTCAAACATTGATCTCTGAGAGGTTTGAATaGATTTGTTGGTGGAGAGGTCAGCCATTGGTTACA | + |
Preference number: 4 (lower is better) Translates to: GEPQTLISERFE*ICWWRGQPLVT Trigger: TGTAACCAATGGCTGACCTCTCCACCAACAAATCAATTCAAACCTCTCAGAGATCAATGTTTGAGGTTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAATCAGCTCCAAAGTATaGGTTGGTCCATACAGGTTT | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRISSKV*VGPYRF Trigger: AAACCTGTATGGACCAACTCATACTTTGGAGCTGAT...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTATCAGCTCCAAAGTATaGGTTGGTCCATACAGGTTT | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAISSKV*VGPYRF Trigger: AAACCTGTATGGACCAACTCATACTTTGGAGCTGAT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAGGTGTCAATAAGAACTaGATCCCAGTCAACATGGAA | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRGVNKN*IPVNME Trigger: TTCCATGTTGACTGGGATTCAGTTCTTATTGACACC...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTGGTGTCAATAAGAACTaGATCCCAGTCAACATGGAA | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAGVNKN*IPVNME Trigger: TTCCATGTTGACTGGGATTCAGTTCTTATTGACACC...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGACCACGGCTCCACATTTaGAAAACTTCTCATCTGATT | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRPRLHI*KTSHLI Trigger: AATCAGATGAGAAGTTTTTCAAATGTGGAGCCGTGG...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACACCACGGCTCCACATTTaGAAAACTTCTCATCTGATT | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTPRLHI*KTSHLI Trigger: AATCAGATGAGAAGTTTTTCAAATGTGGAGCCGTGG...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAAGGAACATAGCTATGTaGTGGAATTCTCCTCTTCCA | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTRNIAM*WNSPLP Trigger: TGGAAGAGGAGAATTCCACCACATAGCTATGTTCCT...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAAGGAACATAGCTATGTaGTGGAATTCTCCTCTTCCA | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRRNIAM*WNSPLP Trigger: TGGAAGAGGAGAATTCCACCACATAGCTATGTTCCT...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGTATAGTTGCCTCCCTTaGGGAGAAGATTCTGTGCTC | + |
Preference number: 4 (lower is better) Translates to: FCCMRTFQDQSTCKSWSEYSCLP*GEDSVL Trigger: GAGCACAGAATCTTCTCCCCAAGGGAGGCAACTATA...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGATTATTCATCTTCTTCTaGTTCCTGTGGCAGCACAGA | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRLFIFF*FLWQHR Trigger: TCTGTGCTGCCACAGGAACCAGAAGAAGATGAATAA...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTTTATTCATCTTCTTCTaGTTCCTGTGGCAGCACAGA | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIALFIFF*FLWQHR Trigger: TCTGTGCTGCCACAGGAACCAGAAGAAGATGAATAA...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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3UTR CAA 72 bp | ACACCACAAAGATCACAGCATCCTAAAGGACAGATGTaGGGATGTAATGAGAATCACACTTGCTTGAAGTGC | + |
Preference number: 4 (lower is better) Translates to: TPQRSQHPKGQM*GCNENHTCLKC Trigger: GCACTTCAAGCAAGTGTGATTCTCATTACATCCCAACATCTGTCCTTTAGGATGCTGTGATCTTTGTGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 72 bp | AACAACACTGAAGTAAACAGGATCAGAAAAAGGAAGTaGGTTCCATGTCCAAGTCTGGCAGCATCTCAACTG | + |
Preference number: 4 (lower is better) Translates to: NNTEVNRIRKRK*VPCPSLAASQL Trigger: CAGTTGAGATGCTGCCAGACTTGGACATGGAACCAACTTCCTTTTTCTGATCCTGTTTACTTCAGTGTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 72 bp | TGTTGGTGGAGAGGTCAGCCATTGGTTACAGTATTATaGCTCGATGGTGTTAGACAGATAAGAAGGACAGAA | + |
Preference number: 4 (lower is better) Translates to: CWWRGQPLVTVL*LDGVRQIRRTE Trigger: TTCTGTCCTTCTTATCTGTCTAACACCATCGAGCAATAATACTGTAACCAATGGCTGACCTCTCCACCAACA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTGCGAGCTTCTTCTTCTaGATAGTTTCTTTCATCACA | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAASFFF*IVSFIT Trigger: TGTGATGAAAGAAACTATTCAGAAGAAGAAGCTCGC...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAGCGAGCTTCTTCTTCTaGATAGTTTCTTTCATCACA | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRASFFF*IVSFIT Trigger: TGTGATGAAAGAAACTATTCAGAAGAAGAAGCTCGC...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAGCTGAATGCTGGAAATaGACTTTTGTATCAGCAGTT | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTAECWK*TFVSAV Trigger: AACTGCTGATACAAAAGTTCATTTCCAGCATTCAGC...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTGCTGAATGCTGGAAATaGACTTTTGTATCAGCAGTT | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAAECWK*TFVSAV Trigger: AACTGCTGATACAAAAGTTCATTTCCAGCATTCAGC...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR GCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACATCTAGTCTCTCTCTTTaGGAGCTTCTTCTTCTGAAT | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTSSLSL*ELLLLN Trigger: ATTCAGAAGAAGAAGCTCGCAAAGAGAGAGACTAGA...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR GCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGATCTAGTCTCTCTCTTTaGGAGCTTCTTCTTCTGAAT | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRSSLSL*ELLLLN Trigger: ATTCAGAAGAAGAAGCTCGCAAAGAGAGAGACTAGA...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTCTCCAAAGTATGAGTTaGTCCATACAGGTTTACAAC | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIALQSMS*SIQVYN Trigger: GTTGTAAACCTGTATGGACCAACTCATACTTTGGAG...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTTTTAAAAATGTCGGGTaGCATCAGCTCCAAAGTATG | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAFKNVG*HQLQSM Trigger: CATACTTTGGAGCTGATGCCACCCGACATTTTTAAA...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGATTTAAAAATGTCGGGTaGCATCAGCTCCAAAGTATG | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRFKNVG*HQLQSM Trigger: CATACTTTGGAGCTGATGCCACCCGACATTTTTAAA...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAGTAAAGAACTGCTCTTaGTATCAGGTTGATAGTAGA | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRVKNCS*YQVDSR Trigger: TCTACTATCAACCTGATATCAAGAGCAGTTCTTTAC...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GCCAGCTGTATCAGGAATCTTAAAATAAACCTTCCTTCCCTAAGTTGCATTTGGATCAGCTCCAAAGTATaGGTTGGTCCATACAGGTTT | + |
Preference number: 4 (lower is better) Translates to: ASCIRNLKINLPSLSCIWISSKV*VGPYRF Trigger: AAACCTGTATGGACCAACTCATACTTTGGAGCTGAT...CCAAATGCAACTTAGGGAAGGAAGGTTTATTTTAAGATTCCTGATACAGCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAAATAACAAGAAATGTTaGTTCATGGGGCTAAAGCTG | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTNNKKC*FMGLKL Trigger: CAGCTTTAGCCCCATGAATCAACATTTCTTGTTATT...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTAATAACAAGAAATGTTaGTTCATGGGGCTAAAGCTG | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIANNKKC*FMGLKL Trigger: CAGCTTTAGCCCCATGAATCAACATTTCTTGTTATT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGGGTGTCAATAAGAACTaGATCCCAGTCAACATGGAA | + |
Preference number: 4 (lower is better) Translates to: FCCMRTFQDQSTCKSWSEGVNKN*IPVNME Trigger: TTCCATGTTGACTGGGATTCAGTTCTTATTGACACC...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | GCCAGCTGTATCAGGAATCTTAAAATAAACCTTCCTTCCCTAAGTTGCATTTGGCCACGGCTCCACATTTaGAAAACTTCTCATCTGATT | + |
Preference number: 4 (lower is better) Translates to: ASCIRNLKINLPSLSCIWPRLHI*KTSHLI Trigger: AATCAGATGAGAAGTTTTTCAAATGTGGAGCCGTGG...CCAAATGCAACTTAGGGAAGGAAGGTTTATTTTAAGATTCCTGATACAGCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAAGCTGAATGCTGGAAATaGACTTTTGTATCAGCAGTT | + |
Preference number: 4 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKAECWK*TFVSAV Trigger: AACTGCTGATACAAAAGTTCATTTCCAGCATTCAGC...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACACTTGATCAATTCTGCTaGATGCTGGAAATGAACTTT | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTLDQFC*MLEMNF Trigger: AAAGTTCATTTCCAGCATTCAGCAGAATTGATCAAG...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR TCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTCTTGATCAATTCTGCTaGATGCTGGAAATGAACTTT | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIALDQFC*MLEMNF Trigger: AAAGTTCATTTCCAGCATTCAGCAGAATTGATCAAG...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
CDS-3UTR GCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTATGCTTTGGGGTACAGTaGTCCAGTAAACCGAGGTAT | + |
Preference number: 4 (lower is better) Translates to: NNSFNILAKTTSLISALLCFGVQ*SSKPRY Trigger: ATACCTCGGTTTACTGGAGCACTGTACCCCAAAGCA...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR GCA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTGTATGGGTACTGCTTTaGTTTGGGGTACAGTGCTCC | + |
Preference number: 4 (lower is better) Translates to: HLFHSLTQLKEECCEFRTVWVLL*FGVQCS Trigger: GGAGCACTGTACCCCAAAGCAAAGCAGTACCCATAC...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
||
CDS-3UTR GCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTTCTGCCATCAAATCTTaGTACAATGACATTATCGGT | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIASAIKS*YNDIIG Trigger: ACCGATAATGTCATTGTAGCAAGATTTGATGGCAGA...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR GCA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGATCTGCCATCAAATCTTaGTACAATGACATTATCGGT | + |
Preference number: 4 (lower is better) Translates to: GLSLTAIDALSRHGMLSRSAIKS*YNDIIG Trigger: ACCGATAATGTCATTGTAGCAAGATTTGATGGCAGA...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
||
CDS-3UTR GCA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTCCAGCTTTTATCAGATaGTTGATCAATTCTGCTGAA | + |
Preference number: 4 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAPAFIR*LINSAE Trigger: TTCAGCAGAATTGATCAAGCATCTGATAAAAGCTGG...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR GCA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACACCAGCTTTTATCAGATaGTTGATCAATTCTGCTGAA | + |
Preference number: 4 (lower is better) Translates to: PSPPREQYATQWHCICLTPAFIR*LINSAE Trigger: TTCAGCAGAATTGATCAAGCATCTGATAAAAGCTGG...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CCA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGAGGAACATAGCTATGTaGTGGAATTCTCCTCTTCCA | + |
Preference number: 4 (lower is better) Translates to: FCCMRTFQDQSTCKSWSERNIAM*WNSPLP Trigger: TGGAAGAGGAGAATTCCACCACATAGCTATGTTCCT...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTCCGTTCAGAGAAAGCTaGGGCATACAACTTCATGTC | + |
Preference number: 4 (lower is better) Translates to: HLFHSLTQLKEECCEFRTPFRES*GIQLHV Trigger: GACATGAAGTTGTATGCCTCAGCTTTCTCTGAACGG...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR GCA 90 bp | ACCATAGAGAACAACAGAGCAACAGAACCTCCTTTATGTAATTTGAAAGTGAAATTTCCTGATGTCAGATaGCGCACCGTAATTTGCTCG | + |
Preference number: 4 (lower is better) Translates to: TIENNRATEPPLCNLKVKFPDVR*RTVICS Trigger: CGAGCAAATTACGGTGCGGCATCTGACATCAGGAAA...TTTCACTTTCAAATTACATAAAGGAGGTTCTGTTGCTCTGTTGTTCTCTATGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CCA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCAAAACTTTCAGGCCCTaGAATCCACTTCCTCTGCCA | + |
Preference number: 4 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPKTFRP*NPLPLP Trigger: TGGCAGAGGAAGTGGATTCCAGGGCCTGAAAGTTTT...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | GCCAGCTGTATCAGGAATCTTAAAATAAACCTTCCTTCCCTAAGTTGCATTTGGAATAACAAGAAATGTTaGTTCATGGGGCTAAAGCTG | + |
Preference number: 4 (lower is better) Translates to: ASCIRNLKINLPSLSCIWNNKKC*FMGLKL Trigger: CAGCTTTAGCCCCATGAATCAACATTTCTTGTTATT...CCAAATGCAACTTAGGGAAGGAAGGTTTATTTTAAGATTCCTGATACAGCTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 72 bp | CCTGATTTACATGAACTTGATTTGCATGGCCCTGATTaGCAAGACGTTGATTTGCATGACCCTTATTTACAT | + |
Preference number: 4 (lower is better) Translates to: PDLHELDLHGPD*QDVDLHDPYLH Trigger: ATGTAAATAAGGGTCATGCAAATCAACGTCTTGCAAATCAGGGCCATGCAAATCAAGTTCATGTAAATCAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CCA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTATTTAAAAATGTCGGGTaGCATCAGCTCCAAAGTATG | + |
Preference number: 4 (lower is better) Translates to: NNSFNILAKTTSLISALLFKNVG*HQLQSM Trigger: CATACTTTGGAGCTGATGCCACCCGACATTTTTAAA...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CCA 90 bp | ACCATAGAGAACAACAGAGCAACAGAACCTCCTTTATGTAATTTGAAAGTGAAATTATTCATCTTCTTCTaGTTCCTGTGGCAGCACAGA | + |
Preference number: 4 (lower is better) Translates to: TIENNRATEPPLCNLKVKLFIFF*FLWQHR Trigger: TCTGTGCTGCCACAGGAACCAGAAGAAGATGAATAA...TTTCACTTTCAAATTACATAAAGGAGGTTCTGTTGCTCTGTTGTTCTCTATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CCA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTCTCCAAAGTATGAGTTaGTCCATACAGGTTTACAAC | + |
Preference number: 4 (lower is better) Translates to: HLFHSLTQLKEECCEFRTLQSMS*SIQVYN Trigger: GTTGTAAACCTGTATGGACCAACTCATACTTTGGAG...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTGTAAAGAACTGCTCTTaGTATCAGGTTGATAGTAGA | + |
Preference number: 4 (lower is better) Translates to: HLFHSLTQLKEECCEFRTVKNCS*YQVDSR Trigger: TCTACTATCAACCTGATATCAAGAGCAGTTCTTTAC...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR TCA 90 bp | CAAATCATCTTTTCTCAATTAATTCCTGTTTCAGAAGATCTGAATTCTCCTCCCCTTGATCAATTCTGCTaGATGCTGGAAATGAACTTT | + |
Preference number: 4 (lower is better) Translates to: QIIFSQLIPVSEDLNSPPLDQFC*MLEMNF Trigger: AAAGTTCATTTCCAGCATTCAGCAGAATTGATCAAG...GGGAGGAGAATTCAGATCTTCTGAAACAGGAATTAATTGAGAAAAGATGATTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR GCA 90 bp | ACCATAGAGAACAACAGAGCAACAGAACCTCCTTTATGTAATTTGAAAGTGAAACCAGCTTTTATCAGATaGTTGATCAATTCTGCTGAA | + |
Preference number: 4 (lower is better) Translates to: TIENNRATEPPLCNLKVKPAFIR*LINSAE Trigger: TTCAGCAGAATTGATCAAGCATCTGATAAAAGCTGG...TTTCACTTTCAAATTACATAAAGGAGGTTCTGTTGCTCTGTTGTTCTCTATGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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3UTR CAA 72 bp | TTAATATGGAGAAATTATCATGGAGGAAGCTTGGCATaGAAGTCTCAGGAAACCTTCAGAATTTTGAATATG | + |
Preference number: 4 (lower is better) Translates to: LIWRNYHGGSLA*KSQETFRILNM Trigger: CATATTCAAAATTCTGAAGGTTTCCTGAGACTTCAATGCCAAGCTTCCTCCATGATAATTTCTCCATATTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CAA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTGGCCCCTGGGGTGGGTaGCTGCTCCTGCTTCATGGC | + |
Preference number: 5 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAGPWGG*LLLLHG Trigger: GCCATGAAGCAGGAGCAGCAACCCACCCCAGGGGCC...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CAA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTACTGGCTGCGACTGGGTaGCCCTGGCCCCTGGGGTGG | + |
Preference number: 5 (lower is better) Translates to: NNSFNILAKTTSLISALLLAATG*PWPLGW Trigger: CCACCCCAGGGGCCAGGGCAACCCAGTCGCAGCCAG...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS TCA 90 bp | ACAGCAGCTACTTGGTCCTTTGCCTCCACTGAGCCTATCCTTCTGTaGATCTCCTGCAAAACTTTCAGGCCCTGGAATCCACTTCCTCTG | + |
Preference number: 5 (lower is better) Translates to: TAATWSFASTEPILL*ISCKTFRPWNPLPL Trigger: CAGAGGAAGTGGATTCCAGGGCCTGAAAGTTTTGCAGGAGATTCACAGAAGGATAGGCTCAGTGGAGGCAAAGGACCAAGTAGCTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS GCA 90 bp | TTGACCTGCCTTGGGGTATGGGTACTGCTTTGCTTTGGGGTACAGTaGTCCAGTAAACCGAGGTATGATCATGTTAGGCACCAACGAGTC | + |
Preference number: 5 (lower is better) Translates to: LTCLGVWVLLCFGVQ*SSKPRYDHVRHQRV Trigger: GACTCGTTGGTGCCTAACATGATCATACCTCGGTTTACTGGAGCACTGTACCCCAAAGCAAAGCAGTACCCATACCCCAAGGCAGGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTAATCAGCTGCTGTCCTaGCACACCCCAGGCCGCATA | + |
Preference number: 5 (lower is better) Translates to: VGFGTPCPVHLNAIPRIANQLLS*HTPGRI Trigger: TATGCGGCCTGGGGTGTGCAAGGACAGCAGCTGATT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAAATCAGCTGCTGTCCTaGCACACCCCAGGCCGCATA | + |
Preference number: 5 (lower is better) Translates to: GLSLTAIDALSRHGMLSRNQLLS*HTPGRI Trigger: TATGCGGCCTGGGGTGTGCAAGGACAGCAGCTGATT...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CCA 90 bp | AACAGGAACAGTCATGAAGAACTTGCTTCCATCTCTGGAAAACACTaGCTCCTCGTTCTGTTTAGAGAGCCAGGTGTCGGACGTCATCTC | + |
Preference number: 5 (lower is better) Translates to: NRNSHEELASISGKH*LLVLFREPGVGRHL Trigger: GAGATGACGTCCGACACCTGGCTCTCTAAACAGAACGAGGAGCCAGTGTTTTCCAGAGATGGAAGCAAGTTCTTCATGACTGTTCCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS TCA 90 bp | GGTCCATACAGGTTTACAACATATAACTTCACTGATGGGTTCGCTTaGCCTGCCTTGGGGTATGGGTACTGCTTTGCTTTGGGGTACAGT | + |
Preference number: 5 (lower is better) Translates to: GPYRFTTYNFTDGFA*PALGYGYCFALGYS Trigger: ACTGTACCCCAAAGCAAAGCAGTACCCATACCCCAAGGCAGGTCAAGCGAACCCATCAGTGAAGTTATATGTTGTAAACCTGTATGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GCCAGCTGTATCAGGAATCTTAAAATAAACCTTCCTTCCCTAAGTTGCATTTGGAATCAGCTGCTGTCCTaGCACACCCCAGGCCGCATA | + |
Preference number: 5 (lower is better) Translates to: ASCIRNLKINLPSLSCIWNQLLS*HTPGRI Trigger: TATGCGGCCTGGGGTGTGCAAGGACAGCAGCTGATT...CCAAATGCAACTTAGGGAAGGAAGGTTTATTTTAAGATTCCTGATACAGCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CAA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAGGGTACTGCTTTGCTTaGGGGTACAGTGCTCCAGTA | + |
Preference number: 5 (lower is better) Translates to: PSPPREQYATQWHCICLTGYCFA*GYSAPV Trigger: TACTGGAGCACTGTACCCCAAAGCAAAGCAGTACCC...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTGGGTACTGCTTTGCTTaGGGGTACAGTGCTCCAGTA | + |
Preference number: 5 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAGYCFA*GYSAPV Trigger: TACTGGAGCACTGTACCCCAAAGCAAAGCAGTACCC...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTTCCCTTCCAGTTTCTTaGTGGAGGGCTGTTACTTCC | + |
Preference number: 5 (lower is better) Translates to: VGFGTPCPVHLNAIPRIASLPVS*WRAVTS Trigger: GGAAGTAACAGCCCTCCACAAAGAAACTGGAAGGGA...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACATCCCTTCCAGTTTCTTaGTGGAGGGCTGTTACTTCC | + |
Preference number: 5 (lower is better) Translates to: PSPPREQYATQWHCICLTSLPVS*WRAVTS Trigger: GGAAGTAACAGCCCTCCACAAAGAAACTGGAAGGGA...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGATCCCTTCCAGTTTCTTaGTGGAGGGCTGTTACTTCC | + |
Preference number: 5 (lower is better) Translates to: GLSLTAIDALSRHGMLSRSLPVS*WRAVTS Trigger: GGAAGTAACAGCCCTCCACAAAGAAACTGGAAGGGA...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAACCACTGTCCTCGTGTaGCTCACCCATTTAACCATG | + |
Preference number: 5 (lower is better) Translates to: GLSLTAIDALSRHGMLSRTTVLV*LTHLTM Trigger: CATGGTTAAATGGGTGAGCAACACGAGGACAGTGGT...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTACCACTGTCCTCGTGTaGCTCACCCATTTAACCATG | + |
Preference number: 5 (lower is better) Translates to: VGFGTPCPVHLNAIPRIATTVLV*LTHLTM Trigger: CATGGTTAAATGGGTGAGCAACACGAGGACAGTGGT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAATGCCGCACCGTAATTaGCTCGCTTTTACTCTGGAC | + |
Preference number: 5 (lower is better) Translates to: PSPPREQYATQWHCICLTMPHRN*LAFTLD Trigger: GTCCAGAGTAAAAGCGAGCAAATTACGGTGCGGCAT...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTATGCCGCACCGTAATTaGCTCGCTTTTACTCTGGAC | + |
Preference number: 5 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAMPHRN*LAFTLD Trigger: GTCCAGAGTAAAAGCGAGCAAATTACGGTGCGGCAT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS TCA 90 bp | AGTTGTTTCATCATAGGCCAAGATCCTTATCACTTCCCAGTTTCCTaGTGTCAGATGCCGCACCGTAATTTGCTCGCTTTTACTCTGGAC | + |
Preference number: 5 (lower is better) Translates to: SCFIIGQDPYHFPVS*CQMPHRNLLAFTLD Trigger: GTCCAGAGTAAAAGCGAGCAAATTACGGTGCGGCATCTGACATCAGGAAACTGGGAAGTGATAAGGATCTTGGCCTATGATGAAACAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGACTTATCTGTCACCATTaGGCCTCCTGGTTCTTCATC | + |
Preference number: 5 (lower is better) Translates to: GLSLTAIDALSRHGMLSRLICHH*ASWFFI Trigger: GATGAAGAACCAGGAGGCCAAATGGTGACAGATAAG...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACACTTATCTGTCACCATTaGGCCTCCTGGTTCTTCATC | + |
Preference number: 5 (lower is better) Translates to: PSPPREQYATQWHCICLTLICHH*ASWFFI Trigger: GATGAAGAACCAGGAGGCCAAATGGTGACAGATAAG...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTAAGTGCTTTCTTCCTTaGATGGCATGCCAAGGTACC | + |
Preference number: 5 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAKCFLP*MACQGT Trigger: GGTACCTTGGCATGCCATCAAAGGAAGAAAGCACTT...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAAAGTGCTTTCTTCCTTaGATGGCATGCCAAGGTACC | + |
Preference number: 5 (lower is better) Translates to: PSPPREQYATQWHCICLTKCFLP*MACQGT Trigger: GGTACCTTGGCATGCCATCAAAGGAAGAAAGCACTT...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS TCA 90 bp | GAATTGTTTTCCAAGAGGAAATACCTTGATGGGTTGTCTGTGATGTaGAGGCTGACCACTGGGACCTTTGGACCTTCACAGAATAACAAG | + |
Preference number: 5 (lower is better) Translates to: ELFSKRKYLDGLSVM*RLTTGTFGPSQNNK Trigger: CTTGTTATTCTGTGAAGGTCCAAAGGTCCCAGTGGTCAGCCTTCACATCACAGACAACCCATCAAGGTATTTCCTCTTGGAAAACAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CCA 90 bp | ACCGTAATTTGCTCGCTTTTACTCTGGACCAGGAACATAGCTATGTaGTGGAATTCTCCTCTTCCACCTTGTTTAACAGGAACAGTCATG | + |
Preference number: 5 (lower is better) Translates to: TVICSLLLWTRNIAM*WNSPLPPCLTGTVM Trigger: CATGACTGTTCCTGTTAAACAAGGTGGAAGAGGAGAATTCCACCACATAGCTATGTTCCTGGTCCAGAGTAAAAGCGAGCAAATTACGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAACTTATCTGTCACCATTaGGCCTCCTGGTTCTTCATC | + |
Preference number: 5 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKLICHH*ASWFFI Trigger: GATGAAGAACCAGGAGGCCAAATGGTGACAGATAAG...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS TCA 90 bp | TTATATACCACGACTGTATCATTGATCCACCGAGGTTCTGGATTATaGAGTCCGAATCCTTTCCCCAAAAGCTCCTCTAGTGACAGTCTT | + |
Preference number: 5 (lower is better) Translates to: LYTTTVSLIHRGSGL*SPNPFPKSSSSDSL Trigger: AAGACTGTCACTAGAGGAGCTTTTGGGGAAAGGATTCGGACTTCATAATCCAGAACCTCGGTGGATCAATGATACAGTCGTGGTATATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS TCA 90 bp | CTGACCACTGGGACCTTTGGACCTTCACAGAATAACAAGAAATGTTaGTTCATGGGGCTAAAGCTGGCATCAAAATACGTGCAATCTTCT | + |
Preference number: 5 (lower is better) Translates to: LTTGTFGPSQNNKKC*FMGLKLASKYVQSS Trigger: AGAAGATTGCACGTATTTTGATGCCAGCTTTAGCCCCATGAATCAACATTTCTTGTTATTCTGTGAAGGTCCAAAGGTCCCAGTGGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS GCA 90 bp | CTTTTAAACCATGAATGTTATGCAGTACACTGGATGCCTGGTAAGTaGTTTCTTCCTTTGATGGCATGCCAAGGTACCGTTCAGAGAAAG | + |
Preference number: 5 (lower is better) Translates to: LLNHECYAVHWMPGK*FLPLMACQGTVQRK Trigger: CTTTCTCTGAACGGTACCTTGGCATGCCATCAAAGGAAGAAAGCACTTACCAGGCATCCAGTGTACTGCATAACATTCATGGTTTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CCA 90 bp | GTAATTTGCTCGCTTTTACTCTGGACCAGGAACATAGCTATGTGGTaGAATTCTCCTCTTCCACCTTGTTTAACAGGAACAGTCATGAAG | + |
Preference number: 5 (lower is better) Translates to: VICSLLLWTRNIAMW*NSPLPPCLTGTVMK Trigger: CTTCATGACTGTTCCTGTTAAACAAGGTGGAAGAGGAGAATTCCACCACATAGCTATGTTCCTGGTCCAGAGTAAAAGCGAGCAAATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTAGGGTACTGCTTTGCTTaGGGGTACAGTGCTCCAGTA | + |
Preference number: 5 (lower is better) Translates to: NNSFNILAKTTSLISALLGYCFA*GYSAPV Trigger: TACTGGAGCACTGTACCCCAAAGCAAAGCAGTACCC...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CAA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACATTCTCCTCTTCCACCTaGTTTAACAGGAACAGTCAT | + |
Preference number: 5 (lower is better) Translates to: PSPPREQYATQWHCICLTFSSST*FNRNSH Trigger: ATGACTGTTCCTGTTAAACAAGGTGGAAGAGGAGAA...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGATTCTCCTCTTCCACCTaGTTTAACAGGAACAGTCAT | + |
Preference number: 5 (lower is better) Translates to: GLSLTAIDALSRHGMLSRFSSST*FNRNSH Trigger: ATGACTGTTCCTGTTAAACAAGGTGGAAGAGGAGAA...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACAACCACGGCTCCACATTaGAAAAACTTCTCATCTGAT | + |
Preference number: 5 (lower is better) Translates to: PSPPREQYATQWHCICLTTTAPH*KNFSSD Trigger: ATCAGATGAGAAGTTTTTCAAATGTGGAGCCGTGGT...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAGCTGGAAATGAACTTTaGTATCAGCAGTTCCGTGAA | + |
Preference number: 5 (lower is better) Translates to: GLSLTAIDALSRHGMLSRAGNEL*YQQFRE Trigger: TTCACGGAACTGCTGATACAAAAGTTCATTTCCAGC...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTGCTGGAAATGAACTTTaGTATCAGCAGTTCCGTGAA | + |
Preference number: 5 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAAGNEL*YQQFRE Trigger: TTCACGGAACTGCTGATACAAAAGTTCATTTCCAGC...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS TCA 90 bp | AATAGTTTCTTTCATCACAGAATTGTTTTCCAAGAGGAAATACCTTaGTGGGTTGTCTGTGATGTGAAGGCTGACCACTGGGACCTTTGG | + |
Preference number: 5 (lower is better) Translates to: NSFFHHRIVFQEEIP*WVVCDVKADHWDLW Trigger: CCAAAGGTCCCAGTGGTCAGCCTTCACATCACAGACAACCCATCAAGGTATTTCCTCTTGGAAAACAATTCTGTGATGAAAGAAACTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAAACCACGGCTCCACATTaGAAAAACTTCTCATCTGAT | + |
Preference number: 5 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKTTAPH*KNFSSD Trigger: ATCAGATGAGAAGTTTTTCAAATGTGGAGCCGTGGT...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CAA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGAGCTTTTATCAGATGCTaGATCAATTCTGCTGAATGC | + |
Preference number: 5 (lower is better) Translates to: GLSLTAIDALSRHGMLSRAFIRC*INSAEC Trigger: GCATTCAGCAGAATTGATCAAGCATCTGATAAAAGC...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GGGCTTAGTTTAACAGCAATAGATGCATTGAGCAGGCATGGAATGCTGAGTAGACCTCTAGTGACAGTCTaGTTTCTGAAGAATTTGTTA | + |
Preference number: 5 (lower is better) Translates to: GLSLTAIDALSRHGMLSRPLVTV*FLKNLL Trigger: TAACAAATTCTTCAGAAACAAGACTGTCACTAGAGG...TCTACTCAGCATTCCATGCCTGCTCAATGCATCTATTGCTGTTAAACTAAGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTCCTCTAGTGACAGTCTaGTTTCTGAAGAATTTGTTA | + |
Preference number: 5 (lower is better) Translates to: VGFGTPCPVHLNAIPRIAPLVTV*FLKNLL Trigger: TAACAAATTCTTCAGAAACAAGACTGTCACTAGAGG...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTACCACTGTCCTCGTGTaGCTCACCCATTTAACCATG | + |
Preference number: 5 (lower is better) Translates to: HLFHSLTQLKEECCEFRTTTVLV*LTHLTM Trigger: CATGGTTAAATGGGTGAGCAACACGAGGACAGTGGT...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CAA 90 bp | CATTTATTCCACAGTTTAACCCAACTTAAGGAAGAATGCTGTGAATTCAGAACTATGCCGCACCGTAATTaGCTCGCTTTTACTCTGGAC | + |
Preference number: 5 (lower is better) Translates to: HLFHSLTQLKEECCEFRTMPHRN*LAFTLD Trigger: GTCCAGAGTAAAAGCGAGCAAATTACGGTGCGGCAT...AGTTCTGAATTCACAGCATTCTTCCTTAAGTTGGGTTAAACTGTGGAATAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS-3UTR CAA 90 bp | CCTTCTCCACCAAGAGAGCAATATGCCACTCAGTGGCATTGCATTTGTTTAACATCTTCTTTCATAAAGTaGCATGAGATGCAATCACGA | + |
Preference number: 5 (lower is better) Translates to: PSPPREQYATQWHCICLTSSFIK*HEMQSR Trigger: TCGTGATTGCATCTCATGCAACTTTATGAAAGAAGA...TGTTAAACAAATGCAATGCCACTGAGTGGCATATTGCTCTCTTGGTGGAGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTTCTTCTTTCATAAAGTaGCATGAGATGCAATCACGA | + |
Preference number: 5 (lower is better) Translates to: VGFGTPCPVHLNAIPRIASSFIK*HEMQSR Trigger: TCGTGATTGCATCTCATGCAACTTTATGAAAGAAGA...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | GTAGGATTTGGTACCCCGTGTCCTGTCCATTTAAATGCAATACCACGTATTGCTCTGATTTTAAGATCATaGATGCAATATAGCCCCCAT | + |
Preference number: 5 (lower is better) Translates to: VGFGTPCPVHLNAIPRIALILRS*MQYSPH Trigger: ATGGGGGCTATATTGCATCAATGATCTTAAAATCAG...AGCAATACGTGGTATTGCATTTAAATGGACAGGACACGGGGTACCAAATCCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | TATTCTCCTGCAGGTGGTGTAAAAGGACACCCTGGAAATCTGCACAAAGAAAAAGCTTTTATCAGATGCTaGATCAATTCTGCTGAATGC | + |
Preference number: 5 (lower is better) Translates to: YSPAGGVKGHPGNLHKEKAFIRC*INSAEC Trigger: GCATTCAGCAGAATTGATCAAGCATCTGATAAAAGC...TTTTTCTTTGTGCAGATTTCCAGGGTGTCCTTTTACACCACCTGCAGGAGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS TCA 90 bp | TATTCTCTTGATTTAAAAATGTCGGGTGGCATCAGCTCCAAAGTATaGGTTGGTCCATACAGGTTTACAACATATAACTTCACTGATGGG | + |
Preference number: 5 (lower is better) Translates to: YSLDLKMSGGISSKV*VGPYRFTTYNFTDG Trigger: CCCATCAGTGAAGTTATATGTTGTAAACCTGTATGGACCAACTCATACTTTGGAGCTGATGCCACCCGACATTTTTAAATCAAGAGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | TTCTGTTGTATGAGGACATTTCAAGACCAATCAACATGCAAAAGCTGGAGTGAGCTGATTTTAAGATCATaGATGCAATATAGCCCCCAT | + |
Preference number: 5 (lower is better) Translates to: FCCMRTFQDQSTCKSWSELILRS*MQYSPH Trigger: ATGGGGGCTATATTGCATCAATGATCTTAAAATCAG...CTCACTCCAGCTTTTGCATGTTGATTGGTCTTGAAATGTCCTCATACAACAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS TCA 90 bp | GAAGAATCTGAGAATTGTGCTGTAAAAATGATGCTTGCTCTTGTCTaGAATGTGATATCCTTCATCTGGATAGACCTGCAGAGTGTAATT | + |
Preference number: 5 (lower is better) Translates to: EESENCAVKMMLALV*NVISFIWIDLQSVI Trigger: AATTACACTCTGCAGGTCTATCCAGATGAAGGATATCACATTTCAGACAAGAGCAAGCATCATTTTTACAGCACAATTCTCAGATTCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | ACCATAGAGAACAACAGAGCAACAGAACCTCCTTTATGTAATTTGAAAGTGAAAGCTGGAAATGAACTTTaGTATCAGCAGTTCCGTGAA | + |
Preference number: 5 (lower is better) Translates to: TIENNRATEPPLCNLKVKAGNEL*YQQFRE Trigger: TTCACGGAACTGCTGATACAAAAGTTCATTTCCAGC...TTTCACTTTCAAATTACATAAAGGAGGTTCTGTTGCTCTGTTGTTCTCTATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS CCA 90 bp | ATTTGGCCTCCTGGTTCTTCATCCATTATTAATAGAAGAGCATACTaGTTTTTCTCCATAAAATCTTTGGGAAAGGACAACTGTAAAGGA | + |
Preference number: 5 (lower is better) Translates to: IWPPGSSSIINRRAY*FFSIKSLGKDNCKG Trigger: TCCTTTACAGTTGTCCTTTCCCAAAGATTTTATGGAGAAAAACCAGTATGCTCTTCTATTAATAATGGATGAAGAACCAGGAGGCCAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS-3UTR CAA 90 bp | AATAATTCTTTCAATATCTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTACCTCTAGTGACAGTCTaGTTTCTGAAGAATTTGTTA | + |
Preference number: 5 (lower is better) Translates to: NNSFNILAKTTSLISALLPLVTV*FLKNLL Trigger: TAACAAATTCTTCAGAAACAAGACTGTCACTAGAGG...TAGGAGGGCACTGATGAGGCTTGTTGTCTTTGCTAAGATATTGAAAGAATTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS GCA 90 bp | AGGAAGTTCATAGTCATCAATGTGAAGTATTCTAGTCTCTCTCTTTaGGAGCTTCTTCTTCTGAATAGTTTCTTTCATCACAGAATTGTT | + |
Preference number: 5 (lower is better) Translates to: RKFIVINVKYSSLSL*ELLLLNSFFHHRIV Trigger: AACAATTCTGTGATGAAAGAAACTATTCAGAAGAAGAAGCTCGCAAAGAGAGAGACTAGAATACTTCACATTGATGACTATGAACTTCCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CCA 72 bp | CTAGTTCCTGGTCGGCTGGCTGCGACTGGGTTGCCCTaGCCCCTGGGGTGGGTTGCTGCTCCTGCTTCATGG | + |
Preference number: 6 (lower is better) Translates to: LVPGRLAATGLP*PLGWVAAPASW Trigger: CCATGAAGCAGGAGCAGCAACCCACCCCAGGGGCCAGGGCAACCCAGTCGCAGCCAGCCGACCAGGAACTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS CCA 72 bp | CTGTTACTTCCTAGTTCCTGGTCGGCTGGCTGCGACTaGGTTGCCCTGGCCCCTGGGGTGGGTTGCTGCTCC | + |
Preference number: 6 (lower is better) Translates to: LLLPSSWSAGCD*VALAPGVGCCS Trigger: GGAGCAGCAACCCACCCCAGGGGCCAGGGCAACCCAGTCGCAGCCAGCCGACCAGGAACTAGGAAGTAACAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS CAA 72 bp | TACTTCCTAGTTCCTGGTCGGCTGGCTGCGACTGGGTaGCCCTGGCCCCTGGGGTGGGTTGCTGCTCCTGCT | + |
Preference number: 6 (lower is better) Translates to: YFLVPGRLAATG*PWPLGWVAAPA Trigger: AGCAGGAGCAGCAACCCACCCCAGGGGCCAGGGCAACCCAGTCGCAGCCAGCCGACCAGGAACTAGGAAGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS CAA 90 bp | GAGGGCTGTTACTTCCTAGTTCCTGGTCGGCTGGCTGCGACTGGGTaGCCCTGGCCCCTGGGGTGGGTTGCTGCTCCTGCTTCATGGCTG | + |
Preference number: 6 (lower is better) Translates to: EGCYFLVPGRLAATG*PWPLGWVAAPASWL Trigger: CAGCCATGAAGCAGGAGCAGCAACCCACCCCAGGGGCCAGGGCAACCCAGTCGCAGCCAGCCGACCAGGAACTAGGAAGTAACAGCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112606.8 |
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CDS TCA 72 bp | CTGTCCTTGCACACCCCAGGCCGCATACTGCAACACTaGGTCCTCAACTTCTGGGGGATTCAACTCCCACAC | + |
Preference number: 6 (lower is better) Translates to: LSLHTPGRILQH*VLNFWGIQLPH Trigger: GTGTGGGAGTTGAATCCCCCAGAAGTTGAGGACTCAGTGTTGCAGTATGCGGCCTGGGGTGTGCAAGGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS GCA 72 bp | CCAGGTGTCGGACGTCATCTCATATTTCCTGCTGCATaGCCCGGTGGTAGATTCACAGAGTGTGAGGATGGA | + |
Preference number: 6 (lower is better) Translates to: PGVGRHLIFPAA*PGGRFTECEDG Trigger: TCCATCCTCACACTCTGTGAATCTACCACCGGGGCATGCAGCAGGAAATATGAGATGACGTCCGACACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS GCA 72 bp | GTTCGCTTGACCTGCCTTGGGGTATGGGTACTGCTTTaGTTTGGGGTACAGTGCTCCAGTAAACCGAGGTAT | + |
Preference number: 6 (lower is better) Translates to: VRLTCLGVWVLL*FGVQCSSKPRY Trigger: ATACCTCGGTTTACTGGAGCACTGTACCCCAAAGCAAAGCAGTACCCATACCCCAAGGCAGGTCAAGCGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS TCA 72 bp | TCCAAGAGGAAATACCTTGATGGGTTGTCTGTGATGTaGAGGCTGACCACTGGGACCTTTGGACCTTCACAG | + |
Preference number: 6 (lower is better) Translates to: SKRKYLDGLSVM*RLTTGTFGPSQ Trigger: CTGTGAAGGTCCAAAGGTCCCAGTGGTCAGCCTTCACATCACAGACAACCCATCAAGGTATTTCCTCTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS TCA 72 bp | ACTTGGTCCTTTGCCTCCACTGAGCCTATCCTTCTGTaGATCTCCTGCAAAACTTTCAGGCCCTGGAATCCA | + |
Preference number: 6 (lower is better) Translates to: TWSFASTEPILL*ISCKTFRPWNP Trigger: TGGATTCCAGGGCCTGAAAGTTTTGCAGGAGATTCACAGAAGGATAGGCTCAGTGGAGGCAAAGGACCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS GCA 72 bp | CTTGGGGTATGGGTACTGCTTTGCTTTGGGGTACAGTaGTCCAGTAAACCGAGGTATGATCATGTTAGGCAC | + |
Preference number: 6 (lower is better) Translates to: LGVWVLLCFGVQ*SSKPRYDHVRH Trigger: GTGCCTAACATGATCATACCTCGGTTTACTGGAGCACTGTACCCCAAAGCAAAGCAGTACCCATACCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CCA 72 bp | CATATAACTTCACTGATGGGTTCGCTTGACCTGCCTTaGGGTATGGGTACTGCTTTGCTTTGGGGTACAGTG | + |
Preference number: 6 (lower is better) Translates to: HITSLMGSLDLP*GMGTALLWGTV Trigger: CACTGTACCCCAAAGCAAAGCAGTACCCATACCCCAAGGCAGGTCAAGCGAACCCATCAGTGAAGTTATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS GCA 72 bp | TCCCAGTTTCCTGATGTCAGATGCCGCACCGTAATTTaGTCGCTTTTACTCTGGACCAGGAACATAGCTATG | + |
Preference number: 6 (lower is better) Translates to: SQFPDVRCRTVI*SLLLWTRNIAM Trigger: CATAGCTATGTTCCTGGTCCAGAGTAAAAGCGAGCAAATTACGGTGCGGCATCTGACATCAGGAAACTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CCA 72 bp | AGTCATGAAGAACTTGCTTCCATCTCTGGAAAACACTaGCTCCTCGTTCTGTTTAGAGAGCCAGGTGTCGGA | + |
Preference number: 6 (lower is better) Translates to: SHEELASISGKH*LLVLFREPGVG Trigger: TCCGACACCTGGCTCTCTAAACAGAACGAGGAGCCAGTGTTTTCCAGAGATGGAAGCAAGTTCTTCATGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CAA 90 bp | GAATGTTATGCAGTACACTGGATGCCTGGTAAGTGCTTTCTTCCTTaGATGGCATGCCAAGGTACCGTTCAGAGAAAGCTGAGGCATACA | + |
Preference number: 6 (lower is better) Translates to: ECYAVHWMPGKCFLP*MACQGTVQRKLRHT Trigger: TGTATGCCTCAGCTTTCTCTGAACGGTACCTTGGCATGCCATCAAAGGAAGAAAGCACTTACCAGGCATCCAGTGTACTGCATAACATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS GCA 72 bp | AAGATCCTTATCACTTCCCAGTTTCCTGATGTCAGATaGCGCACCGTAATTTGCTCGCTTTTACTCTGGACC | + |
Preference number: 6 (lower is better) Translates to: KILITSQFPDVR*RTVICSLLLWT Trigger: GGTCCAGAGTAAAAGCGAGCAAATTACGGTGCGGCATCTGACATCAGGAAACTGGGAAGTGATAAGGATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS TCA 72 bp | AGGTTTACAACATATAACTTCACTGATGGGTTCGCTTaGCCTGCCTTGGGGTATGGGTACTGCTTTGCTTTG | + |
Preference number: 6 (lower is better) Translates to: RFTTYNFTDGFA*PALGYGYCFAL Trigger: CAAAGCAAAGCAGTACCCATACCCCAAGGCAGGTCAAGCGAACCCATCAGTGAAGTTATATGTTGTAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS GCA 72 bp | CATGAATGTTATGCAGTACACTGGATGCCTGGTAAGTaGTTTCTTCCTTTGATGGCATGCCAAGGTACCGTT | + |
Preference number: 6 (lower is better) Translates to: HECYAVHWMPGK*FLPLMACQGTV Trigger: AACGGTACCTTGGCATGCCATCAAAGGAAGAAAGCACTTACCAGGCATCCAGTGTACTGCATAACATTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CCA 72 bp | ATATACCACGACTGTATCATTGATCCACCGAGGTTCTaGATTATGAAGTCCGAATCCTTTCCCCAAAAGCTC | + |
Preference number: 6 (lower is better) Translates to: IYHDCIIDPPRF*IMKSESFPQKL Trigger: GAGCTTTTGGGGAAAGGATTCGGACTTCATAATCCAGAACCTCGGTGGATCAATGATACAGTCGTGGTATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CCA 72 bp | TCGCTTTTACTCTGGACCAGGAACATAGCTATGTGGTaGAATTCTCCTCTTCCACCTTGTTTAACAGGAACA | + |
Preference number: 6 (lower is better) Translates to: SLLLWTRNIAMW*NSPLPPCLTGT Trigger: TGTTCCTGTTAAACAAGGTGGAAGAGGAGAATTCCACCACATAGCTATGTTCCTGGTCCAGAGTAAAAGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS TCA 72 bp | ATATTTTACAGCAGCTACTTGGTCCTTTGCCTCCACTaGGCCTATCCTTCTGTGAATCTCCTGCAAAACTTT | + |
Preference number: 6 (lower is better) Translates to: IFYSSYLVLCLH*AYPSVNLLQNF Trigger: AAAGTTTTGCAGGAGATTCACAGAAGGATAGGCTCAGTGGAGGCAAAGGACCAAGTAGCTGCTGTAAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CAA 72 bp | GTTTCAGTAAATATTTTACAGCAGCTACTTGGTCCTTaGCCTCCACTGAGCCTATCCTTCTGTGAATCTCCT | + |
Preference number: 6 (lower is better) Translates to: VSVNILQQLLGP*PPLSLSFCESP Trigger: AGGAGATTCACAGAAGGATAGGCTCAGTGGAGGCAAAGGACCAAGTAGCTGCTGTAAAATATTTACTGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS TCA 72 bp | GTCCATTGTTGGTTTTATATACCACGACTGTATCATTaGTCCACCGAGGTTCTGGATTATGAAGTCCGAATC | + |
Preference number: 6 (lower is better) Translates to: VHCWFYIPRLYH*STEVLDYEVRI Trigger: GATTCGGACTTCATAATCCAGAACCTCGGTGGATCAATGATACAGTCGTGGTATATAAAACCAACAATGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CAA 90 bp | GGGCTAAAGCTGGCATCAAAATACGTGCAATCTTCTTTCATAAAGTaGCATGAGATGCAATCACGATTCAATAGTCCCTCAGTAGAAGCA | + |
Preference number: 6 (lower is better) Translates to: GLKLASKYVQSSFIK*HEMQSRFNSPSVEA Trigger: TGCTTCTACTGAGGGACTATTGAATCGTGATTGCATCTCATGCAACTTTATGAAAGAAGATTGCACGTATTTTGATGCCAGCTTTAGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CAA 90 bp | AATGTGGAAGCATTTGATTCTGTATTCAGTTTCATGACGTGTCCATaGTTGGTTTTATATACCACGACTGTATCATTGATCCACCGAGGT | + |
Preference number: 6 (lower is better) Translates to: NVEAFDSVFSFMTCP*LVLYTTTVSLIHRG Trigger: ACCTCGGTGGATCAATGATACAGTCGTGGTATATAAAACCAACAATGGACACGTCATGAAACTGAATACAGAATCAAATGCTTCCACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CAA 90 bp | GGGGAAAGTGAGTGTCTGGAGGCTTTAAACGTTACAAAAGTTGAGTaGTCCAATAACAATGTGGAAGCATTTGATTCTGTATTCAGTTTC | + |
Preference number: 6 (lower is better) Translates to: GESECLEALNVTKVE*SNNNVEAFDSVFSF Trigger: GAAACTGAATACAGAATCAAATGCTTCCACATTGTTATTGGACAACTCAACTTTTGTAACGTTTAAAGCCTCCAGACACTCACTTTCCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS TCA 72 bp | GATTTAAAAATGTCGGGTGGCATCAGCTCCAAAGTATaGGTTGGTCCATACAGGTTTACAACATATAACTTC | + |
Preference number: 6 (lower is better) Translates to: DLKMSGGISSKV*VGPYRFTTYNF Trigger: GAAGTTATATGTTGTAAACCTGTATGGACCAACTCATACTTTGGAGCTGATGCCACCCGACATTTTTAAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS TCA 72 bp | ACAATGTGGAAGCATTTGATTCTGTATTCAGTTTCATaGCGTGTCCATTGTTGGTTTTATATACCACGACTG | + |
Preference number: 6 (lower is better) Translates to: TMWKHLILYSVS*RVHCWFYIPRL Trigger: CAGTCGTGGTATATAAAACCAACAATGGACACGTCATGAAACTGAATACAGAATCAAATGCTTCCACATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS GCA 72 bp | ATAGTCATCAATGTGAAGTATTCTAGTCTCTCTCTTTaGGAGCTTCTTCTTCTGAATAGTTTCTTTCATCAC | + |
Preference number: 6 (lower is better) Translates to: IVINVKYSSLSL*ELLLLNSFFHH Trigger: GTGATGAAAGAAACTATTCAGAAGAAGAAGCTCGCAAAGAGAGAGACTAGAATACTTCACATTGATGACTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |
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CDS CAA 72 bp | GCATTTGATTCTGTATTCAGTTTCATGACGTGTCCATaGTTGGTTTTATATACCACGACTGTATCATTGATC | + |
Preference number: 6 (lower is better) Translates to: AFDSVFSFMTCP*LVLYTTTVSLI Trigger: GATCAATGATACAGTCGTGGTATATAAAACCAACAATGGACACGTCATGAAACTGAATACAGAATCAAATGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112603.4 ENSMUST00000112606.8 ENSMUST00000239072.2 |